Prupe.7G090500_v2.0.a1

Ring finger domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
12395639 .. 12402056
6418 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G090500.6

Sequence Viewer

Length: 1170 bp
ATGGAGGTTCCAGATATGGAGGCAAAGAAGAGTGAAAGTCATATGATATCAGCTGCAGCATTTGTGGAAGGGGGAATACAAGAGGCTTGTGCTGAGGCCTGCAGCATATGCCTTGAGGAGTTTTGTGAAAGTGATCCTTCAGTGGTGACTACTTGCAAGCATGAGTTTCACCTCCACTGCATCCTTGAATGGTGCCAGAGAAGCTCTCAGTGCCCCATGTGTTGGCAGGCCATTAGCTTGAAGGATTCTTGCAGTCAAGAGTTACTTGAGGCAGTTGAACGGGAGAGGAGCTTTAGGAATACATCAAGAAATGCAACTATATTTCATCATCCCACCCTTGGCGATTTTGAATTTCAGCATTTACCTGGGGGTACTAACAATGCTGAACTTGAAGAGCGTATAATCCAGCACTTGGCAGCTGCTGCTTCCATGGGAAGGGCCCACCACAATGGTAGAAGGGAAGGCCAGAGGAGCCGGTCATCTGCTCGTGGTCATCCACACTTCTCGGTGTTTTCTACTCATCCTAGTGCATCTCCTCTTGGTCCTGTTTCTGCCCCAGGAGGGGACAGTGAACCTGCCGAAATAACTGTAGCAAGTCCGTCTACCCCACTTACATCAGATGGGGATGAATCATCACGAAGGAGTGCACATTTTCCTTCTGTTCAGACTGATGGAATTTCGCCCTCAGCATCTGGGTCTGTACGCATGCACAGAAATCGTCAAGGACTTTCCTCCAGTCACTGGAACTCTACTAGTCAATCCTCTCCATTGAATCAGGACCGAGCAGGACCATCAGACCTTCAGTCCATTTCAGAGTCTCTGAAATCTAAGTTTAATTCCATGTCAATGAGGTACAAGGAGTCGTTTTCGAGGAGTACAAGAGGATGGAAGGAGAGGCTGTTCTCACGTAGCACTTCTATGTCAGAACTCAGTTCTGAAGTTCGTAGAGAGGTCAATGCTGGAATCGCCACTGTATCACGTATGATGGAACGCCTTGAGACCAAAGATATTGGTAGAGCCCCTGAGGCTTCTGTAGCAAATCATACGGCAGATGGTTCTGCTGCAGATCAGAGCAACAACCCAAACAGTTCAGAGATTCATGGAGAAAACCGTTTGAGTGACAACAATAGGCCTGGTACTACTTGTCCCGCAGGTTCTGCTTCAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

390

Amino Acids

42.3

Weight (kDa)

6.06

Isoelectric Point (pI)

