Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0004189

Physical Location & Seq

Genomic Coordinates Reverse (-)

16781537 .. 16783615

Gene Structure 2079 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G162400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 963 bp

ATGGATTACATGATTGAAGTAAATCACCAGAGGATCAAAACCAATGGAATTTGGCTGCATGTAGCAGAAAAAGGAACAGGTCCTCTTGTTCTCTTGCTTCATGGCTTCCCAGAACTCTGGTATGCTTGGCGCCACCAGATCAACCACTTGGCCGAGAATGGCTACCATGTGGTGGCGCCTGACTTGAGAGGCTATGGTGACTCTGATTCTCCTCTCAACCCCAATTCCTACACCATTTTCCACATAGTTGGAGACCTCGTCGGCTTACTTGACCATTTTGGTCAACAGAAGGCATATGTTGTGGGGCATGATTGGGGAGCTGTTGCTGGGTGGCATTTGAGCTTGTTTAGGCCTGATAGAGTGATAGGGCTGGTAAATCTATCTGTTCCATACTTTCCAAGATCTCCAACAACTAAAACTACAGAAGCAATCAGAGAATTGTATGGAGATGGAACTCATGTCATTCAATTCCAGGAACCAGGAAGAGCAGAGAGAGCGTTTGCAAGGTATGACTACACGACGGTGATGAAGAAGTTCTTGCTGATAACCGACAACATGATAGCTCCTCCGGACATGGAATTTATTGATTTCCTGGACACAAAGTCAGCATTGCCAGCGTGGCTAACTGAAGAGGATATCCGGGTCTTCGCTGAAAAATTTGAGGAATCTGGATTCACTGGTCCTTTTAACTACTATCGTGCAATGGACTTGAGTTGGGAGCTTCTTGCACCCTGGCAAGGATCGAAAATTACGGTACCTGTGAAGTTCATGATTGGTGACAAAGATTTCGGCTTTAAGTCATATGGAACAAGTGAATATGTGCTAGGTGATGATTTCAGGAGCCTTGTCCCCAACCTTGAAGTGGTTGTTATAGGCGGCCACCATTTCATCGAGCAAGAGAACCCTCAAGAAGTCTCCAGCCAAATACTTTCCTTCCTGCGTGAACATCCTGTAGATCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Abhydrolase_1

Protein Analysis

321

Amino Acids

36.55

Weight (kDa)

5.24

Isoelectric Point (pI)

