Rorug03G0159100

Ring finger domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0004240
Physical Location & Seq
Forward (+)
13186895 .. 13190671
3777 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0159100.1

Sequence Viewer

Length: 1755 bp
ATGGCAACAGCTACAAAGGAACGATCTTTGGAGCAAACGCCGACGTGGGCCGTTGCCGTTGTTTGTTTCTTTTTGGTTTTGGTCTCCATCATCATCGAGTATATCCTTCATTTGATCGGAAAGTGGTTGGAAAGGAAGAATAAACGAGCTCTCTATGAAGCACTGGAAAAGATCAAAGCAGAGCTTATGTTATTGGGGTTCCTCTCGCTGCTGCTAACAGTAGGACAAGGGCCCATTTCGGACATTTGCATATCAAAGTCTGTTGGGGCCACTTGGCATCCATGTAGTAAGAAGCAAGAGACGGTCTATGCAGGGAAGGATGAAGAGAGCACTAGTCCCGAATCAGATGATGACAGCGGCCGCAGAAGGCTACTATCGGCGGTTCTCTCGAGTTCCGGTGAGAGTGCCCGACGTGTTTTGGCCGCAGCCGGATATGACAAATGTGGTGCCCAGGGAAAAGTTCCGTTTGTGTCATTTTATGGGATTCACCAGCTTCATATACTCATCTTCGTGCTAGCCGTTTCCCACGTGCTTTACTGCATAATAACACTGGTTTTGGGCCGAGCAAAGATGAGGAGATGGAAAAAATGGGAATTGGAAACCAGGACAGTAGACTACCAGTTCTCACATGACCCAGAAAGATTCAGATTTGCCAGAGACACATCGTTTGGGCGAAGGCACTTGAGCTTTTGGAGCCAGTCACCCATTTTGTTATGGATTGTTTGCTTCTTCAGACAGTTTATCAGATCAGTGCCTAAGGTCGATTACCTGACGCTACGCAACGGGTTTATCTTTGCACATTTGGCACCTCAGAGTCAAACCAAGTTTGATTTCCAGAAGTACATTAACAGATCACTTGAAGAGGATTTCAAGGTGGTGGTGGGGATCAGCCCTCCTATCTGGTTATTCGCTGTATTGTTCCTGCTATCTAACACCCACGGCTCACGTTCATATCTCTATCTACCCTTTATTCCACTAGTCATGATCTTATTAGTAGGGACAAAGCTACAGGTTATAATAACCAAGATGGGACTTAAAATTCAAGAGAGGGGAGAAGTGGTTAAGGGGACCCCGCTTGTTGAGCCTGGTGACCATCTTTTCTGGTTCAACAACCCACATCTTATTCTTCACATCATCCATTTTGTTCTCTTTCAGAATGCTTTTCAACTTGCTTTCTTTGCGTGGACTTGGTATGAATTTGGGTTGAAGTCTTGCTTCCATGACAAGCTGGAAGATGTAGTCTTAAGATTAACAATGGGGGTCATCATACAAATACTATGCAGCTATGTAACTCTTCCTCTTTATGCCTTGGTAACACAGATGGGTTCAACTATGAAGCCTACAATCTTTAATGATAGAGTGGCAAATGCTATAAGAAAGTGGCACCACGCAGCAAAGAAGCATGTAAAACAGAGCAAGCATTCAGTTCCAACCAGTGCACCCGGCACTCCATTACATGGCATGTCCCCTGTTCATCTTCTGCGGCATTATCAATCCGAACAGGACGTGGAAAGTATGCATACATTACCAAGGATGTCGTACTTTGGAAGTGAAGGTCCAAACGAGTCCCCATCTCGCCATGACAATGATGATGTACCGTGGTCTAACCAGGGTCAGGAGGAAGAGATTAGTGCTCATTATCAACCTAACTCGGTGAACAATCCTCTACCTGGTCATGGTAATCGAATTCAACACGAAATCCAAATTTTCTCATTGGAGAAAAATACTAGCCGGCCACCTGCAACACAACAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2

Protein Analysis

584

Amino Acids

66.72

Weight (kDa)

9.16

Isoelectric Point (pI)

51.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mlo PF03094 7 - 497 3.1e-240 Mlo family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1016
