Rorug03G0159200

Ring finger domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0004240
Physical Location & Seq
Reverse (-)
13195025 .. 13199847
4823 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0159200.1

Sequence Viewer

Length: 1887 bp
ATGTACCCAATCCTCACCTTCCTCTTCTTCTTTTTCTTTTTCTTCTTCTTTTCCGTCCATGCAGTTGAAAATCTCTCCAACTGCAGCCAAACATTCAACTGTGGCTCTCTACATAATCTCTCCTACCCATTTACAGGCGGCGCCCGCCCGGCTCACTGCGGCCCGCCCGAGTTCCATATCAGATGCGTCAATGACGTGCCCGAGCTGACCATCATGTCGCTGAGTTACCGAGTCCTATCACTCGACTCACTTGGTCAAACTCTGAGCTTGGCCCGCAATGACCTCTGGAACGAGACCTGCACAAGTGACTTAGCTAACTCAAGTCTTGCTTCCGGTTTCTTCAACTTCAGCGACGCCGATAACGTCGACGTCACCATTTTCTACGGTTGCAATTCCTCGAGTATTGTGCCCACGCCCGAGAATTGGTTTCGCTGTTATAACAATCAGACTTTTGACGATGCTTATTACCTGATTGGTCCGGTTCCCAATGATCCAATCATGAATACTTTTAGGTGCAGTCATGTTATTACGGTACCGATTCTCAAAATCACAGCGGCTAAGCTCGTGGCTGAACGGTCGCTGTTTAAGCAAGCTATTATGGGTGGATTCCATGTCAACTTTACCGATCCGTACGCTGATCACTGCGCCAAGTGCTCCGCTGTAAATAGGCAGTGTGGGTTTGACTCCTATTCGAACCGACCCATTTGCATTTGCGGCAATCGGCTGTGTGGCCTAGGTTCAAATTCATTATCACGAAAATGGATCATAGTTATAGGCATTTTGGCGGGTGTCTCTGGGGCCATCTTGATCATCGTTTGTGGTATACACATGTCAAGGAAAAGAATGATGATTTTCAAGAAACAAGAAACGAATGAGCTAGACTTTGAGGACTTTATAAAGAATTATGGATCGATTGCCCCAAAGCGTTATAGTTTTTCAAATGTGCAGAAAATGACAAACTCATTCCGAGATCAAATTGGGAAAGGAGGATATGGCACTGTCTACAAAGGAGAGTTGCCTGATGGCCTTCTTGTGGCCGTGAAAGTACTAACCAAATCAAAAGGTAATGGAGAAGAATTTATTAATGAAGTTGCTAGCATTGGTAGAACTTCCCATGTCAATGTAGTCACTCTTTTGGGATTCTGTTATGAAAGGGGTAAAAGTGCTCTGATTTATGAATACATGCCTAATGGATCTCTAGACAAATTCATACATAAGCCAGGATCTTCTAACGAAAGCTGTCGACTAGATTGGAAAACATTATATAATATTGCAGTTGGCATTGCTCGAGGACTAGAATACTTGCACCGCGGTTGTAACACAAGAATTTTGCATTTTGACATAAAGCCACAGAATATTCTTTTGGACAAGGATTTCTGCCCAAAAATCTCTGATTTCGGACTAGCCAAATCATGCATTACGAAGGAGAGTATCGTTTCACTGCTTGGCACAAGAGGAACAGCAGGATACATTGCACCAGAAGTATTTAGTCGGAACTTTGGCGGAGTATCTCATAAATCAGATGTCTACAGTTATGGGATGTTGGTTCTTGAAATGGTTGGGGCAAGAAAGAATTTGGATTCTGGAGTGTCTCATACAAGTGAAATGTTTCCACATTACATTTACAAAGATCTAGAGCTAGACAACGATGCAAACAATTTCGGGGCTATATCAGAGGAGGAAAAAGATACGGCAAGAAAGATGGTTTTAGTAAGTCTTGGGTGCATTCAGACTCTTCCACCTGATCGGCCATCAATGAGCAAAGTGGTAGAGATGCTTGAAGGACCCCTACATTCGTTGATGATTCCACCACAGCCTTCCTTGATACCTCCTACAAGATTTTCAGGAGAATCTGTGACTTCATCCCAACCATCTGAAACAGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2

Protein Analysis

