Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0011126

Physical Location & Seq

Genomic Coordinates Reverse (-)

14334635 .. 14335102

Gene Structure 468 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G119300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 468 bp

ATGAAGCCCATCGACGCCAAGAAAGACACGGTGACGATCCGAGCGGTGAGCCACGACGAGGAGGGTCGAAAGAGAGAGGAGAAGACGGAGCTCCACACCCACAACGTCGACACAATCAAGTACATCGAGAAGAAGCTCGTCGACAAAGGCGTGCAGCGCCTCGAGCGCCACCCGAGAGACGGGACTGGGATCGGGCAGCCGCAGCCGAAGTCCGGCCACGGGGGCAAGTACACTTGGGAGGGGCCTGATGACGTGGCGGAGAATGAGATGGACCCGGTCCCACCGGCTATTGATGAGGGGGACCCGAACTACGTGGACGAGGTGGCGGAGGAGAGGATTGTGAAGGGGGAGGATGCTGACGTGGCGGGGTTGGTGGTGGGGAAGGTTGAGGTGGCTAAGGCTGCTGAGAACAGGGAGGGCGTTGCTAGGGTTGAGGTGGTTCCTCCTCACAACCACCTCGAAACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

156

Amino Acids

17.14

Weight (kDa)

5.1

Isoelectric Point (pI)

