Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0010131

Physical Location & Seq

Genomic Coordinates Reverse (-)

11633615 .. 11635669

Gene Structure 2055 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G081100.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 831 bp

ATGAATTCTGTTTTCTCATCACAGTCCCTTTGCATTCCCCTAGCTAGCTTCCAGTTGCTACCTTGTCTTCAAACACAACCTCATTATACGTTCCCCAACCGTGTCTGTTATCGGAATCGTTGCATCTCTCCTCTTTCTCTTTCCTTTCCTTTCATTTCGCATCAGGCTTTGCATGCTCGGCAATCATTTTGTGGTGCTACAGCTCCACCAGATGAAGGAGTAGTCTCTGTAATCAACTTCGACGATTTTGCTGAGAAAGACTGGTCCTTTCTTGATTCCGCTGATTTCAGTTCTGGACCAGATTATAACCTAAACATTGATCGCATTATAACTGCGGGAGAAATTGAAGAAACTTCAAGAGTTATGGTTTCAATTGGTTCCGAAGGATTTGTAGATCGGGTGGTTGAATCTTCACCCTGCAATCTCTTGCTTGTTGTCCATGATTCACTTTTTGTGTTAGCTGGCATTAAAGAAAAATATGACAAGGTTAAGTGTTGGCAAGGAGAATTAATATATGTGCCTGATAAGTGGGCACCTTTAGATGTTGTGTTCCTTTATTTCCTTCCAGCCATGCCCTTTACACTTGATGAGGCGTTTGGAGCACTTGCAAGGTGTTTTTTGGCAGGTGCAAGACTGGTTATTAGCCATCCCCAAGGAAGAGAAGTTTTAGAGCAACAACGACAACAATATCCAGATGTTGTAACTTCTGACTTGCCTGAGAAGAAGACTTTACAGGAAGTTGCAGCACAACATTCTTTCGAGTTAACCGACTATGTCGACGAGCCTGGTTTTTATCTTGCTGTATTAAAGTTTAGTGGGGCAAGAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

277

Amino Acids

30.92

Weight (kDa)

4.82

Isoelectric Point (pI)

