Rorug02G0094800

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0010423
Physical Location & Seq
Reverse (-)
7758311 .. 7761152
2842 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0094800.1

Sequence Viewer

Length: 2043 bp
ATGGTCGCTGTTCGCTGCCGCCTCCCCTTCCTCTTCCTCCTCCTCTTCTTCTTTACCTTCTCCCCTTACCTCTCGCTTTCCTTGTCCGAGGAGGAAGCCTTGCTTAAGCTCAAGGCATCCTTCACCAACTCTACGGCCTTGGCCAACTGGGTTCCCATCCCGGGTTCCTCCCCATGCAAATGGGCCGGCGTCTACTGCACTAAGGGCGGCATCGTCCAGGGTCTTCATCTCCAGAAAATGGGCCTTTCTGGAACAATCAACATCGAAGCCTTGACCCAACTCAAGGGCATCCGAGCCCTTAGCTTTGACGACAACAACTTCGCGGGAAGTATCCCCGACTTCCACACACTTGGAGCTCTCAAGTCTCTGTCAATAACCAACAACAATTTCTCCGGCGAAATCCCAAAAGATTTCTTTGCCGAAATGAACTCGTTAAAGAAAGTTTACCTCTCGAAAAACAAGTTCTCCGGCAAAATCCCGGAATCGCTGACCAAGTTGAAATATCTGATGGAGCTTCATCTCGAGAACAACCAGTTCTCCGGGGCCATCCCGGAATCGCTGACCGAGTTGAAAAATCTGACGCAGCTTCATCTCGAGAACAACCAAATCTCCGGAGCCATCCCTGACTTTAAAGAGGGATCTCTAAAAGATCTAGATTTGTCTAATAACAAGCTCAAGGGTGCAATCCCGGATGACATGTCCAGATATGGTCCTAAGATATTTGCCGGAAACGAAGGACTTTGCGGCGGACCACTCAAGAAGCCATGTGATAATGCACCTACACCGTCACCGTCACCGTCACCGTCACCACCAGAACAGCCAAAACCTCATGCAGGAAAAACAAACCAATCATCGTCCGACACCATCAAGATAGTAGTCGGGGTGATTGTTGGCGTGGTGGTTATGCTGTTGCTGATGATGATAATTAGATATAAGAGGCGACGGAGGGAGGAGAATTTTAGTGTTCTTGGCAAGGAAAACATGGAGGAGCATGTACCTCAACACCATGGGGAGGTGGTTGAAGTTCATGTGCCAAGCTCAAATAGCAGAAGTGTAGGTAGCACTTCTGCGCAGGCCGCGGCGTTGAGGTCGGCCAGTAGCAAGAAATCTGGGGATTCCAAGAAGGGTTCTCATAGCGGGAAGAATGCAGGGAATAATGAGTTGTTGATGGTGAATGACCAGAGAGGCACGTTTGGGTTGCCAGATTTGATGAAAGCCGCGGCGGAGGTTTTGGGGAATGGAGGATTGGGGTCAGCTTACAAGGCTGTGATGGGTAATGGGTTGTCTGTGGTAGTGAAGAGAATGAGGGACATGAATAGATTGGGGAGAGATGGGTTTGATGCTGAGATGAGAAGGTTTGGAAGATTGAAGCATAGGAATATCTTGACTCCCTTGGCTTACCATTATAGGAGAGAAGAGAAGCTGTTGATTTCAGACTACATTCCTAAAGGCAGCTTGTTATATGTTTTGCATGGTGATCGAGGAACTTCTCATTCGGAGCTGACCTGGCCTACCCGTTTGAGAATTATCCAAGGAGTTGCGAAAGGGATGAAGTTTCTGCATACTGAGTTTGCAGCCTATGATTTGCCCCATGGAAATCTCAAGTCTAGCAATATTCTTTTAGACAAAGATTATGAGCCAATTCTTAATGACTATGCTTTTCATCCACTAATCAACCCCAGCAATGCTGCACAAACAATGTTTGCTTTTAAGACCCCAGAGTACATAGAATCCCAGCAAATATCTCCAAAATCTGATGTTTATTGTCTTGGAATAGTCATTCTTGAAATCCTTACTGGAAAGTTCCCGTCTCAATATTTAAGCAATGGCAAAGGTGGGATTGATGTGGTTCAATGGGTGCAGTCAGCAATGGCCGAGCAGAGAGAGCAAGAGCTGCTAGACCCGGAGATTGAAACCAATACAGAATCAGCGAACCAGATGCTGCAGCTTCTCCAAATCGGAGCTGATTGCACTGAGAGTAAACCTGATCGAAGACCTGATATAAGGGAGGCCATTAGGAGGATACTCGAGGTACAAGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

