Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0004189

Physical Location & Seq

Genomic Coordinates Reverse (-)

16778859 .. 16780876

Gene Structure 2018 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G162300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 954 bp

ATGAATGAGGTGACTCACCAAAGGATCAAGACAAATGGGATATGGATGCACATAGCAGAGCAAGGGACAGGCCCTCTTGTGCTTCTCCTCCATGGCTTCCCAGAAATATGGTATTCGTGGCGCCACCAGATTGGTTACTTGGCTAAGCATGGCTACCATGTTGTTGCTCCTGATATGAGAGGCTATGGTGATACTGACTCTCCTCTGAGTCCTACCTCCTACTCTATTCAACACCTTGTTGGAGACCTTGTTGGCATTCTTGATCATTTTGGTGAACAAAAGGCATTTATAGTGGGACATGACTTTGGAGCCATTGCAGCTTGGCATCTGAGCCTGTTCAGGCCTGACAGAGTCAAGGCGCTGATTGCACTTTCTGCTCCATACTTCGAAAGATCTTCCAGCACCAGGGATTCTGAATCTGCGAGGCGAATTTTCGGTGACGGGTGTTATGTTTATCAGTTTCAGCAACCAGGAAGAGCAGAAAAGTCGTTTGCAAGATATGATTATTTGACAGTGATGAAGAAATTCTTGCTGTACAACAAGACAGATTATTTGGTAGCTCCTCCTGGAATGGAGATCATTGATTATTTGGAGACACCAGCTGTGTTGCCACCATGGATTTCTGAGGAGGACCTCCAAGTCTATGCTGAAAAGTTTGAAGAATCTGGCTTCACTGGTGCCCTCAATTATTTTCGTACAATTGAGCAGTACTGGGAGCTCATGGGACCATGGCAAGGATCAAAGATAACTGTTCCAGCAAAGTTGATTGTAGGTGACAAAGACATTGGCTTTGAAATTCTGGGCACAAGGGAATATGTGAAAGGAAGTGTTCTCAAGAGTCTTGTGCCAGACCTGGAAGTCGTGATTTTAGATGGCCACCATTTTATCCAGCAAGAGAAGGCTCAAGAAGTCTCAGACGAAATTCTTTCCTTCCTGCGCAAATTTTCGACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Abhydrolase_1

Protein Analysis

318

Amino Acids

36.13

Weight (kDa)

5.64

Isoelectric Point (pI)

