Prupe.7G157800_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
16575490 .. 16579833
4344 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G157800.1

Sequence Viewer

Length: 1419 bp
ATGCCGACTTTCACTGTCGTAGCTTTAGATAGGTTATTAGAACCTGGAACTTCTTCCAAATCCGTTGACATGTCTTCTCTTCCGAATTCCAAGCCTATTTCAAATTCAATGCCGGTTCCTGAGTCCAAGCTGGAGAGAAGGAACAGTACCTCAGTTGTGGAGAACAGGCTTCATCGACCTCCAATAAAGCCAGCCCTCTATGCTACTCCTGAGGCCACCCCACTCCCTGATTCGCCTACTTCCTTCCCTCCCTCGCCTTACATCATCAACCACAAGCGCCGAGGCCCTCGCCTTCTCAAGAGTTATTCCGAGCAGGATGTGTCCATACACCAGAAGGCTGGAAATGAAGAGAAACTCAATGGGGATGTTAACAATGCAGAGGCCAAGTTGTCGAGTTCAACTGTGGATGATTCGGCTACTTTTACTTTTCCCAAGCCTGTTGAAGTGCAACATTCGAATGGCTTTCATCATTTTGAAAGCAGCAATGGGAAGCTTGGGACAAGTAATGGGAAACTTAGAAGCAGTAATGTGGAACTGGGTAGCAGTAGTGAGCGTGAAGATAGCTTCCATGAGTCGAAAAAGAGAAGCAGTAACGTGGAACTAAGTAAAGATTCGGATAGGGATGATGATTTGTGGAAGCAACCTGCGATGACTCCAGAAAGAGATAGTGACCGCGAAGATTTCTTTGATCCAAAAGACTCCATGAGTGTCTCAAGTTACACAGATGGAGAGGTAAATGCTGGGGCAGAGCGTTCTGCGCAGACCAGTACACCCATGGGGGAGTTCTATGATGCTTGGGAAGAACTTTCATCTGAGAGTGGGCATGGGCAGCAGCTTTCCGTTTCTGATGTTGAAGCTGAATTACATGAAATGAGATTGAGTCTTTTGATGGAAATAGAGAAGCGGAAGCAAGCAGAAGAATCCTTGAATAACTTGCGAAACCAGTGGCAGAGGATTAGGCAACATTTATCTCTTGTAGGATTAACACTCCCTGCAGATCCCACTGCTGCAGCAGGGCATGAGGAACCAGGTTCTGATCCTGCAGAAGAGTTGTGCCAACAAGTTCACCTTGCTAGGTTTGTATCAAATTCTATTGGAAGGGGCATAATAAGGGCTGAGATGGAGATGGAGATGGAAGCTCAGATTGAGTCAAAGAACTTTGAGATTGCTCGGTTGGTGGACAAACTCCGTAATTATGAGGCTATGAATCAGGAAATGGTTCAGAGGAATCAGGATGTTCTCGAGCTGGCACGGCGTGACAGGGAGAGAAGGGAAAGAAGACAGAGGTGGGTCTGGGGCTCGATTGCTGCTGCCTTAACTCTTGGTACTGCAGCCTTGGCATACTCTTATATCCCGTCTGGTAGGGGATCGCCAAACTACGATTCTGATGTTCCTGAGAGTCATAATGCAGGCAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

473

Amino Acids

52.73

Weight (kDa)

5.3

Isoelectric Point (pI)