63.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 583, 1142
AccB1I GGYRCC 1 cut(s) 192
AccB7I CCANNNNNTGG 3 cut(s) 222, 412, 741
AccI GTMKAC 1 cut(s) 602
AciI CCGC 1 cut(s) 1149
AclWI GGATC 1 cut(s) 128
AcsI RAATTY 2 cut(s) 350, 675
AcuI CTGAAG 3 cut(s) 123, 785, 957
AfaI GTAC 5 cut(s) 373, 702, 854, 877, 1138
AfiI CCNNNNNNNGG 7 cut(s) 222, 338, 412, 435, 561, 562, 741
AgsI TTSAA 7 cut(s) 188, 241, 278, 350, 392, 772, 1164
AhdI GACNNNNNGTC 1 cut(s) 802
AhlI ACTAGT 1 cut(s) 752
AjnI CCWGG 3 cut(s) 364, 556, 1132
AloI GAACNNNNNNTCC 2 cut(s) 884, 916
AluBI AGCT 5 cut(s) 53, 204, 237, 291, 419
AluI AGCT 5 cut(s) 53, 204, 237, 291, 419
Alw21I GWGCWC 1 cut(s) 649
Alw26I GTCTC 2 cut(s) 822, 992
Alw44I GTGCAC 1 cut(s) 645
AlwI GGATC 1 cut(s) 128
AlwNI CAGNNNCTG 4 cut(s) 422, 692, 741, 1157
AoxI GGCC 5 cut(s) 96, 228, 438, 463, 1130
ApaI GGGCCC 1 cut(s) 442
ApaLI GTGCAC 1 cut(s) 645
ApeKI GCWGC 7 cut(s) 53, 56, 102, 416, 419, 422, 1061
ApoI RAATTY 2 cut(s) 350, 675
AspS9I GGNCC 5 cut(s) 438, 439, 542, 778, 788
AsuHPI GGTGA 2 cut(s) 157, 161
AvaII GGWCC 3 cut(s) 542, 778, 788
AxyI CCTNAGG 1 cut(s) 1023
BaeGI GKGCMC 3 cut(s) 215, 442, 649
BanI GGYRCC 1 cut(s) 192
BanII GRGCYC 2 cut(s) 442, 1021
BarI GAAGNNNNNNTAC 2 cut(s) 60, 92
BauI CACGAG 1 cut(s) 486
Bbv12I GWGCWC 1 cut(s) 649
BbvCI CCTCAGC 2 cut(s) 93, 685
BbvI GCAGC 7 cut(s) 40, 68, 114, 406, 409, 428, 1048
BccI CCATC 6 cut(s) 614, 665, 799, 879, 979, 1046
BceAI ACGGC 1 cut(s) 1062
BcgI CGANNNNNNTGC 2 cut(s) 698, 732
BciT130I CCWGG 3 cut(s) 366, 558, 1134
BcoDI GTCTC 2 cut(s) 822, 992
BcuI ACTAGT 1 cut(s) 752
BfaI CTAG 2 cut(s) 525, 753
BfmI CTRYAG 5 cut(s) 54, 100, 588, 1032, 1062
BfuAI ACCTGC 2 cut(s) 583, 1142
BglI GCCNNNNNGGC 1 cut(s) 1025
BisI GCNGC 7 cut(s) 54, 57, 103, 417, 420, 423, 1062
BlsI GCNGC 7 cut(s) 55, 58, 104, 418, 421, 424, 1063
Bme1390I CCNGG 3 cut(s) 366, 558, 1134
Bme18I GGWCC 3 cut(s) 542, 778, 788
BmeRI GACNNNNNGTC 1 cut(s) 802
BmgT120I GGNCC 5 cut(s) 438, 439, 542, 778, 788
BmiI GGNNCC 4 cut(s) 9, 194, 440, 473
BmrFI CCNGG 3 cut(s) 366, 558, 1134
BmsI GCATC 3 cut(s) 189, 539, 698
BplI GAGNNNNNCTC 2 cut(s) 190, 222
BpmI CTGGAG 1 cut(s) 718
Bpu10I CCTNAGC 2 cut(s) 93, 685
BpuEI CTTGAG 3 cut(s) 134, 287, 1016
BsaAI YACGTR 2 cut(s) 908, 980
BsaI GGTCTC 1 cut(s) 992
BsaJI CCNNGG 4 cut(s) 337, 365, 429, 556
BsaXI ACNNNNNCTCC 2 cut(s) 884, 914
Bsc4I CCNNNNNNNGG 7 cut(s) 222, 338, 412, 435, 561, 562, 741
Bse118I RCCGGY 1 cut(s) 474
Bse1I ACTGG 2 cut(s) 735, 746
Bse21I CCTNAGG 1 cut(s) 1023
BseBI CCWGG 3 cut(s) 366, 558, 1134
BseDI CCNNGG 4 cut(s) 337, 365, 429, 556
BseGI GGATG 6 cut(s) 180, 328, 493, 520, 631, 890