628

Amino Acids

69.65

Weight (kDa)

6.94

Isoelectric Point (pI)

33.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 28 - 92 2.2e-12 Wall-associated receptor kinase galacturonan-binding
WAK_assoc PF14380 169 - 240 1.3e-10 Wall-associated receptor kinase C-terminal
PK_Tyr_Ser-Thr PF07714 322 - 593 1.8e-43 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 324 - 591 5.2e-43 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 438, 896
AasI GACNNNNNNGTC 1 cut(s) 214
AatII GACGTC 1 cut(s) 372
Acc36I ACCTGC 1 cut(s) 305
Acc65I GGTACC 1 cut(s) 532
AccB1I GGYRCC 2 cut(s) 140, 532
AccI GTMKAC 5 cut(s) 366, 823, 1002, 1243, 1527
AccII CGCG 1 cut(s) 1311
AclWI GGATC 6 cut(s) 485, 620, 770, 916, 1201, 1231
AcoI YGGCCR 2 cut(s) 1035, 1748
AcsI RAATTY 5 cut(s) 742, 1076, 1205, 1326, 1573
AcuI CTGAAG 1 cut(s) 331
AcyI GRCGYC 3 cut(s) 141, 354, 369
AfaI GTAC 4 cut(s) 5, 534, 632, 1047
AfiI CCNNNNNNNGG 3 cut(s) 134, 423, 1033
AflIII ACRYGT 1 cut(s) 828
AgsI TTSAA 8 cut(s) 68, 97, 343, 741, 856, 939, 1553, 1781
AjiI CACGTC 1 cut(s) 196
AjnI CCWGG 1 cut(s) 1219
AjuI GAANNNNNNNTTGG 2 cut(s) 1346, 1378
AluBI AGCT 8 cut(s) 205, 267, 314, 562, 593, 877, 1239, 1639
AluI AGCT 8 cut(s) 205, 267, 314, 562, 593, 877, 1239, 1639
Alw21I GWGCWC 2 cut(s) 656, 1168
Alw26I GTCTC 3 cut(s) 287, 796, 1596
AlwI GGATC 6 cut(s) 485, 620, 770, 916, 1201, 1231
Ama87I CYCGRG 5 cut(s) 167, 200, 397, 416, 1287
AoxI GGCC 7 cut(s) 160, 270, 730, 798, 1024, 1035, 1748
ApeKI GCWGC 1 cut(s) 84
ApoI RAATTY 5 cut(s) 742, 1076, 1205, 1326, 1573
AseI ATTAAT 1 cut(s) 1083
Asp700I GAANNNNTTC 1 cut(s) 1608
Asp718I GGTACC 1 cut(s) 532
AspA2I CCTAGG 1 cut(s) 733
AspLEI GCGC 2 cut(s) 143, 647
AspS9I GGNCC 5 cut(s) 161, 271, 476, 798, 1784
AsuC2I CCSGG 1 cut(s) 149
AsuHPI GGTGA 2 cut(s) 7, 364
AsuII TTCGAA 1 cut(s) 692
AsuNHI GCTAGC 1 cut(s) 1094
AvaI CYCGRG 5 cut(s) 167, 200, 397, 416, 1287
AvaII GGWCC 2 cut(s) 476, 1784
AvrII CCTAGG 1 cut(s) 733
BaeGI GKGCMC 2 cut(s) 201, 411
BanI GGYRCC 2 cut(s) 140, 532
BarI GAAGNNNNNNTAC 2 cut(s) 1773, 1805
BauI CACGAG 1 cut(s) 563
Bbv12I GWGCWC 2 cut(s) 656, 1168
BbvI GCAGC 1 cut(s) 96
BccI CCATC 6 cut(s) 218, 809, 1016, 1696, 1759, 1879
BceAI ACGGC 2 cut(s) 1022, 1707