38.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004189)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51000
fragaria_vesca	FvH4_1g12460 FvH4_1g12461
malus_domestica	MD02G1138300.v1.1 MD02G1138500.v1.1 MD02G1138600.v1.1 MD15G1252000.v1.1
prunus_persica	Prupe.7G162300_v2.0.a1 Prupe.7G162400_v2.0.a1 Prupe.7G162400_v2.0.a1
pyrus_communis	pycom02g10960 pycom02g10980 pycom15g22200
rosa_chinensis	RchiOBHm_Chr2g0100321 RchiOBHm_Chr2g0100331
rosa_laevigata	RLG00000016965 RLG00000016966
rosa_multiflora	Rmu_sc0003340.1_g000002 Rmu_sc0003340.1_g000003
rosa_roxburghii	Rroxscaffold_2G00142320 Rroxscaffold_2G00142330
rosa_rugosa	Rorug02G0087700 Rorug02G0087700
rosa_samantha	Rh2AG136700 Rh2AG136800 Rh2BG140200 Rh2BG140300 Rh2CG142000 Rh2CG142100 Rh2DG142100 Rh2DG142200
rosa_wichuraiana	Rw2G010690 Rw2G010700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	638, 857
Acc16I	TGCGCA	1 cut(s)	938
AccB1I	GGYRCC	2 cut(s)	120, 677
AclWI	GGATC	2 cut(s)	32, 745
AcoI	YGGCCR	1 cut(s)	874
AcsI	RAATTY	5 cut(s)	429, 524, 795, 921, 941
AcyI	GRCGYC	1 cut(s)	121
AfaI	GTAC	3 cut(s)	536, 697, 710
AfiI	CCNNNNNNNGG	2 cut(s)	405, 734
AgsI	TTSAA	3 cut(s)	230, 659, 794
AjnI	CCWGG	4 cut(s)	404, 469, 565, 852
AluBI	AGCT	4 cut(s)	320, 560, 602, 718
AluI	AGCT	4 cut(s)	320, 560, 602, 718
Alw21I	GWGCWC	1 cut(s)	720
Alw26I	GTCTC	3 cut(s)	237, 587, 916
AlwI	GGATC	2 cut(s)	32, 745
AoxI	GGCC	3 cut(s)	70, 341, 874
ApeKI	GCWGC	1 cut(s)	317
ApoI	RAATTY	5 cut(s)	429, 524, 795, 921, 941
ArsI	GACNNNNNNTTYG	4 cut(s)	535, 567, 773, 805
Asp700I	GAANNNNTTC	1 cut(s)	524
AspLEI	GCGC	3 cut(s)	123, 361, 939
AspS9I	GGNCC	3 cut(s)	71, 631, 725
AsuHPI	GGTGA	6 cut(s)	8, 22, 200, 284, 449, 785
AsuII	TTCGAA	1 cut(s)	387
AvaII	GGWCC	2 cut(s)	631, 725
BaeGI	GKGCMC	2 cut(s)	682, 806
BalI	TGGCCA	1 cut(s)	876
BanI	GGYRCC	2 cut(s)	120, 677
BanII	GRGCYC	1 cut(s)	720
Bbv12I	GWGCWC	1 cut(s)	720
BbvI	GCAGC	1 cut(s)	329
BccI	CCATC	1 cut(s)	866
BcgI	CGANNNNNNTGC	2 cut(s)	468, 502
BciT130I	CCWGG	4 cut(s)	406, 471, 567, 854
BclI	TGATCA	1 cut(s)	262
BcoDI	GTCTC	3 cut(s)	237, 587, 916
BfoI	RGCGCY	2 cut(s)	124, 362
BglII	AGATCT	1 cut(s)	392
BisI	GCNGC	1 cut(s)	318
BlpI	GCTNAGC	1 cut(s)	144
BlsI	GCNGC	1 cut(s)	319
BmcAI	AGTACT	1 cut(s)	710
Bme1390I	CCNGG	4 cut(s)	406, 471, 567, 854
Bme18I	GGWCC	2 cut(s)	631, 725
BmgT120I	GGNCC	3 cut(s)	71, 631, 725
BmiI	GGNNCC	4 cut(s)	122, 310, 679, 726
BmrFI	CCNGG	4 cut(s)	406, 471, 567, 854
BmrI	ACTGGG	1 cut(s)	721
BmsI	GCATC	2 cut(s)	36, 334
BmuI	ACTGGG	1 cut(s)	721
Bpu1102I	GCTNAGC	1 cut(s)	144
Bpu14I	TTCGAA	1 cut(s)	387
BpuEI	CTTGAG	2 cut(s)	818, 888
BsaHI	GRCGYC	1 cut(s)	121
BsaI	GGTCTC	1 cut(s)	237
BsaJI	CCNNGG	4 cut(s)	91, 405, 614, 728
