Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0007396

Physical Location & Seq

Genomic Coordinates Reverse (-)

1030452 .. 1035094

Gene Structure 4643 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG016200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2070 bp

ATGGCGAATTGGATCTCCTCCAAACTCAGAGCCGCCGAGACCATCCTCCAACAGATCGATCAGCAAGCGGCGGAGTCGTTACGGAAAAACGAGAAGCCTGTCGCCGACGACGACTTGAAGTTGGGCGCTCCGGCGAAAACCGGAGGCAGTGTGCCTCTGAAGGACCAGTTGAAGAAGAAAACCCTAGAAAATAGTGATTATAGCCGAAAATTAAGGAGCGATCCGAGCTTTAGCAATGTTAATAGCAGCAATTATAGTAGTAGTGGTAATGAAAATAGTAGTAGTAATAATAAGGATAAAGAGATTGTTGGAAAGGCGAAATCCGAGCCTCTTAGTGATAGTGACTGGACTCAACTTCTCAGTGCACCGAAGCTGGCAGCTGCTACTTCTACATCGAGCCGTGGCAATGGTTTGCCCGCGGTTCGGGGTTTGAGGAGGGATGGTAGGAGGCAGGGCAGTGCAGCTTCTGCTTCGAATTTGGAGGTTAAGAAGAATCAGAAGAGTGGGAGTGCTAATAATGTTATGAAGTCGGTGCAGAGAGCAGGTGTTGGGGAAGGTAGGAAGTTGAATGGGAGAGTGAGTGATGGGGAGGAGTCTGGTATTCCGGATTCAGCACGGAGGTTTTCCACTGGTGAATTGAAGAGTGATGGTAGGGTTATGGAAGGAGGTGAGTTGGATTATAGGGATGTGGGAGTGGACACTTCGGTTGAAATAAAAGGTAAGGCAAATGAAGAAAAGGGCGGAGCTTTTAATGCCTTTGATACGAAGGAGCTTTCATTGGAGGGTCGTCTAGAGTCAGTAAAGAAAAATGAAGGGTTGTCTGACAAGAAGATTGGAGGGCAGAGTATGAACGATCAGTTGAGAAGCACTACTGTCAGGGGTAAGCATGAGTCCAGTGAAGCTGCTAGGAGTTCTACCTCCGAAGACTTCAAGAGAGGTTTTACTTCAGTAACTGATGGCAGCTCTGAGTCTGACTCAGATTCTGGTTCAAGTTCTGATTCTGAAAGTGAGCGTGAGAAGGAGGAAAGGAGAAAGCAGAGACAGAAGATTCTAGCTGAGAAAGCAGCAGCTAAAGCTGTGGAGGCCATTAAAGAGAAGGAAAATACGGTTGCCAGATTGGAAGGGGAGAAGCAGAGCTTGGAGAAAATACTTGAAGTTCAAGTGAAGCAACAAGCACAAGAGGCTTCAAAGCTACAAACGACGATGATGGAAACCATGGAAGCGGCTGATATAGAGAAGCAGAAACATAATAGTACTAGAATGGAAGCCTTTGTGCGTTTGGCTAAACTTGAGACTGCAAATGCTGACCTTGCGAAATCCCTAGCCACTGTGCAGTGGAATCTCGAACAGGAGGTCAATCATGTAGCAGAACTTCGACAGCAAGTTGAGTTAAAAGAAGTTAGCCATGAAGAACTCAGGAGGAAGATCTCTGATACTCATCAGATCGAAATATCTTTAAAGAAAGTAGCGGCTCCAAAAGGACTTGAACTTGAGCGAGAGATTTTGGAGGCAGAGTATGCTATTATAACTGATAAAGTTACACGACTGCAAGATAAGGCAAAGAAGCTGGAAGCAGACATTGAAATGACAAGGAAAGATATAGAGGATCCAACAGATATAGAAATTGAGCTCCAGCGAAGACTTTCTCAGATGACTGACCATTTGATTCAGAAACAGGCCCAGGTTGAGGCTCTCTCCTCAGAAAAGGCAACTCTTCAATTCAGAATTGAGGCAGTCTCAAGGTTGCTAGATGAAGGCAAATCAATGACCGAATTTTCTGCTACGTCATCAAGGGACATTGAATCAGGCAGGCCACTATTTGAAGACAGAATCCGTTCGGGCCGGGAGCACCTAGGTTCATTGCTTCAGCAATTGGATTCCATTTTCATGGCCGGAGCAGTGTTTTTAAGGAGGAACACGACTGCAAGATTATGGTCCCTAGTGTACTTTATTTGCCTCCATTTCTGGGTTATTTATATTCTTATGTCCCATTCTCAACCATCAAGTGAGATCAAATCTGGGGCAGTGATATCCTTGGAAAACATTAATAACAACACTTCAGGTGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0000301 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005795 GO:0006810 GO:0006891 GO:0006996 GO:0007030 GO:0008150 GO:0009987 GO:0010256 GO:0012505 GO:0016020 GO:0016043 GO:0016192 GO:0031090 GO:0031984 GO:0031985 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048193 GO:0051179 GO:0051234 GO:0071840 GO:0098588 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Golgin_A5

