Prupe.7G134900_v2.0.a1

membrane

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
15253834 .. 15258148
4315 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G134900.1

Sequence Viewer

Length: 1749 bp
ATGGCGCTGTTTCTGTCTCTGTGGTCGTTTTATAGTACCGATTTTACACAGTCTTTCAGCGGTTGTTTGAAGGTTTTCTATGTGGTATTTGCATTCGGCTCTGCTCTCTGTCTGGGTGCTCTTAAAGGACTTCTTGTGGGTCCTATTTCTGCTCTAATACTGATTTTAGGGAATGTGGGGATAATTTTGGGCTTGTTTCCTGCGCATGTTGCCTGGACAATCTACACTCTTATAAAGATTGATAGATTTGACACACCACTTAAAGTTGCCATTTTGTTTGCTTTGCCTGGCCTATTGGCTATATGGTTGGGTTTGAGCATAGCTGGGAGTGTTCTTGGGGGAGTGGGCTATGGATTCTTCACTCCCTGGGTCGCTACATTTGAGGCCTTTAGGCATGACAATGAGTTCAAGAAATTCAAACATTGTATTGTGGATGGAACTTGGGGTACTGTTAAAGGAAGCTGTACTGTTGTTAGAGACTTTGCAGACCTATGTTATCACTCATACTCAATCTATTTGAAGGAATTGCGCGAATCCCCCGCTTCACAGGAAGTTCAACCTCTAAGGTTGATTCACATTCCGGCCTGCATTATAGCTGGTGTATTGGGCCTAATGGTGGAGATTCCTGTTTACACTGCAATTGCTGTTGTAAAGAGTCCATATATGCTGTTTAAGGGCTGGTACCGGCTGATTCATGATCTAATTAGCCGAGAAGGACCATTTCTTGAACTAGCTTGCATCCCTATTGCTGGTTTAACGATCCTTCTGTGGCCAATTGTGGTTGTTGCTAGCATCGTATTGGCAGTTTTCTCAAGCATTTTTATTGGATTGTATGCACCAGTTATCGTATATCAGGAAAGATCTTTCAGGAAAGGTGTGGCCTATGTGATTGCAATGGTGGCTGAATTTGATGAATACACAAATGACTGGCTGTATCTTCGAGAAGGAACTATCTTCCCAAAGCCCAAATATCGAAAAAGAACTGTCTCTCAATCATCCGAGCTTTCTGTGCGAGGAAATCAGGTGGCTGGAGGCAAATTCAGTCCTGCATCTATGGAAGCACCTGCAATGCTTATGCCAACTATAGGCAATTCAAGATCGGTTAGAGCCGTAATACAAGAAGTGAAAATGGTACAGATATGGGAAAATATGATGAGGTCCTGCCAACTGAGGGGTAAGCAACTGTTGGATGCTAATGTGATAACCCCAACCGACCTCGAGGAATGGATGAAAGCAAAGAATAGTAATGATGGATCTATTATCGGTGTCGGTTTGCCTTGTTATTCATGCTTGCAGACTCTTCTCTGCTCCATCAGATCAAATTCATCTGGTTTACTGTTACTGGATGATGTTGAAATTAACCATTTCAATAGACCGCATGACAAATTGTTGGACTGGTTCTTTAATCCTATAATGGTCCTGAAGGAACAGATAAAGGTACAATTGGCAGAGGGTGAGGTTAGATTTTTGGAGAAAGTGGTTCTTTTTGGAGGCAATACACAACGCATGGAGGCTTGGGATAATGGAAGTTTAGCACCTCAAGATGCTCTGAGAGCTGCTCAAATCGAGGGCATTAGTAGAAGGATGATTGGAATGATGAGAAGTGTCTCAAAGTTTCCTACTTACAGAAGGAGATTTCGGCTTGTTGTGAAGGCTTTGATGACACACACCGTACAGAATGAAGCTTCTCATATATGCGTTTCAGTTAAATCTAATACCTCCAGTGAAGATGTGCTGGATGAACCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