43.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010131)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41950
fragaria_vesca	FvH4_6g21880 FvH4_6g21880 FvH4_6g21880
malus_domestica	MD12G1054600.v1.1 MD14G1054000.v1.1
prunus_persica	Prupe.7G081100_v2.0.a1 Prupe.7G081100_v2.0.a1 Prupe.7G081100_v2.0.a1
pyrus_communis	pycom14g04450
rosa_chinensis	RchiOBHm_Chr3g0479231
rosa_laevigata	RLG00000023592
rosa_multiflora	Rmu_sc0002978.1_g000011
rosa_roxburghii	Rroxscaffold_6G00402510
rosa_rugosa	Rorug03G0172900
rosa_samantha	Rh3AG224100 Rh3BG257000 Rh3CG252600 Rh3DG248800
rosa_wichuraiana	Rw3G020080 Rw3G020510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	306, 329
AarI	CACCTGC	1 cut(s)	614
Acc36I	ACCTGC	1 cut(s)	614
AccB1I	GGYRCC	1 cut(s)	532
AccI	GTMKAC	1 cut(s)	777
AciI	CCGC	2 cut(s)	279, 335
AcsI	RAATTY	1 cut(s)	4
AfiI	CCNNNNNNNGG	1 cut(s)	215
AgsI	TTSAA	5 cut(s)	71, 347, 357, 372, 407
AjnI	CCWGG	1 cut(s)	784
AluBI	AGCT	4 cut(s)	44, 48, 203, 461
AluI	AGCT	4 cut(s)	44, 48, 203, 461
Alw21I	GWGCWC	1 cut(s)	604
Alw26I	GTCTC	1 cut(s)	229
ApeKI	GCWGC	1 cut(s)	743
ApoI	RAATTY	1 cut(s)	4
AseI	ATTAAT	1 cut(s)	509
AspS9I	GGNCC	2 cut(s)	264, 296
AsuHPI	GGTGA	1 cut(s)	405
AsuNHI	GCTAGC	1 cut(s)	44
AvaII	GGWCC	2 cut(s)	264, 296
BaeGI	GKGCMC	1 cut(s)	535
BanI	GGYRCC	1 cut(s)	532
BbsI	GAAGAC	2 cut(s)	59, 731
Bbv12I	GWGCWC	1 cut(s)	604
BbvI	GCAGC	1 cut(s)	755
BccI	CCATC	1 cut(s)	654
BcgI	CGANNNNNNTGC	2 cut(s)	230, 264
BciT130I	CCWGG	1 cut(s)	786
BcoDI	GTCTC	1 cut(s)	229
BfaI	CTAG	2 cut(s)	41, 45
BfmI	CTRYAG	1 cut(s)	198
BfuAI	ACCTGC	1 cut(s)	614
BisI	GCNGC	1 cut(s)	744
BlsI	GCNGC	1 cut(s)	745
Bme1390I	CCNGG	1 cut(s)	786
Bme18I	GGWCC	2 cut(s)	264, 296
BmgT120I	GGNCC	2 cut(s)	264, 296
BmiI	GGNNCC	2 cut(s)	379, 534
BmrFI	CCNGG	1 cut(s)	786
BmsI	GCATC	2 cut(s)	132, 169
BmtI	GCTAGC	1 cut(s)	48
BpiI	GAAGAC	2 cut(s)	59, 731
BsaJI	CCNNGG	1 cut(s)	652
Bsc4I	CCNNNNNNNGG	1 cut(s)	215
Bse1I	ACTGG	3 cut(s)	52, 266, 639
BseBI	CCWGG	1 cut(s)	786
BseDI	CCNNGG	1 cut(s)	652
BseGI	GGATG	1 cut(s)	646
BseLI	CCNNNNNNNGG	1 cut(s)	215
BseMII	CTCAG	2 cut(s)	243, 708
BseNI	ACTGG	3 cut(s)	52, 266, 639
BseRI	GAGGAG	1 cut(s)	120
BseSI	GKGCMC	1 cut(s)	535
BseXI	GCAGC	1 cut(s)	755
BshNI	GGYRCC	1 cut(s)	532
BsiHKAI	GWGCWC	1 cut(s)	604
BslFI	GGGAC	1 cut(s)	10
BslI	CCNNNNNNNGG	1 cut(s)	215
BsmAI	GTCTC	1 cut(s)	229