BseLI CCNNNNNNNGG 7 cut(s) 222, 338, 412, 435, 561, 562, 741
BseMII CTCAG 5 cut(s) 84, 221, 699, 943, 1014
BseNI ACTGG 2 cut(s) 735, 746
BseRI GAGGAG 5 cut(s) 131, 301, 484, 525, 886
BseSI GKGCMC 3 cut(s) 215, 442, 649
BseXI GCAGC 7 cut(s) 40, 68, 114, 406, 409, 428, 1048
BshFI GGCC 5 cut(s) 98, 230, 440, 465, 1132
BshNI GGYRCC 1 cut(s) 192
BsiHKAI GWGCWC 1 cut(s) 649
BsiSI CCGG 1 cut(s) 475
BslFI GGGAC 2 cut(s) 578, 1131
BslI CCNNNNNNNGG 7 cut(s) 222, 338, 412, 435, 561, 562, 741
BsmAI GTCTC 2 cut(s) 822, 992
BsmFI GGGAC 2 cut(s) 578, 1131
BsnI GGCC 5 cut(s) 98, 230, 440, 465, 1132
Bso31I GGTCTC 1 cut(s) 992
Bsp120I GGGCCC 1 cut(s) 438
Bsp1286I GDGCHC 4 cut(s) 215, 442, 649, 1021
Bsp143I GATC 2 cut(s) 133, 1066
Bsp19I CCATGG 1 cut(s) 429
BspACI CCGC 1 cut(s) 1149
BspANI GGCC 5 cut(s) 98, 230, 440, 465, 1132
BspCNI CTCAG 5 cut(s) 85, 220, 698, 942, 1015
BspLI GGNNCC 4 cut(s) 9, 194, 440, 473
BspMAI CTGCAG 3 cut(s) 58, 104, 1066
BspMI ACCTGC 2 cut(s) 583, 1142
BspPI GGATC 1 cut(s) 128
BspQI GCTCTTC 1 cut(s) 387
BspT107I GGYRCC 1 cut(s) 192
BspTNI GGTCTC 1 cut(s) 992
BsrFI RCCGGY 1 cut(s) 474
BsrI ACTGG 2 cut(s) 735, 746
BssAI RCCGGY 1 cut(s) 474
BssECI CCNNGG 4 cut(s) 337, 365, 429, 556
BssMI GATC 2 cut(s) 133, 1066
BssSI CACGAG 1 cut(s) 486
BssT1I CCWWGG 2 cut(s) 337, 429
Bst2BI CACGAG 1 cut(s) 486
Bst2UI CCWGG 3 cut(s) 366, 558, 1134
Bst4CI ACNGT 5 cut(s) 569, 589, 973, 1088, 1112
Bst6I CTCTTC 2 cut(s) 23, 387
BstAPI GCANNNNNTGC 3 cut(s) 108, 422, 1157
BstBAI YACGTR 2 cut(s) 908, 980
BstC8I GCNNGC 4 cut(s) 100, 158, 228, 707
BstDEI CTNAG 6 cut(s) 93, 207, 685, 828, 929, 1023
BstDSI CCRYGG 1 cut(s) 429
BstF5I GGATG 6 cut(s) 180, 328, 493, 520, 631, 890
BstKTI GATC 2 cut(s) 136, 1069
BstMAI GTCTC 2 cut(s) 822, 992
BstMBI GATC 2 cut(s) 133, 1066
BstMWI GCNNNNNNNGC 9 cut(s) 108, 201, 210, 422, 471, 965, 1025, 1034, 1157
BstNI CCWGG 3 cut(s) 366, 558, 1134
BstNSI RCATGY 1 cut(s) 709
BstSCI CCNGG 3 cut(s) 364, 556, 1132
BstSFI CTRYAG 5 cut(s) 54, 100, 588, 1032, 1062
BstSLI GKGCMC 3 cut(s) 215, 442, 649
BstV1I GCAGC 7 cut(s) 40, 68, 114, 406, 409, 428, 1048
BstXI CCANNNNNNTGG 1 cut(s) 449
Bsu36I CCTNAGG 1 cut(s) 1023
BsuRI GGCC 5 cut(s) 98, 230, 440, 465, 1132
BtgI CCRYGG 1 cut(s) 429
BtsCI GGATG 6 cut(s) 180, 328, 493, 520, 631, 890
BtsI GCAGTG 1 cut(s) 175
BtsIMutI CAGTG 6 cut(s) 147, 175, 215, 574, 739, 969
BveI ACCTGC 2 cut(s) 583, 1142
Cac8I GCNNGC 4 cut(s) 100, 158, 228, 707
CaiI CAGNNNCTG 4 cut(s) 422, 692, 741, 1157
Cfr10I RCCGGY 1 cut(s) 474
Cfr13I GGNCC 5 cut(s) 438, 439, 542, 778, 788
Csp6I GTAC 5 cut(s) 372, 701, 853, 876, 1137
CviAII CATG 6 cut(s) 161, 217, 430, 706, 841, 1100
CviQI GTAC 5 cut(s) 372, 701, 853, 876, 1137
