Rh7AG016700

Golgin candidate

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
1106572 .. 1111484
4913 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG016700.1

Sequence Viewer

Length: 1719 bp
ATGGCGAATTGGATCTCCTCCAAACTCAGAGCCGCCGAGACCATCCTCCAACAGATCGATCAGCAAGCGGCGGAGTCGTTACGGAAAAACGAGAAGCCTGTCGCCGACGACGACTTGAAGTTGGGCGCTCCGGCGAAAACCGGAGGCAGTGTGCCTCTGAAGGACCAGTTGAAGAAGAAAACCCTAGAAAATAGTGATTATAGCGGAAAATTAAGGAGCGATCCGAGCTTTAGCAGTGTTAATAGCAGCAATTATAGTAGTAGCGGTAATGAAAATAGTAGTAGTAATAATAAGGATAAACAGATTGTTGGAAAGGCGAAATCCGAGCCTCTTAGTGATAGTGACTGGACTCAACTTCTCAGTGCACCAAAGCCGGCAGCTGCTACTTCTACATCGAGCCGTGGCAATGGTTTGCACGGGGTTCGGGGTTTGAGGAAGGATGGTAGGAGGCAGGGCAGTGCTGCTTCTGCTTCGAATTTGGAGGTTAAGAAGAATCAGAAGAGTGGGATTGCTAATAATGTTATGAAGTCGGTGCAGAGGGCAGGTGTTGGGGAAGGTAGGAAGTTGAATGGGAGAGTGAGTGATGGGGAGGAGTCTGGTATTCCGGATTCAGCACGGAGGTTTTCCACTGGTGAATTGAAGAGTGATGGAAAGGTTATGGAAGGAGGTGAGTTGGATTATAGGGATGTGGCAGTGGACACTTCGGTTGAAATAAAAGGTAAGGCAAATGAAGAAAAGGGCGGAGCTTTTGATACGAAGGAGCTTTCATTGGAGGGTCGTCTAGAGTCAGTAAAGAAAAATGAAGGGTTGTCGGACAAGAAGATTGGAGGGCAGAGTATGAACGATCAGTTGAGAAGCAGTACTGTCAGGGGTAAGCATGAGTCCAGTGAAGCTGCTAGGAGTTCTACCTCCGAAGACTTCAAGAGAGGTTTTACTTCAGTAACTGATGGCAGCTCTGAGTCTGACTCAGATTCTGGTTCAAGTTCTGATTCTGAAAGTGAGCGTGAGAAGGAGGAAAGGAGAAAGCAGAGACAGAAGATTCTAGCTGAGAAAGCAGCAGCTAAAGCTGTGGAGGCCATTAAAGAGAAGGAAAATACGGTTGCCAGATTGGAAGGGGAGAAGCAGAGCTTGGAGAAAATACTTGAAGTTCAAGTGAAGCAACAAGCACAAGAGGCTTCAAAGCTACAAACGACGATGATGGAAACCATGGAAGCGGCTGATATAGAGAAGCAGAAACATAATAGTACTAGAATGGAAGCCTTTGTGCGTTTGGCTAAACTTGAGACTGCAAATGCTGACCTTGCGAAATCCCTAGCCACTGTGCAGTGGAATCTTGAACAGGAGGTCAATCATGTAGCAGAACTTAGACAGCAAGTTGAGTTAAAAGAAGTTAGCCATGAAGAACTCAGGAGGAAGATCTCTGATACTCATCAGATCGAAATATCTTTAAAGAAGGTAGCGGCTCCAAAAGGACTTGAACTTGAGCGAGAGATTTTGGAGGCAGAGTATGCTATTATAACTGATAAAGTTACACGACTGCAAGATAAGGCAAAGAAGCTGGAAGCAGACATTGAAATGACAAGGAAAGATATAGAGGATCCAACAGATATAGAAATTGAGCTCCAGCGAAGACTTTCTCAGATGACTGACCATTTGATTCAGAAACAAGCCCAGGTTTGTCATGTTTCTGAATTTCATGGGTCGATTATTCAATATTAG