AarI CACCTGC 1 cut(s) 1747
Acc36I ACCTGC 1 cut(s) 1747
AccB1I GGYRCC 3 cut(s) 446, 805, 1383
AccB7I CCANNNNNTGG 1 cut(s) 1457
AccI GTMKAC 1 cut(s) 612
AciI CCGC 6 cut(s) 357, 361, 380, 423, 1073, 1483
AclWI GGATC 1 cut(s) 893
AcoI YGGCCR 3 cut(s) 358, 420, 1733
AcsI RAATTY 4 cut(s) 1038, 1196, 1686, 1704
AcuI CTGAAG 1 cut(s) 715
AcvI CACGTG 1 cut(s) 529
AfaI GTAC 3 cut(s) 842, 1541, 1596
AfiI CCNNNNNNNGG 4 cut(s) 1457, 1615, 1670, 1676
AflII CTTAAG 1 cut(s) 1243
AflIII ACRYGT 1 cut(s) 412
AgsI TTSAA 8 cut(s) 860, 871, 1043, 1108, 1166, 1207, 1329, 1691
AhlI ACTAGT 2 cut(s) 332, 976
AjiI CACGTC 3 cut(s) 45, 413, 1507
AjnI CCWGG 5 cut(s) 450, 602, 1084, 1608, 1669
AjuI GAANNNNNNNTTGG 2 cut(s) 815, 847
AluBI AGCT 8 cut(s) 11, 149, 184, 493, 687, 1006, 1228, 1284
AluI AGCT 8 cut(s) 11, 149, 184, 493, 687, 1006, 1228, 1284
Alw21I GWGCWC 4 cut(s) 151, 332, 1441, 1636
Alw26I GTCTC 3 cut(s) 88, 293, 651
Alw44I GTGCAC 1 cut(s) 1437
AlwI GGATC 1 cut(s) 893
Ama87I CYCGRG 1 cut(s) 388
AoxI GGCC 7 cut(s) 48, 230, 267, 358, 420, 559, 1733
ApaI GGGCCC 1 cut(s) 234
ApaLI GTGCAC 1 cut(s) 1437
ApeKI GCWGC 5 cut(s) 208, 211, 425, 1281, 1391
ApoI RAATTY 4 cut(s) 1038, 1196, 1686, 1704
ArsI GACNNNNNNTTYG 2 cut(s) 650, 682
AspS9I GGNCC 7 cut(s) 48, 230, 231, 267, 559, 1068, 1556
AsuC2I CCSGG 1 cut(s) 1443
AsuHPI GGTGA 5 cut(s) 410, 479, 693, 1100, 1666
AsuNHI GCTAGC 1 cut(s) 514
AvaI CYCGRG 1 cut(s) 388
AvaII GGWCC 2 cut(s) 1068, 1556
AxyI CCTNAGG 1 cut(s) 756
BaeGI GKGCMC 4 cut(s) 234, 409, 451, 1441
BanI GGYRCC 3 cut(s) 446, 805, 1383
BanII GRGCYC 2 cut(s) 151, 234
BbrPI CACGTG 1 cut(s) 529
Bbv12I GWGCWC 4 cut(s) 151, 332, 1441, 1636
BbvI GCAGC 5 cut(s) 195, 198, 437, 1293, 1403
BccI CCATC 6 cut(s) 95, 573, 1021, 1101, 1315, 1579
BceAI ACGGC 4 cut(s) 35, 41, 503, 955
BciT130I CCWGG 5 cut(s) 452, 604, 1086, 1610, 1671
BcnI CCSGG 1 cut(s) 1443
BcoDI GTCTC 3 cut(s) 88, 293, 651
BcuI ACTAGT 2 cut(s) 332, 976
BfaI CTAG 4 cut(s) 333, 515, 977, 1728
BfmI CTRYAG 1 cut(s) 1007
BfrI CTTAAG 1 cut(s) 1243
BfuAI ACCTGC 1 cut(s) 1747
BisI GCNGC 9 cut(s) 209, 212, 358, 361, 423, 426, 1282, 1392, 1484
BlsI GCNGC 9 cut(s) 210, 213, 359, 362, 424, 427, 1283, 1393, 1485
Bme1390I CCNGG 6 cut(s) 452, 604, 1086, 1443, 1610, 1671