BcgI CGANNNNNNTGC 4 cut(s) 388, 422, 687, 721
BciT130I CCWGG 1 cut(s) 1221
BciVI GTATCC 1 cut(s) 1460
BclI TGATCA 2 cut(s) 637, 807
BcnI CCSGG 1 cut(s) 149
BcoDI GTCTC 3 cut(s) 287, 796, 1596
BfaI CTAG 9 cut(s) 734, 878, 1095, 1199, 1247, 1295, 1403, 1634, 1640
BfmI CTRYAG 2 cut(s) 82, 1528
BfoI RGCGCY 1 cut(s) 144
BfuAI ACCTGC 1 cut(s) 305
BfuI GTATCC 1 cut(s) 1460
BglI GCCNNNNNGGC 1 cut(s) 149
BglII AGATCT 1 cut(s) 1630
BisI GCNGC 5 cut(s) 85, 139, 160, 555, 715
BlnI CCTAGG 1 cut(s) 733
BlpI GCTNAGC 1 cut(s) 558
BlsI GCNGC 5 cut(s) 86, 140, 161, 556, 716
BmcAI AGTACT 1 cut(s) 1047
Bme1390I CCNGG 2 cut(s) 149, 1221
Bme18I GGWCC 2 cut(s) 476, 1784
BmeT110I CYCGRG 5 cut(s) 167, 200, 397, 416, 1287
BmgBI CACGTC 1 cut(s) 196
BmgT120I GGNCC 5 cut(s) 161, 271, 476, 798, 1784
BmiI GGNNCC 5 cut(s) 142, 483, 534, 799, 1786
BmrFI CCNGG 2 cut(s) 149, 1221
BmsI GCATC 4 cut(s) 173, 448, 1639, 1764
BmtI GCTAGC 1 cut(s) 1098
BpmI CTGGAG 1 cut(s) 1605
Bpu1102I GCTNAGC 1 cut(s) 558
Bpu14I TTCGAA 1 cut(s) 692
BpuEI CTTGAG 1 cut(s) 304
BpuMI CCSGG 1 cut(s) 149
Bsa29I ATCGAT 1 cut(s) 911
BsaHI GRCGYC 3 cut(s) 141, 354, 369
BsaI GGTCTC 1 cut(s) 287
BsaJI CCNNGG 2 cut(s) 733, 1309
BsaWI WCCGGW 2 cut(s) 332, 478
BsaXI ACNNNNNCTCC 2 cut(s) 1839, 1869
Bsc4I CCNNNNNNNGG 3 cut(s) 134, 423, 1033
Bse3DI GCAATG 3 cut(s) 283, 1281, 1470
BseBI CCWGG 1 cut(s) 1221
BseCI ATCGAT 1 cut(s) 911
BseDI CCNNGG 2 cut(s) 733, 1309
BseGI GGATG 2 cut(s) 1545, 1862
BseLI CCNNNNNNNGG 3 cut(s) 134, 423, 1033
BseMI GCAATG 3 cut(s) 283, 1281, 1470
BseMII CTCAG 2 cut(s) 212, 254
BseRI GAGGAG 1 cut(s) 1691
BseSI GKGCMC 2 cut(s) 201, 411
BseXI GCAGC 1 cut(s) 96
BsgI GTGCAG 3 cut(s) 283, 535, 965
Bsh1236I CGCG 1 cut(s) 1311
Bsh1285I CGRYCG 1 cut(s) 578
BshFI GGCC 7 cut(s) 162, 272, 732, 800, 1026, 1037, 1750
BshNI GGYRCC 2 cut(s) 140, 532
BshVI ATCGAT 1 cut(s) 911
BsiEI CGRYCG 1 cut(s) 578
BsiHKAI GWGCWC 2 cut(s) 656, 1168
BsiHKCI CYCGRG 5 cut(s) 167, 200, 397, 416, 1287
BsiSI CCGG 3 cut(s) 149, 333, 479
BsiWI CGTACG 1 cut(s) 630
BslI CCNNNNNNNGG 3 cut(s) 134, 423, 1033
BsmAI GTCTC 3 cut(s) 287, 796, 1596
BsmI GAATGC 1 cut(s) 1725
BsnI GGCC 7 cut(s) 162, 272, 732, 800, 1026, 1037, 1750
Bso31I GGTCTC 1 cut(s) 287