Protein Analysis

572

Amino Acids

62.94

Weight (kDa)

6.27

Isoelectric Point (pI)

44.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1517
AarI CACCTGC 1 cut(s) 533
Acc36I ACCTGC 1 cut(s) 533
AccIII TCCGGA 1 cut(s) 604
AciI CCGC 8 cut(s) 33, 68, 71, 204, 264, 741, 1214, 1460
AclWI GGATC 4 cut(s) 20, 215, 1592, 1605
AcsI RAATTY 2 cut(s) 475, 1691
AcuI CTGAAG 2 cut(s) 179, 921
AfaI GTAC 2 cut(s) 862, 1246
AjnI CCWGG 1 cut(s) 1671
AjuI GAANNNNNNNTTGG 2 cut(s) 1112, 1144
Alw21I GWGCWC 2 cut(s) 367, 1623
Alw26I GTCTC 3 cut(s) 32, 1024, 1277
Alw44I GTGCAC 1 cut(s) 363
AlwI GGATC 4 cut(s) 20, 215, 1592, 1605
AlwNI CAGNNNCTG 2 cut(s) 944, 974
Aor13HI TCCGGA 1 cut(s) 604
AoxI GGCC 1 cut(s) 1074
ApaLI GTGCAC 1 cut(s) 363
ApeKI GCWGC 8 cut(s) 246, 377, 380, 461, 893, 951, 1055, 1058
ApoI RAATTY 2 cut(s) 475, 1691
ArsI GACNNNNNNTTYG 2 cut(s) 1636, 1668
Asp700I GAANNNNTTC 1 cut(s) 1633
AspLEI GCGC 1 cut(s) 128
AspS9I GGNCC 1 cut(s) 163
AsuHPI GGTGA 2 cut(s) 644, 680
AsuII TTCGAA 1 cut(s) 473
AvaII GGWCC 1 cut(s) 163
BaeGI GKGCMC 1 cut(s) 367
BamHI GGATCC 1 cut(s) 1597
BanII GRGCYC 1 cut(s) 1623
BbsI GAAGAC 2 cut(s) 921, 1636
Bbv12I GWGCWC 2 cut(s) 367, 1623
BbvI GCAGC 8 cut(s) 258, 367, 389, 448, 880, 963, 1067, 1070
BccI CCATC 6 cut(s) 50, 434, 578, 641, 941, 1192
BceAI ACGGC 1 cut(s) 384
BcgI CGANNNNNNTGC 2 cut(s) 404, 438
BciT130I CCWGG 1 cut(s) 1673
BcoDI GTCTC 3 cut(s) 32, 1024, 1277
BfaI CTAG 6 cut(s) 185, 782, 897, 1043, 1248, 1313
BfoI RGCGCY 1 cut(s) 129
BfuAI ACCTGC 1 cut(s) 533
BglII AGATCT 1 cut(s) 1416
BmcAI AGTACT 2 cut(s) 862, 1246
Bme1390I CCNGG 1 cut(s) 1673
Bme18I GGWCC 1 cut(s) 163
BmgT120I GGNCC 1 cut(s) 163
BmiI GGNNCC 2 cut(s) 1464, 1599
BmrFI CCNGG 1 cut(s) 1673
BpiI GAAGAC 2 cut(s) 921, 1636
BplI GAGNNNNNCTC 2 cut(s) 950, 982
BpmI CTGGAG 1 cut(s) 1607
Bpu14I TTCGAA 1 cut(s) 473
BpuEI CTTGAG 2 cut(s) 1301, 1502
Bsa29I ATCGAT 1 cut(s) 57
BsaBI GATNNNNATC 1 cut(s) 1428
BsaI GGTCTC 1 cut(s) 32
BsaJI CCNNGG 3 cut(s) 400, 1206, 1671
BsaWI WCCGGW 2 cut(s) 140, 604
BsaXI ACNNNNNCTCC 6 cut(s) 135, 165, 565, 595, 1490, 1520