583

Amino Acids

64.9

Weight (kDa)

8.69

Isoelectric Point (pI)

40.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 233
AarI CACCTGC 1 cut(s) 1072
AbsI CCTCGAGG 1 cut(s) 1217
Acc16I TGCGCA 1 cut(s) 204
Acc36I ACCTGC 1 cut(s) 1072
Acc65I GGTACC 1 cut(s) 681
AccB1I GGYRCC 1 cut(s) 681
AccII CGCG 1 cut(s) 531
AciI CCGC 3 cut(s) 60, 540, 1376
AclWI GGATC 2 cut(s) 754, 1261
AcoI YGGCCR 1 cut(s) 770
AcsI RAATTY 4 cut(s) 413, 905, 1037, 1321
AcuI CTGAAG 1 cut(s) 1442
AfaI GTAC 7 cut(s) 37, 448, 466, 683, 1134, 1440, 1674
AfiI CCNNNNNNNGG 4 cut(s) 616, 749, 1085, 1171
AgsI TTSAA 9 cut(s) 70, 409, 418, 520, 557, 728, 1095, 1355, 1369
AjnI CCWGG 3 cut(s) 212, 286, 365
AluBI AGCT 7 cut(s) 323, 462, 596, 734, 1003, 1556, 1685
AluI AGCT 7 cut(s) 323, 462, 596, 734, 1003, 1556, 1685
Alw21I GWGCWC 1 cut(s) 121
Alw26I GTCTC 4 cut(s) 21, 471, 991, 1612
AlwI GGATC 2 cut(s) 754, 1261
Ama87I CYCGRG 1 cut(s) 1217
AoxI GGCC 6 cut(s) 289, 384, 582, 607, 770, 879
ApeKI GCWGC 1 cut(s) 1556
ApoI RAATTY 4 cut(s) 413, 905, 1037, 1321
Asp700I GAANNNNTTC 1 cut(s) 74
Asp718I GGTACC 1 cut(s) 681
AspLEI GCGC 3 cut(s) 7, 205, 531
AspS9I GGNCC 5 cut(s) 140, 607, 716, 1158, 1417
AsuHPI GGTGA 1 cut(s) 1466
AsuNHI GCTAGC 1 cut(s) 788
AvaI CYCGRG 1 cut(s) 1217
AvaII GGWCC 4 cut(s) 140, 716, 1158, 1417
BalI TGGCCA 1 cut(s) 772
BanI GGYRCC 1 cut(s) 681
Bbv12I GWGCWC 1 cut(s) 121
BbvI GCAGC 1 cut(s) 1543
BccI CCATC 3 cut(s) 428, 1244, 1319
BceAI ACGGC 1 cut(s) 1094
BciT130I CCWGG 3 cut(s) 214, 288, 367
BcoDI GTCTC 4 cut(s) 21, 471, 991, 1612
BfaI CTAG 2 cut(s) 731, 789
BfmI CTRYAG 1 cut(s) 1083
BfoI RGCGCY 1 cut(s) 8
BfuAI ACCTGC 1 cut(s) 1072
BglII AGATCT 1 cut(s) 860
BisI GCNGC 1 cut(s) 1557
BlsI GCNGC 1 cut(s) 1558
Bme1390I CCNGG 3 cut(s) 214, 288, 367
Bme18I GGWCC 4 cut(s) 140, 716, 1158, 1417
BmeT110I CYCGRG 1 cut(s) 1217
BmgT120I GGNCC 5 cut(s) 140, 607, 716, 1158, 1417
BmiI GGNNCC 2 cut(s) 141, 683
BmrFI CCNGG 3 cut(s) 214, 288, 367
BmsI GCATC 5 cut(s) 747, 801, 1058, 1180, 1534
BmtI GCTAGC 1 cut(s) 792
BplI GAGNNNNNCTC 2 cut(s) 1543, 1575