BsoBI CYCGRG 5 cut(s) 167, 200, 397, 416, 1287
Bsp119I TTCGAA 1 cut(s) 692
Bsp1286I GDGCHC 4 cut(s) 201, 411, 656, 1168
Bsp1720I GCTNAGC 1 cut(s) 558
BspANI GGCC 7 cut(s) 162, 272, 732, 800, 1026, 1037, 1750
BspCNI CTCAG 2 cut(s) 213, 255
BspDI ATCGAT 1 cut(s) 911
BspFNI CGCG 1 cut(s) 1311
BspHI TCATGA 1 cut(s) 498
BspLI GGNNCC 5 cut(s) 142, 483, 534, 799, 1786
BspMAI CTGCAG 1 cut(s) 86
BspMI ACCTGC 1 cut(s) 305
BspOI GCTAGC 1 cut(s) 1098
BspPI GGATC 6 cut(s) 485, 620, 770, 916, 1201, 1231
BspT104I TTCGAA 1 cut(s) 692
BspT107I GGYRCC 2 cut(s) 140, 532
BspTNI GGTCTC 1 cut(s) 287
BsrDI GCAATG 3 cut(s) 283, 1281, 1470
BssECI CCNNGG 2 cut(s) 733, 1309
BssNAI GTATAC 1 cut(s) 824
BssNI GRCGYC 3 cut(s) 141, 354, 369
BssSI CACGAG 1 cut(s) 563
BssT1I CCWWGG 1 cut(s) 733
Bst1107I GTATAC 1 cut(s) 824
Bst2BI CACGAG 1 cut(s) 563
Bst2UI CCWGG 1 cut(s) 1221
Bst4CI ACNGT 6 cut(s) 101, 386, 532, 576, 1000, 1532
Bst6I CTCTTC 2 cut(s) 29, 1740
BstACI GRCGYC 3 cut(s) 141, 354, 369
BstBI TTCGAA 1 cut(s) 692
BstC8I GCNNGC 5 cut(s) 145, 164, 274, 591, 1096
BstDEI CTNAG 4 cut(s) 221, 263, 310, 558
BstDSI CCRYGG 1 cut(s) 1309
BstF5I GGATG 2 cut(s) 1545, 1862
BstFNI CGCG 1 cut(s) 1311
BstH2I RGCGCY 1 cut(s) 144
BstHHI GCGC 2 cut(s) 143, 647
BstMAI GTCTC 3 cut(s) 287, 796, 1596
BstMCI CGRYCG 1 cut(s) 578
BstMWI GCNNNNNNNGC 6 cut(s) 144, 149, 273, 586, 651, 714
BstNI CCWGG 1 cut(s) 1221
BstNSI RCATGY 2 cut(s) 832, 1186
BstSCI CCNGG 2 cut(s) 147, 1219
BstSFI CTRYAG 2 cut(s) 82, 1528
BstSLI GKGCMC 2 cut(s) 201, 411
BstUI CGCG 1 cut(s) 1311
BstV1I GCAGC 1 cut(s) 96
BstX2I RGATCY 3 cut(s) 1193, 1223, 1630
BstYI RGATCY 3 cut(s) 1193, 1223, 1630
BstZ17I GTATAC 1 cut(s) 824
Bsu15I ATCGAT 1 cut(s) 911
BsuI GTATCC 1 cut(s) 1460
BsuRI GGCC 7 cut(s) 162, 272, 732, 800, 1026, 1037, 1750
BsuTUI ATCGAT 1 cut(s) 911
BtgI CCRYGG 1 cut(s) 1309
BtrI CACGTC 1 cut(s) 196
BtsCI GGATG 2 cut(s) 1545, 1862
BtsI GCAGTG 4 cut(s) 154, 640, 677, 1439
BtsIMutI CAGTG 5 cut(s) 154, 640, 677, 996, 1439
BveI ACCTGC 1 cut(s) 305
Cac8I GCNNGC 5 cut(s) 145, 164, 274, 591, 1096
CciI TCATGA 1 cut(s) 498
CfoI GCGC 2 cut(s) 143, 647
Cfr13I GGNCC 5 cut(s) 161, 271, 476, 798, 1784
Cfr42I CCGCGG 1 cut(s) 1312
ClaI ATCGAT 1 cut(s) 911
CseI GACGC 2 cut(s) 175, 362
