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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G50910 AT5G66480 |
| fragaria_vesca | FvH4_1g12900 FvH4_1g12900 |
| malus_domestica | MD02G1143900.v1.1 MD15G1257200.v1.1 |
| prunus_persica | Prupe.7G157800_v2.0.a1 |
| pyrus_communis | pycom02g11380 pycom15g22510 |
| rosa_chinensis | RchiOBHm_Chr2g0100981 |
| rosa_laevigata | RLG00000017033 |
| rosa_multiflora | Rmu_co8514483.1_g000001 Rmu_sc0001862.1_g000011 |
| rosa_roxburghii | Rroxscaffold_2G00141680 |
| rosa_rugosa | Rorug02G0094700 Rorug02G0094800 |
| rosa_samantha | Rh2AG141900 Rh2BG147100 Rh2CG148400 Rh2DG147600 |
| rosa_wichuraiana | Rw2G011140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 759 |
| Acc36I | ACCTGC | 1 cut(s) | 652 |
| AccII | CGCG | 1 cut(s) | 675 |
| AciI | CCGC | 2 cut(s) | 673, 904 |
| AclWI | GGATC | 4 cut(s) | 683, 992, 1031, 1375 |
| AcsI | RAATTY | 3 cut(s) | 85, 103, 1087 |
| AdeI | CACNNNGTG | 1 cut(s) | 1256 |
| AfaI | GTAC | 3 cut(s) | 148, 769, 1327 |
| AflIII | ACRYGT | 1 cut(s) | 69 |
| AgsI | TTSAA | 7 cut(s) | 102, 108, 399, 443, 476, 854, 928 |
| AjnI | CCWGG | 2 cut(s) | 43, 1027 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1366, 1398 |
| AluBI | AGCT | 8 cut(s) | 23, 130, 493, 564, 835, 857, 1139, 1246 |
| AluI | AGCT | 8 cut(s) | 23, 130, 493, 564, 835, 857, 1139, 1246 |
| Alw26I | GTCTC | 1 cut(s) | 715 |
| AlwI | GGATC | 4 cut(s) | 683, 992, 1031, 1375 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1034 |
| Ama87I | CYCGRG | 1 cut(s) | 1241 |
| AoxI | GGCC | 3 cut(s) | 213, 283, 381 |
| ApeKI | GCWGC | 8 cut(s) | 480, 829, 832, 1007, 1010, 1307, 1310, 1331 |
| ApoI | RAATTY | 3 cut(s) | 85, 103, 1087 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 52, 1218 |
| AspLEI | GCGC | 2 cut(s) | 279, 760 |
| AspS9I | GGNCC | 1 cut(s) | 284 |
| AsuHPI | GGTGA | 1 cut(s) | 1058 |
| AsuII | TTCGAA | 1 cut(s) | 455 |
| AvaI | CYCGRG | 1 cut(s) | 1241 |
| AxyI | CCTNAGG | 1 cut(s) | 210 |
| BanII | GRGCYC | 1 cut(s) | 1301 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 130, 162, 846, 878 |
| BbsI | GAAGAC | 2 cut(s) | 66, 1285 |
| BbvI | GCAGC | 8 cut(s) | 492, 841, 844, 994, 1022, 1294, 1297, 1343 |
| BccI | CCATC | 5 cut(s) | 719, 883, 1114, 1120, 1126 |
| BceAI | ACGGC | 1 cut(s) | 1268 |
