Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0007396

Physical Location & Seq

Genomic Coordinates Forward (+)

66426813 .. 66431324

Gene Structure 4512 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00274800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

ATGGCGAATTGGATCTCCTCCAAACTCAGAGCCGCCGAGACCATCCTCCAACAGATCGATCAGCAAGCGGCGGAGTCGTTACGGAAAAACGAGAAGCCTATCGCCGACGACGACTTGAAGTTGGGCGCTCCGGCGAAAACTGGAGGCAGTGTGCCTCTGAAGGACCAGTTGAAGAAGAAAACCCTAGAAAATAGTGATTATAGAGGAAAATTAAGGAGCGATCCGAGCTTTAGCAATGTTAATAGCAGCAATTATAGTAGTAGTGGTAATGAAAAAAGTAGTAGTAATAATAAGGATAAAGAGATTGTTGGAAAGGCGAAATCCGAGCCTCTTAATGATAGTGACTGGACTCAACTTCTCAGTGCACCGAAGCCGGCAGCTGCTACTTCTACATCGAGCCGTGGCAATGGTTTGCCTGCTGTTCGGGGTTTGAGGAGGGATGGTAGGAGGCAGGGCAGTGCAGCTTCTGCTTCGAATTTGGAGGTTAAGAAGAATCAGAAGAGCGGGAGTGCTAACAATGCTATGAAGTCGGTGCAGAGAGCAGGTGTTGGGGAAGGTAGGAAGTTGAATGGGAGAGTGAGTGATGGGGAGGAGTCTGGTATTCTGGATTCAGCACGGAGGTTTTCCACTGGTGAATTGAAGAGTGATGGTAAGGTTATGGAAGGAGGTGAGTTGGATTATAGGGATGTGGGAGTGGACACTTCGGTTGAAATAAAAGGTAAGGCAAATGAAGAAAAGGGCGGAGCTTTTGATACGAAGGAGCTTTCATTGGAGGGTCGTCTAGAGTCAGTAAAGAAAAATGAAGGGTTGTCTGACAAGAAGATTGGAGAGCAGAGTATGAACGATCAGTTGAGAAGCAGTACTGTCAGGGGTAAGCATGAGCCCAGTGAAACTGCTAGGAGTTCTACCTCTGAAGACTTAAAGAGAGGTTTTACTTCAGTAACTGATGGCAGCTCTGAGTCTGACTCAGATTCTGGTTCAAGTTCTGATTCTGAAATTGAGCGTGAGAAGGAGGAAAGGAGAAAGCAGAGACAGAAGATTCTAGCTGAGAAAGCAGCAGCTAAAGCTGTGGAGGCCATTAAAGAGAAGGAAAATACGGTTGCCAGATTGGAAGGGGAGAAGCAGAGCTTGGAGAAAATACTTGAAGTTCAAGTGAAGCAACAAGCACAAGAGGCTTCAAAGCTACAAATGACGATGATGGAAACCATGGAAGCGGCTGATATAGAGAAGCAGAAACATAATAGTACTAGAATGGAAGCCTTTGTGCGTTTGGCTAAACTTGAGACTGCAAATGCTGACCTTGCGAAATCCCTAGCCACTGTGCAGTGGAATCTCGAACAGGAGGTCAATCATGTAGCAGAACTTCGACAGCAAGTTGAATTAAAAGAAGTTAGCCATGAAGAACTCAGGAGGAAGATCTCTGATGCTCATCAGATCGAAATATCTTTAAAGAAAGTAGCGGCTCCAAAAGGACTTGAACTTGAGCGAGAGATTTTGGAGGCAGAGTATGCTATTGTAACTGATAAAGTTACACGACTGCAAGATAAGGCAAAGAAGCTGGAAGCAGACATTGAAATGACAAGGAAAGATATAGAGGATCCAACGGATATAGAAATTGAGCTCCAGCGAAGACTTTCTCAGATGACTGACCATTTGATTCAGAAACAAGCCCAGGTTGAGGCTCTCTCCTCAGAAAAGGCAACTCTTCAATTCAGAATTGAGGCAGTCTCAAGGTTGCTAGATGAAGGCAAATCAATGACCGAATTTTCTGCTACGTCATCAACGGACATTGAATCAGGCAGGCCACTTTTTGAAGACAGAATCCGTTCAGGCCGGGAGCACCTAGGTTCATTGCTTCAGCAATTGGACTCCATTTTCATGGCCGGAGCAGTGTTTTTAAGGAGGAACACGACTGCAAGATTATGGTCCCTAGTGTACTTTATTTGCCTCCATTTCTGGGTAATTTATATTCTTATGTCCCATTCTCAACCATCAAATGAGATCAAATCTGGGGCGGTGATGTCGTTGGAAAACATTAATAACAACACTTCCGGTGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0000301 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005795 GO:0006810 GO:0006891 GO:0006996 GO:0007030 GO:0008150 GO:0009987 GO:0010256 GO:0012505 GO:0016020 GO:0016043 GO:0016192 GO:0031090 GO:0031984 GO:0031985 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048193 GO:0051179 GO:0051234 GO:0071840 GO:0098588 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Golgin_A5