Csp6I GTAC 4 cut(s) 4, 533, 631, 1046
CviAII CATG 9 cut(s) 59, 214, 499, 521, 611, 829, 1115, 1183, 1413
CviQI GTAC 4 cut(s) 4, 533, 631, 1046
DdeI CTNAG 4 cut(s) 221, 263, 310, 558
DinI GGCGCC 1 cut(s) 142
DrdI GACNNNNNNGTC 1 cut(s) 214
DseDI GACNNNNNNGTC 1 cut(s) 214
EaeI YGGCCR 2 cut(s) 1035, 1748
Eam1104I CTCTTC 2 cut(s) 29, 1740
EarI CTCTTC 2 cut(s) 29, 1740
EciI GGCGGA 1 cut(s) 1518
Eco130I CCWWGG 1 cut(s) 733
Eco31I GGTCTC 1 cut(s) 287
Eco47I GGWCC 2 cut(s) 476, 1784
Eco57I CTGAAG 1 cut(s) 331
Eco88I CYCGRG 5 cut(s) 167, 200, 397, 416, 1287
EcoO109I RGGNCCY 1 cut(s) 1784
EcoRII CCWGG 1 cut(s) 1219
EcoT14I CCWWGG 1 cut(s) 733
EcoT22I ATGCAT 1 cut(s) 1418
EgeI GGCGCC 1 cut(s) 142
EheI GGCGCC 1 cut(s) 142
ErhI CCWWGG 1 cut(s) 733
FaeI CATG 9 cut(s) 62, 217, 502, 524, 614, 832, 1118, 1186, 1416
FalI AAGNNNNNCTT 2 cut(s) 313, 345
FatI CATG 9 cut(s) 58, 213, 498, 520, 610, 828, 1114, 1182, 1412
FauI CCCGC 4 cut(s) 152, 171, 281, 778
FbaI TGATCA 2 cut(s) 637, 807
FblI GTMKAC 5 cut(s) 366, 823, 1002, 1243, 1527
Fnu4HI GCNGC 5 cut(s) 85, 139, 160, 555, 715
FokI GGATG 2 cut(s) 1552, 1849
Fsp4HI GCNGC 5 cut(s) 85, 139, 160, 555, 715
FspBI CTAG 9 cut(s) 734, 878, 1095, 1199, 1247, 1295, 1403, 1634, 1640
GlaI GCGC 2 cut(s) 142, 646
GluI GCNGC 5 cut(s) 85, 139, 160, 555, 715
GsuI CTGGAG 1 cut(s) 1605
HaeII RGCGCY 1 cut(s) 144
HaeIII GGCC 7 cut(s) 162, 272, 732, 800, 1026, 1037, 1750
HapII CCGG 3 cut(s) 149, 333, 479
HgaI GACGC 2 cut(s) 175, 362
HhaI GCGC 2 cut(s) 143, 647
Hin1I GRCGYC 3 cut(s) 141, 354, 369
Hin1II CATG 9 cut(s) 62, 217, 502, 524, 614, 832, 1118, 1186, 1416
Hin6I GCGC 2 cut(s) 141, 645
HinP1I GCGC 2 cut(s) 141, 645
HincII GTYRAC 3 cut(s) 367, 616, 1244
HindII GTYRAC 3 cut(s) 367, 616, 1244
HpaII CCGG 3 cut(s) 149, 333, 479
HphI GGTGA 2 cut(s) 7, 364
Hpy166II GTNNAC 6 cut(s) 367, 616, 824, 1003, 1244, 1528
Hpy8I GTNNAC 6 cut(s) 367, 616, 824, 1003, 1244, 1528
Hpy99I CGWCG 3 cut(s) 356, 368, 371
HpyAV CCTTC 5 cut(s) 28, 1037, 1417, 1775, 1827
HpyCH4III ACNGT 6 cut(s) 101, 386, 532, 576, 1000, 1532
HpyCH4IV ACGT 3 cut(s) 195, 363, 369
HpyF10VI GCNNNNNNNGC 6 cut(s) 144, 149, 273, 586, 651, 714
HpyF3I CTNAG 4 cut(s) 221, 263, 310, 558
HpySE526I ACGT 3 cut(s) 195, 363, 369