BpmI CTGGAG 2 cut(s) 1050, 1705
BpuEI CTTGAG 2 cut(s) 796, 1524
BsaJI CCNNGG 2 cut(s) 365, 366
Bsc4I CCNNNNNNNGG 4 cut(s) 616, 749, 1085, 1171
Bse118I RCCGGY 1 cut(s) 684
Bse1I ACTGG 5 cut(s) 839, 932, 1347, 1400, 1722
Bse3DI GCAATG 2 cut(s) 900, 1074
BseBI CCWGG 3 cut(s) 214, 288, 367
BseDI CCNNGG 2 cut(s) 365, 366
BseGI GGATG 8 cut(s) 439, 738, 995, 1195, 1233, 1351, 1590, 1744
BseLI CCNNNNNNNGG 4 cut(s) 616, 749, 1085, 1171
BseMI GCAATG 2 cut(s) 900, 1074
BseMII CTCAG 2 cut(s) 1160, 1541
BseNI ACTGG 5 cut(s) 839, 932, 1347, 1400, 1722
BseXI GCAGC 1 cut(s) 1543
BseYI CCCAGC 1 cut(s) 323
Bsh1236I CGCG 1 cut(s) 531
BshFI GGCC 6 cut(s) 291, 386, 584, 609, 772, 881
BshNI GGYRCC 1 cut(s) 681
BsiHKAI GWGCWC 1 cut(s) 121
BsiHKCI CYCGRG 1 cut(s) 1217
BsiSI CCGG 2 cut(s) 581, 685
BslI CCNNNNNNNGG 4 cut(s) 616, 749, 1085, 1171
BsmAI GTCTC 4 cut(s) 21, 471, 991, 1612
BsmI GAATGC 1 cut(s) 92
BsnI GGCC 6 cut(s) 291, 386, 584, 609, 772, 881
BsoBI CYCGRG 1 cut(s) 1217
Bsp1286I GDGCHC 1 cut(s) 121
Bsp143I GATC 6 cut(s) 697, 759, 860, 1097, 1253, 1316
BspACI CCGC 3 cut(s) 60, 540, 1376
BspANI GGCC 6 cut(s) 291, 386, 584, 609, 772, 881
BspCNI CTCAG 2 cut(s) 1161, 1542
BspFNI CGCG 1 cut(s) 531
BspHI TCATGA 1 cut(s) 694
BspLI GGNNCC 2 cut(s) 141, 683
BspMI ACCTGC 1 cut(s) 1072
BspOI GCTAGC 1 cut(s) 792
BspPI GGATC 2 cut(s) 754, 1261
BspT107I GGYRCC 1 cut(s) 681
BsrDI GCAATG 2 cut(s) 900, 1074
BsrFI RCCGGY 1 cut(s) 684
BsrI ACTGG 5 cut(s) 839, 932, 1347, 1400, 1722
BssAI RCCGGY 1 cut(s) 684
BssECI CCNNGG 2 cut(s) 365, 366
BssMI GATC 6 cut(s) 697, 759, 860, 1097, 1253, 1316
Bst2UI CCWGG 3 cut(s) 214, 288, 367
Bst4CI ACNGT 7 cut(s) 51, 451, 469, 985, 1185, 1338, 1672
Bst6I CTCTTC 1 cut(s) 1305
BstC8I GCNNGC 4 cut(s) 586, 736, 790, 1292
BstDEI CTNAG 3 cut(s) 563, 1169, 1550
BstF5I GGATG 8 cut(s) 439, 738, 995, 1195, 1233, 1351, 1590, 1744
BstFNI CGCG 1 cut(s) 531
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 3 cut(s) 7, 205, 531
BstKTI GATC 6 cut(s) 700, 762, 863, 1100, 1256, 1319
BstMAI GTCTC 4 cut(s) 21, 471, 991, 1612