Bme18I GGWCC 2 cut(s) 1068, 1556
BmeT110I CYCGRG 1 cut(s) 388
BmgBI CACGTC 3 cut(s) 45, 413, 1507
BmgT120I GGNCC 7 cut(s) 48, 230, 231, 267, 559, 1068, 1556
BmiI GGNNCC 9 cut(s) 200, 232, 268, 448, 695, 807, 1069, 1070, 1385
BmrFI CCNGG 6 cut(s) 452, 604, 1086, 1443, 1610, 1671
BmsI GCATC 1 cut(s) 286
BmtI GCTAGC 1 cut(s) 518
BpuEI CTTGAG 1 cut(s) 703
BpuMI CCSGG 1 cut(s) 1443
BsaAI YACGTR 1 cut(s) 529
BsaI GGTCTC 1 cut(s) 88
BsaJI CCNNGG 7 cut(s) 450, 451, 937, 1308, 1529, 1598, 1609
BsaWI WCCGGW 1 cut(s) 395
BsaXI ACNNNNNCTCC 2 cut(s) 1044, 1074
Bsc4I CCNNNNNNNGG 4 cut(s) 1457, 1615, 1670, 1676
Bse118I RCCGGY 1 cut(s) 1731
Bse1I ACTGG 5 cut(s) 168, 555, 619, 697, 1434
Bse21I CCTNAGG 1 cut(s) 756
BseBI CCWGG 5 cut(s) 452, 604, 1086, 1610, 1671
BseDI CCNNGG 7 cut(s) 450, 451, 937, 1308, 1529, 1598, 1609
BseGI GGATG 4 cut(s) 277, 325, 1134, 1539
BseLI CCNNNNNNNGG 4 cut(s) 1457, 1615, 1670, 1676
BseMII CTCAG 1 cut(s) 824
BseNI ACTGG 5 cut(s) 168, 555, 619, 697, 1434
BseRI GAGGAG 1 cut(s) 589
BseSI GKGCMC 4 cut(s) 234, 409, 451, 1441
BseX3I CGGCCG 1 cut(s) 358
BseXI GCAGC 5 cut(s) 195, 198, 437, 1293, 1403
Bsh1285I CGRYCG 1 cut(s) 361
BshFI GGCC 7 cut(s) 50, 232, 269, 360, 422, 561, 1735
BshNI GGYRCC 3 cut(s) 446, 805, 1383
BsiEI CGRYCG 1 cut(s) 361
BsiHKAI GWGCWC 4 cut(s) 151, 332, 1441, 1636
BsiHKCI CYCGRG 1 cut(s) 388
BsiSI CCGG 4 cut(s) 396, 429, 1443, 1732
BslFI GGGAC 6 cut(s) 321, 1012, 1044, 1081, 1450, 1552
BslI CCNNNNNNNGG 4 cut(s) 1457, 1615, 1670, 1676
BsmAI GTCTC 3 cut(s) 88, 293, 651
BsmBI CGTCTC 1 cut(s) 293
BsmFI GGGAC 6 cut(s) 321, 1012, 1044, 1081, 1450, 1552
BsmI GAATGC 2 cut(s) 1162, 1420
BsnI GGCC 7 cut(s) 50, 232, 269, 360, 422, 561, 1735
Bso31I GGTCTC 1 cut(s) 88
BsoBI CYCGRG 1 cut(s) 388
Bsp120I GGGCCC 1 cut(s) 230
Bsp1286I GDGCHC 7 cut(s) 151, 234, 332, 409, 451, 1441, 1636
Bsp143I GATC 7 cut(s) 23, 114, 171, 746, 851, 885, 984
BspACI CCGC 6 cut(s) 357, 361, 380, 423, 1073, 1483
BspANI GGCC 7 cut(s) 50, 232, 269, 360, 422, 561, 1735
BspCNI CTCAG 1 cut(s) 823
BspHI TCATGA 1 cut(s) 981
BspLI GGNNCC 9 cut(s) 200, 232, 268, 448, 695, 807, 1069, 1070, 1385
BspMI ACCTGC 1 cut(s) 1747
BspOI GCTAGC 1 cut(s) 518
BspPI GGATC 1 cut(s) 893
BspT107I GGYRCC 3 cut(s) 446, 805, 1383