| BciT130I | CCWGG | 2 cut(s) | 45, 1029 |
| BcoDI | GTCTC | 1 cut(s) | 715 |
| BfaI | CTAG | 1 cut(s) | 1074 |
| BfmI | CTRYAG | 4 cut(s) | 993, 1008, 1041, 1329 |
| BfoI | RGCGCY | 1 cut(s) | 280 |
| BfuAI | ACCTGC | 1 cut(s) | 652 |
| BisI | GCNGC | 8 cut(s) | 481, 830, 833, 1008, 1011, 1308, 1311, 1332 |
| BlsI | GCNGC | 8 cut(s) | 482, 831, 834, 1009, 1012, 1309, 1312, 1333 |
| Bme1390I | CCNGG | 2 cut(s) | 45, 1029 |
| BmeT110I | CYCGRG | 1 cut(s) | 1241 |
| BmgT120I | GGNCC | 1 cut(s) | 284 |
| BmiI | GGNNCC | 2 cut(s) | 117, 1026 |
| BmrFI | CCNGG | 2 cut(s) | 45, 1029 |
| BmrI | ACTGGG | 1 cut(s) | 545 |
| BmsI | GCATC | 1 cut(s) | 781 |
| BmuI | ACTGGG | 1 cut(s) | 545 |
| BpiI | GAAGAC | 2 cut(s) | 66, 1285 |
| BpmI | CTGGAG | 2 cut(s) | 152, 639 |
| Bpu14I | TTCGAA | 1 cut(s) | 455 |
| BpuEI | CTTGAG | 2 cut(s) | 281, 697 |
| BsaJI | CCNNGG | 3 cut(s) | 280, 774, 1335 |
| Bse118I | RCCGGY | 1 cut(s) | 112 |
| Bse1I | ACTGG | 3 cut(s) | 540, 765, 943 |
| Bse21I | CCTNAGG | 1 cut(s) | 210 |
| Bse3DI | GCAATG | 1 cut(s) | 490 |
| BseBI | CCWGG | 2 cut(s) | 45, 1029 |
| BseDI | CCNNGG | 3 cut(s) | 280, 774, 1335 |
| BseGI | GGATG | 5 cut(s) | 322, 370, 412, 628, 1240 |
| BseMI | GCAATG | 1 cut(s) | 490 |
| BseMII | CTCAG | 7 cut(s) | 111, 165, 201, 804, 1107, 1154, 1386 |
| BseNI | ACTGG | 3 cut(s) | 540, 765, 943 |
| BseXI | GCAGC | 8 cut(s) | 492, 841, 844, 994, 1022, 1294, 1297, 1343 |
| BseYI | CCCAGC | 1 cut(s) | 740 |
| Bsh1236I | CGCG | 1 cut(s) | 675 |
| BshFI | GGCC | 3 cut(s) | 215, 285, 383 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1241 |
| BsiSI | CCGG | 1 cut(s) | 113 |
| BslFI | GGGAC | 1 cut(s) | 511 |
| BsmAI | GTCTC | 1 cut(s) | 715 |
| BsmFI | GGGAC | 1 cut(s) | 511 |
| BsnI | GGCC | 3 cut(s) | 215, 285, 383 |
| BsoBI | CYCGRG | 1 cut(s) | 1241 |
| Bsp119I | TTCGAA | 1 cut(s) | 455 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1301 |
| Bsp143I | GATC | 4 cut(s) | 688, 997, 1036, 1367 |
| Bsp19I | CCATGG | 1 cut(s) | 774 |
| BspACI | CCGC | 2 cut(s) | 673, 904 |
| BspANI | GGCC | 3 cut(s) | 215, 285, 383 |
| BspCNI | CTCAG | 7 cut(s) | 112, 164, 202, 805, 1108, 1153, 1387 |
| BspFNI | CGCG | 1 cut(s) | 675 |
| BspLI | GGNNCC | 2 cut(s) | 117, 1026 |
| BspMAI | CTGCAG | 4 cut(s) | 997, 1012, 1045, 1333 |
| BspMI | ACCTGC | 1 cut(s) | 652 |