BstMBI GATC 6 cut(s) 697, 759, 860, 1097, 1253, 1316
BstMWI GCNNNNNNNGC 4 cut(s) 209, 899, 1009, 1553
BstNI CCWGG 3 cut(s) 214, 288, 367
BstNSI RCATGY 1 cut(s) 209
BstSCI CCNGG 3 cut(s) 212, 286, 365
BstSFI CTRYAG 1 cut(s) 1083
BstUI CGCG 1 cut(s) 531
BstV1I GCAGC 1 cut(s) 1543
BstX2I RGATCY 2 cut(s) 860, 1253
BstYI RGATCY 2 cut(s) 860, 1253
BsuRI GGCC 6 cut(s) 291, 386, 584, 609, 772, 881
BtsCI GGATG 8 cut(s) 439, 738, 995, 1195, 1233, 1351, 1590, 1744
BtsI GCAGTG 1 cut(s) 633
BtsIMutI CAGTG 2 cut(s) 633, 1729
BveI ACCTGC 1 cut(s) 1072
Cac8I GCNNGC 4 cut(s) 586, 736, 790, 1292
CciI TCATGA 1 cut(s) 694
CfoI GCGC 3 cut(s) 7, 205, 531
Cfr10I RCCGGY 1 cut(s) 684
Cfr13I GGNCC 5 cut(s) 140, 607, 716, 1158, 1417
Csp6I GTAC 7 cut(s) 36, 447, 465, 682, 1133, 1439, 1673
CviAII CATG 6 cut(s) 206, 395, 695, 1287, 1379, 1507
CviQI GTAC 7 cut(s) 36, 447, 465, 682, 1133, 1439, 1673
DdeI CTNAG 3 cut(s) 563, 1169, 1550
DpnI GATC 6 cut(s) 699, 761, 862, 1099, 1255, 1318
DpnII GATC 6 cut(s) 697, 759, 860, 1097, 1253, 1316
EaeI YGGCCR 1 cut(s) 770
Eam1104I CTCTTC 1 cut(s) 1305
EarI CTCTTC 1 cut(s) 1305
Eco147I AGGCCT 1 cut(s) 386
Eco47I GGWCC 4 cut(s) 140, 716, 1158, 1417
Eco57I CTGAAG 1 cut(s) 1442
Eco88I CYCGRG 1 cut(s) 1217
EcoO109I RGGNCCY 2 cut(s) 140, 1158
EcoRII CCWGG 3 cut(s) 212, 286, 365
FaeI CATG 6 cut(s) 209, 398, 698, 1290, 1382, 1510
FalI AAGNNNNNCTT 4 cut(s) 117, 149, 1467, 1499
FatI CATG 6 cut(s) 205, 394, 694, 1286, 1378, 1506
FauI CCCGC 1 cut(s) 547
Fnu4HI GCNGC 1 cut(s) 1557
FokI GGATG 7 cut(s) 446, 725, 982, 1202, 1240, 1358, 1597
Fsp4HI GCNGC 1 cut(s) 1557
FspBI CTAG 2 cut(s) 731, 789
FspI TGCGCA 1 cut(s) 204
GlaI GCGC 3 cut(s) 6, 204, 530
GluI GCNGC 1 cut(s) 1557
GsaI CCCAGC 1 cut(s) 327
GsuI CTGGAG 2 cut(s) 1050, 1705
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 6 cut(s) 291, 386, 584, 609, 772, 881
HapII CCGG 2 cut(s) 581, 685
HhaI GCGC 3 cut(s) 7, 205, 531
Hin1II CATG 6 cut(s) 209, 398, 698, 1290, 1382, 1510
Hin6I GCGC 3 cut(s) 5, 203, 529
HinP1I GCGC 3 cut(s) 5, 203, 529
HindIII AAGCTT 1 cut(s) 1683
