Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0007794

Physical Location & Seq

Genomic Coordinates Reverse (-)

7707366 .. 7710884

Gene Structure 3519 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G041200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 975 bp

ATGGCGCTAATGGCAACCAGAACAAAGCTCTTTAGGCTGCTGACGACTCTCACCACGAAAGCACCAATTTTGGGATCTGGGTCTTGCTCCAATGGCGTTAAGGGACCGGTTCGGGTCGACCGGGGAGGTGGGCTCGGGTTGACGGCCTATTCGACCTCTGCTGTGGCACAGCAAGAGCCAGGGGTCGTTGGGTCGAGGCACATGGGTTTGGAGATATTGGGTGTGAAAGATTATGAAGATTATAGGAGGTCTCTTTATGGTGAAATCACCCACAAGGCTCTGCTTGTTGATGCTGTTGGCACCCTTGTTGTTCCTTCCCAGCCAATGGCTCAGATATATAGGAAGATAGGCGAGAAGTATGGAGTGGAGTACTCAGAGGCTGAGATTTTGAACAGATACAGAAGGGCTTACGAGCAGCCTTGGGGTAGATCTCGTCTCAGGTATGTAAATGATGGGAGACCCTTCTGGCAATATATAGTCAGTTCTTCCACTGGCTGTTCAGATTCCCAGTACTTTGAAGAACTTTATAACTACTATACAACTAACAAGGCTTGGCACCTCTGTGATCCTGATGCTGAGAAAGTGTTTCAAGCTCTGAGAAAAGCAGGCGTCAAAGTAGCTGTTGTGTCAAATTTTGATACTCGATTAAGACCTCTTTTGCAGGCTCTAAATTGTGAACATTGGTTTGATGCGGTAGCAGTATCAGCCGAAGTTGAAGCAGAGAAGCCAAATCCAACAATATTTCTTAAAGCTTGTGAATTATTAGGAGTAAAACCTGAGGATGCAGTGCATGTGGGAGATGATCGTAGGAATGATATATGGGGTGCCAGAGATGCAGGCTGTGATGCTTGGCTTTGGGGAAGTGATGTTCACTCCTTTAAGGAGTTTAACACTCTTCCTCATTTGGTGGCCCGACATGAATTTGATTGGAGTTTAGTCCAAGCCGGTCCTTATGAGTTCCACCCCTATAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HAD_2

Protein Analysis

325

Amino Acids

36.48

Weight (kDa)

6.76

Isoelectric Point (pI)