| BspPI | GGATC | 4 cut(s) | 683, 992, 1031, 1375 |
| BspT104I | TTCGAA | 1 cut(s) | 455 |
| BsrDI | GCAATG | 1 cut(s) | 490 |
| BsrFI | RCCGGY | 1 cut(s) | 112 |
| BsrI | ACTGG | 3 cut(s) | 540, 765, 943 |
| BssAI | RCCGGY | 1 cut(s) | 112 |
| BssECI | CCNNGG | 3 cut(s) | 280, 774, 1335 |
| BssMI | GATC | 4 cut(s) | 688, 997, 1036, 1367 |
| BssT1I | CCWWGG | 2 cut(s) | 774, 1335 |
| Bst2UI | CCWGG | 2 cut(s) | 45, 1029 |
| Bst4CI | ACNGT | 3 cut(s) | 16, 146, 403 |
| Bst6I | CTCTTC | 3 cut(s) | 84, 342, 1041 |
| BstBI | TTCGAA | 1 cut(s) | 455 |
| BstC8I | GCNNGC | 4 cut(s) | 192, 912, 1248, 1411 |
| BstDEI | CTNAG | 9 cut(s) | 120, 151, 210, 515, 602, 813, 1116, 1140, 1395 |
| BstDSI | CCRYGG | 1 cut(s) | 774 |
| BstF5I | GGATG | 5 cut(s) | 322, 370, 412, 628, 1240 |
| BstFNI | CGCG | 1 cut(s) | 675 |
| BstH2I | RGCGCY | 1 cut(s) | 280 |
| BstHHI | GCGC | 2 cut(s) | 279, 760 |
| BstKTI | GATC | 4 cut(s) | 691, 1000, 1039, 1370 |
| BstMAI | GTCTC | 1 cut(s) | 715 |
| BstMBI | GATC | 4 cut(s) | 688, 997, 1036, 1367 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 200, 757, 829, 1252, 1337 |
| BstNI | CCWGG | 2 cut(s) | 45, 1029 |
| BstNSI | RCATGY | 1 cut(s) | 73 |
| BstSCI | CCNGG | 2 cut(s) | 43, 1027 |
| BstSFI | CTRYAG | 4 cut(s) | 993, 1008, 1041, 1329 |
| BstUI | CGCG | 1 cut(s) | 675 |
| BstV1I | GCAGC | 8 cut(s) | 492, 841, 844, 994, 1022, 1294, 1297, 1343 |
| BstV2I | GAAGAC | 2 cut(s) | 66, 1285 |
| BstX2I | RGATCY | 1 cut(s) | 997 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 338 |
| BstYI | RGATCY | 1 cut(s) | 997 |
| Bsu36I | CCTNAGG | 1 cut(s) | 210 |
| BsuRI | GGCC | 3 cut(s) | 215, 285, 383 |
| BtgI | CCRYGG | 1 cut(s) | 774 |
| BtgZI | GCGATG | 1 cut(s) | 662 |
| BtsCI | GGATG | 5 cut(s) | 322, 370, 412, 628, 1240 |
| BtsI | GCAGTG | 1 cut(s) | 1002 |
| BtsIMutI | CAGTG | 3 cut(s) | 12, 950, 1002 |
| BveI | ACCTGC | 1 cut(s) | 652 |
| Cac8I | GCNNGC | 4 cut(s) | 192, 912, 1248, 1411 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1034 |
| CfoI | GCGC | 2 cut(s) | 279, 760 |
| Cfr10I | RCCGGY | 1 cut(s) | 112 |
| Cfr13I | GGNCC | 1 cut(s) | 284 |
| CsiI | ACCWGGT | 1 cut(s) | 1027 |
| Csp6I | GTAC | 3 cut(s) | 147, 768, 1326 |
| CviAII | CATG | 7 cut(s) | 70, 569, 703, 775, 824, 866, 1019 |
| CviQI | GTAC | 3 cut(s) | 147, 768, 1326 |