Hsp92I GRCGYC 3 cut(s) 141, 354, 369
Hsp92II CATG 9 cut(s) 62, 217, 502, 524, 614, 832, 1118, 1186, 1416
HspAI GCGC 2 cut(s) 141, 645
KasI GGCGCC 1 cut(s) 140
KpnI GGTACC 1 cut(s) 536
Ksp22I TGATCA 2 cut(s) 637, 807
KspI CCGCGG 1 cut(s) 1312
LmnI GCTCC 1 cut(s) 659
Lsp1109I GCAGC 1 cut(s) 96
LweI GCATC 4 cut(s) 173, 448, 1639, 1764
MaeI CTAG 9 cut(s) 734, 878, 1095, 1199, 1247, 1295, 1403, 1634, 1640
MaeII ACGT 3 cut(s) 195, 363, 369
MaeIII GTNAC 6 cut(s) 224, 305, 370, 1126, 1316, 1855
MboII GAAGA 8 cut(s) 16, 19, 34, 37, 331, 1085, 1218, 1727
MflI RGATCY 3 cut(s) 1193, 1223, 1630
MhlI GDGCHC 4 cut(s) 201, 411, 656, 1168
Mly113I GGCGCC 1 cut(s) 141
MlyI GAGTC 4 cut(s) 239, 240, 677, 1726
MmeI TCCRAC 2 cut(s) 102, 1472
Mph1103I ATGCAT 1 cut(s) 1418
MroXI GAANNNNTTC 1 cut(s) 1608
MseI TTAA 2 cut(s) 585, 1083
MslI CAYNNNNRTG 3 cut(s) 757, 1119, 1599
MspA1I CMGCKG 3 cut(s) 554, 659, 1311
MspI CCGG 3 cut(s) 149, 333, 479
MspR9I CCNGG 2 cut(s) 149, 1221
Mva1269I GAATGC 1 cut(s) 1725
MvaI CCWGG 1 cut(s) 1221
MvnI CGCG 1 cut(s) 1311
MwoI GCNNNNNNNGC 6 cut(s) 144, 149, 273, 586, 651, 714
NarI GGCGCC 1 cut(s) 141
NciI CCSGG 1 cut(s) 149
NheI GCTAGC 1 cut(s) 1094
NlaIII CATG 9 cut(s) 62, 217, 502, 524, 614, 832, 1118, 1186, 1416
NlaIV GGNNCC 5 cut(s) 142, 483, 534, 799, 1786
NmuCI GTSAC 4 cut(s) 305, 370, 1126, 1855
NsiI ATGCAT 1 cut(s) 1418
NspI RCATGY 2 cut(s) 832, 1186
NspV TTCGAA 1 cut(s) 692
PaeR7I CTCGAG 2 cut(s) 397, 1287
PagI TCATGA 1 cut(s) 498
PciI ACATGT 1 cut(s) 828
PcsI WCGNNNNNNNCGW 1 cut(s) 360
PctI GAATGC 1 cut(s) 1725
PdmI GAANNNNTTC 1 cut(s) 1608
PfeI GAWTC 6 cut(s) 538, 606, 1140, 1580, 1804, 1850
Pfl23II CGTACG 1 cut(s) 630
PkrI GCNGC 5 cut(s) 86, 140, 161, 556, 716
PleI GAGTC 4 cut(s) 239, 239, 677, 1726
PluTI GGCGCC 1 cut(s) 144
PpsI GAGTC 4 cut(s) 239, 239, 677, 1726
PpuMI RGGWCCY 1 cut(s) 1784
PscI ACATGT 1 cut(s) 828
PshBI ATTAAT 1 cut(s) 1083
PsiI TTATAA 2 cut(s) 438, 896
Psp5II RGGWCCY 1 cut(s) 1784
Psp6I CCWGG 1 cut(s) 1219
PspGI CCWGG 1 cut(s) 1219
PspLI CGTACG 1 cut(s) 630
PspN4I GGNNCC 5 cut(s) 142, 483, 534, 799, 1786
PspPI GGNCC 5 cut(s) 161, 271, 476, 798, 1784
PspPPI RGGWCCY 1 cut(s) 1784
PspXI VCTCGAGB 2 cut(s) 397, 1287