Protein Analysis

686

Amino Acids

75.88

Weight (kDa)

6.18

Isoelectric Point (pI)

49.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Golgin_A5	PF09787	497 - 661	1.6e-17	Golgin subfamily A member 5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007396)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18190
fragaria_vesca	FvH4_5g17221 FvH4_5g17221 FvH4_5g17221 FvH4_5g17221 FvH4_5g17221
malus_domestica	MD06G1230800.v1.1 MD14G1235400.v1.1
prunus_persica	Prupe.5G232100_v2.0.a1 Prupe.7G033500_v2.0.a1
pyrus_communis	pycom06g20200
rosa_chinensis	RchiOBHm_Chr7g0178571
rosa_laevigata	RLG00000005436 RLG00000013860
rosa_multiflora	Rmu_co8125946.1_g000001 Rmu_sc0012505.1_g000003 Rmu_sc0021447.1_g000002
rosa_roxburghii	Rroxscaffold_3G00274800
rosa_rugosa	Rorug06G0418000
rosa_samantha	Rh5AG530000 Rh7AG016700 Rh7BG016200 Rh7CG016900 Rh7DG016800
rosa_wichuraiana	Rw7G001330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	533
Acc36I	ACCTGC	1 cut(s)	533
AccBSI	CCGCTC	1 cut(s)	504
AciI	CCGC	8 cut(s)	33, 68, 71, 504, 741, 1214, 1460, 2015
AclWI	GGATC	4 cut(s)	20, 215, 1592, 1605
AcoI	YGGCCR	1 cut(s)	1881
AcsI	RAATTY	2 cut(s)	475, 1763
AcuI	CTGAAG	4 cut(s)	179, 921, 933, 1841
AfaI	GTAC	3 cut(s)	862, 1246, 1937
AfiI	CCNNNNNNNGG	2 cut(s)	1678, 1957
AjnI	CCWGG	1 cut(s)	1671
AjuI	GAANNNNNNNTTGG	2 cut(s)	1112, 1144
Alw21I	GWGCWC	3 cut(s)	367, 1623, 1842
Alw26I	GTCTC	4 cut(s)	32, 1024, 1277, 1732
Alw44I	GTGCAC	1 cut(s)	363
AlwI	GGATC	4 cut(s)	20, 215, 1592, 1605
AlwNI	CAGNNNCTG	3 cut(s)	467, 944, 974
AoxI	GGCC	4 cut(s)	1074, 1802, 1831, 1881
ApaLI	GTGCAC	1 cut(s)	363
ApeKI	GCWGC	7 cut(s)	246, 377, 380, 461, 951, 1055, 1058
ApoI	RAATTY	2 cut(s)	475, 1763
ArsI	GACNNNNNNTTYG	4 cut(s)	1329, 1361, 1636, 1668
AseI	ATTAAT	1 cut(s)	2037
Asp700I	GAANNNNTTC	2 cut(s)	1633, 1825
AspA2I	CCTAGG	1 cut(s)	1843
AspLEI	GCGC	1 cut(s)	128
AspS9I	GGNCC	2 cut(s)	163, 1926
AsuC2I	CCSGG	1 cut(s)	1835
AsuHPI	GGTGA	3 cut(s)	644, 680, 2029
AsuII	TTCGAA	1 cut(s)	473
AvaII	GGWCC	2 cut(s)	163, 1926
AvrII	CCTAGG	1 cut(s)	1843
BaeGI	GKGCMC	1 cut(s)	367
BamHI	GGATCC	1 cut(s)	1597
BanII	GRGCYC	2 cut(s)	885, 1623