57.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 759
Acc36I ACCTGC 1 cut(s) 652
AccII CGCG 1 cut(s) 675
AciI CCGC 2 cut(s) 673, 904
AclWI GGATC 4 cut(s) 683, 992, 1031, 1375
AcsI RAATTY 3 cut(s) 85, 103, 1087
AdeI CACNNNGTG 1 cut(s) 1256
AfaI GTAC 3 cut(s) 148, 769, 1327
AflIII ACRYGT 1 cut(s) 69
AgsI TTSAA 7 cut(s) 102, 108, 399, 443, 476, 854, 928
AjnI CCWGG 2 cut(s) 43, 1027
AjuI GAANNNNNNNTTGG 2 cut(s) 1366, 1398
AluBI AGCT 8 cut(s) 23, 130, 493, 564, 835, 857, 1139, 1246
AluI AGCT 8 cut(s) 23, 130, 493, 564, 835, 857, 1139, 1246
Alw26I GTCTC 1 cut(s) 715
AlwI GGATC 4 cut(s) 683, 992, 1031, 1375
AlwNI CAGNNNCTG 1 cut(s) 1034
Ama87I CYCGRG 1 cut(s) 1241
AoxI GGCC 3 cut(s) 213, 283, 381
ApeKI GCWGC 8 cut(s) 480, 829, 832, 1007, 1010, 1307, 1310, 1331
ApoI RAATTY 3 cut(s) 85, 103, 1087
Asp700I GAANNNNTTC 2 cut(s) 52, 1218
AspLEI GCGC 2 cut(s) 279, 760
AspS9I GGNCC 1 cut(s) 284
AsuHPI GGTGA 1 cut(s) 1058
AsuII TTCGAA 1 cut(s) 455
AvaI CYCGRG 1 cut(s) 1241
AxyI CCTNAGG 1 cut(s) 210
BanII GRGCYC 1 cut(s) 1301
BarI GAAGNNNNNNTAC 4 cut(s) 130, 162, 846, 878
BbsI GAAGAC 2 cut(s) 66, 1285
BbvI GCAGC 8 cut(s) 492, 841, 844, 994, 1022, 1294, 1297, 1343
BccI CCATC 5 cut(s) 719, 883, 1114, 1120, 1126
BceAI ACGGC 1 cut(s) 1268
BciT130I CCWGG 2 cut(s) 45, 1029
BcoDI GTCTC 1 cut(s) 715
BfaI CTAG 1 cut(s) 1074
BfmI CTRYAG 4 cut(s) 993, 1008, 1041, 1329
BfoI RGCGCY 1 cut(s) 280
BfuAI ACCTGC 1 cut(s) 652
BisI GCNGC 8 cut(s) 481, 830, 833, 1008, 1011, 1308, 1311, 1332
BlsI GCNGC 8 cut(s) 482, 831, 834, 1009, 1012, 1309, 1312, 1333
Bme1390I CCNGG 2 cut(s) 45, 1029
BmeT110I CYCGRG 1 cut(s) 1241
BmgT120I GGNCC 1 cut(s) 284
BmiI GGNNCC 2 cut(s) 117, 1026
BmrFI CCNGG 2 cut(s) 45, 1029
BmrI ACTGGG 1 cut(s) 545
BmsI GCATC 1 cut(s) 781
BmuI ACTGGG 1 cut(s) 545
BpiI GAAGAC 2 cut(s) 66, 1285
BpmI CTGGAG 2 cut(s) 152, 639
Bpu14I TTCGAA 1 cut(s) 455
BpuEI CTTGAG 2 cut(s) 281, 697
BsaJI CCNNGG 3 cut(s) 280, 774, 1335
Bse118I RCCGGY 1 cut(s) 112
Bse1I ACTGG 3 cut(s) 540, 765, 943
Bse21I CCTNAGG 1 cut(s) 210
Bse3DI GCAATG 1 cut(s) 490
BseBI CCWGG 2 cut(s) 45, 1029
BseDI CCNNGG 3 cut(s) 280, 774, 1335
BseGI GGATG 5 cut(s) 322, 370, 412, 628, 1240
BseMI GCAATG 1 cut(s) 490
BseMII CTCAG 7 cut(s) 111, 165, 201, 804, 1107, 1154, 1386
BseNI ACTGG 3 cut(s) 540, 765, 943
BseXI GCAGC 8 cut(s) 492, 841, 844, 994, 1022, 1294, 1297, 1343
BseYI CCCAGC 1 cut(s) 740
Bsh1236I CGCG 1 cut(s) 675
BshFI GGCC 3 cut(s) 215, 285, 383
BsiHKCI CYCGRG 1 cut(s) 1241
BsiSI CCGG 1 cut(s) 113
BslFI GGGAC 1 cut(s) 511
BsmAI GTCTC 1 cut(s) 715