BsmFI	GGGAC	1 cut(s)	10
BsmI	GAATGC	1 cut(s)	33
Bsp1286I	GDGCHC	2 cut(s)	535, 604
Bsp143I	GATC	2 cut(s)	319, 394
BspACI	CCGC	2 cut(s)	279, 335
BspCNI	CTCAG	2 cut(s)	244, 709
BspLI	GGNNCC	2 cut(s)	379, 534
BspMI	ACCTGC	1 cut(s)	614
BspOI	GCTAGC	1 cut(s)	48
BspT107I	GGYRCC	1 cut(s)	532
BsrI	ACTGG	3 cut(s)	52, 266, 639
BssECI	CCNNGG	1 cut(s)	652
BssMI	GATC	2 cut(s)	319, 394
BssT1I	CCWWGG	1 cut(s)	652
Bst2UI	CCWGG	1 cut(s)	786
Bst4CI	ACNGT	2 cut(s)	24, 101
Bst6I	CTCTTC	1 cut(s)	652
BstC8I	GCNNGC	3 cut(s)	46, 174, 463
BstDEI	CTNAG	2 cut(s)	252, 717
BstF5I	GGATG	1 cut(s)	646
BstKTI	GATC	2 cut(s)	322, 397
BstMAI	GTCTC	1 cut(s)	229
BstMBI	GATC	2 cut(s)	319, 394
BstMWI	GCNNNNNNNGC	3 cut(s)	173, 178, 599
BstNI	CCWGG	1 cut(s)	786
BstNSI	RCATGY	1 cut(s)	176
BstSCI	CCNGG	1 cut(s)	784
BstSFI	CTRYAG	1 cut(s)	198
BstSLI	GKGCMC	1 cut(s)	535
BstV1I	GCAGC	1 cut(s)	755
BstV2I	GAAGAC	2 cut(s)	59, 731
BtsCI	GGATG	1 cut(s)	646
BveI	ACCTGC	1 cut(s)	614
Cac8I	GCNNGC	3 cut(s)	46, 174, 463
Cfr13I	GGNCC	2 cut(s)	264, 296
CviAII	CATG	3 cut(s)	173, 440, 571
CviJI	RGCY	8 cut(s)	44, 48, 167, 203, 461, 569, 645, 784
CviKI_1	RGCY	8 cut(s)	44, 48, 167, 203, 461, 569, 645, 784
DdeI	CTNAG	2 cut(s)	252, 717
DpnI	GATC	2 cut(s)	321, 396
DpnII	GATC	2 cut(s)	319, 394
Eam1104I	CTCTTC	1 cut(s)	652
EarI	CTCTTC	1 cut(s)	652
Eco130I	CCWWGG	1 cut(s)	652
Eco47I	GGWCC	2 cut(s)	264, 296
EcoRI	GAATTC	1 cut(s)	4
EcoRII	CCWGG	1 cut(s)	784
EcoT14I	CCWWGG	1 cut(s)	652
ErhI	CCWWGG	1 cut(s)	652
FaeI	CATG	3 cut(s)	176, 443, 574
FaqI	GGGAC	1 cut(s)	10
FatI	CATG	3 cut(s)	172, 439, 570
FauI	CCCGC	1 cut(s)	328
FblI	GTMKAC	1 cut(s)	777
Fnu4HI	GCNGC	1 cut(s)	744
FokI	GGATG	1 cut(s)	633
Fsp4HI	GCNGC	1 cut(s)	744
FspBI	CTAG	2 cut(s)	41, 45
GluI	GCNGC	1 cut(s)	744
Hin1II	CATG	3 cut(s)	176, 443, 574
HincII	GTYRAC	2 cut(s)	765, 778
HindII	GTYRAC	2 cut(s)	765, 778
HinfI	GANTC	4 cut(s)	115, 275, 407, 443
HpaI	GTTAAC	1 cut(s)	765
HphI	GGTGA	1 cut(s)	405
Hpy166II	GTNNAC	2 cut(s)	765, 778
Hpy188I	TCNGA	3 cut(s)	114, 382, 709
Hpy188III	TCNNGA	4 cut(s)	272, 294, 357, 692
Hpy8I	GTNNAC	2 cut(s)	765, 778
Hpy99I	CGWCG	2 cut(s)	245, 782
HpyAV	CCTTC	3 cut(s)	209, 377, 572
HpyCH4III	ACNGT	2 cut(s)	24, 101
HpyCH4IV	ACGT	1 cut(s)	89
HpyCH4V	TGCA	7 cut(s)	33, 123, 172, 420, 608, 629, 743
HpyF10VI	GCNNNNNNNGC	3 cut(s)	173, 178, 599
HpyF3I	CTNAG	2 cut(s)	252, 717