BarI	GAAGNNNNNNTAC	2 cut(s)	1347, 1379
BbsI	GAAGAC	3 cut(s)	921, 1636, 1821
Bbv12I	GWGCWC	3 cut(s)	367, 1623, 1842
BbvI	GCAGC	7 cut(s)	258, 367, 389, 473, 963, 1067, 1070
BccI	CCATC	7 cut(s)	50, 434, 578, 641, 941, 1192, 1999
BceAI	ACGGC	1 cut(s)	384
BcgI	CGANNNNNNTGC	2 cut(s)	1751, 1785
BciT130I	CCWGG	1 cut(s)	1673
BcnI	CCSGG	1 cut(s)	1835
BcoDI	GTCTC	4 cut(s)	32, 1024, 1277, 1732
BfaI	CTAG	9 cut(s)	185, 782, 897, 1043, 1248, 1313, 1739, 1844, 1931
BfoI	RGCGCY	1 cut(s)	129
BfuAI	ACCTGC	1 cut(s)	533
BglII	AGATCT	1 cut(s)	1416
BlnI	CCTAGG	1 cut(s)	1843
BmcAI	AGTACT	2 cut(s)	862, 1246
Bme1390I	CCNGG	2 cut(s)	1673, 1835
Bme18I	GGWCC	2 cut(s)	163, 1926
BmgT120I	GGNCC	2 cut(s)	163, 1926
BmiI	GGNNCC	3 cut(s)	1464, 1599, 1928
BmrFI	CCNGG	2 cut(s)	1673, 1835
BmrI	ACTGGG	1 cut(s)	879
BmsI	GCATC	1 cut(s)	1414
BmuI	ACTGGG	1 cut(s)	879
BpiI	GAAGAC	3 cut(s)	921, 1636, 1821
BplI	GAGNNNNNCTC	6 cut(s)	950, 982, 1670, 1702, 1712, 1744
BpmI	CTGGAG	2 cut(s)	162, 1607
Bpu14I	TTCGAA	1 cut(s)	473
BpuEI	CTTGAG	3 cut(s)	1301, 1502, 1714
BpuMI	CCSGG	1 cut(s)	1835
Bsa29I	ATCGAT	1 cut(s)	57
BsaBI	GATNNNNATC	1 cut(s)	1428
BsaI	GGTCTC	1 cut(s)	32
BsaJI	CCNNGG	4 cut(s)	400, 1206, 1671, 1843
BsaWI	WCCGGW	1 cut(s)	2051
BsaXI	ACNNNNNCTCC	8 cut(s)	135, 165, 427, 457, 565, 595, 1490, 1520
Bsc4I	CCNNNNNNNGG	2 cut(s)	1678, 1957
Bse118I	RCCGGY	1 cut(s)	373
Bse1I	ACTGG	5 cut(s)	145, 166, 350, 634, 885
Bse3DI	GCAATG	3 cut(s)	241, 412, 1850
Bse8I	GATNNNNATC	1 cut(s)	1428
BseBI	CCWGG	1 cut(s)	1673
BseCI	ATCGAT	1 cut(s)	57
BseDI	CCNNGG	4 cut(s)	400, 1206, 1671, 1843
BseGI	GGATG	3 cut(s)	42, 445, 691
BseJI	GATNNNNATC	1 cut(s)	1428
BseLI	CCNNNNNNNGG	2 cut(s)	1678, 1957
BseMI	GCAATG	3 cut(s)	241, 412, 1850
BseMII	CTCAG	8 cut(s)	40, 373, 948, 981, 1038, 1420, 1652, 1704
BseNI	ACTGG	5 cut(s)	145, 166, 350, 634, 885
BseRI	GAGGAG	4 cut(s)	7, 448, 605, 1678
BseSI	GKGCMC	1 cut(s)	367
BseXI	GCAGC	7 cut(s)	258, 367, 389, 473, 963, 1067, 1070
BsgI	GTGCAG	3 cut(s)	480, 554, 1343
BshFI	GGCC	4 cut(s)	1076, 1804, 1833, 1883
BshVI	ATCGAT	1 cut(s)	57
BsiHKAI	GWGCWC	3 cut(s)	367, 1623, 1842
BsiSI	CCGG	5 cut(s)	131, 374, 1834, 1884, 2052