21.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011126)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10020 AT3G10020
fragaria_vesca	FvH4_6g17700 FvH4_6g17700
malus_domestica	MD12G1016000.v1.1 MD14G1014200.v1.1
prunus_persica	Prupe.7G091800_v2.0.a1 Prupe.7G119300_v2.0.a1
pyrus_communis	pycom12g01320
rosa_chinensis	RchiOBHm_Chr3g0471911
rosa_laevigata	RLG00000024119
rosa_multiflora	Rmu_co8333165.1_g000001 Rmu_sc0000090.1_g000009 Rmu_sc0000423.1_g000008
rosa_roxburghii	Rroxscaffold_6G00409420
rosa_rugosa	Rorug03G0121100
rosa_samantha	Rh3AG172600 Rh3BG198000 Rh3CG188900 Rh3CG196400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	44
AccI	GTMKAC	2 cut(s)	108, 141
AciI	CCGC	5 cut(s)	44, 200, 257, 326, 365
AclWI	GGATC	2 cut(s)	31, 197
AcoI	YGGCCR	1 cut(s)	214
AcyI	GRCGYC	1 cut(s)	15
AfaI	GTAC	2 cut(s)	122, 230
AfiI	CCNNNNNNNGG	4 cut(s)	58, 179, 212, 219
AjiI	CACGTC	2 cut(s)	253, 361
AluBI	AGCT	2 cut(s)	91, 136
AluI	AGCT	2 cut(s)	91, 136
Alw21I	GWGCWC	1 cut(s)	93
Alw26I	GTCTC	1 cut(s)	171
AlwI	GGATC	2 cut(s)	31, 197
Ama87I	CYCGRG	2 cut(s)	161, 172
AoxI	GGCC	2 cut(s)	214, 242
ApeKI	GCWGC	4 cut(s)	154, 196, 202, 401
AspLEI	GCGC	2 cut(s)	159, 168
AspS9I	GGNCC	4 cut(s)	242, 271, 277, 301
AsuC2I	CCSGG	1 cut(s)	275
AsuHPI	GGTGA	2 cut(s)	43, 58
AvaI	CYCGRG	2 cut(s)	161, 172
AvaII	GGWCC	3 cut(s)	271, 277, 301
BanII	GRGCYC	1 cut(s)	93
BbsI	GAAGAC	1 cut(s)	89
Bbv12I	GWGCWC	1 cut(s)	93
BbvI	GCAGC	4 cut(s)	166, 208, 214, 388
BccI	CCATC	2 cut(s)	17, 262
BcnI	CCSGG	1 cut(s)	275
BcoDI	GTCTC	1 cut(s)	171
BfaI	CTAG	1 cut(s)	426
BfoI	RGCGCY	2 cut(s)	160, 169
BglI	GCCNNNNNGGC	1 cut(s)	222
BisI	GCNGC	5 cut(s)	155, 197, 200, 203, 402
BlsI	GCNGC	5 cut(s)	156, 198, 201, 204, 403
Bme1390I	CCNGG	1 cut(s)	275
Bme18I	GGWCC	3 cut(s)	271, 277, 301
BmeT110I	CYCGRG	2 cut(s)	161, 172
BmgBI	CACGTC	2 cut(s)	253, 361
BmgT120I	GGNCC	4 cut(s)	242, 271, 277, 301
BmiI	GGNNCC	6 cut(s)	243, 273, 279, 302, 303, 441
BmrFI	CCNGG	1 cut(s)	275
BmrI	ACTGGG	1 cut(s)	195
BmsI	GCATC	1 cut(s)	343
BmuI	ACTGGG	1 cut(s)	195
BpiI	GAAGAC	1 cut(s)	89
Bpu10I	CCTNAGC	1 cut(s)	396
BpuMI	CCSGG	1 cut(s)	275
BsaAI	YACGTR	1 cut(s)	313
BsaHI	GRCGYC	1 cut(s)	15
BsaJI	CCNNGG	1 cut(s)	217
Bsc4I	CCNNNNNNNGG	4 cut(s)	58, 179, 212, 219
Bse118I	RCCGGY	1 cut(s)	283
Bse1I	ACTGG	1 cut(s)	190
BseDI	CCNNGG	1 cut(s)	217
BseGI	GGATG	1 cut(s)	358
BseLI	CCNNNNNNNGG	4 cut(s)	58, 179, 212, 219
BseMII	CTCAG	1 cut(s)	396
BseNI	ACTGG	1 cut(s)	190
BseRI	GAGGAG	4 cut(s)	74, 92, 344, 435
BseXI	GCAGC	4 cut(s)	166, 208, 214, 388
BsgI	GTGCAG	1 cut(s)	173
BshFI	GGCC	2 cut(s)	216, 244
BsiHKAI	GWGCWC	1 cut(s)	93
BsiHKCI	CYCGRG	2 cut(s)	161, 172