BspTI CTTAAG 1 cut(s) 1243
BspTNI GGTCTC 1 cut(s) 88
BsrFI RCCGGY 1 cut(s) 1731
BsrI ACTGG 5 cut(s) 168, 555, 619, 697, 1434
BssAI RCCGGY 1 cut(s) 1731
BssECI CCNNGG 7 cut(s) 450, 451, 937, 1308, 1529, 1598, 1609
BssMI GATC 7 cut(s) 23, 114, 171, 746, 851, 885, 984
BssT1I CCWWGG 2 cut(s) 1308, 1529
Bst2UI CCWGG 5 cut(s) 452, 604, 1086, 1610, 1671
Bst4CI ACNGT 5 cut(s) 220, 304, 610, 738, 1599
Bst6I CTCTTC 4 cut(s) 318, 855, 1299, 1617
BstAFI CTTAAG 1 cut(s) 1243
BstBAI YACGTR 1 cut(s) 529
BstC8I GCNNGC 3 cut(s) 516, 1418, 1733
BstDEI CTNAG 2 cut(s) 756, 810
BstDSI CCRYGG 2 cut(s) 937, 1598
BstEII GGTNACC 1 cut(s) 1088
BstF5I GGATG 4 cut(s) 277, 325, 1134, 1539
BstKTI GATC 7 cut(s) 26, 117, 174, 749, 854, 888, 987
BstMAI GTCTC 3 cut(s) 88, 293, 651
BstMBI GATC 7 cut(s) 23, 114, 171, 746, 851, 885, 984
BstMCI CGRYCG 1 cut(s) 361
BstMWI GCNNNNNNNGC 4 cut(s) 693, 803, 1081, 1178
BstNI CCWGG 5 cut(s) 452, 604, 1086, 1610, 1671
BstNSI RCATGY 2 cut(s) 1406, 1465
BstPI GGTNACC 1 cut(s) 1088
BstSCI CCNGG 6 cut(s) 450, 602, 1084, 1441, 1608, 1669
BstSFI CTRYAG 1 cut(s) 1007
BstSLI GKGCMC 4 cut(s) 234, 409, 451, 1441
BstV1I GCAGC 5 cut(s) 195, 198, 437, 1293, 1403
BstZI CGGCCG 1 cut(s) 358
Bsu36I CCTNAGG 1 cut(s) 756
BsuRI GGCC 7 cut(s) 50, 232, 269, 360, 422, 561, 1735
BtgI CCRYGG 2 cut(s) 937, 1598
BtrI CACGTC 3 cut(s) 45, 413, 1507
BtsCI GGATG 4 cut(s) 277, 325, 1134, 1539
BtsIMutI CAGTG 4 cut(s) 161, 548, 756, 1441
BveI ACCTGC 1 cut(s) 1747
Cac8I GCNNGC 3 cut(s) 516, 1418, 1733
CciI TCATGA 1 cut(s) 981
CciNI GCGGCCGC 1 cut(s) 358
Cfr10I RCCGGY 1 cut(s) 1731
Cfr13I GGNCC 7 cut(s) 48, 230, 231, 267, 559, 1068, 1556
CseI GACGC 1 cut(s) 781
CsiI ACCWGGT 1 cut(s) 1669
Csp6I GTAC 3 cut(s) 841, 1540, 1595
CviAII CATG 9 cut(s) 282, 629, 982, 1220, 1403, 1457, 1462, 1580, 1676
CviQI GTAC 3 cut(s) 841, 1540, 1595
DdeI CTNAG 2 cut(s) 756, 810
DpnI GATC 7 cut(s) 25, 116, 173, 748, 853, 887, 986
DpnII GATC 7 cut(s) 23, 114, 171, 746, 851, 885, 984
EaeI YGGCCR 3 cut(s) 358, 420, 1733
EagI CGGCCG 1 cut(s) 358
Eam1104I CTCTTC 4 cut(s) 318, 855, 1299, 1617
EarI CTCTTC 4 cut(s) 318, 855, 1299, 1617
Ecl136II GAGCTC 1 cut(s) 149
EclXI CGGCCG 1 cut(s) 358
Eco130I CCWWGG 2 cut(s) 1308, 1529
Eco24I GRGCYC 2 cut(s) 151, 234
Eco31I GGTCTC 1 cut(s) 88