Bse118I RCCGGY 1 cut(s) 373
Bse1I ACTGG 4 cut(s) 166, 350, 634, 885
Bse3DI GCAATG 1 cut(s) 412
Bse8I GATNNNNATC 1 cut(s) 1428
BseAI TCCGGA 1 cut(s) 604
BseBI CCWGG 1 cut(s) 1673
BseCI ATCGAT 1 cut(s) 57
BseDI CCNNGG 3 cut(s) 400, 1206, 1671
BseGI GGATG 3 cut(s) 42, 445, 691
BseJI GATNNNNATC 1 cut(s) 1428
BseMI GCAATG 1 cut(s) 412
BseMII CTCAG 7 cut(s) 40, 373, 948, 981, 1038, 1420, 1652
BseNI ACTGG 4 cut(s) 166, 350, 634, 885
BseRI GAGGAG 2 cut(s) 7, 605
BseSI GKGCMC 1 cut(s) 367
BseXI GCAGC 8 cut(s) 258, 367, 389, 448, 880, 963, 1067, 1070
BsgI GTGCAG 2 cut(s) 554, 1343
BshFI GGCC 1 cut(s) 1076
BshVI ATCGAT 1 cut(s) 57
BsiHKAI GWGCWC 2 cut(s) 367, 1623
BsiSI CCGG 4 cut(s) 131, 141, 374, 605
BsmAI GTCTC 3 cut(s) 32, 1024, 1277
BsnI GGCC 1 cut(s) 1076
Bso31I GGTCTC 1 cut(s) 32
Bsp119I TTCGAA 1 cut(s) 473
Bsp1286I GDGCHC 2 cut(s) 367, 1623
Bsp13I TCCGGA 1 cut(s) 604
Bsp143I GATC 8 cut(s) 12, 54, 58, 220, 844, 1416, 1434, 1597
Bsp19I CCATGG 1 cut(s) 1206
BspACI CCGC 8 cut(s) 33, 68, 71, 204, 264, 741, 1214, 1460
BspANI GGCC 1 cut(s) 1076
BspCNI CTCAG 7 cut(s) 39, 372, 949, 980, 1039, 1419, 1651
BspDI ATCGAT 1 cut(s) 57
BspEI TCCGGA 1 cut(s) 604
BspLI GGNNCC 2 cut(s) 1464, 1599
BspMI ACCTGC 1 cut(s) 533
BspPI GGATC 4 cut(s) 20, 215, 1592, 1605
BspT104I TTCGAA 1 cut(s) 473
BspTNI GGTCTC 1 cut(s) 32
BsrDI GCAATG 1 cut(s) 412
BsrFI RCCGGY 1 cut(s) 373
BsrI ACTGG 4 cut(s) 166, 350, 634, 885
BssAI RCCGGY 1 cut(s) 373
BssECI CCNNGG 3 cut(s) 400, 1206, 1671
BssMI GATC 8 cut(s) 12, 54, 58, 220, 844, 1416, 1434, 1597
BssT1I CCWWGG 1 cut(s) 1206
Bst2UI CCWGG 1 cut(s) 1673
Bst4CI ACNGT 3 cut(s) 865, 1099, 1321
Bst6I CTCTTC 2 cut(s) 494, 635
BstAPI GCANNNNNTGC 1 cut(s) 1508
BstBI TTCGAA 1 cut(s) 473
BstC8I GCNNGC 2 cut(s) 66, 375
BstDEI CTNAG 9 cut(s) 26, 332, 359, 957, 967, 1047, 1364, 1406, 1638
BstDSI CCRYGG 2 cut(s) 400, 1206
BstF5I GGATG 3 cut(s) 42, 445, 691
BstH2I RGCGCY 1 cut(s) 129
BstHHI GCGC 1 cut(s) 128
BstKTI GATC 8 cut(s) 15, 57, 61, 223, 847, 1419, 1437, 1600
BstMAI GTCTC 3 cut(s) 32, 1024, 1277
BstMBI GATC 8 cut(s) 12, 54, 58, 220, 844, 1416, 1434, 1597