36.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004189)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51000
fragaria_vesca	FvH4_1g12460 FvH4_1g12461
malus_domestica	MD02G1138300.v1.1 MD02G1138500.v1.1 MD02G1138600.v1.1 MD15G1252000.v1.1
prunus_persica	Prupe.7G162300_v2.0.a1 Prupe.7G162400_v2.0.a1 Prupe.7G162400_v2.0.a1
pyrus_communis	pycom02g10960 pycom02g10980 pycom15g22200
rosa_chinensis	RchiOBHm_Chr2g0100321 RchiOBHm_Chr2g0100331
rosa_laevigata	RLG00000016965 RLG00000016966
rosa_multiflora	Rmu_sc0003340.1_g000002 Rmu_sc0003340.1_g000003
rosa_roxburghii	Rroxscaffold_2G00142320 Rroxscaffold_2G00142330
rosa_rugosa	Rorug02G0087700 Rorug02G0087700
rosa_samantha	Rh2AG136700 Rh2AG136800 Rh2BG140200 Rh2BG140300 Rh2CG142000 Rh2CG142100 Rh2DG142100 Rh2DG142200
rosa_wichuraiana	Rw2G010690 Rw2G010700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	754
AccB1I	GGYRCC	3 cut(s)	129, 175, 754
AccB7I	CCANNNNNTGG	1 cut(s)	172
AccIII	TCCGGA	1 cut(s)	568
AciI	CCGC	1 cut(s)	876
AclWI	GGATC	2 cut(s)	41, 748
AcoI	YGGCCR	2 cut(s)	150, 877
AcsI	RAATTY	3 cut(s)	48, 578, 656
AcuI	CTGAAG	1 cut(s)	648
AcyI	GRCGYC	2 cut(s)	130, 176
AfaI	GTAC	1 cut(s)	756
AfiI	CCNNNNNNNGG	3 cut(s)	172, 737, 862
AgsI	TTSAA	3 cut(s)	17, 467, 860
AhdI	GACNNNNNGTC	1 cut(s)	601
AjnI	CCWGG	4 cut(s)	471, 478, 591, 731
AleI	CACNNNNGTG	1 cut(s)	521
AluBI	AGCT	4 cut(s)	320, 342, 563, 721
AluI	AGCT	4 cut(s)	320, 342, 563, 721
Alw26I	GTCTC	2 cut(s)	246, 919
AlwI	GGATC	2 cut(s)	41, 748
Aor13HI	TCCGGA	1 cut(s)	568
AoxI	GGCC	3 cut(s)	150, 350, 877
ApeKI	GCWGC	1 cut(s)	55
ApoI	RAATTY	3 cut(s)	48, 578, 656
ArsI	GACNNNNNNTTYG	2 cut(s)	770, 802
Asp700I	GAANNNNTTC	1 cut(s)	533
Asp718I	GGTACC	1 cut(s)	754
AspLEI	GCGC	2 cut(s)	132, 178
AspS9I	GGNCC	2 cut(s)	80, 680
AsuC2I	CCSGG	1 cut(s)	641
AsuHPI	GGTGA	5 cut(s)	17, 209, 535, 788, 839
AvaII	GGWCC	2 cut(s)	80, 680
BanI	GGYRCC	3 cut(s)	129, 175, 754
BbsI	GAAGAC	1 cut(s)	637
BbvI	GCAGC	1 cut(s)	42
BccI	CCATC	1 cut(s)	443
BciT130I	CCWGG	4 cut(s)	473, 480, 593, 733
BcnI	CCSGG	1 cut(s)	641
BcoDI	GTCTC	2 cut(s)	246, 919
BfaI	CTAG	1 cut(s)	824
BfmI	CTRYAG	2 cut(s)	420, 951
BfoI	RGCGCY	2 cut(s)	133, 179
BglI	GCCNNNNNGGC	1 cut(s)	619
BglII	AGATCT	1 cut(s)	401
BisI	GCNGC	2 cut(s)	56, 877
BlsI	GCNGC	2 cut(s)	57, 878
Bme1390I	CCNGG	5 cut(s)	473, 480, 593, 641, 733
Bme18I	GGWCC	2 cut(s)	80, 680
BmeRI	GACNNNNNGTC	1 cut(s)	601
BmgT120I	GGNCC	2 cut(s)	80, 680
BmiI	GGNNCC	5 cut(s)	131, 177, 477, 756, 842
BmrFI	CCNGG	5 cut(s)	473, 480, 593, 641, 733