Eco47I GGWCC 2 cut(s) 1068, 1556
Eco52I CGGCCG 1 cut(s) 358
Eco53kI GAGCTC 1 cut(s) 149
Eco57I CTGAAG 1 cut(s) 715
Eco72I CACGTG 1 cut(s) 529
Eco81I CCTNAGG 1 cut(s) 756
Eco88I CYCGRG 1 cut(s) 388
Eco91I GGTNACC 1 cut(s) 1088
EcoICRI GAGCTC 1 cut(s) 149
EcoO109I RGGNCCY 2 cut(s) 230, 1068
EcoO65I GGTNACC 1 cut(s) 1088
EcoRI GAATTC 1 cut(s) 1686
EcoRII CCWGG 5 cut(s) 450, 602, 1084, 1608, 1669
EcoT14I CCWWGG 2 cut(s) 1308, 1529
EcoT22I ATGCAT 1 cut(s) 1521
EcoT38I GRGCYC 2 cut(s) 151, 234
ErhI CCWWGG 2 cut(s) 1308, 1529
Esp3I CGTCTC 1 cut(s) 293
FaeI CATG 9 cut(s) 285, 632, 985, 1223, 1406, 1460, 1465, 1583, 1679
FalI AAGNNNNNCTT 4 cut(s) 168, 200, 1199, 1231
FaqI GGGAC 6 cut(s) 321, 1012, 1044, 1081, 1450, 1552
FatI CATG 9 cut(s) 281, 628, 981, 1219, 1402, 1456, 1461, 1579, 1675
FauI CCCGC 1 cut(s) 1080
FblI GTMKAC 1 cut(s) 612
Fnu4HI GCNGC 9 cut(s) 209, 212, 358, 361, 423, 426, 1282, 1392, 1484
FokI GGATG 4 cut(s) 264, 332, 1121, 1546
FriOI GRGCYC 2 cut(s) 151, 234
Fsp4HI GCNGC 9 cut(s) 209, 212, 358, 361, 423, 426, 1282, 1392, 1484
FspBI CTAG 4 cut(s) 333, 515, 977, 1728
GluI GCNGC 9 cut(s) 209, 212, 358, 361, 423, 426, 1282, 1392, 1484
HaeIII GGCC 7 cut(s) 50, 232, 269, 360, 422, 561, 1735
HapII CCGG 4 cut(s) 396, 429, 1443, 1732
HgaI GACGC 1 cut(s) 781
Hin1II CATG 9 cut(s) 285, 632, 985, 1223, 1406, 1460, 1465, 1583, 1679
HinfI GANTC 5 cut(s) 341, 484, 642, 814, 1565
HpaII CCGG 4 cut(s) 396, 429, 1443, 1732
HphI GGTGA 5 cut(s) 410, 479, 693, 1100, 1666
Hpy166II GTNNAC 4 cut(s) 613, 1185, 1439, 1657
Hpy188I TCNGA 9 cut(s) 119, 241, 346, 647, 734, 746, 813, 1155, 1498
Hpy188III TCNNGA 6 cut(s) 338, 388, 835, 982, 1043, 1616
Hpy8I GTNNAC 4 cut(s) 613, 1185, 1439, 1657
Hpy99I CGWCG 2 cut(s) 46, 414
HpyAV CCTTC 5 cut(s) 116, 310, 360, 669, 1547
HpyCH4III ACNGT 5 cut(s) 220, 304, 610, 738, 1599
HpyCH4IV ACGT 5 cut(s) 44, 412, 528, 946, 1506
HpyCH4V TGCA 8 cut(s) 249, 311, 540, 797, 1281, 1439, 1519, 1742
HpyF10VI GCNNNNNNNGC 4 cut(s) 693, 803, 1081, 1178
HpyF3I CTNAG 2 cut(s) 756, 810
HpySE526I ACGT 5 cut(s) 44, 412, 528, 946, 1506
Hsp92II CATG 9 cut(s) 285, 632, 985, 1223, 1406, 1460, 1465, 1583, 1679
KflI GGGWCCC 1 cut(s) 1068
KroI GCCGGC 1 cut(s) 1731
KroNI GCCGGC 1 cut(s) 1733