BstMWI GCNNNNNNNGC 8 cut(s) 225, 467, 1052, 1064, 1073, 1172, 1301, 1508
BstNI CCWGG 1 cut(s) 1673
BstSCI CCNGG 1 cut(s) 1671
BstSLI GKGCMC 1 cut(s) 367
BstV1I GCAGC 8 cut(s) 258, 367, 389, 448, 880, 963, 1067, 1070
BstV2I GAAGAC 2 cut(s) 921, 1636
BstX2I RGATCY 3 cut(s) 12, 1416, 1597
BstYI RGATCY 3 cut(s) 12, 1416, 1597
Bsu15I ATCGAT 1 cut(s) 57
BsuRI GGCC 1 cut(s) 1076
BsuTUI ATCGAT 1 cut(s) 57
BtgI CCRYGG 2 cut(s) 400, 1206
BtsCI GGATG 3 cut(s) 42, 445, 691
BtsI GCAGTG 5 cut(s) 154, 241, 463, 699, 1331
BtsIMutI CAGTG 9 cut(s) 154, 241, 367, 463, 627, 699, 892, 1317, 1331
BveI ACCTGC 1 cut(s) 533
Cac8I GCNNGC 2 cut(s) 66, 375
CaiI CAGNNNCTG 2 cut(s) 944, 974
CfoI GCGC 1 cut(s) 128
Cfr10I RCCGGY 1 cut(s) 373
Cfr13I GGNCC 1 cut(s) 163
ClaI ATCGAT 1 cut(s) 57
Csp6I GTAC 2 cut(s) 861, 1245
CviAII CATG 6 cut(s) 878, 1207, 1352, 1397, 1682, 1697
CviQI GTAC 2 cut(s) 861, 1245
DdeI CTNAG 9 cut(s) 26, 332, 359, 957, 967, 1047, 1364, 1406, 1638
DpnI GATC 8 cut(s) 14, 56, 60, 222, 846, 1418, 1436, 1599
DpnII GATC 8 cut(s) 12, 54, 58, 220, 844, 1416, 1434, 1597
DraI TTTAAA 1 cut(s) 1449
Eam1104I CTCTTC 2 cut(s) 494, 635
EarI CTCTTC 2 cut(s) 494, 635
EciI GGCGGA 2 cut(s) 86, 756
Ecl136II GAGCTC 1 cut(s) 1621
Eco130I CCWWGG 1 cut(s) 1206
Eco24I GRGCYC 1 cut(s) 1623
Eco31I GGTCTC 1 cut(s) 32
Eco47I GGWCC 1 cut(s) 163
Eco53kI GAGCTC 1 cut(s) 1621
Eco57I CTGAAG 2 cut(s) 179, 921
EcoICRI GAGCTC 1 cut(s) 1621
EcoRII CCWGG 1 cut(s) 1671
EcoT14I CCWWGG 1 cut(s) 1206
EcoT38I GRGCYC 1 cut(s) 1623
ErhI CCWWGG 1 cut(s) 1206
FaeI CATG 6 cut(s) 881, 1210, 1355, 1400, 1685, 1700
FalI AAGNNNNNCTT 2 cut(s) 1112, 1144
FatI CATG 6 cut(s) 877, 1206, 1351, 1396, 1681, 1696
FokI GGATG 3 cut(s) 29, 452, 698
FriOI GRGCYC 1 cut(s) 1623
FspBI CTAG 6 cut(s) 185, 782, 897, 1043, 1248, 1313
GlaI GCGC 1 cut(s) 127
GsuI CTGGAG 1 cut(s) 1607
HaeII RGCGCY 1 cut(s) 129
HaeIII GGCC 1 cut(s) 1076
HapII CCGG 4 cut(s) 131, 141, 374, 605
HhaI GCGC 1 cut(s) 128
Hin1II CATG 6 cut(s) 881, 1210, 1355, 1400, 1685, 1700
Hin6I GCGC 1 cut(s) 126
HinP1I GCGC 1 cut(s) 126
HpaII CCGG 4 cut(s) 131, 141, 374, 605