BpiI	GAAGAC	1 cut(s)	637
BpmI	CTGGAG	1 cut(s)	901
BpuEI	CTTGAG	3 cut(s)	205, 730, 891
BpuMI	CCSGG	1 cut(s)	641
BsaHI	GRCGYC	2 cut(s)	130, 176
BsaI	GGTCTC	1 cut(s)	246
BsaJI	CCNNGG	1 cut(s)	731
BsaWI	WCCGGW	1 cut(s)	568
BsaXI	ACNNNNNCTCC	2 cut(s)	243, 273
Bsc4I	CCNNNNNNNGG	3 cut(s)	172, 737, 862
Bse1I	ACTGG	1 cut(s)	682
Bse3DI	GCAATG	2 cut(s)	608, 708
BseAI	TCCGGA	1 cut(s)	568
BseBI	CCWGG	4 cut(s)	473, 480, 593, 733
BseDI	CCNNGG	1 cut(s)	731
BseGI	GGATG	1 cut(s)	946
BseLI	CCNNNNNNNGG	3 cut(s)	172, 737, 862
BseMI	GCAATG	2 cut(s)	608, 708
BseNI	ACTGG	1 cut(s)	682
BseRI	GAGGAG	2 cut(s)	201, 555
BseXI	GCAGC	1 cut(s)	42
BseYI	CCCAGC	1 cut(s)	326
BshFI	GGCC	3 cut(s)	152, 352, 879
BshNI	GGYRCC	3 cut(s)	129, 175, 754
BsiSI	CCGG	2 cut(s)	569, 640
BslFI	GGGAC	1 cut(s)	833
BslI	CCNNNNNNNGG	3 cut(s)	172, 737, 862
BsmAI	GTCTC	2 cut(s)	246, 919
BsmFI	GGGAC	1 cut(s)	833
BsnI	GGCC	3 cut(s)	152, 352, 879
Bso31I	GGTCTC	1 cut(s)	246
Bsp13I	TCCGGA	1 cut(s)	568
Bsp143I	GATC	5 cut(s)	33, 138, 401, 740, 955
BspACI	CCGC	1 cut(s)	876
BspANI	GGCC	3 cut(s)	152, 352, 879
BspEI	TCCGGA	1 cut(s)	568
BspHI	TCATGA	1 cut(s)	768
BspLI	GGNNCC	5 cut(s)	131, 177, 477, 756, 842
BspPI	GGATC	2 cut(s)	41, 748
BspQI	GCTCTTC	1 cut(s)	478
BspT107I	GGYRCC	3 cut(s)	129, 175, 754
BspTNI	GGTCTC	1 cut(s)	246
BsrDI	GCAATG	2 cut(s)	608, 708
BsrI	ACTGG	1 cut(s)	682
BssECI	CCNNGG	1 cut(s)	731
BssMI	GATC	5 cut(s)	33, 138, 401, 740, 955
BssNI	GRCGYC	2 cut(s)	130, 176
Bst2UI	CCWGG	4 cut(s)	473, 480, 593, 733
Bst4CI	ACNGT	2 cut(s)	523, 754
Bst6I	CTCTTC	2 cut(s)	478, 624
BstACI	GRCGYC	2 cut(s)	130, 176
BstC8I	GCNNGC	1 cut(s)	615
BstF5I	GGATG	1 cut(s)	946
BstH2I	RGCGCY	2 cut(s)	133, 179
BstHHI	GCGC	2 cut(s)	132, 178
BstKTI	GATC	5 cut(s)	36, 141, 404, 743, 958
BstMAI	GTCTC	2 cut(s)	246, 919
BstMBI	GATC	5 cut(s)	33, 138, 401, 740, 955
BstMWI	GCNNNNNNNGC	3 cut(s)	494, 614, 619
BstNI	CCWGG	4 cut(s)	473, 480, 593, 733
BstNSI	RCATGY	1 cut(s)	62
BstSCI	CCNGG	5 cut(s)	471, 478, 591, 639, 731
BstSFI	CTRYAG	2 cut(s)	420, 951
BstV1I	GCAGC	1 cut(s)	42
BstV2I	GAAGAC	1 cut(s)	637
BstX2I	RGATCY	1 cut(s)	401
BstXI	CCANNNNNNTGG	2 cut(s)	117, 248
BstYI	RGATCY	1 cut(s)	401
BsuRI	GGCC	3 cut(s)	152, 352, 879
BtsCI	GGATG	1 cut(s)	946
BtsIMutI	CAGTG	1 cut(s)	675
Cac8I	GCNNGC	1 cut(s)	615
CciI	TCATGA	1 cut(s)	768
CfoI	GCGC	2 cut(s)	132, 178
Cfr13I	GGNCC	2 cut(s)	80, 680
Csp6I	GTAC	1 cut(s)	755
CviAII	CATG	9 cut(s)	10, 59, 101, 167, 308, 458, 556, 574, 769
CviQI	GTAC	1 cut(s)	755
DinI	GGCGCC	2 cut(s)	131, 177