Protein Analysis

689

Amino Acids

76.18

Weight (kDa)

6.29

Isoelectric Point (pI)

49.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Golgin_A5	PF09787	449 - 664	5.2e-17	Golgin subfamily A member 5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007396)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18190
fragaria_vesca	FvH4_5g17221 FvH4_5g17221 FvH4_5g17221 FvH4_5g17221 FvH4_5g17221
malus_domestica	MD06G1230800.v1.1 MD14G1235400.v1.1
prunus_persica	Prupe.5G232100_v2.0.a1 Prupe.7G033500_v2.0.a1
pyrus_communis	pycom06g20200
rosa_chinensis	RchiOBHm_Chr7g0178571
rosa_laevigata	RLG00000005436 RLG00000013860
rosa_multiflora	Rmu_co8125946.1_g000001 Rmu_sc0012505.1_g000003 Rmu_sc0021447.1_g000002
rosa_roxburghii	Rroxscaffold_3G00274800
rosa_rugosa	Rorug06G0418000
rosa_samantha	Rh5AG530000 Rh7AG016700 Rh7BG016200 Rh7CG016900 Rh7DG016800
rosa_wichuraiana	Rw7G001330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1526
AarI	CACCTGC	1 cut(s)	533
Acc36I	ACCTGC	1 cut(s)	533
AccII	CGCG	1 cut(s)	419
AccIII	TCCGGA	1 cut(s)	604
AciI	CCGC	8 cut(s)	33, 68, 71, 417, 419, 741, 1223, 1469
AclWI	GGATC	4 cut(s)	20, 215, 1601, 1614
AcoI	YGGCCR	1 cut(s)	1890
AcsI	RAATTY	2 cut(s)	475, 1772
AcuI	CTGAAG	4 cut(s)	179, 930, 1850, 2043
AfaI	GTAC	2 cut(s)	1255, 1946
AfiI	CCNNNNNNNGG	3 cut(s)	423, 1687, 1966
AjnI	CCWGG	1 cut(s)	1680
AjuI	GAANNNNNNNTTGG	2 cut(s)	1121, 1153
Alw21I	GWGCWC	3 cut(s)	367, 1632, 1851
Alw26I	GTCTC	4 cut(s)	32, 1033, 1286, 1741
Alw44I	GTGCAC	1 cut(s)	363
AlwI	GGATC	4 cut(s)	20, 215, 1601, 1614
AlwNI	CAGNNNCTG	3 cut(s)	467, 953, 983
Aor13HI	TCCGGA	1 cut(s)	604
AoxI	GGCC	5 cut(s)	1083, 1677, 1811, 1840, 1890
ApaLI	GTGCAC	1 cut(s)	363
ApeKI	GCWGC	8 cut(s)	246, 377, 380, 461, 902, 960, 1064, 1067
ApoI	RAATTY	2 cut(s)	475, 1772
ArsI	GACNNNNNNTTYG	4 cut(s)	1338, 1370, 1645, 1677
AseI	ATTAAT	1 cut(s)	2046
Asp700I	GAANNNNTTC	2 cut(s)	1642, 1834
AspA2I	CCTAGG	1 cut(s)	1852
AspLEI	GCGC	1 cut(s)	128
AspS9I	GGNCC	4 cut(s)	163, 1678, 1840, 1935
AsuC2I	CCSGG	1 cut(s)	1844
AsuHPI	GGTGA	2 cut(s)	644, 680
AsuII	TTCGAA	1 cut(s)	473
AvaII	GGWCC	2 cut(s)	163, 1935
AvrII	CCTAGG	1 cut(s)	1852
BaeGI	GKGCMC	1 cut(s)	367