36.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007794)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41250
fragaria_vesca	FvH4_6g25490 FvH4_6g25490 FvH4_6g25490 FvH4_6g25490 FvH4_6g25490
malus_domestica	MD12G1093300.v1.1 MD14G1085300.v1.1
prunus_persica	Prupe.7G041200_v2.0.a1 Prupe.7G041200_v2.0.a1 Prupe.7G041200_v2.0.a1 Prupe.7G041200_v2.0.a1
pyrus_communis	pycom12g07860 pycom14g07490
rosa_chinensis	RchiOBHm_Chr2g0125431
rosa_laevigata	RLG00000018866
rosa_multiflora	Rmu_sc0005508.1_g000001
rosa_roxburghii	Rroxscaffold_2G00118000
rosa_rugosa	Rorug02G0257400
rosa_samantha	Rh2AG316300 Rh2BG323800 Rh2CG306000 Rh2DG342400
rosa_wichuraiana	Rw2G025500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	528
AccB1I	GGYRCC	3 cut(s)	299, 555, 824
AccB7I	CCANNNNNTGG	1 cut(s)	325
AccI	GTMKAC	1 cut(s)	117
AciI	CCGC	1 cut(s)	692
AclWI	GGATC	2 cut(s)	82, 560
AcsI	RAATTY	2 cut(s)	631, 920
AcyI	GRCGYC	1 cut(s)	609
AfaI	GTAC	2 cut(s)	371, 512
AfiI	CCNNNNNNNGG	2 cut(s)	71, 325
AgeI	ACCGGT	1 cut(s)	106
AgsI	TTSAA	4 cut(s)	391, 518, 590, 716
AjnI	CCWGG	1 cut(s)	178
AleI	CACNNNNGTG	1 cut(s)	561
AloI	GAACNNNNNNTCC	2 cut(s)	852, 884
AluBI	AGCT	4 cut(s)	28, 593, 620, 752
AluI	AGCT	4 cut(s)	28, 593, 620, 752
Alw26I	GTCTC	3 cut(s)	255, 440, 451
AlwI	GGATC	2 cut(s)	82, 560
AlwNI	CAGNNNCTG	1 cut(s)	380
Ama87I	CYCGRG	1 cut(s)	134
AoxI	GGCC	2 cut(s)	144, 909
ApeKI	GCWGC	2 cut(s)	37, 415
ApoI	RAATTY	2 cut(s)	631, 920
ArsI	GACNNNNNNTTYG	2 cut(s)	133, 165
AsiGI	ACCGGT	1 cut(s)	106
AspLEI	GCGC	1 cut(s)	7
AspS9I	GGNCC	3 cut(s)	104, 910, 947
AsuC2I	CCSGG	1 cut(s)	122
AsuHPI	GGTGA	3 cut(s)	43, 259, 272
AvaI	CYCGRG	1 cut(s)	134
AvaII	GGWCC	2 cut(s)	104, 947
AxyI	CCTNAGG	1 cut(s)	777
BanI	GGYRCC	3 cut(s)	299, 555, 824
BanII	GRGCYC	1 cut(s)	135
BbvI	GCAGC	2 cut(s)	24, 427
BccI	CCATC	1 cut(s)	446
BceAI	ACGGC	1 cut(s)	159
BciT130I	CCWGG	1 cut(s)	180
BcnI	CCSGG	1 cut(s)	122
BcoDI	GTCTC	3 cut(s)	255, 440, 451
BfmI	CTRYAG	1 cut(s)	967
BfoI	RGCGCY	1 cut(s)	8
BglII	AGATCT	1 cut(s)	428
BisI	GCNGC	2 cut(s)	38, 416
BlsI	GCNGC	2 cut(s)	39, 417
BmcAI	AGTACT	2 cut(s)	371, 512
Bme1390I	CCNGG	2 cut(s)	122, 180
Bme18I	GGWCC	2 cut(s)	104, 947
BmeT110I	CYCGRG	1 cut(s)	134
BmgT120I	GGNCC	3 cut(s)	104, 910, 947
BmiI	GGNNCC	4 cut(s)	105, 301, 557, 826
BmrFI	CCNGG	2 cut(s)	122, 180
BmrI	ACTGGG	1 cut(s)	502