680

Amino Acids

75.0

Weight (kDa)

8.84

Isoelectric Point (pI)

39.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 29 - 67 3.2e-10 Leucine rich repeat N-terminal domain
LRR_8 PF13855 120 - 179 2.8e-08 Leucine rich repeat
LRR_8 PF13855 144 - 203 9.4e-08 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 408 - 673 2.3e-25 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 409 - 672 1.9e-25 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1071
AccB7I CCANNNNNTGG 1 cut(s) 238
AccI GTMKAC 1 cut(s) 192
AccII CGCG 3 cut(s) 323, 1079, 1220
AccIII TCCGGA 1 cut(s) 611
AclWI GGATC 1 cut(s) 646
AcoI YGGCCR 3 cut(s) 141, 1092, 1872
AcsI RAATTY 1 cut(s) 955
AcyI GRCGYC 1 cut(s) 189
AfaI GTAC 3 cut(s) 996, 1724, 2034
AfiI CCNNNNNNNGG 6 cut(s) 161, 238, 283, 833, 1012, 2019
AflII CTTAAG 1 cut(s) 104
AflIII ACRYGT 1 cut(s) 696
AgsI TTSAA 7 cut(s) 499, 571, 1022, 1369, 1787, 1853, 1913
AjnI CCWGG 2 cut(s) 216, 1505
AjuI GAANNNNNNNTTGG 4 cut(s) 371, 403, 1229, 1261
Alw21I GWGCWC 1 cut(s) 358
Alw26I GTCTC 2 cut(s) 369, 1815
AlwI GGATC 1 cut(s) 646
AlwNI CAGNNNCTG 1 cut(s) 1942
Ama87I CYCGRG 4 cut(s) 160, 521, 593, 2027
Aor13HI TCCGGA 1 cut(s) 611
ApeKI GCWGC 8 cut(s) 15, 583, 1452, 1574, 1688, 1894, 1942, 1945
ApoI RAATTY 1 cut(s) 955
ArsI GACNNNNNNTTYG 2 cut(s) 302, 334
AspLEI GCGC 1 cut(s) 1072
AspS9I GGNCC 5 cut(s) 183, 241, 543, 710, 749
AsuC2I CCSGG 7 cut(s) 161, 162, 479, 541, 551, 689, 1904
AsuHPI GGTGA 8 cut(s) 115, 780, 786, 792, 798, 895, 1183, 1487
AvaI CYCGRG 4 cut(s) 160, 521, 593, 2027
AvaII GGWCC 2 cut(s) 710, 749
BalI TGGCCA 1 cut(s) 143
BanII GRGCYC 2 cut(s) 298, 358
BbsI GAAGAC 2 cut(s) 215, 1999
Bbv12I GWGCWC 1 cut(s) 358
BbvI GCAGC 8 cut(s) 2, 595, 1464, 1586, 1675, 1881, 1929, 1957
BccI CCATC 8 cut(s) 164, 502, 554, 626, 872, 1162, 1264, 1325
BceAI ACGGC 1 cut(s) 150