BamHI	GGATCC	1 cut(s)	1606
BanII	GRGCYC	1 cut(s)	1632
BarI	GAAGNNNNNNTAC	2 cut(s)	1356, 1388
BbsI	GAAGAC	3 cut(s)	930, 1645, 1830
Bbv12I	GWGCWC	3 cut(s)	367, 1632, 1851
BbvI	GCAGC	8 cut(s)	258, 367, 389, 473, 889, 972, 1076, 1079
BccI	CCATC	7 cut(s)	50, 434, 578, 641, 950, 1201, 2008
BceAI	ACGGC	1 cut(s)	384
BcgI	CGANNNNNNTGC	2 cut(s)	1760, 1794
BciT130I	CCWGG	1 cut(s)	1682
BcnI	CCSGG	1 cut(s)	1844
BcoDI	GTCTC	4 cut(s)	32, 1033, 1286, 1741
BfaI	CTAG	9 cut(s)	185, 791, 906, 1052, 1257, 1322, 1748, 1853, 1940
BfoI	RGCGCY	1 cut(s)	129
BfuAI	ACCTGC	1 cut(s)	533
BglII	AGATCT	1 cut(s)	1425
BlnI	CCTAGG	1 cut(s)	1852
BmcAI	AGTACT	1 cut(s)	1255
Bme1390I	CCNGG	2 cut(s)	1682, 1844
Bme18I	GGWCC	2 cut(s)	163, 1935
BmgT120I	GGNCC	4 cut(s)	163, 1678, 1840, 1935
BmiI	GGNNCC	3 cut(s)	1473, 1608, 1937
BmrFI	CCNGG	2 cut(s)	1682, 1844
BpiI	GAAGAC	3 cut(s)	930, 1645, 1830
BplI	GAGNNNNNCTC	6 cut(s)	959, 991, 1679, 1711, 1721, 1753
BpmI	CTGGAG	1 cut(s)	1616
Bpu14I	TTCGAA	1 cut(s)	473
BpuEI	CTTGAG	3 cut(s)	1310, 1511, 1723
BpuMI	CCSGG	1 cut(s)	1844
Bsa29I	ATCGAT	1 cut(s)	57
BsaBI	GATNNNNATC	1 cut(s)	1437
BsaI	GGTCTC	1 cut(s)	32
BsaJI	CCNNGG	6 cut(s)	400, 417, 1215, 1680, 1852, 2034
BsaWI	WCCGGW	2 cut(s)	140, 604
BsaXI	ACNNNNNCTCC	8 cut(s)	135, 165, 427, 457, 565, 595, 1499, 1529
Bsc4I	CCNNNNNNNGG	3 cut(s)	423, 1687, 1966
Bse1I	ACTGG	4 cut(s)	166, 350, 634, 894
Bse3DI	GCAATG	3 cut(s)	241, 412, 1859
Bse8I	GATNNNNATC	1 cut(s)	1437
BseAI	TCCGGA	1 cut(s)	604
BseBI	CCWGG	1 cut(s)	1682
BseCI	ATCGAT	1 cut(s)	57
BseDI	CCNNGG	6 cut(s)	400, 417, 1215, 1680, 1852, 2034
BseGI	GGATG	3 cut(s)	42, 445, 691
BseJI	GATNNNNATC	1 cut(s)	1437
BseLI	CCNNNNNNNGG	3 cut(s)	423, 1687, 1966
BseMI	GCAATG	3 cut(s)	241, 412, 1859
BseMII	CTCAG	8 cut(s)	40, 373, 957, 990, 1047, 1429, 1661, 1713
BseNI	ACTGG	4 cut(s)	166, 350, 634, 894
BseRI	GAGGAG	4 cut(s)	7, 448, 605, 1687
BseSI	GKGCMC	1 cut(s)	367
BseXI	GCAGC	8 cut(s)	258, 367, 389, 473, 889, 972, 1076, 1079
BsgI	GTGCAG	3 cut(s)	480, 554, 1352
Bsh1236I	CGCG	1 cut(s)	419
BshFI	GGCC	5 cut(s)	1085, 1679, 1813, 1842, 1892
BshVI	ATCGAT	1 cut(s)	57
BsiHKAI	GWGCWC	3 cut(s)	367, 1632, 1851
BsiSI	CCGG	5 cut(s)	131, 141, 605, 1843, 1893