BmsI	GCATC	6 cut(s)	280, 562, 679, 772, 823, 835
BmuI	ACTGGG	1 cut(s)	502
BplI	GAGNNNNNCTC	2 cut(s)	117, 149
BpuMI	CCSGG	1 cut(s)	122
BsaHI	GRCGYC	1 cut(s)	609
BsaI	GGTCTC	2 cut(s)	255, 451
BsaJI	CCNNGG	3 cut(s)	121, 179, 419
BsaWI	WCCGGW	1 cut(s)	106
Bsc4I	CCNNNNNNNGG	2 cut(s)	71, 325
Bse118I	RCCGGY	2 cut(s)	106, 944
Bse1I	ACTGG	2 cut(s)	496, 508
Bse21I	CCTNAGG	1 cut(s)	777
BseBI	CCWGG	1 cut(s)	180
BseDI	CCNNGG	3 cut(s)	121, 179, 419
BseGI	GGATG	1 cut(s)	787
BseLI	CCNNNNNNNGG	2 cut(s)	71, 325
BseMII	CTCAG	7 cut(s)	344, 372, 387, 451, 567, 587, 768
BseNI	ACTGG	2 cut(s)	496, 508
BseXI	GCAGC	2 cut(s)	24, 427
BseYI	CCCAGC	1 cut(s)	318
Bsh1285I	CGRYCG	1 cut(s)	121
BshFI	GGCC	2 cut(s)	146, 911
BshNI	GGYRCC	3 cut(s)	299, 555, 824
BshTI	ACCGGT	1 cut(s)	106
BsiEI	CGRYCG	1 cut(s)	121
BsiHKCI	CYCGRG	1 cut(s)	134
BsiSI	CCGG	3 cut(s)	107, 121, 945
BslFI	GGGAC	1 cut(s)	117
BslI	CCNNNNNNNGG	2 cut(s)	71, 325
BsmAI	GTCTC	3 cut(s)	255, 440, 451
BsmBI	CGTCTC	1 cut(s)	440
BsmFI	GGGAC	1 cut(s)	117
BsnI	GGCC	2 cut(s)	146, 911
Bso31I	GGTCTC	2 cut(s)	255, 451
BsoBI	CYCGRG	1 cut(s)	134
Bsp1286I	GDGCHC	1 cut(s)	135
Bsp143I	GATC	4 cut(s)	74, 428, 565, 802
BspACI	CCGC	1 cut(s)	692
BspANI	GGCC	2 cut(s)	146, 911
BspCNI	CTCAG	7 cut(s)	343, 373, 386, 450, 568, 588, 769
BspLI	GGNNCC	4 cut(s)	105, 301, 557, 826
BspPI	GGATC	2 cut(s)	82, 560
BspT107I	GGYRCC	3 cut(s)	299, 555, 824
BspTNI	GGTCTC	2 cut(s)	255, 451
BsrFI	RCCGGY	2 cut(s)	106, 944
BsrI	ACTGG	2 cut(s)	496, 508
BssAI	RCCGGY	2 cut(s)	106, 944
BssECI	CCNNGG	3 cut(s)	121, 179, 419
BssMI	GATC	4 cut(s)	74, 428, 565, 802
BssNI	GRCGYC	1 cut(s)	609
BssT1I	CCWWGG	1 cut(s)	419
Bst2UI	CCWGG	1 cut(s)	180
Bst6I	CTCTTC	1 cut(s)	900
BstACI	GRCGYC	1 cut(s)	609
BstC8I	GCNNGC	3 cut(s)	607, 663, 838
BstDEI	CTNAG	7 cut(s)	330, 373, 381, 437, 576, 596, 777
BstF5I	GGATG	1 cut(s)	787
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	1 cut(s)	7
BstKTI	GATC	4 cut(s)	77, 431, 568, 805
BstMAI	GTCTC	3 cut(s)	255, 440, 451
BstMBI	GATC	4 cut(s)	74, 428, 565, 802
BstMCI	CGRYCG	1 cut(s)	121
BstMWI	GCNNNNNNNGC	5 cut(s)	11, 34, 93, 704, 833
BstNI	CCWGG	1 cut(s)	180
BstNSI	RCATGY	1 cut(s)	794
BstSCI	CCNGG	2 cut(s)	120, 178
BstSFI	CTRYAG	1 cut(s)	967
BstV1I	GCAGC	2 cut(s)	24, 427
BstX2I	RGATCY	2 cut(s)	74, 428
BstYI	RGATCY	2 cut(s)	74, 428