HinfI GANTC 7 cut(s) 354, 533, 571, 622, 655, 691, 1297
HpaII CCGG 2 cut(s) 581, 685
HphI GGTGA 1 cut(s) 1466
Hpy166II GTNNAC 2 cut(s) 631, 1334
Hpy188I TCNGA 3 cut(s) 1000, 1316, 1551
Hpy188III TCNNGA 9 cut(s) 409, 695, 725, 854, 868, 941, 1095, 1420, 1541
Hpy8I GTNNAC 2 cut(s) 631, 1334
HpyAV CCTTC 9 cut(s) 64, 514, 707, 773, 938, 1417, 1575, 1623, 1645
HpyCH4III ACNGT 7 cut(s) 51, 451, 469, 985, 1185, 1338, 1672
HpyF10VI GCNNNNNNNGC 4 cut(s) 209, 899, 1009, 1553
HpyF3I CTNAG 3 cut(s) 563, 1169, 1550
Hsp92II CATG 6 cut(s) 209, 398, 698, 1290, 1382, 1510
HspAI GCGC 3 cut(s) 5, 203, 529
KpnI GGTACC 1 cut(s) 685
Kzo9I GATC 6 cut(s) 697, 759, 860, 1097, 1253, 1316
LmnI GCTCC 1 cut(s) 1313
Lsp1109I GCAGC 1 cut(s) 1543
LweI GCATC 5 cut(s) 747, 801, 1058, 1180, 1534
MaeI CTAG 2 cut(s) 731, 789
MaeIII GTNAC 1 cut(s) 1338
MalI GATC 6 cut(s) 699, 761, 862, 1099, 1255, 1318
MboI GATC 6 cut(s) 697, 759, 860, 1097, 1253, 1316
MboII GAAGA 5 cut(s) 349, 929, 946, 1292, 1739
MfeI CAATTG 3 cut(s) 639, 774, 1442
MflI RGATCY 2 cut(s) 860, 1253
MhlI GDGCHC 1 cut(s) 121
MlsI TGGCCA 1 cut(s) 772
MluNI TGGCCA 1 cut(s) 772
MlyI GAGTC 2 cut(s) 664, 1291
MmeI TCCRAC 2 cut(s) 1167, 1371
Mox20I TGGCCA 1 cut(s) 772
MroXI GAANNNNTTC 1 cut(s) 74
MscI TGGCCA 1 cut(s) 772
MseI TTAA 9 cut(s) 123, 261, 453, 672, 755, 1359, 1404, 1707, 1747
MslI CAYNNNNRTG 1 cut(s) 399
Msp20I TGGCCA 1 cut(s) 772
MspA1I CMGCKG 1 cut(s) 60
MspI CCGG 2 cut(s) 581, 685
MspR9I CCNGG 3 cut(s) 214, 288, 367
MunI CAATTG 3 cut(s) 639, 774, 1442
Mva1269I GAATGC 1 cut(s) 92
MvaI CCWGG 3 cut(s) 214, 288, 367
MvnI CGCG 1 cut(s) 531
MwoI GCNNNNNNNGC 4 cut(s) 209, 899, 1009, 1553
NdeII GATC 6 cut(s) 697, 759, 860, 1097, 1253, 1316
NheI GCTAGC 1 cut(s) 788
NlaIII CATG 6 cut(s) 209, 398, 698, 1290, 1382, 1510
NlaIV GGNNCC 2 cut(s) 141, 683
NmeAIII GCCGAG 1 cut(s) 734
NsbI TGCGCA 1 cut(s) 204
NspI RCATGY 1 cut(s) 209
PaeR7I CTCGAG 1 cut(s) 1217
PagI TCATGA 1 cut(s) 694
PaqCI CACCTGC 1 cut(s) 1072
PasI CCCWGGG 1 cut(s) 366
PceI AGGCCT 1 cut(s) 386
PctI GAATGC 1 cut(s) 92
PdmI GAANNNNTTC 1 cut(s) 74