DdeI CTNAG 6 cut(s) 93, 207, 685, 828, 929, 1023
DpnI GATC 2 cut(s) 135, 1068
DpnII GATC 2 cut(s) 133, 1066
DriI GACNNNNNGTC 1 cut(s) 802
Eam1104I CTCTTC 2 cut(s) 23, 387
Eam1105I GACNNNNNGTC 1 cut(s) 802
EarI CTCTTC 2 cut(s) 23, 387
Eco130I CCWWGG 2 cut(s) 337, 429
Eco147I AGGCCT 2 cut(s) 98, 1132
Eco24I GRGCYC 2 cut(s) 442, 1021
Eco31I GGTCTC 1 cut(s) 992
Eco32I GATATC 1 cut(s) 48
Eco47I GGWCC 3 cut(s) 542, 778, 788
Eco57I CTGAAG 3 cut(s) 123, 785, 957
Eco81I CCTNAGG 1 cut(s) 1023
EcoO109I RGGNCCY 1 cut(s) 438
EcoRII CCWGG 3 cut(s) 364, 556, 1132
EcoRV GATATC 1 cut(s) 48
EcoT14I CCWWGG 2 cut(s) 337, 429
EcoT38I GRGCYC 2 cut(s) 442, 1021
ErhI CCWWGG 2 cut(s) 337, 429
FaeI CATG 6 cut(s) 164, 220, 433, 709, 844, 1103
FalI AAGNNNNNCTT 4 cut(s) 121, 153, 249, 281
FaqI GGGAC 2 cut(s) 578, 1131
FatI CATG 6 cut(s) 160, 216, 429, 705, 840, 1099
FauI CCCGC 1 cut(s) 1156
FauNDI CATATG 2 cut(s) 42, 107
FblI GTMKAC 1 cut(s) 602
Fnu4HI GCNGC 7 cut(s) 54, 57, 103, 417, 420, 423, 1062
FokI GGATG 6 cut(s) 167, 315, 480, 507, 638, 897
FriOI GRGCYC 2 cut(s) 442, 1021
Fsp4HI GCNGC 7 cut(s) 54, 57, 103, 417, 420, 423, 1062
FspBI CTAG 2 cut(s) 525, 753
GluI GCNGC 7 cut(s) 54, 57, 103, 417, 420, 423, 1062
GsuI CTGGAG 1 cut(s) 718
HaeIII GGCC 5 cut(s) 98, 230, 440, 465, 1132
HapII CCGG 1 cut(s) 475
Hin1II CATG 6 cut(s) 164, 220, 433, 709, 844, 1103
HinfI GANTC 7 cut(s) 245, 629, 772, 815, 860, 963, 1096
HpaII CCGG 1 cut(s) 475
HphI GGTGA 2 cut(s) 157, 161
Hpy166II GTNNAC 3 cut(s) 572, 603, 647
Hpy188I TCNGA 9 cut(s) 619, 666, 796, 814, 822, 925, 937, 1071, 1093
Hpy188III TCNNGA 5 cut(s) 11, 257, 306, 636, 776
Hpy8I GTNNAC 3 cut(s) 572, 603, 647
HpyCH4III ACNGT 5 cut(s) 569, 589, 973, 1088, 1112
HpyCH4IV ACGT 2 cut(s) 907, 979
HpyF10VI GCNNNNNNNGC 9 cut(s) 108, 201, 210, 422, 471, 965, 1025, 1034, 1157
HpyF3I CTNAG 6 cut(s) 93, 207, 685, 828, 929, 1023
HpySE526I ACGT 2 cut(s) 907, 979
Hsp92II CATG 6 cut(s) 164, 220, 433, 709, 844, 1103
Kzo9I GATC 2 cut(s) 133, 1066
LguI GCTCTTC 1 cut(s) 387
LmnI GCTCC 2 cut(s) 288, 471
Lsp1109I GCAGC 7 cut(s) 40, 68, 114, 406, 409, 428, 1048
LweI GCATC 3 cut(s) 189, 539, 698
MaeI CTAG 2 cut(s) 525, 753
MaeII ACGT 2 cut(s) 907, 979
MaeIII GTNAC 4 cut(s) 145, 261, 737, 1118
MalI GATC 2 cut(s) 135, 1068
MboI GATC 2 cut(s) 133, 1066
MboII GAAGA 2 cut(s) 40, 404
MhlI GDGCHC 4 cut(s) 215, 442, 649, 1021
MluCI AATT 4 cut(s) 350, 675, 835, 1165
MlyI GAGTC 2 cut(s) 824, 869
MseI TTAA 1 cut(s) 834
MslI CAYNNNNRTG 4 cut(s) 447, 525, 845, 917
MspA1I CMGCKG 2 cut(s) 53, 419
MspI CCGG 1 cut(s) 475
MspR9I CCNGG 3 cut(s) 366, 558, 1134
MvaI CCWGG 3 cut(s) 366, 558, 1134