BsiSI	CCGG	3 cut(s)	213, 275, 284
BslFI	GGGAC	3 cut(s)	196, 263, 314
BslI	CCNNNNNNNGG	4 cut(s)	58, 179, 212, 219
BsmAI	GTCTC	1 cut(s)	171
BsmBI	CGTCTC	1 cut(s)	171
BsmFI	GGGAC	3 cut(s)	196, 263, 314
BsnI	GGCC	2 cut(s)	216, 244
BsoBI	CYCGRG	2 cut(s)	161, 172
Bsp1286I	GDGCHC	1 cut(s)	93
Bsp143I	GATC	2 cut(s)	36, 189
BspACI	CCGC	5 cut(s)	44, 200, 257, 326, 365
BspANI	GGCC	2 cut(s)	216, 244
BspCNI	CTCAG	1 cut(s)	397
BspLI	GGNNCC	6 cut(s)	243, 273, 279, 302, 303, 441
BspPI	GGATC	2 cut(s)	31, 197
BsrBI	CCGCTC	1 cut(s)	44
BsrFI	RCCGGY	1 cut(s)	283
BsrI	ACTGG	1 cut(s)	190
BssAI	RCCGGY	1 cut(s)	283
BssECI	CCNNGG	1 cut(s)	217
BssMI	GATC	2 cut(s)	36, 189
BssNI	GRCGYC	1 cut(s)	15
Bst4CI	ACNGT	1 cut(s)	31
BstACI	GRCGYC	1 cut(s)	15
BstBAI	YACGTR	1 cut(s)	313
BstC8I	GCNNGC	1 cut(s)	152
BstDEI	CTNAG	3 cut(s)	396, 405, 465
BstDSI	CCRYGG	1 cut(s)	217
BstF5I	GGATG	1 cut(s)	358
BstH2I	RGCGCY	2 cut(s)	160, 169
BstHHI	GCGC	2 cut(s)	159, 168
BstKTI	GATC	2 cut(s)	39, 192
BstMAI	GTCTC	1 cut(s)	171
BstMBI	GATC	2 cut(s)	36, 189
BstMWI	GCNNNNNNNGC	7 cut(s)	156, 163, 165, 202, 222, 362, 401
BstSCI	CCNGG	1 cut(s)	273
BstV1I	GCAGC	4 cut(s)	166, 208, 214, 388
BstV2I	GAAGAC	1 cut(s)	89
BsuRI	GGCC	2 cut(s)	216, 244
BtgI	CCRYGG	1 cut(s)	217
BtrI	CACGTC	2 cut(s)	253, 361
BtsCI	GGATG	1 cut(s)	358
Cac8I	GCNNGC	1 cut(s)	152
CfoI	GCGC	2 cut(s)	159, 168
Cfr10I	RCCGGY	1 cut(s)	283
Cfr13I	GGNCC	4 cut(s)	242, 271, 277, 301
CseI	GACGC	1 cut(s)	23
Csp6I	GTAC	2 cut(s)	121, 229
CviQI	GTAC	2 cut(s)	121, 229
DdeI	CTNAG	3 cut(s)	396, 405, 465
DpnI	GATC	2 cut(s)	38, 191
DpnII	GATC	2 cut(s)	36, 189
EaeI	YGGCCR	1 cut(s)	214
EciI	GGCGGA	2 cut(s)	272, 341
Ecl136II	GAGCTC	1 cut(s)	91
Eco24I	GRGCYC	1 cut(s)	93
Eco47I	GGWCC	3 cut(s)	271, 277, 301
Eco53kI	GAGCTC	1 cut(s)	91
Eco88I	CYCGRG	2 cut(s)	161, 172
EcoICRI	GAGCTC	1 cut(s)	91
EcoO109I	RGGNCCY	2 cut(s)	242, 301
EcoT38I	GRGCYC	1 cut(s)	93
Esp3I	CGTCTC	1 cut(s)	171
FaqI	GGGAC	3 cut(s)	196, 263, 314
FauI	CCCGC	1 cut(s)	358
FblI	GTMKAC	2 cut(s)	108, 141
Fnu4HI	GCNGC	5 cut(s)	155, 197, 200, 203, 402
FokI	GGATG	1 cut(s)	365
FriOI	GRGCYC	1 cut(s)	93
Fsp4HI	GCNGC	5 cut(s)	155, 197, 200, 203, 402
FspBI	CTAG	1 cut(s)	426
GlaI	GCGC	2 cut(s)	158, 167
GluI	GCNGC	5 cut(s)	155, 197, 200, 203, 402
HaeII	RGCGCY	2 cut(s)	160, 169
HaeIII	GGCC	2 cut(s)	216, 244
HapII	CCGG	3 cut(s)	213, 275, 284
HgaI	GACGC	1 cut(s)	23
HhaI	GCGC	2 cut(s)	159, 168
Hin1I	GRCGYC	1 cut(s)	15
Hin6I	GCGC	2 cut(s)	157, 166
HinP1I	GCGC	2 cut(s)	157, 166
HincII	GTYRAC	2 cut(s)	109, 142
HindII	GTYRAC	2 cut(s)	109, 142
HpaII	CCGG	3 cut(s)	213, 275, 284
HphI	GGTGA	2 cut(s)	43, 58
Hpy166II	GTNNAC	4 cut(s)	109, 142, 231, 316