BslFI	GGGAC	2 cut(s)	1912, 1963
BslI	CCNNNNNNNGG	2 cut(s)	1678, 1957
BsmAI	GTCTC	4 cut(s)	32, 1024, 1277, 1732
BsmFI	GGGAC	2 cut(s)	1912, 1963
BsnI	GGCC	4 cut(s)	1076, 1804, 1833, 1883
Bso31I	GGTCTC	1 cut(s)	32
Bsp119I	TTCGAA	1 cut(s)	473
Bsp1286I	GDGCHC	4 cut(s)	367, 885, 1623, 1842
Bsp143I	GATC	9 cut(s)	12, 54, 58, 220, 844, 1416, 1434, 1597, 2001
Bsp19I	CCATGG	1 cut(s)	1206
BspACI	CCGC	8 cut(s)	33, 68, 71, 504, 741, 1214, 1460, 2015
BspANI	GGCC	4 cut(s)	1076, 1804, 1833, 1883
BspCNI	CTCAG	8 cut(s)	39, 372, 949, 980, 1039, 1419, 1651, 1703
BspDI	ATCGAT	1 cut(s)	57
BspLI	GGNNCC	3 cut(s)	1464, 1599, 1928
BspMI	ACCTGC	1 cut(s)	533
BspPI	GGATC	4 cut(s)	20, 215, 1592, 1605
BspQI	GCTCTTC	1 cut(s)	494
BspT104I	TTCGAA	1 cut(s)	473
BspTNI	GGTCTC	1 cut(s)	32
BsrBI	CCGCTC	1 cut(s)	504
BsrDI	GCAATG	3 cut(s)	241, 412, 1850
BsrFI	RCCGGY	1 cut(s)	373
BsrI	ACTGG	5 cut(s)	145, 166, 350, 634, 885
BssAI	RCCGGY	1 cut(s)	373
BssECI	CCNNGG	4 cut(s)	400, 1206, 1671, 1843
BssMI	GATC	9 cut(s)	12, 54, 58, 220, 844, 1416, 1434, 1597, 2001
BssT1I	CCWWGG	2 cut(s)	1206, 1843
Bst2UI	CCWGG	1 cut(s)	1673
Bst4CI	ACNGT	3 cut(s)	865, 1099, 1321
Bst6I	CTCTTC	3 cut(s)	494, 635, 1710
BstAPI	GCANNNNNTGC	2 cut(s)	467, 1508
BstBI	TTCGAA	1 cut(s)	473
BstC8I	GCNNGC	4 cut(s)	66, 375, 417, 1802
BstDEI	CTNAG	8 cut(s)	26, 359, 957, 967, 1047, 1406, 1638, 1690
BstDSI	CCRYGG	2 cut(s)	400, 1206
BstF5I	GGATG	3 cut(s)	42, 445, 691
BstH2I	RGCGCY	1 cut(s)	129
BstHHI	GCGC	1 cut(s)	128
BstKTI	GATC	9 cut(s)	15, 57, 61, 223, 847, 1419, 1437, 1600, 2004
BstMAI	GTCTC	4 cut(s)	32, 1024, 1277, 1732
BstMBI	GATC	9 cut(s)	12, 54, 58, 220, 844, 1416, 1434, 1597, 2001
BstMWI	GCNNNNNNNGC	9 cut(s)	225, 467, 518, 1052, 1064, 1073, 1172, 1301, 1508
BstNI	CCWGG	1 cut(s)	1673
BstSCI	CCNGG	2 cut(s)	1671, 1833
BstSLI	GKGCMC	1 cut(s)	367
BstV1I	GCAGC	7 cut(s)	258, 367, 389, 473, 963, 1067, 1070
BstV2I	GAAGAC	3 cut(s)	921, 1636, 1821
BstX2I	RGATCY	3 cut(s)	12, 1416, 1597
BstXI	CCANNNNNNTGG	1 cut(s)	1879
BstYI	RGATCY	3 cut(s)	12, 1416, 1597
Bsu15I	ATCGAT	1 cut(s)	57
BsuRI	GGCC	4 cut(s)	1076, 1804, 1833, 1883
BsuTUI	ATCGAT	1 cut(s)	57