BslFI	GGGAC	3 cut(s)	1808, 1921, 1972
BslI	CCNNNNNNNGG	3 cut(s)	423, 1687, 1966
BsmAI	GTCTC	4 cut(s)	32, 1033, 1286, 1741
BsmFI	GGGAC	3 cut(s)	1808, 1921, 1972
BsnI	GGCC	5 cut(s)	1085, 1679, 1813, 1842, 1892
Bso31I	GGTCTC	1 cut(s)	32
Bsp119I	TTCGAA	1 cut(s)	473
Bsp1286I	GDGCHC	3 cut(s)	367, 1632, 1851
Bsp13I	TCCGGA	1 cut(s)	604
Bsp143I	GATC	9 cut(s)	12, 54, 58, 220, 853, 1425, 1443, 1606, 2010
Bsp19I	CCATGG	1 cut(s)	1215
BspACI	CCGC	8 cut(s)	33, 68, 71, 417, 419, 741, 1223, 1469
BspANI	GGCC	5 cut(s)	1085, 1679, 1813, 1842, 1892
BspCNI	CTCAG	8 cut(s)	39, 372, 958, 989, 1048, 1428, 1660, 1712
BspDI	ATCGAT	1 cut(s)	57
BspEI	TCCGGA	1 cut(s)	604
BspFNI	CGCG	1 cut(s)	419
BspLI	GGNNCC	3 cut(s)	1473, 1608, 1937
BspMI	ACCTGC	1 cut(s)	533
BspPI	GGATC	4 cut(s)	20, 215, 1601, 1614
BspT104I	TTCGAA	1 cut(s)	473
BspTNI	GGTCTC	1 cut(s)	32
BsrDI	GCAATG	3 cut(s)	241, 412, 1859
BsrI	ACTGG	4 cut(s)	166, 350, 634, 894
BssECI	CCNNGG	6 cut(s)	400, 417, 1215, 1680, 1852, 2034
BssMI	GATC	9 cut(s)	12, 54, 58, 220, 853, 1425, 1443, 1606, 2010
BssT1I	CCWWGG	3 cut(s)	1215, 1852, 2034
Bst2UI	CCWGG	1 cut(s)	1682
Bst4CI	ACNGT	3 cut(s)	874, 1108, 1330
Bst6I	CTCTTC	3 cut(s)	494, 635, 1719
BstAPI	GCANNNNNTGC	2 cut(s)	467, 1517
BstBI	TTCGAA	1 cut(s)	473
BstC8I	GCNNGC	4 cut(s)	66, 375, 417, 1811
BstDEI	CTNAG	9 cut(s)	26, 332, 359, 966, 976, 1056, 1415, 1647, 1699
BstDSI	CCRYGG	3 cut(s)	400, 417, 1215
BstF5I	GGATG	3 cut(s)	42, 445, 691
BstFNI	CGCG	1 cut(s)	419
BstH2I	RGCGCY	1 cut(s)	129
BstHHI	GCGC	1 cut(s)	128
BstKTI	GATC	9 cut(s)	15, 57, 61, 223, 856, 1428, 1446, 1609, 2013
BstMAI	GTCTC	4 cut(s)	32, 1033, 1286, 1741
BstMBI	GATC	9 cut(s)	12, 54, 58, 220, 853, 1425, 1443, 1606, 2010
BstMWI	GCNNNNNNNGC	9 cut(s)	225, 467, 752, 1061, 1073, 1082, 1181, 1310, 1517
BstNI	CCWGG	1 cut(s)	1682
BstSCI	CCNGG	2 cut(s)	1680, 1842
BstSLI	GKGCMC	1 cut(s)	367
BstUI	CGCG	1 cut(s)	419
BstV1I	GCAGC	8 cut(s)	258, 367, 389, 473, 889, 972, 1076, 1079
BstV2I	GAAGAC	3 cut(s)	930, 1645, 1830
BstX2I	RGATCY	3 cut(s)	12, 1425, 1606
BstXI	CCANNNNNNTGG	1 cut(s)	1888
BstYI	RGATCY	3 cut(s)	12, 1425, 1606
Bsu15I	ATCGAT	1 cut(s)	57
BsuRI	GGCC	5 cut(s)	1085, 1679, 1813, 1842, 1892
BsuTUI	ATCGAT	1 cut(s)	57