PfeI GAWTC 5 cut(s) 354, 533, 571, 622, 691
PkrI GCNGC 1 cut(s) 1558
PleI GAGTC 2 cut(s) 663, 1291
PpsI GAGTC 2 cut(s) 663, 1291
PpuMI RGGWCCY 2 cut(s) 140, 1158
PsiI TTATAA 1 cut(s) 233
Psp5II RGGWCCY 2 cut(s) 140, 1158
Psp6I CCWGG 3 cut(s) 212, 286, 365
PspFI CCCAGC 1 cut(s) 323
PspGI CCWGG 3 cut(s) 212, 286, 365
PspN4I GGNNCC 2 cut(s) 141, 683
PspPI GGNCC 5 cut(s) 140, 607, 716, 1158, 1417
PspPPI RGGWCCY 2 cut(s) 140, 1158
PspXI VCTCGAGB 1 cut(s) 1217
PsrI GAACNNNNNNTAC 2 cut(s) 430, 462
PsuI RGATCY 2 cut(s) 860, 1253
RsaI GTAC 7 cut(s) 37, 448, 466, 683, 1134, 1440, 1674
RsaNI GTAC 7 cut(s) 36, 447, 465, 682, 1133, 1439, 1673
RseI CAYNNNNRTG 1 cut(s) 399
SaqAI TTAA 9 cut(s) 123, 261, 453, 672, 755, 1359, 1404, 1707, 1747
SatI GCNGC 1 cut(s) 1557
Sau3AI GATC 6 cut(s) 697, 759, 860, 1097, 1253, 1316
Sau96I GGNCC 5 cut(s) 140, 607, 716, 1158, 1417
SchI GAGTC 2 cut(s) 664, 1291
ScrFI CCNGG 3 cut(s) 214, 288, 367
SduI GDGCHC 1 cut(s) 121
SfaNI GCATC 5 cut(s) 747, 801, 1058, 1180, 1534
SfcI CTRYAG 1 cut(s) 1083
Sfr274I CTCGAG 1 cut(s) 1217
SinI GGWCC 4 cut(s) 140, 716, 1158, 1417
SlaI CTCGAG 1 cut(s) 1217
SmiMI CAYNNNNRTG 1 cut(s) 399
SmlI CTYRAG 3 cut(s) 811, 1217, 1539
SmoI CTYRAG 3 cut(s) 811, 1217, 1539
SseBI AGGCCT 1 cut(s) 386
SsiI CCGC 3 cut(s) 60, 540, 1376
SspMI CTAG 2 cut(s) 731, 789
StuI AGGCCT 1 cut(s) 386
StyD4I CCNGG 3 cut(s) 212, 286, 365
TaaI ACNGT 7 cut(s) 51, 451, 469, 985, 1185, 1338, 1672
TaqI TCGA 4 cut(s) 940, 973, 1218, 1566
TatI WGTACW 1 cut(s) 464
TfiI GAWTC 5 cut(s) 354, 533, 571, 622, 691
Tru1I TTAA 9 cut(s) 123, 261, 453, 672, 755, 1359, 1404, 1707, 1747
Tru9I TTAA 9 cut(s) 123, 261, 453, 672, 755, 1359, 1404, 1707, 1747
TscAI CASTG 2 cut(s) 640, 1729
TseI GCWGC 1 cut(s) 1556
TspDTI ATGAA 6 cut(s) 683, 927, 1244, 1275, 1314, 1695
TspRI CASTG 2 cut(s) 640, 1729
VpaK11BI GGWCC 4 cut(s) 140, 716, 1158, 1417
XapI RAATTY 4 cut(s) 413, 905, 1037, 1321
XceI RCATGY 1 cut(s) 209
XhoI CTCGAG 1 cut(s) 1217
XmnI GAANNNNTTC 1 cut(s) 74
XspI CTAG 2 cut(s) 731, 789
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.