BcgI CGANNNNNNTGC 4 cut(s) 1460, 1494, 1921, 1955
BciT130I CCWGG 2 cut(s) 218, 1507
BciVI GTATCC 2 cut(s) 341, 2016
BcnI CCSGG 7 cut(s) 161, 162, 479, 541, 551, 689, 1904
BcoDI GTCTC 2 cut(s) 369, 1815
BfaI CTAG 3 cut(s) 653, 1608, 1898
BfmI CTRYAG 1 cut(s) 1943
BfrI CTTAAG 1 cut(s) 104
BfuI GTATCC 2 cut(s) 341, 2016
BglII AGATCT 1 cut(s) 649
Bme1390I CCNGG 9 cut(s) 161, 162, 218, 479, 541, 551, 689, 1507, 1904
Bme18I GGWCC 2 cut(s) 710, 749
BmeT110I CYCGRG 4 cut(s) 160, 521, 593, 2027
BmgT120I GGNCC 5 cut(s) 183, 241, 543, 710, 749
BmiI GGNNCC 4 cut(s) 153, 166, 544, 616
BmrFI CCNGG 9 cut(s) 161, 162, 218, 479, 541, 551, 689, 1507, 1904
BmrI ACTGGG 1 cut(s) 157
BmsI GCATC 5 cut(s) 125, 219, 297, 1330, 1929
BmuI ACTGGG 1 cut(s) 157
BpiI GAAGAC 2 cut(s) 215, 1999
BpmI CTGGAG 1 cut(s) 215
Bpu10I CCTNAGC 1 cut(s) 299
BpuEI CTTGAG 6 cut(s) 95, 266, 344, 659, 740, 1586
BpuMI CCSGG 7 cut(s) 161, 162, 479, 541, 551, 689, 1904
BsaHI GRCGYC 1 cut(s) 189
BsaWI WCCGGW 1 cut(s) 611
BsaXI ACNNNNNCTCC 8 cut(s) 374, 404, 449, 479, 521, 551, 593, 623
Bsc4I CCNNNNNNNGG 6 cut(s) 161, 238, 283, 833, 1012, 2019
Bse118I RCCGGY 1 cut(s) 185
Bse1I ACTGG 4 cut(s) 152, 532, 1095, 1801
Bse3DI GCAATG 3 cut(s) 1690, 1831, 1875
BseAI TCCGGA 1 cut(s) 611
BseBI CCWGG 2 cut(s) 218, 1507
BseGI GGATG 8 cut(s) 116, 156, 288, 546, 618, 697, 1554, 1663
BseLI CCNNNNNNNGG 6 cut(s) 161, 238, 283, 833, 1012, 2019
BseMI GCAATG 3 cut(s) 1690, 1831, 1875
BseMII CTCAG 3 cut(s) 1335, 1557, 1965
BseNI ACTGG 4 cut(s) 152, 532, 1095, 1801
BseRI GAGGAG 5 cut(s) 29, 32, 104, 965, 1001
BseXI GCAGC 8 cut(s) 2, 595, 1464, 1586, 1675, 1881, 1929, 1957
BseYI CCCAGC 2 cut(s) 1679, 1734
BsgI GTGCAG 3 cut(s) 181, 1674, 1880
Bsh1236I CGCG 3 cut(s) 323, 1079, 1220
BsiHKAI GWGCWC 1 cut(s) 358
BsiHKCI CYCGRG 4 cut(s) 160, 521, 593, 2027
BslFI GGGAC 1 cut(s) 1322
BslI CCNNNNNNNGG 6 cut(s) 161, 238, 283, 833, 1012, 2019
BsmAI GTCTC 2 cut(s) 369, 1815
BsmBI CGTCTC 1 cut(s) 1815
BsmFI GGGAC 1 cut(s) 1322
BsmI GAATGC 1 cut(s) 1150
BsoBI CYCGRG 4 cut(s) 160, 521, 593, 2027
Bsp1286I GDGCHC 2 cut(s) 298, 358
Bsp13I TCCGGA 1 cut(s) 611