Hpy188I	TCNGA	1 cut(s)	41
Hpy188III	TCNNGA	1 cut(s)	127
Hpy8I	GTNNAC	4 cut(s)	109, 142, 231, 316
Hpy99I	CGWCG	4 cut(s)	17, 59, 110, 143
HpyAV	CCTTC	2 cut(s)	337, 376
HpyCH4III	ACNGT	1 cut(s)	31
HpyCH4IV	ACGT	4 cut(s)	105, 252, 312, 360
HpyCH4V	TGCA	1 cut(s)	154
HpyF10VI	GCNNNNNNNGC	7 cut(s)	156, 163, 165, 202, 222, 362, 401
HpyF3I	CTNAG	3 cut(s)	396, 405, 465
HpySE526I	ACGT	4 cut(s)	105, 252, 312, 360
Hsp92I	GRCGYC	1 cut(s)	15
HspAI	GCGC	2 cut(s)	157, 166
KflI	GGGWCCC	1 cut(s)	301
Kzo9I	GATC	2 cut(s)	36, 189
LmnI	GCTCC	2 cut(s)	88, 96
LpnPI	CCDG	6 cut(s)	171, 226, 258, 288, 297, 397
Lsp1109I	GCAGC	4 cut(s)	166, 208, 214, 388
LweI	GCATC	1 cut(s)	343
MaeI	CTAG	1 cut(s)	426
MaeII	ACGT	4 cut(s)	105, 252, 312, 360
MaeIII	GTNAC	1 cut(s)	31
MalI	GATC	2 cut(s)	38, 191
MbiI	CCGCTC	1 cut(s)	44
MboI	GATC	2 cut(s)	36, 189
MboII	GAAGA	2 cut(s)	94, 142
MhlI	GDGCHC	1 cut(s)	93
MspI	CCGG	3 cut(s)	213, 275, 284
MspR9I	CCNGG	1 cut(s)	275
MwoI	GCNNNNNNNGC	7 cut(s)	156, 163, 165, 202, 222, 362, 401
NciI	CCSGG	1 cut(s)	275
NdeII	GATC	2 cut(s)	36, 189
NlaIV	GGNNCC	6 cut(s)	243, 273, 279, 302, 303, 441
NmuCI	GTSAC	1 cut(s)	31
PaeR7I	CTCGAG	1 cut(s)	161
PcsI	WCGNNNNNNNCGW	1 cut(s)	147
PflFI	GACNNNGTC	1 cut(s)	275
PkrI	GCNGC	5 cut(s)	156, 198, 201, 204, 403
Ppu21I	YACGTR	1 cut(s)	313
PpuMI	RGGWCCY	1 cut(s)	301
Psp124BI	GAGCTC	1 cut(s)	93
Psp5II	RGGWCCY	1 cut(s)	301
PspN4I	GGNNCC	6 cut(s)	243, 273, 279, 302, 303, 441
PspPI	GGNCC	4 cut(s)	242, 271, 277, 301
PspPPI	RGGWCCY	1 cut(s)	301
PspXI	VCTCGAGB	1 cut(s)	161
PsyI	GACNNNGTC	1 cut(s)	275
RsaI	GTAC	2 cut(s)	122, 230
RsaNI	GTAC	2 cut(s)	121, 229
SacI	GAGCTC	1 cut(s)	93
SalI	GTCGAC	2 cut(s)	107, 140
SatI	GCNGC	5 cut(s)	155, 197, 200, 203, 402
Sau3AI	GATC	2 cut(s)	36, 189
Sau96I	GGNCC	4 cut(s)	242, 271, 277, 301
ScrFI	CCNGG	1 cut(s)	275
SduI	GDGCHC	1 cut(s)	93
SfaNI	GCATC	1 cut(s)	343
Sfr274I	CTCGAG	1 cut(s)	161
SinI	GGWCC	3 cut(s)	271, 277, 301
SlaI	CTCGAG	1 cut(s)	161
SmlI	CTYRAG	1 cut(s)	161
SmoI	CTYRAG	1 cut(s)	161
SsiI	CCGC	5 cut(s)	44, 200, 257, 326, 365
SspMI	CTAG	1 cut(s)	426
SstI	GAGCTC	1 cut(s)	93
StyD4I	CCNGG	1 cut(s)	273
TaaI	ACNGT	1 cut(s)	31
TaiI	ACGT	4 cut(s)	108, 255, 315, 363
TaqI	TCGA	7 cut(s)	12, 67, 108, 126, 141, 162, 459
TatI	WGTACW	2 cut(s)	120, 228
TauI	GCSGC	1 cut(s)	202
TseFI	GTSAC	1 cut(s)	31
TseI	GCWGC	4 cut(s)	154, 196, 202, 401
Tsp45I	GTSAC	1 cut(s)	31
TspDTI	ATGAA	1 cut(s)	17
TspGWI	ACGGA	1 cut(s)	101
Tth111I	GACNNNGTC	1 cut(s)	275
VpaK11BI	GGWCC	3 cut(s)	271, 277, 301
XhoI	CTCGAG	1 cut(s)	161
XmiI	GTMKAC	2 cut(s)	108, 141
XspI	CTAG	1 cut(s)	426

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.