BtgI	CCRYGG	2 cut(s)	400, 1206
BtsCI	GGATG	3 cut(s)	42, 445, 691
BtsI	GCAGTG	4 cut(s)	154, 463, 1331, 1896
BtsIMutI	CAGTG	8 cut(s)	154, 367, 463, 627, 892, 1317, 1331, 1896
BveI	ACCTGC	1 cut(s)	533
Cac8I	GCNNGC	4 cut(s)	66, 375, 417, 1802
CaiI	CAGNNNCTG	3 cut(s)	467, 944, 974
CfoI	GCGC	1 cut(s)	128
Cfr10I	RCCGGY	1 cut(s)	373
Cfr13I	GGNCC	2 cut(s)	163, 1926
ClaI	ATCGAT	1 cut(s)	57
Csp6I	GTAC	3 cut(s)	861, 1245, 1936
CviAII	CATG	5 cut(s)	878, 1207, 1352, 1397, 1879
CviQI	GTAC	3 cut(s)	861, 1245, 1936
DdeI	CTNAG	8 cut(s)	26, 359, 957, 967, 1047, 1406, 1638, 1690
DpnI	GATC	9 cut(s)	14, 56, 60, 222, 846, 1418, 1436, 1599, 2003
DpnII	GATC	9 cut(s)	12, 54, 58, 220, 844, 1416, 1434, 1597, 2001
DraI	TTTAAA	1 cut(s)	1449
EaeI	YGGCCR	1 cut(s)	1881
Eam1104I	CTCTTC	3 cut(s)	494, 635, 1710
EarI	CTCTTC	3 cut(s)	494, 635, 1710
EciI	GGCGGA	2 cut(s)	86, 756
Ecl136II	GAGCTC	1 cut(s)	1621
Eco130I	CCWWGG	2 cut(s)	1206, 1843
Eco24I	GRGCYC	2 cut(s)	885, 1623
Eco31I	GGTCTC	1 cut(s)	32
Eco47I	GGWCC	2 cut(s)	163, 1926
Eco53kI	GAGCTC	1 cut(s)	1621
Eco57I	CTGAAG	4 cut(s)	179, 921, 933, 1841
EcoICRI	GAGCTC	1 cut(s)	1621
EcoRII	CCWGG	1 cut(s)	1671
EcoT14I	CCWWGG	2 cut(s)	1206, 1843
EcoT38I	GRGCYC	2 cut(s)	885, 1623
ErhI	CCWWGG	2 cut(s)	1206, 1843
FaeI	CATG	5 cut(s)	881, 1210, 1355, 1400, 1882
FalI	AAGNNNNNCTT	2 cut(s)	1112, 1144
FaqI	GGGAC	2 cut(s)	1912, 1963
FatI	CATG	5 cut(s)	877, 1206, 1351, 1396, 1878
FauI	CCCGC	1 cut(s)	497
FokI	GGATG	3 cut(s)	29, 452, 698
FriOI	GRGCYC	2 cut(s)	885, 1623
FspBI	CTAG	9 cut(s)	185, 782, 897, 1043, 1248, 1313, 1739, 1844, 1931
GlaI	GCGC	1 cut(s)	127
GsuI	CTGGAG	2 cut(s)	162, 1607
HaeII	RGCGCY	1 cut(s)	129
HaeIII	GGCC	4 cut(s)	1076, 1804, 1833, 1883
HapII	CCGG	5 cut(s)	131, 374, 1834, 1884, 2052
HhaI	GCGC	1 cut(s)	128
Hin1II	CATG	5 cut(s)	881, 1210, 1355, 1400, 1882
Hin6I	GCGC	1 cut(s)	126
HinP1I	GCGC	1 cut(s)	126
HpaII	CCGG	5 cut(s)	131, 374, 1834, 1884, 2052
HphI	GGTGA	3 cut(s)	644, 680, 2029
Hpy166II	GTNNAC	3 cut(s)	365, 697, 1936
Hpy188III	TCNNGA	4 cut(s)	605, 782, 1334, 1408
Hpy8I	GTNNAC	3 cut(s)	365, 697, 1936
Hpy99I	CGWCG	2 cut(s)	110, 113