| DdeI | CTNAG | 9 cut(s) | 120, 151, 210, 515, 602, 813, 1116, 1140, 1395 |
| DpnI | GATC | 4 cut(s) | 690, 999, 1038, 1369 |
| DpnII | GATC | 4 cut(s) | 688, 997, 1036, 1367 |
| DraIII | CACNNNGTG | 1 cut(s) | 1256 |
| Eam1104I | CTCTTC | 3 cut(s) | 84, 342, 1041 |
| EarI | CTCTTC | 3 cut(s) | 84, 342, 1041 |
| Eco130I | CCWWGG | 2 cut(s) | 774, 1335 |
| Eco24I | GRGCYC | 1 cut(s) | 1301 |
| Eco81I | CCTNAGG | 1 cut(s) | 210 |
| Eco88I | CYCGRG | 1 cut(s) | 1241 |
| EcoO109I | RGGNCCY | 1 cut(s) | 284 |
| EcoRI | GAATTC | 1 cut(s) | 85 |
| EcoRII | CCWGG | 2 cut(s) | 43, 1027 |
| EcoT14I | CCWWGG | 2 cut(s) | 774, 1335 |
| EcoT38I | GRGCYC | 1 cut(s) | 1301 |
| ErhI | CCWWGG | 2 cut(s) | 774, 1335 |
| FaeI | CATG | 7 cut(s) | 73, 572, 706, 778, 827, 869, 1022 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1053, 1085 |
| FaqI | GGGAC | 1 cut(s) | 511 |
| FatI | CATG | 7 cut(s) | 69, 568, 702, 774, 823, 865, 1018 |
| Fnu4HI | GCNGC | 8 cut(s) | 481, 830, 833, 1008, 1011, 1308, 1311, 1332 |
| FokI | GGATG | 5 cut(s) | 329, 377, 419, 635, 1247 |
| FriOI | GRGCYC | 1 cut(s) | 1301 |
| Fsp4HI | GCNGC | 8 cut(s) | 481, 830, 833, 1008, 1011, 1308, 1311, 1332 |
| FspBI | CTAG | 1 cut(s) | 1074 |
| FspI | TGCGCA | 1 cut(s) | 759 |
| GlaI | GCGC | 2 cut(s) | 278, 759 |
| GluI | GCNGC | 8 cut(s) | 481, 830, 833, 1008, 1011, 1308, 1311, 1332 |
| GsaI | CCCAGC | 1 cut(s) | 744 |
| GsuI | CTGGAG | 2 cut(s) | 152, 639 |
| HaeII | RGCGCY | 1 cut(s) | 280 |
| HaeIII | GGCC | 3 cut(s) | 215, 285, 383 |
| HapII | CCGG | 1 cut(s) | 113 |
| HhaI | GCGC | 2 cut(s) | 279, 760 |
| Hin1II | CATG | 7 cut(s) | 73, 572, 706, 778, 827, 869, 1022 |
| Hin6I | GCGC | 2 cut(s) | 277, 758 |
| HinP1I | GCGC | 2 cut(s) | 277, 758 |
| HincII | GTYRAC | 2 cut(s) | 67, 370 |
| HindII | GTYRAC | 2 cut(s) | 67, 370 |
| HindIII | AAGCTT | 1 cut(s) | 491 |
| HpaI | GTTAAC | 1 cut(s) | 370 |
| HpaII | CCGG | 1 cut(s) | 113 |
| HphI | GGTGA | 1 cut(s) | 1058 |
| Hpy166II | GTNNAC | 5 cut(s) | 67, 370, 770, 1066, 1180 |
| Hpy188I | TCNGA | 9 cut(s) | 84, 310, 616, 814, 847, 1036, 1143, 1224, 1387 |
| Hpy188III | TCNNGA | 8 cut(s) | 119, 209, 298, 656, 1211, 1232, 1241, 1394 |
| Hpy8I | GTNNAC | 5 cut(s) | 67, 370, 770, 1066, 1180 |
| HpyAV | CCTTC | 6 cut(s) | 132, 253, 302, 328, 1092, 1263 |
| HpyCH4III | ACNGT | 3 cut(s) | 16, 146, 403 |