Bsp143I GATC 4 cut(s) 638, 649, 1477, 1987
Bsp19I CCATGG 2 cut(s) 1006, 1591
BspCNI CTCAG 3 cut(s) 1336, 1558, 1966
BspEI TCCGGA 1 cut(s) 611
BspFNI CGCG 3 cut(s) 323, 1079, 1220
BspLI GGNNCC 4 cut(s) 153, 166, 544, 616
BspMAI CTGCAG 1 cut(s) 1947
BspPI GGATC 1 cut(s) 646
BspTI CTTAAG 1 cut(s) 104
BsrDI GCAATG 3 cut(s) 1690, 1831, 1875
BsrFI RCCGGY 1 cut(s) 185
BsrI ACTGG 4 cut(s) 152, 532, 1095, 1801
BssAI RCCGGY 1 cut(s) 185
BssMI GATC 4 cut(s) 638, 649, 1477, 1987
BssNI GRCGYC 1 cut(s) 189
BssT1I CCWWGG 5 cut(s) 138, 1006, 1392, 1531, 1591
Bst2UI CCWGG 2 cut(s) 218, 1507
Bst4CI ACNGT 4 cut(s) 786, 792, 798, 804
Bst6I CTCTTC 4 cut(s) 38, 50, 1292, 1410
BstACI GRCGYC 1 cut(s) 189
BstAFI CTTAAG 1 cut(s) 104
BstAPI GCANNNNNTGC 1 cut(s) 1894
BstC8I GCNNGC 2 cut(s) 187, 1074
BstDEI CTNAG 6 cut(s) 201, 299, 714, 1344, 1566, 1974
BstDSI CCRYGG 4 cut(s) 1006, 1077, 1218, 1591
BstENI CCTNNNNNAGG 1 cut(s) 831
BstF5I GGATG 8 cut(s) 116, 156, 288, 546, 618, 697, 1554, 1663
BstFNI CGCG 3 cut(s) 323, 1079, 1220
BstHHI GCGC 1 cut(s) 1072
BstKTI GATC 4 cut(s) 641, 652, 1480, 1990
BstMAI GTCTC 2 cut(s) 369, 1815
BstMBI GATC 4 cut(s) 638, 649, 1477, 1987
BstMWI GCNNNNNNNGC 8 cut(s) 195, 204, 1044, 1076, 1262, 1507, 1885, 1894
BstNI CCWGG 2 cut(s) 218, 1507
BstNSI RCATGY 2 cut(s) 700, 995
BstSCI CCNGG 9 cut(s) 159, 160, 216, 477, 539, 549, 687, 1505, 1902
BstSFI CTRYAG 1 cut(s) 1943
BstUI CGCG 3 cut(s) 323, 1079, 1220
BstV1I GCAGC 8 cut(s) 2, 595, 1464, 1586, 1675, 1881, 1929, 1957
BstV2I GAAGAC 2 cut(s) 215, 1999
BstX2I RGATCY 2 cut(s) 638, 649
BstXI CCANNNNNNTGG 2 cut(s) 180, 350
BstYI RGATCY 2 cut(s) 638, 649
BsuI GTATCC 2 cut(s) 341, 2016
BtgI CCRYGG 4 cut(s) 1006, 1077, 1218, 1591
BtsCI GGATG 8 cut(s) 116, 156, 288, 546, 618, 697, 1554, 1663
BtsIMutI CAGTG 1 cut(s) 1971
Cac8I GCNNGC 2 cut(s) 187, 1074
CaiI CAGNNNCTG 1 cut(s) 1942
CfoI GCGC 1 cut(s) 1072
Cfr10I RCCGGY 1 cut(s) 185
Cfr13I GGNCC 5 cut(s) 183, 241, 543, 710, 749
Cfr42I CCGCGG 2 cut(s) 1080, 1221
Cfr9I CCCGGG 1 cut(s) 160
CseI GACGC 2 cut(s) 178, 589
Csp6I GTAC 3 cut(s) 995, 1723, 2033