DpnI	GATC	5 cut(s)	35, 140, 403, 742, 957
DpnII	GATC	5 cut(s)	33, 138, 401, 740, 955
DriI	GACNNNNNGTC	1 cut(s)	601
EaeI	YGGCCR	2 cut(s)	150, 877
Eam1104I	CTCTTC	2 cut(s)	478, 624
Eam1105I	GACNNNNNGTC	1 cut(s)	601
EarI	CTCTTC	2 cut(s)	478, 624
Eco147I	AGGCCT	1 cut(s)	352
Eco31I	GGTCTC	1 cut(s)	246
Eco32I	GATATC	1 cut(s)	637
Eco47I	GGWCC	2 cut(s)	80, 680
Eco57I	CTGAAG	1 cut(s)	648
EcoO109I	RGGNCCY	1 cut(s)	80
EcoRII	CCWGG	4 cut(s)	471, 478, 591, 731
EcoRV	GATATC	1 cut(s)	637
EgeI	GGCGCC	2 cut(s)	131, 177
EheI	GGCGCC	2 cut(s)	131, 177
FaeI	CATG	9 cut(s)	13, 62, 104, 170, 311, 461, 559, 577, 772
FalI	AAGNNNNNCTT	2 cut(s)	521, 553
FaqI	GGGAC	1 cut(s)	833
FatI	CATG	9 cut(s)	9, 58, 100, 166, 307, 457, 555, 573, 768
FauNDI	CATATG	2 cut(s)	295, 802
Fnu4HI	GCNGC	2 cut(s)	56, 877
FokI	GGATG	1 cut(s)	933
Fsp4HI	GCNGC	2 cut(s)	56, 877
FspBI	CTAG	1 cut(s)	824
GlaI	GCGC	2 cut(s)	131, 177
GluI	GCNGC	2 cut(s)	56, 877
GsaI	CCCAGC	1 cut(s)	330
GsuI	CTGGAG	1 cut(s)	901
HaeII	RGCGCY	2 cut(s)	133, 179
HaeIII	GGCC	3 cut(s)	152, 352, 879
HapII	CCGG	2 cut(s)	569, 640
HhaI	GCGC	2 cut(s)	132, 178
Hin1I	GRCGYC	2 cut(s)	130, 176
Hin1II	CATG	9 cut(s)	13, 62, 104, 170, 311, 461, 559, 577, 772
Hin6I	GCGC	2 cut(s)	130, 176
HinP1I	GCGC	2 cut(s)	130, 176
HincII	GTYRAC	1 cut(s)	284
HindII	GTYRAC	1 cut(s)	284
HinfI	GANTC	4 cut(s)	200, 206, 665, 672
HpaII	CCGG	2 cut(s)	569, 640
HphI	GGTGA	5 cut(s)	17, 209, 535, 788, 839
Hpy166II	GTNNAC	2 cut(s)	284, 944
Hpy188I	TCNGA	2 cut(s)	205, 434
Hpy188III	TCNNGA	5 cut(s)	569, 669, 769, 838, 908
Hpy8I	GTNNAC	2 cut(s)	284, 944
Hpy99I	CGWCG	2 cut(s)	263, 523
HpyAV	CCTTC	2 cut(s)	283, 943
HpyCH4III	ACNGT	2 cut(s)	523, 754
HpyCH4V	TGCA	4 cut(s)	58, 503, 701, 728
HpyF10VI	GCNNNNNNNGC	3 cut(s)	494, 614, 619
Hsp92I	GRCGYC	2 cut(s)	130, 176
Hsp92II	CATG	9 cut(s)	13, 62, 104, 170, 311, 461, 559, 577, 772
HspAI	GCGC	2 cut(s)	130, 176
KasI	GGCGCC	2 cut(s)	129, 175
Kpn2I	TCCGGA	1 cut(s)	568
KpnI	GGTACC	1 cut(s)	758
Kzo9I	GATC	5 cut(s)	33, 138, 401, 740, 955
LguI	GCTCTTC	1 cut(s)	478
LmnI	GCTCC	4 cut(s)	317, 568, 718, 840
Lsp1109I	GCAGC	1 cut(s)	42
MaeI	CTAG	1 cut(s)	824
MaeIII	GTNAC	2 cut(s)	197, 776
MalI	GATC	5 cut(s)	35, 140, 403, 742, 957
MboI	GATC	5 cut(s)	33, 138, 401, 740, 955
MboII	GAAGA	4 cut(s)	495, 541, 637, 641
MflI	RGATCY	1 cut(s)	401
MluCI	AATT	7 cut(s)	48, 223, 437, 467, 578, 656, 747
Mly113I	GGCGCC	2 cut(s)	130, 176
MlyI	GAGTC	1 cut(s)	194
MmeI	TCCRAC	2 cut(s)	229, 431
MnlI	CCTC	9 cut(s)	24, 93, 182, 222, 266, 576, 625, 655, 915