| HpyCH4IV | ACGT | 1 cut(s) | 594 |
| HpyCH4V | TGCA | 7 cut(s) | 377, 448, 995, 1010, 1043, 1331, 1409 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 200, 757, 829, 1252, 1337 |
| HpyF3I | CTNAG | 9 cut(s) | 120, 151, 210, 515, 602, 813, 1116, 1140, 1395 |
| HpySE526I | ACGT | 1 cut(s) | 594 |
| Hsp92II | CATG | 7 cut(s) | 73, 572, 706, 778, 827, 869, 1022 |
| HspAI | GCGC | 2 cut(s) | 277, 758 |
| KspAI | GTTAAC | 1 cut(s) | 370 |
| Kzo9I | GATC | 4 cut(s) | 688, 997, 1036, 1367 |
| Lsp1109I | GCAGC | 8 cut(s) | 492, 841, 844, 994, 1022, 1294, 1297, 1343 |
| LweI | GCATC | 1 cut(s) | 781 |
| MabI | ACCWGGT | 1 cut(s) | 1027 |
| MaeI | CTAG | 1 cut(s) | 1074 |
| MaeII | ACGT | 1 cut(s) | 594 |
| MaeIII | GTNAC | 4 cut(s) | 590, 668, 716, 1256 |
| MalI | GATC | 4 cut(s) | 690, 999, 1038, 1369 |
| MboI | GATC | 4 cut(s) | 688, 997, 1036, 1367 |
| MflI | RGATCY | 1 cut(s) | 997 |
| MhlI | GDGCHC | 1 cut(s) | 1301 |
| MluCI | AATT | 5 cut(s) | 85, 103, 860, 1087, 1192 |
| MlyI | GAGTC | 7 cut(s) | 131, 581, 646, 692, 889, 1157, 1408 |
| MroXI | GAANNNNTTC | 2 cut(s) | 52, 1218 |
| MseI | TTAA | 3 cut(s) | 369, 983, 1316 |
| MslI | CAYNNNNRTG | 1 cut(s) | 456 |
| MspI | CCGG | 1 cut(s) | 113 |
| MspR9I | CCNGG | 2 cut(s) | 45, 1029 |
| MvaI | CCWGG | 2 cut(s) | 45, 1029 |
| MvnI | CGCG | 1 cut(s) | 675 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 200, 757, 829, 1252, 1337 |
| NcoI | CCATGG | 1 cut(s) | 774 |
| NdeII | GATC | 4 cut(s) | 688, 997, 1036, 1367 |
| NlaIII | CATG | 7 cut(s) | 73, 572, 706, 778, 827, 869, 1022 |
| NlaIV | GGNNCC | 2 cut(s) | 117, 1026 |
| NmeAIII | GCCGAG | 1 cut(s) | 305 |
| NmuCI | GTSAC | 2 cut(s) | 668, 1256 |
| NsbI | TGCGCA | 1 cut(s) | 759 |
| NspI | RCATGY | 1 cut(s) | 73 |
| NspV | TTCGAA | 1 cut(s) | 455 |
| PaeR7I | CTCGAG | 1 cut(s) | 1241 |
| PciI | ACATGT | 1 cut(s) | 69 |
| PdmI | GAANNNNTTC | 2 cut(s) | 52, 1218 |
| PfeI | GAWTC | 7 cut(s) | 230, 410, 611, 920, 1207, 1228, 1382 |
| PkrI | GCNGC | 8 cut(s) | 482, 831, 834, 1009, 1012, 1309, 1312, 1333 |
| PleI | GAGTC | 7 cut(s) | 130, 580, 646, 692, 888, 1156, 1407 |
| PpsI | GAGTC | 7 cut(s) | 130, 580, 646, 692, 888, 1156, 1407 |
| PscI | ACATGT | 1 cut(s) | 69 |
| Psp6I | CCWGG | 2 cut(s) | 43, 1027 |
| PspFI | CCCAGC | 1 cut(s) | 740 |