BsmFI GGGAC 1 cut(s) 511
BsnI GGCC 3 cut(s) 215, 285, 383
BsoBI CYCGRG 1 cut(s) 1241
Bsp119I TTCGAA 1 cut(s) 455
Bsp1286I GDGCHC 1 cut(s) 1301
Bsp143I GATC 4 cut(s) 688, 997, 1036, 1367
Bsp19I CCATGG 1 cut(s) 774
BspACI CCGC 2 cut(s) 673, 904
BspANI GGCC 3 cut(s) 215, 285, 383
BspCNI CTCAG 7 cut(s) 112, 164, 202, 805, 1108, 1153, 1387
BspFNI CGCG 1 cut(s) 675
BspLI GGNNCC 2 cut(s) 117, 1026
BspMAI CTGCAG 4 cut(s) 997, 1012, 1045, 1333
BspMI ACCTGC 1 cut(s) 652
BspPI GGATC 4 cut(s) 683, 992, 1031, 1375
BspT104I TTCGAA 1 cut(s) 455
BsrDI GCAATG 1 cut(s) 490
BsrFI RCCGGY 1 cut(s) 112
BsrI ACTGG 3 cut(s) 540, 765, 943
BssAI RCCGGY 1 cut(s) 112
BssECI CCNNGG 3 cut(s) 280, 774, 1335
BssMI GATC 4 cut(s) 688, 997, 1036, 1367
BssT1I CCWWGG 2 cut(s) 774, 1335
Bst2UI CCWGG 2 cut(s) 45, 1029
Bst4CI ACNGT 3 cut(s) 16, 146, 403
Bst6I CTCTTC 3 cut(s) 84, 342, 1041
BstBI TTCGAA 1 cut(s) 455
BstC8I GCNNGC 4 cut(s) 192, 912, 1248, 1411
BstDEI CTNAG 9 cut(s) 120, 151, 210, 515, 602, 813, 1116, 1140, 1395
BstDSI CCRYGG 1 cut(s) 774
BstF5I GGATG 5 cut(s) 322, 370, 412, 628, 1240
BstFNI CGCG 1 cut(s) 675
BstH2I RGCGCY 1 cut(s) 280
BstHHI GCGC 2 cut(s) 279, 760
BstKTI GATC 4 cut(s) 691, 1000, 1039, 1370
BstMAI GTCTC 1 cut(s) 715
BstMBI GATC 4 cut(s) 688, 997, 1036, 1367
BstMWI GCNNNNNNNGC 5 cut(s) 200, 757, 829, 1252, 1337
BstNI CCWGG 2 cut(s) 45, 1029
BstNSI RCATGY 1 cut(s) 73
BstSCI CCNGG 2 cut(s) 43, 1027
BstSFI CTRYAG 4 cut(s) 993, 1008, 1041, 1329
BstUI CGCG 1 cut(s) 675
BstV1I GCAGC 8 cut(s) 492, 841, 844, 994, 1022, 1294, 1297, 1343
BstV2I GAAGAC 2 cut(s) 66, 1285
BstX2I RGATCY 1 cut(s) 997
BstXI CCANNNNNNTGG 1 cut(s) 338
BstYI RGATCY 1 cut(s) 997
Bsu36I CCTNAGG 1 cut(s) 210
BsuRI GGCC 3 cut(s) 215, 285, 383
BtgI CCRYGG 1 cut(s) 774
BtgZI GCGATG 1 cut(s) 662
BtsCI GGATG 5 cut(s) 322, 370, 412, 628, 1240
BtsI GCAGTG 1 cut(s) 1002
BtsIMutI CAGTG 3 cut(s) 12, 950, 1002
BveI ACCTGC 1 cut(s) 652
Cac8I GCNNGC 4 cut(s) 192, 912, 1248, 1411
CaiI CAGNNNCTG 1 cut(s) 1034
CfoI GCGC 2 cut(s) 279, 760
Cfr10I RCCGGY 1 cut(s) 112
Cfr13I GGNCC 1 cut(s) 284
CsiI ACCWGGT 1 cut(s) 1027
Csp6I GTAC 3 cut(s) 147, 768, 1326
CviAII CATG 7 cut(s) 70, 569, 703, 775, 824, 866, 1019
CviQI GTAC 3 cut(s) 147, 768, 1326
DdeI CTNAG 9 cut(s) 120, 151, 210, 515, 602, 813, 1116, 1140, 1395
DpnI GATC 4 cut(s) 690, 999, 1038, 1369
DpnII GATC 4 cut(s) 688, 997, 1036, 1367
DraIII CACNNNGTG 1 cut(s) 1256
Eam1104I CTCTTC 3 cut(s) 84, 342, 1041
EarI CTCTTC 3 cut(s) 84, 342, 1041
Eco130I CCWWGG 2 cut(s) 774, 1335
Eco24I GRGCYC 1 cut(s) 1301
Eco81I CCTNAGG 1 cut(s) 210