CviQI GTAC 3 cut(s) 995, 1723, 2033
DdeI CTNAG 6 cut(s) 201, 299, 714, 1344, 1566, 1974
DpnI GATC 4 cut(s) 640, 651, 1479, 1989
DpnII GATC 4 cut(s) 638, 649, 1477, 1987
DraI TTTAAA 1 cut(s) 631
EaeI YGGCCR 3 cut(s) 141, 1092, 1872
Eam1104I CTCTTC 4 cut(s) 38, 50, 1292, 1410
EarI CTCTTC 4 cut(s) 38, 50, 1292, 1410
EciI GGCGGA 2 cut(s) 762, 1238
Ecl136II GAGCTC 1 cut(s) 356
Eco130I CCWWGG 5 cut(s) 138, 1006, 1392, 1531, 1591
Eco24I GRGCYC 2 cut(s) 298, 358
Eco47I GGWCC 2 cut(s) 710, 749
Eco53kI GAGCTC 1 cut(s) 356
Eco88I CYCGRG 4 cut(s) 160, 521, 593, 2027
EcoICRI GAGCTC 1 cut(s) 356
EcoNI CCTNNNNNAGG 1 cut(s) 831
EcoRII CCWGG 2 cut(s) 216, 1505
EcoT14I CCWWGG 5 cut(s) 138, 1006, 1392, 1531, 1591
EcoT38I GRGCYC 2 cut(s) 298, 358
ErhI CCWWGG 5 cut(s) 138, 1006, 1392, 1531, 1591
Esp3I CGTCTC 1 cut(s) 1815
FalI AAGNNNNNCTT 4 cut(s) 87, 119, 104, 136
FaqI GGGAC 1 cut(s) 1322
FauI CCCGC 2 cut(s) 316, 1130
FblI GTMKAC 1 cut(s) 192
FokI GGATG 8 cut(s) 103, 143, 275, 533, 605, 704, 1561, 1650
FriOI GRGCYC 2 cut(s) 298, 358
FspBI CTAG 3 cut(s) 653, 1608, 1898
FspI TGCGCA 1 cut(s) 1071
GlaI GCGC 1 cut(s) 1071
GsaI CCCAGC 2 cut(s) 1683, 1738
GsuI CTGGAG 1 cut(s) 215
HgaI GACGC 2 cut(s) 178, 589
HhaI GCGC 1 cut(s) 1072
Hin1I GRCGYC 1 cut(s) 189
Hin6I GCGC 1 cut(s) 1070
HinP1I GCGC 1 cut(s) 1070
HinfI GANTC 6 cut(s) 482, 554, 1115, 1387, 1730, 1925
HphI GGTGA 8 cut(s) 115, 780, 786, 792, 798, 895, 1183, 1487
Hpy166II GTNNAC 3 cut(s) 193, 445, 1982
Hpy188I TCNGA 9 cut(s) 88, 293, 507, 579, 859, 1435, 1498, 1756, 1961
Hpy8I GTNNAC 3 cut(s) 193, 445, 1982
Hpy99I CGWCG 1 cut(s) 945
HpyAV CCTTC 6 cut(s) 37, 67, 130, 728, 1117, 1347
HpyCH4III ACNGT 4 cut(s) 786, 792, 798, 804
HpyCH4IV ACGT 1 cut(s) 1190
HpyF10VI GCNNNNNNNGC 8 cut(s) 195, 204, 1044, 1076, 1262, 1507, 1885, 1894
HpyF3I CTNAG 6 cut(s) 201, 299, 714, 1344, 1566, 1974
HpySE526I ACGT 1 cut(s) 1190
Hsp92I GRCGYC 1 cut(s) 189
HspAI GCGC 1 cut(s) 1070
Kpn2I TCCGGA 1 cut(s) 611
KroI GCCGGC 1 cut(s) 185
KroNI GCCGGC 1 cut(s) 187
KspI CCGCGG 2 cut(s) 1080, 1221
Kzo9I GATC 4 cut(s) 638, 649, 1477, 1987
LmnI GCTCC 6 cut(s) 353, 511, 614, 988, 1498, 1961