Bsu36I	CCTNAGG	1 cut(s)	777
BsuRI	GGCC	2 cut(s)	146, 911
BtsCI	GGATG	1 cut(s)	787
BtsI	GCAGTG	1 cut(s)	792
BtsIMutI	CAGTG	2 cut(s)	489, 792
Cac8I	GCNNGC	3 cut(s)	607, 663, 838
CaiI	CAGNNNCTG	1 cut(s)	380
CfoI	GCGC	1 cut(s)	7
Cfr10I	RCCGGY	2 cut(s)	106, 944
Cfr13I	GGNCC	3 cut(s)	104, 910, 947
CseI	GACGC	1 cut(s)	598
Csp6I	GTAC	2 cut(s)	370, 511
CspAI	ACCGGT	1 cut(s)	106
CviAII	CATG	3 cut(s)	202, 791, 917
CviQI	GTAC	2 cut(s)	370, 511
DdeI	CTNAG	7 cut(s)	330, 373, 381, 437, 576, 596, 777
DpnI	GATC	4 cut(s)	76, 430, 567, 804
DpnII	GATC	4 cut(s)	74, 428, 565, 802
Eam1104I	CTCTTC	1 cut(s)	900
EarI	CTCTTC	1 cut(s)	900
Eco130I	CCWWGG	1 cut(s)	419
Eco24I	GRGCYC	1 cut(s)	135
Eco31I	GGTCTC	2 cut(s)	255, 451
Eco47I	GGWCC	2 cut(s)	104, 947
Eco81I	CCTNAGG	1 cut(s)	777
Eco88I	CYCGRG	1 cut(s)	134
EcoRII	CCWGG	1 cut(s)	178
EcoT14I	CCWWGG	1 cut(s)	419
EcoT38I	GRGCYC	1 cut(s)	135
ErhI	CCWWGG	1 cut(s)	419
Esp3I	CGTCTC	1 cut(s)	440
FaeI	CATG	3 cut(s)	205, 794, 920
FaqI	GGGAC	1 cut(s)	117
FatI	CATG	3 cut(s)	201, 790, 916
FblI	GTMKAC	1 cut(s)	117
Fnu4HI	GCNGC	2 cut(s)	38, 416
FokI	GGATG	1 cut(s)	794
FriOI	GRGCYC	1 cut(s)	135
Fsp4HI	GCNGC	2 cut(s)	38, 416
GlaI	GCGC	1 cut(s)	6
GluI	GCNGC	2 cut(s)	38, 416
GsaI	CCCAGC	1 cut(s)	322
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	2 cut(s)	146, 911
HapII	CCGG	3 cut(s)	107, 121, 945
HgaI	GACGC	1 cut(s)	598
HhaI	GCGC	1 cut(s)	7
Hin1I	GRCGYC	1 cut(s)	609
Hin1II	CATG	3 cut(s)	205, 794, 920
Hin6I	GCGC	1 cut(s)	5
HinP1I	GCGC	1 cut(s)	5
HincII	GTYRAC	2 cut(s)	118, 141
HindII	GTYRAC	2 cut(s)	118, 141
HindIII	AAGCTT	1 cut(s)	750
HinfI	GANTC	2 cut(s)	46, 503
HpaII	CCGG	3 cut(s)	107, 121, 945
HphI	GGTGA	3 cut(s)	43, 259, 272
Hpy166II	GTNNAC	4 cut(s)	118, 141, 677, 871
Hpy188I	TCNGA	4 cut(s)	333, 376, 502, 597
Hpy188III	TCNNGA	1 cut(s)	569
Hpy8I	GTNNAC	4 cut(s)	118, 141, 677, 871
HpyAV	CCTTC	3 cut(s)	324, 396, 472
HpyCH4V	TGCA	4 cut(s)	661, 785, 790, 836
HpyF10VI	GCNNNNNNNGC	5 cut(s)	11, 34, 93, 704, 833
HpyF3I	CTNAG	7 cut(s)	330, 373, 381, 437, 576, 596, 777
Hsp92I	GRCGYC	1 cut(s)	609
Hsp92II	CATG	3 cut(s)	205, 794, 920
HspAI	GCGC	1 cut(s)	5
Kzo9I	GATC	4 cut(s)	74, 428, 565, 802
LmnI	GCTCC	1 cut(s)	92
Lsp1109I	GCAGC	2 cut(s)	24, 427
LweI	GCATC	6 cut(s)	280, 562, 679, 772, 823, 835
MalI	GATC	4 cut(s)	76, 430, 567, 804
MboI	GATC	4 cut(s)	74, 428, 565, 802