BsaXI	ACNNNNNCTCC	4 cut(s)	184, 214, 234, 264
Bsc4I	CCNNNNNNNGG	2 cut(s)	405, 734
Bse1I	ACTGG	2 cut(s)	679, 716
Bse3DI	GCAATG	1 cut(s)	312
BseBI	CCWGG	4 cut(s)	406, 471, 567, 854
BseDI	CCNNGG	4 cut(s)	91, 405, 614, 728
BseGI	GGATG	1 cut(s)	51
BseLI	CCNNNNNNNGG	2 cut(s)	405, 734
BseMI	GCAATG	1 cut(s)	312
BseMII	CTCAG	4 cut(s)	197, 320, 615, 927
BseNI	ACTGG	2 cut(s)	679, 716
BseRI	GAGGAG	4 cut(s)	77, 192, 552, 641
BseSI	GKGCMC	2 cut(s)	682, 806
BseXI	GCAGC	1 cut(s)	329
BshFI	GGCC	3 cut(s)	72, 343, 876
BshNI	GGYRCC	2 cut(s)	120, 677
BsiHKAI	GWGCWC	1 cut(s)	720
BslFI	GGGAC	3 cut(s)	79, 309, 738
BslI	CCNNNNNNNGG	2 cut(s)	405, 734
BsmAI	GTCTC	3 cut(s)	237, 587, 916
BsmFI	GGGAC	3 cut(s)	79, 309, 738
BsmI	GAATGC	1 cut(s)	255
BsnI	GGCC	3 cut(s)	72, 343, 876
Bso31I	GGTCTC	1 cut(s)	237
Bsp119I	TTCGAA	1 cut(s)	387
Bsp1286I	GDGCHC	3 cut(s)	682, 720, 806
Bsp1407I	TGTACA	1 cut(s)	534
Bsp143I	GATC	5 cut(s)	24, 262, 392, 576, 737
Bsp1720I	GCTNAGC	1 cut(s)	144
Bsp19I	CCATGG	3 cut(s)	91, 614, 728
BspANI	GGCC	3 cut(s)	72, 343, 876
BspCNI	CTCAG	4 cut(s)	198, 321, 616, 926
BspLI	GGNNCC	4 cut(s)	122, 310, 679, 726
BspPI	GGATC	2 cut(s)	32, 745
BspQI	GCTCTTC	1 cut(s)	469
BspT104I	TTCGAA	1 cut(s)	387
BspT107I	GGYRCC	2 cut(s)	120, 677
BspTNI	GGTCTC	1 cut(s)	237
BsrDI	GCAATG	1 cut(s)	312
BsrGI	TGTACA	1 cut(s)	534
BsrI	ACTGG	2 cut(s)	679, 716
BssECI	CCNNGG	4 cut(s)	91, 405, 614, 728
BssMI	GATC	5 cut(s)	24, 262, 392, 576, 737
BssNI	GRCGYC	1 cut(s)	121
BssT1I	CCWWGG	3 cut(s)	91, 614, 728
Bst2UI	CCWGG	4 cut(s)	406, 471, 567, 854
Bst4CI	ACNGT	2 cut(s)	514, 751
Bst6I	CTCTTC	1 cut(s)	469
BstACI	GRCGYC	1 cut(s)	121
BstAPI	GCANNNNNTGC	1 cut(s)	374
BstAUI	TGTACA	1 cut(s)	534
BstBI	TTCGAA	1 cut(s)	387
BstDEI	CTNAG	5 cut(s)	144, 206, 329, 624, 913
BstDSI	CCRYGG	3 cut(s)	91, 614, 728
BstF5I	GGATG	1 cut(s)	51
BstH2I	RGCGCY	2 cut(s)	124, 362
BstHHI	GCGC	3 cut(s)	123, 361, 939
BstKTI	GATC	5 cut(s)	27, 265, 395, 579, 740
BstMAI	GTCTC	3 cut(s)	237, 587, 916
BstMBI	GATC	5 cut(s)	24, 262, 392, 576, 737
BstMWI	GCNNNNNNNGC	3 cut(s)	317, 365, 374
BstNI	CCWGG	4 cut(s)	406, 471, 567, 854
BstSCI	CCNGG	4 cut(s)	404, 469, 565, 852
BstSLI	GKGCMC	2 cut(s)	682, 806
BstV1I	GCAGC	1 cut(s)	329
BstX2I	RGATCY	1 cut(s)	392
BstXI	CCANNNNNNTGG	2 cut(s)	108, 131
BstYI	RGATCY	1 cut(s)	392
BsuRI	GGCC	3 cut(s)	72, 343, 876
BtgI	CCRYGG	3 cut(s)	91, 614, 728
BtsCI	GGATG	1 cut(s)	51
BtsIMutI	CAGTG	2 cut(s)	519, 672
CfoI	GCGC	3 cut(s)	123, 361, 939
Cfr13I	GGNCC	3 cut(s)	71, 631, 725
Csp6I	GTAC	3 cut(s)	535, 696, 709
CviAII	CATG	7 cut(s)	92, 149, 158, 299, 615, 721, 729
CviQI	GTAC	3 cut(s)	535, 696, 709
DdeI	CTNAG	5 cut(s)	144, 206, 329, 624, 913