HpyAV	CCTTC	9 cut(s)	154, 548, 656, 751, 797, 1003, 1081, 1106, 1739
HpyCH4III	ACNGT	3 cut(s)	865, 1099, 1321
HpyCH4IV	ACGT	1 cut(s)	1775
HpyCH4V	TGCA	7 cut(s)	365, 461, 535, 1289, 1324, 1540, 1916
HpyF10VI	GCNNNNNNNGC	9 cut(s)	225, 467, 518, 1052, 1064, 1073, 1172, 1301, 1508
HpyF3I	CTNAG	8 cut(s)	26, 359, 957, 967, 1047, 1406, 1638, 1690
HpySE526I	ACGT	1 cut(s)	1775
Hsp92II	CATG	5 cut(s)	881, 1210, 1355, 1400, 1882
HspAI	GCGC	1 cut(s)	126
KroI	GCCGGC	1 cut(s)	373
KroNI	GCCGGC	1 cut(s)	375
Kzo9I	GATC	9 cut(s)	12, 54, 58, 220, 844, 1416, 1434, 1597, 2001
LguI	GCTCTTC	1 cut(s)	494
LmnI	GCTCC	8 cut(s)	133, 216, 743, 760, 1468, 1626, 1837, 1886
Lsp1109I	GCAGC	7 cut(s)	258, 367, 389, 473, 963, 1067, 1070
LweI	GCATC	1 cut(s)	1414
MaeI	CTAG	9 cut(s)	185, 782, 897, 1043, 1248, 1313, 1739, 1844, 1931
MaeII	ACGT	1 cut(s)	1775
MaeIII	GTNAC	5 cut(s)	78, 341, 940, 1516, 1528
MalI	GATC	9 cut(s)	14, 56, 60, 222, 846, 1418, 1436, 1599, 2003
MbiI	CCGCTC	1 cut(s)	504
MboI	GATC	9 cut(s)	12, 54, 58, 220, 844, 1416, 1434, 1597, 2001
MfeI	CAATTG	1 cut(s)	1862
MflI	RGATCY	3 cut(s)	12, 1416, 1597
MhlI	GDGCHC	4 cut(s)	367, 885, 1623, 1842
MlyI	GAGTC	7 cut(s)	83, 343, 602, 794, 959, 968, 1862
MmeI	TCCRAC	5 cut(s)	73, 289, 654, 1625, 2007
MroNI	GCCGGC	1 cut(s)	373
MroXI	GAANNNNTTC	2 cut(s)	1633, 1825
MslI	CAYNNNNRTG	2 cut(s)	1574, 1877
MspA1I	CMGCKG	1 cut(s)	380
MspI	CCGG	5 cut(s)	131, 374, 1834, 1884, 2052
MspR9I	CCNGG	2 cut(s)	1673, 1835
MunI	CAATTG	1 cut(s)	1862
MvaI	CCWGG	1 cut(s)	1673
MwoI	GCNNNNNNNGC	9 cut(s)	225, 467, 518, 1052, 1064, 1073, 1172, 1301, 1508
NaeI	GCCGGC	1 cut(s)	375
NciI	CCSGG	1 cut(s)	1835
NcoI	CCATGG	1 cut(s)	1206
NdeII	GATC	9 cut(s)	12, 54, 58, 220, 844, 1416, 1434, 1597, 2001
NgoMIV	GCCGGC	1 cut(s)	373
NlaIII	CATG	5 cut(s)	881, 1210, 1355, 1400, 1882
NlaIV	GGNNCC	3 cut(s)	1464, 1599, 1928
NmeAIII	GCCGAG	1 cut(s)	61
NmuCI	GTSAC	1 cut(s)	341
NspV	TTCGAA	1 cut(s)	473
PaqCI	CACCTGC	1 cut(s)	533
PciSI	GCTCTTC	1 cut(s)	494
PcsI	WCGNNNNNNNCGW	1 cut(s)	108
PdiI	GCCGGC	1 cut(s)	375
PdmI	GAANNNNTTC	2 cut(s)	1633, 1825
PfeI	GAWTC	9 cut(s)	493, 608, 971, 989, 1039, 1330, 1657, 1793, 1821
PleI	GAGTC	7 cut(s)	82, 343, 601, 793, 959, 967, 1862