Lsp1109I GCAGC 8 cut(s) 2, 595, 1464, 1586, 1675, 1881, 1929, 1957
LweI GCATC 5 cut(s) 125, 219, 297, 1330, 1929
MaeI CTAG 3 cut(s) 653, 1608, 1898
MaeII ACGT 1 cut(s) 1190
MaeIII GTNAC 4 cut(s) 786, 792, 798, 804
MalI GATC 4 cut(s) 640, 651, 1479, 1989
MboI GATC 4 cut(s) 638, 649, 1477, 1987
MboII GAAGA 9 cut(s) 25, 37, 40, 215, 1153, 1309, 1374, 1427, 2004
MflI RGATCY 2 cut(s) 638, 649
MhlI GDGCHC 2 cut(s) 298, 358
MlsI TGGCCA 1 cut(s) 143
MluCI AATT 5 cut(s) 385, 924, 955, 1524, 1641
MluNI TGGCCA 1 cut(s) 143
MlyI GAGTC 1 cut(s) 1381
MmeI TCCRAC 1 cut(s) 882
Mox20I TGGCCA 1 cut(s) 143
MroI TCCGGA 1 cut(s) 611
MroNI GCCGGC 1 cut(s) 185
MscI TGGCCA 1 cut(s) 143
MseI TTAA 6 cut(s) 105, 434, 630, 1647, 1710, 1820
MslI CAYNNNNRTG 1 cut(s) 178
Msp20I TGGCCA 1 cut(s) 143
MspA1I CMGCKG 2 cut(s) 1079, 1220
MspCI CTTAAG 1 cut(s) 104
MspR9I CCNGG 9 cut(s) 161, 162, 218, 479, 541, 551, 689, 1507, 1904
Mva1269I GAATGC 1 cut(s) 1150
MvaI CCWGG 2 cut(s) 218, 1507
MvnI CGCG 3 cut(s) 323, 1079, 1220
MwoI GCNNNNNNNGC 8 cut(s) 195, 204, 1044, 1076, 1262, 1507, 1885, 1894
NaeI GCCGGC 1 cut(s) 187
NciI CCSGG 7 cut(s) 161, 162, 479, 541, 551, 689, 1904
NcoI CCATGG 2 cut(s) 1006, 1591
NdeII GATC 4 cut(s) 638, 649, 1477, 1987
NgoMIV GCCGGC 1 cut(s) 185
NlaIV GGNNCC 4 cut(s) 153, 166, 544, 616
NmeAIII GCCGAG 1 cut(s) 1900
NmuCI GTSAC 4 cut(s) 786, 792, 798, 804
NsbI TGCGCA 1 cut(s) 1071
NspI RCATGY 2 cut(s) 700, 995
PaeR7I CTCGAG 3 cut(s) 521, 593, 2027
PciI ACATGT 1 cut(s) 696
PctI GAATGC 1 cut(s) 1150
PdiI GCCGGC 1 cut(s) 187
PfeI GAWTC 5 cut(s) 482, 554, 1115, 1730, 1925
PflMI CCANNNNNTGG 1 cut(s) 238
PfoI TCCNGGA 3 cut(s) 477, 549, 687
PleI GAGTC 1 cut(s) 1381
PpsI GAGTC 1 cut(s) 1381
PscI ACATGT 1 cut(s) 696
Psp124BI GAGCTC 1 cut(s) 358
Psp6I CCWGG 2 cut(s) 216, 1505
PspFI CCCAGC 2 cut(s) 1679, 1734
PspGI CCWGG 2 cut(s) 216, 1505
PspN4I GGNNCC 4 cut(s) 153, 166, 544, 616
PspPI GGNCC 5 cut(s) 183, 241, 543, 710, 749
PspXI VCTCGAGB 1 cut(s) 2027
PstI CTGCAG 1 cut(s) 1947
PstNI CAGNNNCTG 1 cut(s) 1942
PsuI RGATCY 2 cut(s) 638, 649