DinI	GGCGCC	1 cut(s)	122
DpnI	GATC	5 cut(s)	26, 264, 394, 578, 739
DpnII	GATC	5 cut(s)	24, 262, 392, 576, 737
DrdI	GACNNNNNNGTC	2 cut(s)	638, 857
DseDI	GACNNNNNNGTC	2 cut(s)	638, 857
EaeI	YGGCCR	1 cut(s)	874
Eam1104I	CTCTTC	1 cut(s)	469
EarI	CTCTTC	1 cut(s)	469
Ecl136II	GAGCTC	1 cut(s)	718
Eco130I	CCWWGG	3 cut(s)	91, 614, 728
Eco147I	AGGCCT	1 cut(s)	343
Eco24I	GRGCYC	1 cut(s)	720
Eco31I	GGTCTC	1 cut(s)	237
Eco47I	GGWCC	2 cut(s)	631, 725
Eco53kI	GAGCTC	1 cut(s)	718
EcoICRI	GAGCTC	1 cut(s)	718
EcoO109I	RGGNCCY	2 cut(s)	71, 631
EcoRII	CCWGG	4 cut(s)	404, 469, 565, 852
EcoT14I	CCWWGG	3 cut(s)	91, 614, 728
EcoT38I	GRGCYC	1 cut(s)	720
EgeI	GGCGCC	1 cut(s)	122
EheI	GGCGCC	1 cut(s)	122
ErhI	CCWWGG	3 cut(s)	91, 614, 728
FaeI	CATG	7 cut(s)	95, 152, 161, 302, 618, 724, 732
FalI	AAGNNNNNCTT	2 cut(s)	512, 544
FaqI	GGGAC	3 cut(s)	79, 309, 738
FatI	CATG	7 cut(s)	91, 148, 157, 298, 614, 720, 728
FbaI	TGATCA	1 cut(s)	262
Fnu4HI	GCNGC	1 cut(s)	318
FokI	GGATG	1 cut(s)	58
FriOI	GRGCYC	1 cut(s)	720
Fsp4HI	GCNGC	1 cut(s)	318
FspI	TGCGCA	1 cut(s)	938
GlaI	GCGC	3 cut(s)	122, 360, 938
GluI	GCNGC	1 cut(s)	318
HaeII	RGCGCY	2 cut(s)	124, 362
HaeIII	GGCC	3 cut(s)	72, 343, 876
HhaI	GCGC	3 cut(s)	123, 361, 939
Hin1I	GRCGYC	1 cut(s)	121
Hin1II	CATG	7 cut(s)	95, 152, 161, 302, 618, 724, 732
Hin6I	GCGC	3 cut(s)	121, 359, 937
HinP1I	GCGC	3 cut(s)	121, 359, 937
HinfI	GANTC	8 cut(s)	13, 197, 208, 351, 410, 416, 662, 838
HphI	GGTGA	6 cut(s)	8, 22, 200, 284, 449, 785
Hpy166II	GTNNAC	1 cut(s)	275
Hpy188I	TCNGA	5 cut(s)	207, 330, 415, 625, 916
Hpy188III	TCNNGA	6 cut(s)	28, 170, 260, 835, 862, 905
Hpy8I	GTNNAC	1 cut(s)	275
HpyAV	CCTTC	2 cut(s)	892, 940
HpyCH4III	ACNGT	2 cut(s)	514, 751
HpyCH4V	TGCA	4 cut(s)	49, 317, 368, 494
HpyF10VI	GCNNNNNNNGC	3 cut(s)	317, 365, 374
HpyF3I	CTNAG	5 cut(s)	144, 206, 329, 624, 913
Hsp92I	GRCGYC	1 cut(s)	121
Hsp92II	CATG	7 cut(s)	95, 152, 161, 302, 618, 724, 732
HspAI	GCGC	3 cut(s)	121, 359, 937
KasI	GGCGCC	1 cut(s)	120
Ksp22I	TGATCA	1 cut(s)	262
Kzo9I	GATC	5 cut(s)	24, 262, 392, 576, 737
LguI	GCTCTTC	1 cut(s)	469
LmnI	GCTCC	5 cut(s)	172, 308, 382, 565, 715
Lsp1109I	GCAGC	1 cut(s)	329
LweI	GCATC	2 cut(s)	36, 334
MaeIII	GTNAC	4 cut(s)	10, 134, 437, 773
MalI	GATC	5 cut(s)	26, 264, 394, 578, 739
MboI	GATC	5 cut(s)	24, 262, 392, 576, 737
MboII	GAAGA	4 cut(s)	387, 486, 532, 671
MfeI	CAATTG	1 cut(s)	699
MflI	RGATCY	1 cut(s)	392
MhlI	GDGCHC	3 cut(s)	682, 720, 806
MlsI	TGGCCA	1 cut(s)	876
MluCI	AATT	7 cut(s)	429, 524, 685, 699, 795, 921, 941
MluNI	TGGCCA	1 cut(s)	876
Mly113I	GGCGCC	1 cut(s)	121
MlyI	GAGTC	5 cut(s)	7, 191, 217, 360, 847
MmeI	TCCRAC	1 cut(s)	220
Mox20I	TGGCCA	1 cut(s)	876
MroXI	GAANNNNTTC	1 cut(s)	524