BtgI	CCRYGG	3 cut(s)	400, 417, 1215
BtsCI	GGATG	3 cut(s)	42, 445, 691
BtsI	GCAGTG	5 cut(s)	154, 463, 1340, 1905, 2031
BtsIMutI	CAGTG	9 cut(s)	154, 367, 463, 627, 901, 1326, 1340, 1905, 2031
BveI	ACCTGC	1 cut(s)	533
Cac8I	GCNNGC	4 cut(s)	66, 375, 417, 1811
CaiI	CAGNNNCTG	3 cut(s)	467, 953, 983
CfoI	GCGC	1 cut(s)	128
Cfr13I	GGNCC	4 cut(s)	163, 1678, 1840, 1935
Cfr42I	CCGCGG	1 cut(s)	420
ClaI	ATCGAT	1 cut(s)	57
Csp6I	GTAC	2 cut(s)	1254, 1945
CviAII	CATG	5 cut(s)	887, 1216, 1361, 1406, 1888
CviQI	GTAC	2 cut(s)	1254, 1945
DdeI	CTNAG	9 cut(s)	26, 332, 359, 966, 976, 1056, 1415, 1647, 1699
DpnI	GATC	9 cut(s)	14, 56, 60, 222, 855, 1427, 1445, 1608, 2012
DpnII	GATC	9 cut(s)	12, 54, 58, 220, 853, 1425, 1443, 1606, 2010
DraI	TTTAAA	1 cut(s)	1458
EaeI	YGGCCR	1 cut(s)	1890
Eam1104I	CTCTTC	3 cut(s)	494, 635, 1719
EarI	CTCTTC	3 cut(s)	494, 635, 1719
EciI	GGCGGA	2 cut(s)	86, 756
Ecl136II	GAGCTC	1 cut(s)	1630
Eco130I	CCWWGG	3 cut(s)	1215, 1852, 2034
Eco24I	GRGCYC	1 cut(s)	1632
Eco31I	GGTCTC	1 cut(s)	32
Eco32I	GATATC	1 cut(s)	2031
Eco47I	GGWCC	2 cut(s)	163, 1935
Eco53kI	GAGCTC	1 cut(s)	1630
Eco57I	CTGAAG	4 cut(s)	179, 930, 1850, 2043
EcoICRI	GAGCTC	1 cut(s)	1630
EcoRII	CCWGG	1 cut(s)	1680
EcoRV	GATATC	1 cut(s)	2031
EcoT14I	CCWWGG	3 cut(s)	1215, 1852, 2034
EcoT38I	GRGCYC	1 cut(s)	1632
ErhI	CCWWGG	3 cut(s)	1215, 1852, 2034
FaeI	CATG	5 cut(s)	890, 1219, 1364, 1409, 1891
FalI	AAGNNNNNCTT	2 cut(s)	1121, 1153
FaqI	GGGAC	3 cut(s)	1808, 1921, 1972
FatI	CATG	5 cut(s)	886, 1215, 1360, 1405, 1887
FauI	CCCGC	1 cut(s)	424
FokI	GGATG	3 cut(s)	29, 452, 698
FriOI	GRGCYC	1 cut(s)	1632
FspBI	CTAG	9 cut(s)	185, 791, 906, 1052, 1257, 1322, 1748, 1853, 1940
GlaI	GCGC	1 cut(s)	127
GsuI	CTGGAG	1 cut(s)	1616
HaeII	RGCGCY	1 cut(s)	129
HaeIII	GGCC	5 cut(s)	1085, 1679, 1813, 1842, 1892
HapII	CCGG	5 cut(s)	131, 141, 605, 1843, 1893
HhaI	GCGC	1 cut(s)	128
Hin1II	CATG	5 cut(s)	890, 1219, 1364, 1409, 1891
Hin6I	GCGC	1 cut(s)	126
HinP1I	GCGC	1 cut(s)	126
HpaII	CCGG	5 cut(s)	131, 141, 605, 1843, 1893
HphI	GGTGA	2 cut(s)	644, 680
Hpy166II	GTNNAC	3 cut(s)	365, 697, 1945
Hpy188III	TCNNGA	5 cut(s)	605, 791, 931, 1343, 1417
Hpy8I	GTNNAC	3 cut(s)	365, 697, 1945