PstI CTGCAG 1 cut(s) 86
PsuI RGATCY 3 cut(s) 1193, 1223, 1630
RsaI GTAC 4 cut(s) 5, 534, 632, 1047
RsaNI GTAC 4 cut(s) 4, 533, 631, 1046
RseI CAYNNNNRTG 3 cut(s) 757, 1119, 1599
SacII CCGCGG 1 cut(s) 1312
SalI GTCGAC 2 cut(s) 365, 1242
SaqAI TTAA 2 cut(s) 585, 1083
SatI GCNGC 5 cut(s) 85, 139, 160, 555, 715
Sau96I GGNCC 5 cut(s) 161, 271, 476, 798, 1784
ScaI AGTACT 1 cut(s) 1047
SchI GAGTC 4 cut(s) 239, 240, 677, 1726
ScrFI CCNGG 2 cut(s) 149, 1221
SduI GDGCHC 4 cut(s) 201, 411, 656, 1168
SfaNI GCATC 4 cut(s) 173, 448, 1639, 1764
SfcI CTRYAG 2 cut(s) 82, 1528
SfoI GGCGCC 1 cut(s) 142
Sfr274I CTCGAG 2 cut(s) 397, 1287
Sfr303I CCGCGG 1 cut(s) 1312
SfuI TTCGAA 1 cut(s) 692
SgrBI CCGCGG 1 cut(s) 1312
SgrDI CGTCGACG 1 cut(s) 365
SinI GGWCC 2 cut(s) 476, 1784
SlaI CTCGAG 2 cut(s) 397, 1287
SmiMI CAYNNNNRTG 3 cut(s) 757, 1119, 1599
SmlI CTYRAG 3 cut(s) 319, 397, 1287
SmoI CTYRAG 3 cut(s) 319, 397, 1287
SspDI GGCGCC 1 cut(s) 140
SspI AATATT 2 cut(s) 1270, 1357
SspMI CTAG 9 cut(s) 734, 878, 1095, 1199, 1247, 1295, 1403, 1634, 1640
StyD4I CCNGG 2 cut(s) 147, 1219
StyI CCWWGG 1 cut(s) 733
TaaI ACNGT 6 cut(s) 101, 386, 532, 576, 1000, 1532
TaiI ACGT 3 cut(s) 198, 366, 372
TaqI TCGA 7 cut(s) 243, 366, 398, 692, 911, 1243, 1288
TatI WGTACW 1 cut(s) 1045
TauI GCSGC 4 cut(s) 141, 162, 557, 717
TfiI GAWTC 6 cut(s) 538, 606, 1140, 1580, 1804, 1850
Tru1I TTAA 2 cut(s) 585, 1083
Tru9I TTAA 2 cut(s) 585, 1083
TscAI CASTG 5 cut(s) 161, 647, 677, 1003, 1446
TseFI GTSAC 4 cut(s) 305, 370, 1126, 1855
TseI GCWGC 1 cut(s) 84
Tsp45I GTSAC 4 cut(s) 305, 370, 1126, 1855
TspDTI ATGAA 7 cut(s) 515, 735, 1101, 1164, 1191, 1198, 1851
TspGWI ACGGA 2 cut(s) 43, 618
TspRI CASTG 5 cut(s) 161, 647, 677, 1003, 1446
VpaK11BI GGWCC 2 cut(s) 476, 1784
VspI ATTAAT 1 cut(s) 1083
XapI RAATTY 5 cut(s) 742, 1076, 1205, 1326, 1573
XbaI TCTAGA 2 cut(s) 1198, 1633
XceI RCATGY 2 cut(s) 832, 1186
XhoI CTCGAG 2 cut(s) 397, 1287
XmaJI CCTAGG 1 cut(s) 733
XmiI GTMKAC 5 cut(s) 366, 823, 1002, 1243, 1527
XmnI GAANNNNTTC 1 cut(s) 1608
XspI CTAG 9 cut(s) 734, 878, 1095, 1199, 1247, 1295, 1403, 1634, 1640
ZraI GACGTC 1 cut(s) 370
ZrmI AGTACT 1 cut(s) 1047
Zsp2I ATGCAT 1 cut(s) 1418
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.