Eco88I CYCGRG 1 cut(s) 1241
EcoO109I RGGNCCY 1 cut(s) 284
EcoRI GAATTC 1 cut(s) 85
EcoRII CCWGG 2 cut(s) 43, 1027
EcoT14I CCWWGG 2 cut(s) 774, 1335
EcoT38I GRGCYC 1 cut(s) 1301
ErhI CCWWGG 2 cut(s) 774, 1335
FaeI CATG 7 cut(s) 73, 572, 706, 778, 827, 869, 1022
FalI AAGNNNNNCTT 2 cut(s) 1053, 1085
FaqI GGGAC 1 cut(s) 511
FatI CATG 7 cut(s) 69, 568, 702, 774, 823, 865, 1018
Fnu4HI GCNGC 8 cut(s) 481, 830, 833, 1008, 1011, 1308, 1311, 1332
FokI GGATG 5 cut(s) 329, 377, 419, 635, 1247
FriOI GRGCYC 1 cut(s) 1301
Fsp4HI GCNGC 8 cut(s) 481, 830, 833, 1008, 1011, 1308, 1311, 1332
FspBI CTAG 1 cut(s) 1074
FspI TGCGCA 1 cut(s) 759
GlaI GCGC 2 cut(s) 278, 759
GluI GCNGC 8 cut(s) 481, 830, 833, 1008, 1011, 1308, 1311, 1332
GsaI CCCAGC 1 cut(s) 744
GsuI CTGGAG 2 cut(s) 152, 639
HaeII RGCGCY 1 cut(s) 280
HaeIII GGCC 3 cut(s) 215, 285, 383
HapII CCGG 1 cut(s) 113
HhaI GCGC 2 cut(s) 279, 760
Hin1II CATG 7 cut(s) 73, 572, 706, 778, 827, 869, 1022
Hin6I GCGC 2 cut(s) 277, 758
HinP1I GCGC 2 cut(s) 277, 758
HincII GTYRAC 2 cut(s) 67, 370
HindII GTYRAC 2 cut(s) 67, 370
HindIII AAGCTT 1 cut(s) 491
HpaI GTTAAC 1 cut(s) 370
HpaII CCGG 1 cut(s) 113
HphI GGTGA 1 cut(s) 1058
Hpy166II GTNNAC 5 cut(s) 67, 370, 770, 1066, 1180
Hpy188I TCNGA 9 cut(s) 84, 310, 616, 814, 847, 1036, 1143, 1224, 1387
Hpy188III TCNNGA 8 cut(s) 119, 209, 298, 656, 1211, 1232, 1241, 1394
Hpy8I GTNNAC 5 cut(s) 67, 370, 770, 1066, 1180
HpyAV CCTTC 6 cut(s) 132, 253, 302, 328, 1092, 1263
HpyCH4III ACNGT 3 cut(s) 16, 146, 403
HpyCH4IV ACGT 1 cut(s) 594
HpyCH4V TGCA 7 cut(s) 377, 448, 995, 1010, 1043, 1331, 1409
HpyF10VI GCNNNNNNNGC 5 cut(s) 200, 757, 829, 1252, 1337
HpyF3I CTNAG 9 cut(s) 120, 151, 210, 515, 602, 813, 1116, 1140, 1395
HpySE526I ACGT 1 cut(s) 594
Hsp92II CATG 7 cut(s) 73, 572, 706, 778, 827, 869, 1022
HspAI GCGC 2 cut(s) 277, 758
KspAI GTTAAC 1 cut(s) 370
Kzo9I GATC 4 cut(s) 688, 997, 1036, 1367
Lsp1109I GCAGC 8 cut(s) 492, 841, 844, 994, 1022, 1294, 1297, 1343
LweI GCATC 1 cut(s) 781
MabI ACCWGGT 1 cut(s) 1027
MaeI CTAG 1 cut(s) 1074
MaeII ACGT 1 cut(s) 594
MaeIII GTNAC 4 cut(s) 590, 668, 716, 1256
MalI GATC 4 cut(s) 690, 999, 1038, 1369
MboI GATC 4 cut(s) 688, 997, 1036, 1367
MflI RGATCY 1 cut(s) 997
MhlI GDGCHC 1 cut(s) 1301
MluCI AATT 5 cut(s) 85, 103, 860, 1087, 1192
MlyI GAGTC 7 cut(s) 131, 581, 646, 692, 889, 1157, 1408
MroXI GAANNNNTTC 2 cut(s) 52, 1218
MseI TTAA 3 cut(s) 369, 983, 1316
MslI CAYNNNNRTG 1 cut(s) 456
MspI CCGG 1 cut(s) 113
MspR9I CCNGG 2 cut(s) 45, 1029
MvaI CCWGG 2 cut(s) 45, 1029
MvnI CGCG 1 cut(s) 675