Hpy99I	CGWCG	3 cut(s)	110, 113, 1204
HpyAV	CCTTC	9 cut(s)	154, 548, 656, 760, 806, 1012, 1090, 1115, 1748
HpyCH4III	ACNGT	3 cut(s)	874, 1108, 1330
HpyCH4IV	ACGT	1 cut(s)	1784
HpyCH4V	TGCA	7 cut(s)	365, 461, 535, 1298, 1333, 1549, 1925
HpyF10VI	GCNNNNNNNGC	9 cut(s)	225, 467, 752, 1061, 1073, 1082, 1181, 1310, 1517
HpyF3I	CTNAG	9 cut(s)	26, 332, 359, 966, 976, 1056, 1415, 1647, 1699
HpySE526I	ACGT	1 cut(s)	1784
Hsp92II	CATG	5 cut(s)	890, 1219, 1364, 1409, 1891
HspAI	GCGC	1 cut(s)	126
Kpn2I	TCCGGA	1 cut(s)	604
KspI	CCGCGG	1 cut(s)	420
Kzo9I	GATC	9 cut(s)	12, 54, 58, 220, 853, 1425, 1443, 1606, 2010
LmnI	GCTCC	8 cut(s)	133, 216, 743, 769, 1477, 1635, 1846, 1895
Lsp1109I	GCAGC	8 cut(s)	258, 367, 389, 473, 889, 972, 1076, 1079
MaeI	CTAG	9 cut(s)	185, 791, 906, 1052, 1257, 1322, 1748, 1853, 1940
MaeII	ACGT	1 cut(s)	1784
MaeIII	GTNAC	4 cut(s)	78, 341, 949, 1537
MalI	GATC	9 cut(s)	14, 56, 60, 222, 855, 1427, 1445, 1608, 2012
MboI	GATC	9 cut(s)	12, 54, 58, 220, 853, 1425, 1443, 1606, 2010
MfeI	CAATTG	1 cut(s)	1871
MflI	RGATCY	3 cut(s)	12, 1425, 1606
MhlI	GDGCHC	3 cut(s)	367, 1632, 1851
MlyI	GAGTC	7 cut(s)	83, 343, 602, 803, 899, 968, 977
MmeI	TCCRAC	4 cut(s)	73, 289, 654, 1634
MroI	TCCGGA	1 cut(s)	604
MroXI	GAANNNNTTC	2 cut(s)	1642, 1834
MseI	TTAA	9 cut(s)	212, 240, 486, 750, 1089, 1391, 1457, 1907, 2046
MslI	CAYNNNNRTG	2 cut(s)	1583, 1886
MspA1I	CMGCKG	2 cut(s)	380, 419
MspI	CCGG	5 cut(s)	131, 141, 605, 1843, 1893
MspR9I	CCNGG	2 cut(s)	1682, 1844
MunI	CAATTG	1 cut(s)	1871
MvaI	CCWGG	1 cut(s)	1682
MvnI	CGCG	1 cut(s)	419
MwoI	GCNNNNNNNGC	9 cut(s)	225, 467, 752, 1061, 1073, 1082, 1181, 1310, 1517
NciI	CCSGG	1 cut(s)	1844
NcoI	CCATGG	1 cut(s)	1215
NdeII	GATC	9 cut(s)	12, 54, 58, 220, 853, 1425, 1443, 1606, 2010
NlaIII	CATG	5 cut(s)	890, 1219, 1364, 1409, 1891
NlaIV	GGNNCC	3 cut(s)	1473, 1608, 1937
NmeAIII	GCCGAG	1 cut(s)	61
NmuCI	GTSAC	1 cut(s)	341
NspV	TTCGAA	1 cut(s)	473
PaqCI	CACCTGC	1 cut(s)	533
PcsI	WCGNNNNNNNCGW	1 cut(s)	108
PdmI	GAANNNNTTC	2 cut(s)	1642, 1834
PleI	GAGTC	7 cut(s)	82, 343, 601, 802, 898, 968, 976
PpsI	GAGTC	7 cut(s)	82, 343, 601, 802, 898, 968, 976
PshBI	ATTAAT	1 cut(s)	2046
PsiI	TTATAA	1 cut(s)	1526
Psp124BI	GAGCTC	1 cut(s)	1632