RsaI GTAC 3 cut(s) 996, 1724, 2034
RsaNI GTAC 3 cut(s) 995, 1723, 2033
RseI CAYNNNNRTG 1 cut(s) 178
SacI GAGCTC 1 cut(s) 358
SacII CCGCGG 2 cut(s) 1080, 1221
SaqAI TTAA 6 cut(s) 105, 434, 630, 1647, 1710, 1820
Sau3AI GATC 4 cut(s) 638, 649, 1477, 1987
Sau96I GGNCC 5 cut(s) 183, 241, 543, 710, 749
SchI GAGTC 1 cut(s) 1381
ScrFI CCNGG 9 cut(s) 161, 162, 218, 479, 541, 551, 689, 1507, 1904
SduI GDGCHC 2 cut(s) 298, 358
SfaNI GCATC 5 cut(s) 125, 219, 297, 1330, 1929
SfcI CTRYAG 1 cut(s) 1943
Sfr274I CTCGAG 3 cut(s) 521, 593, 2027
Sfr303I CCGCGG 2 cut(s) 1080, 1221
SgrBI CCGCGG 2 cut(s) 1080, 1221
SinI GGWCC 2 cut(s) 710, 749
SlaI CTCGAG 3 cut(s) 521, 593, 2027
SmaI CCCGGG 1 cut(s) 162
SmiMI CAYNNNNRTG 1 cut(s) 178
Sse9I AATT 5 cut(s) 385, 924, 955, 1524, 1641
SspI AATATT 2 cut(s) 1615, 1817
SspMI CTAG 3 cut(s) 653, 1608, 1898
SstI GAGCTC 1 cut(s) 358
StyD4I CCNGG 9 cut(s) 159, 160, 216, 477, 539, 549, 687, 1505, 1902
StyI CCWWGG 5 cut(s) 138, 1006, 1392, 1531, 1591
TaaI ACNGT 4 cut(s) 786, 792, 798, 804
TaiI ACGT 1 cut(s) 1193
TaqI TCGA 7 cut(s) 264, 452, 522, 594, 1480, 1990, 2028
TaqII GACCGA 1 cut(s) 578
TasI AATT 5 cut(s) 385, 924, 955, 1524, 1641
TatI WGTACW 1 cut(s) 1722
TauI GCSGC 7 cut(s) 21, 210, 747, 1079, 1082, 1220, 1223
TfiI GAWTC 5 cut(s) 482, 554, 1115, 1730, 1925
Tru1I TTAA 6 cut(s) 105, 434, 630, 1647, 1710, 1820
Tru9I TTAA 6 cut(s) 105, 434, 630, 1647, 1710, 1820
TscAI CASTG 1 cut(s) 1978
TseFI GTSAC 4 cut(s) 786, 792, 798, 804
TseI GCWGC 8 cut(s) 15, 583, 1452, 1574, 1688, 1894, 1942, 1945
Tsp45I GTSAC 4 cut(s) 786, 792, 798, 804
TspDTI ATGAA 9 cut(s) 215, 440, 506, 578, 1016, 1226, 1328, 1565, 1652
TspGWI ACGGA 1 cut(s) 958
TspMI CCCGGG 1 cut(s) 160
TspRI CASTG 1 cut(s) 1978
Van91I CCANNNNNTGG 1 cut(s) 238
Vha464I CTTAAG 1 cut(s) 104
VpaK11BI GGWCC 2 cut(s) 710, 749
XagI CCTNNNNNAGG 1 cut(s) 831
XapI RAATTY 1 cut(s) 955
XbaI TCTAGA 1 cut(s) 652
XceI RCATGY 2 cut(s) 700, 995
XhoI CTCGAG 3 cut(s) 521, 593, 2027
XmaI CCCGGG 1 cut(s) 160
XmiI GTMKAC 1 cut(s) 192
XspI CTAG 3 cut(s) 653, 1608, 1898
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.