MscI	TGGCCA	1 cut(s)	876
MslI	CAYNNNNRTG	1 cut(s)	270
Msp20I	TGGCCA	1 cut(s)	876
MspA1I	CMGCKG	1 cut(s)	602
MspR9I	CCNGG	4 cut(s)	406, 471, 567, 854
MunI	CAATTG	1 cut(s)	699
Mva1269I	GAATGC	1 cut(s)	255
MvaI	CCWGG	4 cut(s)	406, 471, 567, 854
MwoI	GCNNNNNNNGC	3 cut(s)	317, 365, 374
NarI	GGCGCC	1 cut(s)	121
NcoI	CCATGG	3 cut(s)	91, 614, 728
NdeII	GATC	5 cut(s)	24, 262, 392, 576, 737
NlaIII	CATG	7 cut(s)	95, 152, 161, 302, 618, 724, 732
NlaIV	GGNNCC	4 cut(s)	122, 310, 679, 726
NmuCI	GTSAC	3 cut(s)	10, 437, 773
NsbI	TGCGCA	1 cut(s)	938
NspV	TTCGAA	1 cut(s)	387
PceI	AGGCCT	1 cut(s)	343
PciSI	GCTCTTC	1 cut(s)	469
PctI	GAATGC	1 cut(s)	255
PdmI	GAANNNNTTC	1 cut(s)	524
PfeI	GAWTC	3 cut(s)	410, 416, 662
PflFI	GACNNNGTC	1 cut(s)	350
PfoI	TCCNGGA	1 cut(s)	565
PkrI	GCNGC	1 cut(s)	319
PleI	GAGTC	5 cut(s)	7, 191, 216, 359, 846
PluTI	GGCGCC	1 cut(s)	124
PpsI	GAGTC	5 cut(s)	7, 191, 216, 359, 846
PpuMI	RGGWCCY	1 cut(s)	631
Psp124BI	GAGCTC	1 cut(s)	720
Psp5II	RGGWCCY	1 cut(s)	631
Psp6I	CCWGG	4 cut(s)	404, 469, 565, 852
PspGI	CCWGG	4 cut(s)	404, 469, 565, 852
PspN4I	GGNNCC	4 cut(s)	122, 310, 679, 726
PspPI	GGNCC	3 cut(s)	71, 631, 725
PspPPI	RGGWCCY	1 cut(s)	631
PsuI	RGATCY	1 cut(s)	392
PsyI	GACNNNGTC	1 cut(s)	350
PvuII	CAGCTG	1 cut(s)	602
RsaI	GTAC	3 cut(s)	536, 697, 710
RsaNI	GTAC	3 cut(s)	535, 696, 709
RseI	CAYNNNNRTG	1 cut(s)	270
SacI	GAGCTC	1 cut(s)	720
SapI	GCTCTTC	1 cut(s)	469
SatI	GCNGC	1 cut(s)	318
Sau3AI	GATC	5 cut(s)	24, 262, 392, 576, 737
Sau96I	GGNCC	3 cut(s)	71, 631, 725
ScaI	AGTACT	1 cut(s)	710
SchI	GAGTC	5 cut(s)	7, 191, 217, 360, 847
ScrFI	CCNGG	4 cut(s)	406, 471, 567, 854
SduI	GDGCHC	3 cut(s)	682, 720, 806
SfaNI	GCATC	2 cut(s)	36, 334
SfoI	GGCGCC	1 cut(s)	122
SfuI	TTCGAA	1 cut(s)	387
SinI	GGWCC	2 cut(s)	631, 725
SmiMI	CAYNNNNRTG	1 cut(s)	270
SmlI	CTYRAG	2 cut(s)	833, 903
SmoI	CTYRAG	2 cut(s)	833, 903
Sse9I	AATT	7 cut(s)	429, 524, 685, 699, 795, 921, 941
SseBI	AGGCCT	1 cut(s)	343
SspDI	GGCGCC	1 cut(s)	120
SstI	GAGCTC	1 cut(s)	720
StuI	AGGCCT	1 cut(s)	343
StyD4I	CCNGG	4 cut(s)	404, 469, 565, 852
StyI	CCWWGG	3 cut(s)	91, 614, 728
TaaI	ACNGT	2 cut(s)	514, 751
TaqI	TCGA	2 cut(s)	387, 947
TasI	AATT	7 cut(s)	429, 524, 685, 699, 795, 921, 941
TatI	WGTACW	2 cut(s)	534, 708
TfiI	GAWTC	3 cut(s)	410, 416, 662
TscAI	CASTG	2 cut(s)	519, 679
TseFI	GTSAC	3 cut(s)	10, 437, 773
TseI	GCWGC	1 cut(s)	317
Tsp45I	GTSAC	3 cut(s)	10, 437, 773
TspDTI	ATGAA	2 cut(s)	17, 533
TspRI	CASTG	2 cut(s)	519, 679
Tth111I	GACNNNGTC	1 cut(s)	350
VpaK11BI	GGWCC	2 cut(s)	631, 725
XapI	RAATTY	5 cut(s)	429, 524, 795, 921, 941
XmnI	GAANNNNTTC	1 cut(s)	524
ZrmI	AGTACT	1 cut(s)	710

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.