HpySE526I	ACGT	1 cut(s)	89
Hsp92II	CATG	3 cut(s)	176, 443, 574
KspAI	GTTAAC	1 cut(s)	765
Kzo9I	GATC	2 cut(s)	319, 394
LmnI	GCTCC	2 cut(s)	208, 599
Lsp1109I	GCAGC	1 cut(s)	755
LweI	GCATC	2 cut(s)	132, 169
MaeI	CTAG	2 cut(s)	41, 45
MaeII	ACGT	1 cut(s)	89
MaeIII	GTNAC	1 cut(s)	700
MalI	GATC	2 cut(s)	321, 396
MboI	GATC	2 cut(s)	319, 394
MboII	GAAGA	6 cut(s)	59, 359, 402, 669, 733, 736
MfeI	CAATTG	1 cut(s)	372
MhlI	GDGCHC	2 cut(s)	535, 604
MluCI	AATT	4 cut(s)	4, 342, 372, 506
MnlI	CCTC	3 cut(s)	90, 141, 583
MseI	TTAA	5 cut(s)	468, 489, 509, 764, 806
MspA1I	CMGCKG	1 cut(s)	281
MspR9I	CCNGG	1 cut(s)	786
MunI	CAATTG	1 cut(s)	372
Mva1269I	GAATGC	1 cut(s)	33
MvaI	CCWGG	1 cut(s)	786
MwoI	GCNNNNNNNGC	3 cut(s)	173, 178, 599
NdeII	GATC	2 cut(s)	319, 394
NheI	GCTAGC	1 cut(s)	44
NlaIII	CATG	3 cut(s)	176, 443, 574
NlaIV	GGNNCC	2 cut(s)	379, 534
NmeAIII	GCCGAG	1 cut(s)	157
NspI	RCATGY	1 cut(s)	176
PaeI	GCATGC	1 cut(s)	176
PaqCI	CACCTGC	1 cut(s)	614
PcsI	WCGNNNNNNNCGW	1 cut(s)	765
PctI	GAATGC	1 cut(s)	33
PfeI	GAWTC	4 cut(s)	115, 275, 407, 443
PflFI	GACNNNGTC	1 cut(s)	773
PkrI	GCNGC	1 cut(s)	745
PshBI	ATTAAT	1 cut(s)	509
PsiI	TTATAA	2 cut(s)	306, 329
Psp6I	CCWGG	1 cut(s)	784
PspGI	CCWGG	1 cut(s)	784
PspN4I	GGNNCC	2 cut(s)	379, 534
PspPI	GGNCC	2 cut(s)	264, 296
PsyI	GACNNNGTC	1 cut(s)	773
SalI	GTCGAC	1 cut(s)	776
SaqAI	TTAA	5 cut(s)	468, 489, 509, 764, 806
SatI	GCNGC	1 cut(s)	744
Sau3AI	GATC	2 cut(s)	319, 394
Sau96I	GGNCC	2 cut(s)	264, 296
ScrFI	CCNGG	1 cut(s)	786
SduI	GDGCHC	2 cut(s)	535, 604
SfaNI	GCATC	2 cut(s)	132, 169
SfcI	CTRYAG	1 cut(s)	198
SinI	GGWCC	2 cut(s)	264, 296
SphI	GCATGC	1 cut(s)	176
Sse9I	AATT	4 cut(s)	4, 342, 372, 506
SsiI	CCGC	2 cut(s)	279, 335
SspMI	CTAG	2 cut(s)	41, 45
StyD4I	CCNGG	1 cut(s)	784
StyI	CCWWGG	1 cut(s)	652
TaaI	ACNGT	2 cut(s)	24, 101
TaiI	ACGT	1 cut(s)	92
TaqI	TCGA	3 cut(s)	240, 759, 777
TasI	AATT	4 cut(s)	4, 342, 372, 506
TfiI	GAWTC	4 cut(s)	115, 275, 407, 443
Tru1I	TTAA	5 cut(s)	468, 489, 509, 764, 806
Tru9I	TTAA	5 cut(s)	468, 489, 509, 764, 806
TseI	GCWGC	1 cut(s)	743
TspDTI	ATGAA	3 cut(s)	17, 142, 228
Tth111I	GACNNNGTC	1 cut(s)	773
VpaK11BI	GGWCC	2 cut(s)	264, 296
VspI	ATTAAT	1 cut(s)	509
XapI	RAATTY	1 cut(s)	4
XceI	RCATGY	1 cut(s)	176
XmiI	GTMKAC	1 cut(s)	777
XspI	CTAG	2 cut(s)	41, 45

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.