Kzo9I GATC 7 cut(s) 23, 114, 171, 746, 851, 885, 984
LmnI GCTCC 2 cut(s) 31, 693
Lsp1109I GCAGC 5 cut(s) 195, 198, 437, 1293, 1403
LweI GCATC 1 cut(s) 286
MabI ACCWGGT 1 cut(s) 1669
MaeI CTAG 4 cut(s) 333, 515, 977, 1728
MaeII ACGT 5 cut(s) 44, 412, 528, 946, 1506
MaeIII GTNAC 4 cut(s) 699, 1088, 1288, 1312
MalI GATC 7 cut(s) 25, 116, 173, 748, 853, 887, 986
MboI GATC 7 cut(s) 23, 114, 171, 746, 851, 885, 984
MhlI GDGCHC 7 cut(s) 151, 234, 332, 409, 451, 1441, 1636
MluCI AATT 5 cut(s) 593, 1038, 1196, 1686, 1704
MlyI GAGTC 2 cut(s) 823, 1574
MmeI TCCRAC 2 cut(s) 108, 1454
MnlI CCTC 9 cut(s) 212, 567, 819, 856, 903, 1041, 1308, 1612, 1674
Mph1103I ATGCAT 1 cut(s) 1521
MroNI GCCGGC 1 cut(s) 1731
MseI TTAA 6 cut(s) 846, 1035, 1062, 1244, 1250, 1350
MslI CAYNNNNRTG 3 cut(s) 509, 1584, 1750
MspA1I CMGCKG 1 cut(s) 357
MspCI CTTAAG 1 cut(s) 1243
MspI CCGG 4 cut(s) 396, 429, 1443, 1732
MspR9I CCNGG 6 cut(s) 452, 604, 1086, 1443, 1610, 1671
Mva1269I GAATGC 2 cut(s) 1162, 1420
MvaI CCWGG 5 cut(s) 452, 604, 1086, 1610, 1671
MwoI GCNNNNNNNGC 4 cut(s) 693, 803, 1081, 1178
NaeI GCCGGC 1 cut(s) 1733
NciI CCSGG 1 cut(s) 1443
NdeII GATC 7 cut(s) 23, 114, 171, 746, 851, 885, 984
NgoMIV GCCGGC 1 cut(s) 1731
NheI GCTAGC 1 cut(s) 514
NlaIII CATG 9 cut(s) 285, 632, 985, 1223, 1406, 1460, 1465, 1583, 1679
NlaIV GGNNCC 9 cut(s) 200, 232, 268, 448, 695, 807, 1069, 1070, 1385
NmeAIII GCCGAG 1 cut(s) 587
NmuCI GTSAC 2 cut(s) 699, 1088
NotI GCGGCCGC 1 cut(s) 358
NsiI ATGCAT 1 cut(s) 1521
NspI RCATGY 2 cut(s) 1406, 1465
PaeR7I CTCGAG 1 cut(s) 388
PagI TCATGA 1 cut(s) 981
PaqCI CACCTGC 1 cut(s) 1747
PasI CCCWGGG 1 cut(s) 451
PcsI WCGNNNNNNNCGW 1 cut(s) 516
PctI GAATGC 2 cut(s) 1162, 1420
PdiI GCCGGC 1 cut(s) 1733
PfeI GAWTC 3 cut(s) 341, 484, 642
PflMI CCANNNNNTGG 1 cut(s) 1457
PkrI GCNGC 9 cut(s) 210, 213, 359, 362, 424, 427, 1283, 1393, 1485
PleI GAGTC 2 cut(s) 822, 1573
PmaCI CACGTG 1 cut(s) 529
PmlI CACGTG 1 cut(s) 529
PpsI GAGTC 2 cut(s) 822, 1573
Ppu21I YACGTR 1 cut(s) 529
PpuMI RGGWCCY 1 cut(s) 1068
PsiI TTATAA 1 cut(s) 1016
Psp124BI GAGCTC 1 cut(s) 151
Psp5II RGGWCCY 1 cut(s) 1068
Psp6I CCWGG 5 cut(s) 450, 602, 1084, 1608, 1669
PspCI CACGTG 1 cut(s) 529
PspEI GGTNACC 1 cut(s) 1088
PspGI CCWGG 5 cut(s) 450, 602, 1084, 1608, 1669