| PspGI | CCWGG | 2 cut(s) | 43, 1027 |
| PspN4I | GGNNCC | 2 cut(s) | 117, 1026 |
| PspPI | GGNCC | 1 cut(s) | 284 |
| PstI | CTGCAG | 4 cut(s) | 997, 1012, 1045, 1333 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1034 |
| PsuI | RGATCY | 1 cut(s) | 997 |
| RsaI | GTAC | 3 cut(s) | 148, 769, 1327 |
| RsaNI | GTAC | 3 cut(s) | 147, 768, 1326 |
| RseI | CAYNNNNRTG | 1 cut(s) | 456 |
| SaqAI | TTAA | 3 cut(s) | 369, 983, 1316 |
| SatI | GCNGC | 8 cut(s) | 481, 830, 833, 1008, 1011, 1308, 1311, 1332 |
| Sau3AI | GATC | 4 cut(s) | 688, 997, 1036, 1367 |
| Sau96I | GGNCC | 1 cut(s) | 284 |
| SchI | GAGTC | 7 cut(s) | 131, 581, 646, 692, 889, 1157, 1408 |
| ScrFI | CCNGG | 2 cut(s) | 45, 1029 |
| SduI | GDGCHC | 1 cut(s) | 1301 |
| SexAI | ACCWGGT | 1 cut(s) | 1027 |
| SfaNI | GCATC | 1 cut(s) | 781 |
| SfcI | CTRYAG | 4 cut(s) | 993, 1008, 1041, 1329 |
| Sfr274I | CTCGAG | 1 cut(s) | 1241 |
| SfuI | TTCGAA | 1 cut(s) | 455 |
| SlaI | CTCGAG | 1 cut(s) | 1241 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 456 |
| SmlI | CTYRAG | 3 cut(s) | 296, 712, 1241 |
| SmoI | CTYRAG | 3 cut(s) | 296, 712, 1241 |
| Sse9I | AATT | 5 cut(s) | 85, 103, 860, 1087, 1192 |
| SsiI | CCGC | 2 cut(s) | 673, 904 |
| SspMI | CTAG | 1 cut(s) | 1074 |
| StyD4I | CCNGG | 2 cut(s) | 43, 1027 |
| StyI | CCWWGG | 2 cut(s) | 774, 1335 |
| TaaI | ACNGT | 3 cut(s) | 16, 146, 403 |
| TaiI | ACGT | 1 cut(s) | 597 |
| TaqI | TCGA | 6 cut(s) | 175, 392, 455, 575, 1242, 1301 |
| TasI | AATT | 5 cut(s) | 85, 103, 860, 1087, 1192 |
| TatI | WGTACW | 1 cut(s) | 767 |
| TfiI | GAWTC | 7 cut(s) | 230, 410, 611, 920, 1207, 1228, 1382 |
| Tru1I | TTAA | 3 cut(s) | 369, 983, 1316 |
| Tru9I | TTAA | 3 cut(s) | 369, 983, 1316 |
| TscAI | CASTG | 3 cut(s) | 19, 950, 1009 |
| TseFI | GTSAC | 2 cut(s) | 668, 1256 |
| TseI | GCWGC | 8 cut(s) | 480, 829, 832, 1007, 1010, 1307, 1310, 1331 |
| Tsp45I | GTSAC | 2 cut(s) | 668, 1256 |
| TspDTI | ATGAA | 6 cut(s) | 161, 360, 455, 798, 882, 1220 |
| TspGWI | ACGGA | 3 cut(s) | 52, 829, 1178 |
| TspRI | CASTG | 3 cut(s) | 19, 950, 1009 |
| XapI | RAATTY | 3 cut(s) | 85, 103, 1087 |
| XceI | RCATGY | 1 cut(s) | 73 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 772 |
| XhoI | CTCGAG | 1 cut(s) | 1241 |
| XmnI | GAANNNNTTC | 2 cut(s) | 52, 1218 |
| XspI | CTAG | 1 cut(s) | 1074 |