PpsI	GAGTC	7 cut(s)	82, 343, 601, 793, 959, 967, 1862
PshBI	ATTAAT	1 cut(s)	2037
Psp124BI	GAGCTC	1 cut(s)	1623
Psp6I	CCWGG	1 cut(s)	1671
PspGI	CCWGG	1 cut(s)	1671
PspN4I	GGNNCC	3 cut(s)	1464, 1599, 1928
PspPI	GGNCC	2 cut(s)	163, 1926
PstNI	CAGNNNCTG	3 cut(s)	467, 944, 974
PsuI	RGATCY	3 cut(s)	12, 1416, 1597
PvuII	CAGCTG	1 cut(s)	380
RsaI	GTAC	3 cut(s)	862, 1246, 1937
RsaNI	GTAC	3 cut(s)	861, 1245, 1936
RseI	CAYNNNNRTG	2 cut(s)	1574, 1877
SacI	GAGCTC	1 cut(s)	1623
SapI	GCTCTTC	1 cut(s)	494
Sau3AI	GATC	9 cut(s)	12, 54, 58, 220, 844, 1416, 1434, 1597, 2001
Sau96I	GGNCC	2 cut(s)	163, 1926
ScaI	AGTACT	2 cut(s)	862, 1246
SchI	GAGTC	7 cut(s)	83, 343, 602, 794, 959, 968, 1862
ScrFI	CCNGG	2 cut(s)	1673, 1835
SduI	GDGCHC	4 cut(s)	367, 885, 1623, 1842
SfaNI	GCATC	1 cut(s)	1414
SfuI	TTCGAA	1 cut(s)	473
SinI	GGWCC	2 cut(s)	163, 1926
SmiMI	CAYNNNNRTG	2 cut(s)	1574, 1877
SmlI	CTYRAG	3 cut(s)	1280, 1481, 1729
SmoI	CTYRAG	3 cut(s)	1280, 1481, 1729
SsiI	CCGC	8 cut(s)	33, 68, 71, 504, 741, 1214, 1460, 2015
SspMI	CTAG	9 cut(s)	185, 782, 897, 1043, 1248, 1313, 1739, 1844, 1931
SstI	GAGCTC	1 cut(s)	1623
StyD4I	CCNGG	2 cut(s)	1671, 1833
StyI	CCWWGG	2 cut(s)	1206, 1843
TaaI	ACNGT	3 cut(s)	865, 1099, 1321
TaiI	ACGT	1 cut(s)	1778
TaqI	TCGA	6 cut(s)	57, 395, 473, 1335, 1366, 1437
TaqII	GACCGA	1 cut(s)	1775
TatI	WGTACW	3 cut(s)	860, 1244, 1935
TauI	GCSGC	4 cut(s)	35, 71, 1217, 1463
TfiI	GAWTC	9 cut(s)	493, 608, 971, 989, 1039, 1330, 1657, 1793, 1821
TscAI	CASTG	8 cut(s)	154, 367, 463, 634, 892, 1324, 1331, 1896
TseFI	GTSAC	1 cut(s)	341
TseI	GCWGC	7 cut(s)	246, 377, 380, 461, 951, 1055, 1058
Tsp45I	GTSAC	1 cut(s)	341
TspGWI	ACGGA	5 cut(s)	97, 631, 1619, 1799, 1814
TspRI	CASTG	8 cut(s)	154, 367, 463, 634, 892, 1324, 1331, 1896
VneI	GTGCAC	1 cut(s)	363
VpaK11BI	GGWCC	2 cut(s)	163, 1926
VspI	ATTAAT	1 cut(s)	2037
XapI	RAATTY	2 cut(s)	475, 1763
XbaI	TCTAGA	1 cut(s)	781
XmaJI	CCTAGG	1 cut(s)	1843
XmnI	GAANNNNTTC	2 cut(s)	1633, 1825
XspI	CTAG	9 cut(s)	185, 782, 897, 1043, 1248, 1313, 1739, 1844, 1931
ZrmI	AGTACT	2 cut(s)	862, 1246

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.