MboII	GAAGA	5 cut(s)	248, 355, 477, 530, 887
MflI	RGATCY	2 cut(s)	74, 428
MhlI	GDGCHC	1 cut(s)	135
MluCI	AATT	5 cut(s)	66, 631, 670, 758, 920
MlyI	GAGTC	1 cut(s)	40
MmeI	TCCRAC	1 cut(s)	758
MnlI	CCTC	9 cut(s)	119, 166, 189, 240, 370, 569, 663, 772, 909
MseI	TTAA	5 cut(s)	99, 647, 747, 879, 888
MslI	CAYNNNNRTG	1 cut(s)	561
MspI	CCGG	3 cut(s)	107, 121, 945
MspR9I	CCNGG	2 cut(s)	122, 180
MvaI	CCWGG	1 cut(s)	180
MwoI	GCNNNNNNNGC	5 cut(s)	11, 34, 93, 704, 833
NciI	CCSGG	1 cut(s)	122
NdeII	GATC	4 cut(s)	74, 428, 565, 802
NlaIII	CATG	3 cut(s)	205, 794, 920
NlaIV	GGNNCC	4 cut(s)	105, 301, 557, 826
NspI	RCATGY	1 cut(s)	794
OliI	CACNNNNGTG	1 cut(s)	561
PcsI	WCGNNNNNNNCGW	1 cut(s)	149
PfeI	GAWTC	1 cut(s)	503
PflMI	CCANNNNNTGG	1 cut(s)	325
PinAI	ACCGGT	1 cut(s)	106
PkrI	GCNGC	2 cut(s)	39, 417
PleI	GAGTC	1 cut(s)	40
PpsI	GAGTC	1 cut(s)	40
PsiI	TTATAA	1 cut(s)	528
Psp6I	CCWGG	1 cut(s)	178
PspFI	CCCAGC	1 cut(s)	318
PspGI	CCWGG	1 cut(s)	178
PspN4I	GGNNCC	4 cut(s)	105, 301, 557, 826
PspPI	GGNCC	3 cut(s)	104, 910, 947
PstNI	CAGNNNCTG	1 cut(s)	380
PsuI	RGATCY	2 cut(s)	74, 428
RsaI	GTAC	2 cut(s)	371, 512
RsaNI	GTAC	2 cut(s)	370, 511
RseI	CAYNNNNRTG	1 cut(s)	561
SalI	GTCGAC	1 cut(s)	116
SaqAI	TTAA	5 cut(s)	99, 647, 747, 879, 888
SatI	GCNGC	2 cut(s)	38, 416
Sau3AI	GATC	4 cut(s)	74, 428, 565, 802
Sau96I	GGNCC	3 cut(s)	104, 910, 947
ScaI	AGTACT	2 cut(s)	371, 512
SchI	GAGTC	1 cut(s)	40
ScrFI	CCNGG	2 cut(s)	122, 180
SduI	GDGCHC	1 cut(s)	135
SfaNI	GCATC	6 cut(s)	280, 562, 679, 772, 823, 835
SfcI	CTRYAG	1 cut(s)	967
SinI	GGWCC	2 cut(s)	104, 947
SmiMI	CAYNNNNRTG	1 cut(s)	561
Sse9I	AATT	5 cut(s)	66, 631, 670, 758, 920
SsiI	CCGC	1 cut(s)	692
SspI	AATATT	1 cut(s)	741
StyD4I	CCNGG	2 cut(s)	120, 178
StyI	CCWWGG	1 cut(s)	419
TaqI	TCGA	4 cut(s)	117, 152, 194, 643
TasI	AATT	5 cut(s)	66, 631, 670, 758, 920
TatI	WGTACW	2 cut(s)	369, 510
TfiI	GAWTC	1 cut(s)	503
Tru1I	TTAA	5 cut(s)	99, 647, 747, 879, 888
Tru9I	TTAA	5 cut(s)	99, 647, 747, 879, 888
TscAI	CASTG	2 cut(s)	496, 792
TseI	GCWGC	2 cut(s)	37, 415
TspDTI	ATGAA	2 cut(s)	249, 933
TspRI	CASTG	2 cut(s)	496, 792
Van91I	CCANNNNNTGG	1 cut(s)	325
VpaK11BI	GGWCC	2 cut(s)	104, 947
XapI	RAATTY	2 cut(s)	631, 920
XceI	RCATGY	1 cut(s)	794
XmiI	GTMKAC	1 cut(s)	117
ZrmI	AGTACT	2 cut(s)	371, 512

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.