MwoI GCNNNNNNNGC 9 cut(s) 108, 201, 210, 422, 471, 965, 1025, 1034, 1157
NcoI CCATGG 1 cut(s) 429
NdeI CATATG 2 cut(s) 42, 107
NdeII GATC 2 cut(s) 133, 1066
NlaIII CATG 6 cut(s) 164, 220, 433, 709, 844, 1103
NlaIV GGNNCC 4 cut(s) 9, 194, 440, 473
NmuCI GTSAC 3 cut(s) 145, 737, 1118
NspI RCATGY 1 cut(s) 709
PaeI GCATGC 1 cut(s) 709
PceI AGGCCT 2 cut(s) 98, 1132
PciSI GCTCTTC 1 cut(s) 387
PfeI GAWTC 5 cut(s) 245, 629, 772, 963, 1096
PflMI CCANNNNNTGG 3 cut(s) 222, 412, 741
PkrI GCNGC 7 cut(s) 55, 58, 104, 418, 421, 424, 1063
PleI GAGTC 2 cut(s) 823, 868
PpsI GAGTC 2 cut(s) 823, 868
Ppu21I YACGTR 2 cut(s) 908, 980
Psp6I CCWGG 3 cut(s) 364, 556, 1132
PspGI CCWGG 3 cut(s) 364, 556, 1132
PspN4I GGNNCC 4 cut(s) 9, 194, 440, 473
PspOMI GGGCCC 1 cut(s) 438
PspPI GGNCC 5 cut(s) 438, 439, 542, 778, 788
PstI CTGCAG 3 cut(s) 58, 104, 1066
PstNI CAGNNNCTG 4 cut(s) 422, 692, 741, 1157
PvuII CAGCTG 2 cut(s) 53, 419
RsaI GTAC 5 cut(s) 373, 702, 854, 877, 1138
RsaNI GTAC 5 cut(s) 372, 701, 853, 876, 1137
RseI CAYNNNNRTG 4 cut(s) 447, 525, 845, 917
SapI GCTCTTC 1 cut(s) 387
SaqAI TTAA 1 cut(s) 834
SatI GCNGC 7 cut(s) 54, 57, 103, 417, 420, 423, 1062
Sau3AI GATC 2 cut(s) 133, 1066
Sau96I GGNCC 5 cut(s) 438, 439, 542, 778, 788
SchI GAGTC 2 cut(s) 824, 869
ScrFI CCNGG 3 cut(s) 366, 558, 1134
SduI GDGCHC 4 cut(s) 215, 442, 649, 1021
SfaNI GCATC 3 cut(s) 189, 539, 698
SfcI CTRYAG 5 cut(s) 54, 100, 588, 1032, 1062
SinI GGWCC 3 cut(s) 542, 778, 788
SmiMI CAYNNNNRTG 4 cut(s) 447, 525, 845, 917
SmlI CTYRAG 3 cut(s) 113, 266, 995
SmoI CTYRAG 3 cut(s) 113, 266, 995
SpeI ACTAGT 1 cut(s) 752
SphI GCATGC 1 cut(s) 709
Sse9I AATT 4 cut(s) 350, 675, 835, 1165
SseBI AGGCCT 2 cut(s) 98, 1132
SsiI CCGC 1 cut(s) 1149
SspMI CTAG 2 cut(s) 525, 753
StuI AGGCCT 2 cut(s) 98, 1132
StyD4I CCNGG 3 cut(s) 364, 556, 1132
StyI CCWWGG 2 cut(s) 337, 429
TaaI ACNGT 5 cut(s) 569, 589, 973, 1088, 1112
TaiI ACGT 2 cut(s) 910, 982
TaqI TCGA 1 cut(s) 869
TaqII GACCGA 1 cut(s) 795
TasI AATT 4 cut(s) 350, 675, 835, 1165
TatI WGTACW 1 cut(s) 875
TfiI GAWTC 5 cut(s) 245, 629, 772, 963, 1096
Tru1I TTAA 1 cut(s) 834
Tru9I TTAA 1 cut(s) 834
TscAI CASTG 6 cut(s) 147, 182, 215, 574, 746, 976
TseFI GTSAC 3 cut(s) 145, 737, 1118
TseI GCWGC 7 cut(s) 53, 56, 102, 416, 419, 422, 1061
Tsp45I GTSAC 3 cut(s) 145, 737, 1118
TspDTI ATGAA 3 cut(s) 314, 642, 1088
TspGWI ACGGA 1 cut(s) 588
TspRI CASTG 6 cut(s) 147, 182, 215, 574, 746, 976
Van91I CCANNNNNTGG 3 cut(s) 222, 412, 741
VneI GTGCAC 1 cut(s) 645
VpaK11BI GGWCC 3 cut(s) 542, 778, 788
XapI RAATTY 2 cut(s) 350, 675
XceI RCATGY 1 cut(s) 709
XmiI GTMKAC 1 cut(s) 602
XspI CTAG 2 cut(s) 525, 753
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.