HphI GGTGA 2 cut(s) 644, 680
Hpy166II GTNNAC 2 cut(s) 365, 697
Hpy188III TCNNGA 5 cut(s) 605, 782, 922, 1334, 1408
Hpy8I GTNNAC 2 cut(s) 365, 697
Hpy99I CGWCG 3 cut(s) 110, 113, 1195
HpyCH4III ACNGT 3 cut(s) 865, 1099, 1321
HpyCH4V TGCA 6 cut(s) 365, 415, 535, 1289, 1324, 1540
HpyF10VI GCNNNNNNNGC 8 cut(s) 225, 467, 1052, 1064, 1073, 1172, 1301, 1508
HpyF3I CTNAG 9 cut(s) 26, 332, 359, 957, 967, 1047, 1364, 1406, 1638
Hsp92II CATG 6 cut(s) 881, 1210, 1355, 1400, 1685, 1700
HspAI GCGC 1 cut(s) 126
Kpn2I TCCGGA 1 cut(s) 604
KroI GCCGGC 1 cut(s) 373
KroNI GCCGGC 1 cut(s) 375
Kzo9I GATC 8 cut(s) 12, 54, 58, 220, 844, 1416, 1434, 1597
LmnI GCTCC 6 cut(s) 133, 216, 743, 760, 1468, 1626
Lsp1109I GCAGC 8 cut(s) 258, 367, 389, 448, 880, 963, 1067, 1070
MaeI CTAG 6 cut(s) 185, 782, 897, 1043, 1248, 1313
MaeIII GTNAC 4 cut(s) 78, 341, 940, 1528
MalI GATC 8 cut(s) 14, 56, 60, 222, 846, 1418, 1436, 1599
MboI GATC 8 cut(s) 12, 54, 58, 220, 844, 1416, 1434, 1597
MflI RGATCY 3 cut(s) 12, 1416, 1597
MhlI GDGCHC 2 cut(s) 367, 1623
MluCI AATT 7 cut(s) 7, 209, 250, 475, 635, 1614, 1691
MlyI GAGTC 7 cut(s) 83, 343, 602, 794, 890, 959, 968
MmeI TCCRAC 5 cut(s) 73, 289, 654, 792, 1625
MroI TCCGGA 1 cut(s) 604
MroNI GCCGGC 1 cut(s) 373
MroXI GAANNNNTTC 1 cut(s) 1633
MseI TTAA 6 cut(s) 212, 240, 486, 1080, 1382, 1448
MslI CAYNNNNRTG 1 cut(s) 1574
MspA1I CMGCKG 1 cut(s) 380
MspI CCGG 4 cut(s) 131, 141, 374, 605
MspR9I CCNGG 1 cut(s) 1673
MvaI CCWGG 1 cut(s) 1673
MwoI GCNNNNNNNGC 8 cut(s) 225, 467, 1052, 1064, 1073, 1172, 1301, 1508
NaeI GCCGGC 1 cut(s) 375
NcoI CCATGG 1 cut(s) 1206
NdeII GATC 8 cut(s) 12, 54, 58, 220, 844, 1416, 1434, 1597
NgoMIV GCCGGC 1 cut(s) 373
NlaIII CATG 6 cut(s) 881, 1210, 1355, 1400, 1685, 1700
NlaIV GGNNCC 2 cut(s) 1464, 1599
NmeAIII GCCGAG 1 cut(s) 61
NmuCI GTSAC 1 cut(s) 341
NspV TTCGAA 1 cut(s) 473
PaqCI CACCTGC 1 cut(s) 533
PcsI WCGNNNNNNNCGW 1 cut(s) 108
PdiI GCCGGC 1 cut(s) 375
PdmI GAANNNNTTC 1 cut(s) 1633
PfeI GAWTC 7 cut(s) 493, 608, 971, 989, 1039, 1330, 1657
PleI GAGTC 7 cut(s) 82, 343, 601, 793, 889, 959, 967