MwoI GCNNNNNNNGC 5 cut(s) 200, 757, 829, 1252, 1337
NcoI CCATGG 1 cut(s) 774
NdeII GATC 4 cut(s) 688, 997, 1036, 1367
NlaIII CATG 7 cut(s) 73, 572, 706, 778, 827, 869, 1022
NlaIV GGNNCC 2 cut(s) 117, 1026
NmeAIII GCCGAG 1 cut(s) 305
NmuCI GTSAC 2 cut(s) 668, 1256
NsbI TGCGCA 1 cut(s) 759
NspI RCATGY 1 cut(s) 73
NspV TTCGAA 1 cut(s) 455
PaeR7I CTCGAG 1 cut(s) 1241
PciI ACATGT 1 cut(s) 69
PdmI GAANNNNTTC 2 cut(s) 52, 1218
PfeI GAWTC 7 cut(s) 230, 410, 611, 920, 1207, 1228, 1382
PkrI GCNGC 8 cut(s) 482, 831, 834, 1009, 1012, 1309, 1312, 1333
PleI GAGTC 7 cut(s) 130, 580, 646, 692, 888, 1156, 1407
PpsI GAGTC 7 cut(s) 130, 580, 646, 692, 888, 1156, 1407
PscI ACATGT 1 cut(s) 69
Psp6I CCWGG 2 cut(s) 43, 1027
PspFI CCCAGC 1 cut(s) 740
PspGI CCWGG 2 cut(s) 43, 1027
PspN4I GGNNCC 2 cut(s) 117, 1026
PspPI GGNCC 1 cut(s) 284
PstI CTGCAG 4 cut(s) 997, 1012, 1045, 1333
PstNI CAGNNNCTG 1 cut(s) 1034
PsuI RGATCY 1 cut(s) 997
RsaI GTAC 3 cut(s) 148, 769, 1327
RsaNI GTAC 3 cut(s) 147, 768, 1326
RseI CAYNNNNRTG 1 cut(s) 456
SaqAI TTAA 3 cut(s) 369, 983, 1316
SatI GCNGC 8 cut(s) 481, 830, 833, 1008, 1011, 1308, 1311, 1332
Sau3AI GATC 4 cut(s) 688, 997, 1036, 1367
Sau96I GGNCC 1 cut(s) 284
SchI GAGTC 7 cut(s) 131, 581, 646, 692, 889, 1157, 1408
ScrFI CCNGG 2 cut(s) 45, 1029
SduI GDGCHC 1 cut(s) 1301
SexAI ACCWGGT 1 cut(s) 1027
SfaNI GCATC 1 cut(s) 781
SfcI CTRYAG 4 cut(s) 993, 1008, 1041, 1329
Sfr274I CTCGAG 1 cut(s) 1241
SfuI TTCGAA 1 cut(s) 455
SlaI CTCGAG 1 cut(s) 1241
SmiMI CAYNNNNRTG 1 cut(s) 456
SmlI CTYRAG 3 cut(s) 296, 712, 1241
SmoI CTYRAG 3 cut(s) 296, 712, 1241
Sse9I AATT 5 cut(s) 85, 103, 860, 1087, 1192
SsiI CCGC 2 cut(s) 673, 904
SspMI CTAG 1 cut(s) 1074
StyD4I CCNGG 2 cut(s) 43, 1027
StyI CCWWGG 2 cut(s) 774, 1335
TaaI ACNGT 3 cut(s) 16, 146, 403
TaiI ACGT 1 cut(s) 597
TaqI TCGA 6 cut(s) 175, 392, 455, 575, 1242, 1301
TasI AATT 5 cut(s) 85, 103, 860, 1087, 1192
TatI WGTACW 1 cut(s) 767
TfiI GAWTC 7 cut(s) 230, 410, 611, 920, 1207, 1228, 1382
Tru1I TTAA 3 cut(s) 369, 983, 1316
Tru9I TTAA 3 cut(s) 369, 983, 1316
TscAI CASTG 3 cut(s) 19, 950, 1009
TseFI GTSAC 2 cut(s) 668, 1256
TseI GCWGC 8 cut(s) 480, 829, 832, 1007, 1010, 1307, 1310, 1331
Tsp45I GTSAC 2 cut(s) 668, 1256
TspDTI ATGAA 6 cut(s) 161, 360, 455, 798, 882, 1220
TspGWI ACGGA 3 cut(s) 52, 829, 1178
TspRI CASTG 3 cut(s) 19, 950, 1009
XapI RAATTY 3 cut(s) 85, 103, 1087
XceI RCATGY 1 cut(s) 73
XcmI CCANNNNNNNNNTGG 1 cut(s) 772
XhoI CTCGAG 1 cut(s) 1241
XmnI GAANNNNTTC 2 cut(s) 52, 1218
XspI CTAG 1 cut(s) 1074
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.