Psp6I	CCWGG	1 cut(s)	1680
PspGI	CCWGG	1 cut(s)	1680
PspN4I	GGNNCC	3 cut(s)	1473, 1608, 1937
PspPI	GGNCC	4 cut(s)	163, 1678, 1840, 1935
PstNI	CAGNNNCTG	3 cut(s)	467, 953, 983
PsuI	RGATCY	3 cut(s)	12, 1425, 1606
PvuII	CAGCTG	1 cut(s)	380
RsaI	GTAC	2 cut(s)	1255, 1946
RsaNI	GTAC	2 cut(s)	1254, 1945
RseI	CAYNNNNRTG	2 cut(s)	1583, 1886
SacI	GAGCTC	1 cut(s)	1632
SacII	CCGCGG	1 cut(s)	420
SaqAI	TTAA	9 cut(s)	212, 240, 486, 750, 1089, 1391, 1457, 1907, 2046
Sau3AI	GATC	9 cut(s)	12, 54, 58, 220, 853, 1425, 1443, 1606, 2010
Sau96I	GGNCC	4 cut(s)	163, 1678, 1840, 1935
ScaI	AGTACT	1 cut(s)	1255
SchI	GAGTC	7 cut(s)	83, 343, 602, 803, 899, 968, 977
ScrFI	CCNGG	2 cut(s)	1682, 1844
SduI	GDGCHC	3 cut(s)	367, 1632, 1851
Sfr303I	CCGCGG	1 cut(s)	420
SfuI	TTCGAA	1 cut(s)	473
SgrBI	CCGCGG	1 cut(s)	420
SinI	GGWCC	2 cut(s)	163, 1935
SmiMI	CAYNNNNRTG	2 cut(s)	1583, 1886
SmlI	CTYRAG	3 cut(s)	1289, 1490, 1738
SmoI	CTYRAG	3 cut(s)	1289, 1490, 1738
SsiI	CCGC	8 cut(s)	33, 68, 71, 417, 419, 741, 1223, 1469
SspMI	CTAG	9 cut(s)	185, 791, 906, 1052, 1257, 1322, 1748, 1853, 1940
SstI	GAGCTC	1 cut(s)	1632
StyD4I	CCNGG	2 cut(s)	1680, 1842
StyI	CCWWGG	3 cut(s)	1215, 1852, 2034
TaaI	ACNGT	3 cut(s)	874, 1108, 1330
TaiI	ACGT	1 cut(s)	1787
TaqI	TCGA	6 cut(s)	57, 395, 473, 1344, 1375, 1446
TaqII	GACCGA	1 cut(s)	1784
TatI	WGTACW	2 cut(s)	1253, 1944
TauI	GCSGC	4 cut(s)	35, 71, 1226, 1472
Tru1I	TTAA	9 cut(s)	212, 240, 486, 750, 1089, 1391, 1457, 1907, 2046
Tru9I	TTAA	9 cut(s)	212, 240, 486, 750, 1089, 1391, 1457, 1907, 2046
TscAI	CASTG	9 cut(s)	154, 367, 463, 634, 901, 1333, 1340, 1905, 2031
TseFI	GTSAC	1 cut(s)	341
TseI	GCWGC	8 cut(s)	246, 377, 380, 461, 902, 960, 1064, 1067
Tsp45I	GTSAC	1 cut(s)	341
TspGWI	ACGGA	3 cut(s)	97, 631, 1823
TspRI	CASTG	9 cut(s)	154, 367, 463, 634, 901, 1333, 1340, 1905, 2031
VneI	GTGCAC	1 cut(s)	363
VpaK11BI	GGWCC	2 cut(s)	163, 1935
VspI	ATTAAT	1 cut(s)	2046
XapI	RAATTY	2 cut(s)	475, 1772
XbaI	TCTAGA	1 cut(s)	790
XmaJI	CCTAGG	1 cut(s)	1852
XmnI	GAANNNNTTC	2 cut(s)	1642, 1834
XspI	CTAG	9 cut(s)	185, 791, 906, 1052, 1257, 1322, 1748, 1853, 1940
ZrmI	AGTACT	1 cut(s)	1255

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.