PspN4I GGNNCC 9 cut(s) 200, 232, 268, 448, 695, 807, 1069, 1070, 1385
PspOMI GGGCCC 1 cut(s) 230
PspPI GGNCC 7 cut(s) 48, 230, 231, 267, 559, 1068, 1556
PspPPI RGGWCCY 1 cut(s) 1068
RsaI GTAC 3 cut(s) 842, 1541, 1596
RsaNI GTAC 3 cut(s) 841, 1540, 1595
RseI CAYNNNNRTG 3 cut(s) 509, 1584, 1750
SacI GAGCTC 1 cut(s) 151
SaqAI TTAA 6 cut(s) 846, 1035, 1062, 1244, 1250, 1350
SatI GCNGC 9 cut(s) 209, 212, 358, 361, 423, 426, 1282, 1392, 1484
Sau3AI GATC 7 cut(s) 23, 114, 171, 746, 851, 885, 984
Sau96I GGNCC 7 cut(s) 48, 230, 231, 267, 559, 1068, 1556
SchI GAGTC 2 cut(s) 823, 1574
ScrFI CCNGG 6 cut(s) 452, 604, 1086, 1443, 1610, 1671
SduI GDGCHC 7 cut(s) 151, 234, 332, 409, 451, 1441, 1636
SexAI ACCWGGT 1 cut(s) 1669
SfaNI GCATC 1 cut(s) 286
SfcI CTRYAG 1 cut(s) 1007
Sfr274I CTCGAG 1 cut(s) 388
SinI GGWCC 2 cut(s) 1068, 1556
SlaI CTCGAG 1 cut(s) 388
SmiMI CAYNNNNRTG 3 cut(s) 509, 1584, 1750
SmlI CTYRAG 3 cut(s) 388, 682, 1243
SmoI CTYRAG 3 cut(s) 388, 682, 1243
SpeI ACTAGT 2 cut(s) 332, 976
Sse9I AATT 5 cut(s) 593, 1038, 1196, 1686, 1704
SsiI CCGC 6 cut(s) 357, 361, 380, 423, 1073, 1483
SspMI CTAG 4 cut(s) 333, 515, 977, 1728
SstI GAGCTC 1 cut(s) 151
StyD4I CCNGG 6 cut(s) 450, 602, 1084, 1441, 1608, 1669
StyI CCWWGG 2 cut(s) 1308, 1529
TaaI ACNGT 5 cut(s) 220, 304, 610, 738, 1599
TaiI ACGT 5 cut(s) 47, 415, 531, 949, 1509
TaqI TCGA 4 cut(s) 96, 389, 762, 1684
TasI AATT 5 cut(s) 593, 1038, 1196, 1686, 1704
TatI WGTACW 1 cut(s) 840
TauI GCSGC 4 cut(s) 360, 363, 425, 1486
TfiI GAWTC 3 cut(s) 341, 484, 642
Tru1I TTAA 6 cut(s) 846, 1035, 1062, 1244, 1250, 1350
Tru9I TTAA 6 cut(s) 846, 1035, 1062, 1244, 1250, 1350
TscAI CASTG 4 cut(s) 168, 555, 756, 1441
TseFI GTSAC 2 cut(s) 699, 1088
TseI GCWGC 5 cut(s) 208, 211, 425, 1281, 1391
Tsp45I GTSAC 2 cut(s) 699, 1088
TspDTI ATGAA 8 cut(s) 98, 171, 336, 485, 939, 1209, 1349, 1463
TspGWI ACGGA 1 cut(s) 453
TspRI CASTG 4 cut(s) 168, 555, 756, 1441
Van91I CCANNNNNTGG 1 cut(s) 1457
Vha464I CTTAAG 1 cut(s) 1243
VneI GTGCAC 1 cut(s) 1437
VpaK11BI GGWCC 2 cut(s) 1068, 1556
XapI RAATTY 4 cut(s) 1038, 1196, 1686, 1704
XceI RCATGY 2 cut(s) 1406, 1465
XhoI CTCGAG 1 cut(s) 388
XmiI GTMKAC 1 cut(s) 612
XspI CTAG 4 cut(s) 333, 515, 977, 1728
Zsp2I ATGCAT 1 cut(s) 1521
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.