PpsI GAGTC 7 cut(s) 82, 343, 601, 793, 889, 959, 967
PsiI TTATAA 1 cut(s) 1517
Psp124BI GAGCTC 1 cut(s) 1623
Psp6I CCWGG 1 cut(s) 1671
PspGI CCWGG 1 cut(s) 1671
PspN4I GGNNCC 2 cut(s) 1464, 1599
PspPI GGNCC 1 cut(s) 163
PstNI CAGNNNCTG 2 cut(s) 944, 974
PsuI RGATCY 3 cut(s) 12, 1416, 1597
PvuII CAGCTG 1 cut(s) 380
RsaI GTAC 2 cut(s) 862, 1246
RsaNI GTAC 2 cut(s) 861, 1245
RseI CAYNNNNRTG 1 cut(s) 1574
SacI GAGCTC 1 cut(s) 1623
SaqAI TTAA 6 cut(s) 212, 240, 486, 1080, 1382, 1448
Sau3AI GATC 8 cut(s) 12, 54, 58, 220, 844, 1416, 1434, 1597
Sau96I GGNCC 1 cut(s) 163
ScaI AGTACT 2 cut(s) 862, 1246
SchI GAGTC 7 cut(s) 83, 343, 602, 794, 890, 959, 968
ScrFI CCNGG 1 cut(s) 1673
SduI GDGCHC 2 cut(s) 367, 1623
SfuI TTCGAA 1 cut(s) 473
SinI GGWCC 1 cut(s) 163
SmiMI CAYNNNNRTG 1 cut(s) 1574
SmlI CTYRAG 2 cut(s) 1280, 1481
SmoI CTYRAG 2 cut(s) 1280, 1481
Sse9I AATT 7 cut(s) 7, 209, 250, 475, 635, 1614, 1691
SsiI CCGC 8 cut(s) 33, 68, 71, 204, 264, 741, 1214, 1460
SspI AATATT 1 cut(s) 1715
SspMI CTAG 6 cut(s) 185, 782, 897, 1043, 1248, 1313
SstI GAGCTC 1 cut(s) 1623
StyD4I CCNGG 1 cut(s) 1671
StyI CCWWGG 1 cut(s) 1206
TaaI ACNGT 3 cut(s) 865, 1099, 1321
TaqI TCGA 5 cut(s) 57, 395, 473, 1437, 1703
TasI AATT 7 cut(s) 7, 209, 250, 475, 635, 1614, 1691
TatI WGTACW 2 cut(s) 860, 1244
TauI GCSGC 4 cut(s) 35, 71, 1217, 1463
TfiI GAWTC 7 cut(s) 493, 608, 971, 989, 1039, 1330, 1657
Tru1I TTAA 6 cut(s) 212, 240, 486, 1080, 1382, 1448
Tru9I TTAA 6 cut(s) 212, 240, 486, 1080, 1382, 1448
TscAI CASTG 9 cut(s) 154, 241, 367, 463, 634, 699, 892, 1324, 1331
TseFI GTSAC 1 cut(s) 341
TseI GCWGC 8 cut(s) 246, 377, 380, 461, 893, 951, 1055, 1058
Tsp45I GTSAC 1 cut(s) 341
TspDTI ATGAA 8 cut(s) 285, 539, 744, 756, 816, 854, 1413, 1685
TspGWI ACGGA 2 cut(s) 97, 631
TspRI CASTG 9 cut(s) 154, 241, 367, 463, 634, 699, 892, 1324, 1331
VneI GTGCAC 1 cut(s) 363
VpaK11BI GGWCC 1 cut(s) 163
XapI RAATTY 2 cut(s) 475, 1691
XbaI TCTAGA 1 cut(s) 781
XmnI GAANNNNTTC 1 cut(s) 1633
XspI CTAG 6 cut(s) 185, 782, 897, 1043, 1248, 1313
ZrmI AGTACT 2 cut(s) 862, 1246
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.