MroI	TCCGGA	1 cut(s)	568
MroXI	GAANNNNTTC	1 cut(s)	533
MseI	TTAA	2 cut(s)	687, 795
MslI	CAYNNNNRTG	1 cut(s)	521
MspI	CCGG	2 cut(s)	569, 640
MspR9I	CCNGG	5 cut(s)	473, 480, 593, 641, 733
MvaI	CCWGG	4 cut(s)	473, 480, 593, 733
MwoI	GCNNNNNNNGC	3 cut(s)	494, 614, 619
NarI	GGCGCC	2 cut(s)	130, 176
NciI	CCSGG	1 cut(s)	641
NdeI	CATATG	2 cut(s)	295, 802
NdeII	GATC	5 cut(s)	33, 138, 401, 740, 955
NlaIII	CATG	9 cut(s)	13, 62, 104, 170, 311, 461, 559, 577, 772
NlaIV	GGNNCC	5 cut(s)	131, 177, 477, 756, 842
NmeAIII	GCCGAG	1 cut(s)	178
NmuCI	GTSAC	2 cut(s)	197, 776
NspI	RCATGY	1 cut(s)	62
OliI	CACNNNNGTG	1 cut(s)	521
PagI	TCATGA	1 cut(s)	768
PceI	AGGCCT	1 cut(s)	352
PciSI	GCTCTTC	1 cut(s)	478
PdmI	GAANNNNTTC	1 cut(s)	533
PfeI	GAWTC	3 cut(s)	206, 665, 672
PflFI	GACNNNGTC	1 cut(s)	257
PflMI	CCANNNNNTGG	1 cut(s)	172
PfoI	TCCNGGA	2 cut(s)	471, 591
PkrI	GCNGC	2 cut(s)	57, 878
PleI	GAGTC	1 cut(s)	194
PluTI	GGCGCC	2 cut(s)	133, 179
PpsI	GAGTC	1 cut(s)	194
PpuMI	RGGWCCY	1 cut(s)	80
Psp5II	RGGWCCY	1 cut(s)	80
Psp6I	CCWGG	4 cut(s)	471, 478, 591, 731
PspFI	CCCAGC	1 cut(s)	326
PspGI	CCWGG	4 cut(s)	471, 478, 591, 731
PspN4I	GGNNCC	5 cut(s)	131, 177, 477, 756, 842
PspPI	GGNCC	2 cut(s)	80, 680
PspPPI	RGGWCCY	1 cut(s)	80
PsuI	RGATCY	1 cut(s)	401
PsyI	GACNNNGTC	1 cut(s)	257
RsaI	GTAC	1 cut(s)	756
RsaNI	GTAC	1 cut(s)	755
RseI	CAYNNNNRTG	1 cut(s)	521
SapI	GCTCTTC	1 cut(s)	478
SaqAI	TTAA	2 cut(s)	687, 795
SatI	GCNGC	2 cut(s)	56, 877
Sau3AI	GATC	5 cut(s)	33, 138, 401, 740, 955
Sau96I	GGNCC	2 cut(s)	80, 680
SchI	GAGTC	1 cut(s)	194
ScrFI	CCNGG	5 cut(s)	473, 480, 593, 641, 733
SfcI	CTRYAG	2 cut(s)	420, 951
SfoI	GGCGCC	2 cut(s)	131, 177
SinI	GGWCC	2 cut(s)	80, 680
SmiMI	CAYNNNNRTG	1 cut(s)	521
SmlI	CTYRAG	3 cut(s)	184, 709, 906
SmoI	CTYRAG	3 cut(s)	184, 709, 906
Sse9I	AATT	7 cut(s)	48, 223, 437, 467, 578, 656, 747
SseBI	AGGCCT	1 cut(s)	352
SsiI	CCGC	1 cut(s)	876
SspDI	GGCGCC	2 cut(s)	129, 175
SspMI	CTAG	1 cut(s)	824
StuI	AGGCCT	1 cut(s)	352
StyD4I	CCNGG	5 cut(s)	471, 478, 591, 639, 731
TaaI	ACNGT	2 cut(s)	523, 754
TaqI	TCGA	2 cut(s)	743, 891
TasI	AATT	7 cut(s)	48, 223, 437, 467, 578, 656, 747
TauI	GCSGC	1 cut(s)	879
TfiI	GAWTC	3 cut(s)	206, 665, 672
Tru1I	TTAA	2 cut(s)	687, 795
Tru9I	TTAA	2 cut(s)	687, 795
TscAI	CASTG	1 cut(s)	682
TseFI	GTSAC	2 cut(s)	197, 776
TseI	GCWGC	1 cut(s)	55
Tsp45I	GTSAC	2 cut(s)	197, 776
TspDTI	ATGAA	4 cut(s)	89, 542, 757, 877
TspRI	CASTG	1 cut(s)	682
Tth111I	GACNNNGTC	1 cut(s)	257
Van91I	CCANNNNNTGG	1 cut(s)	172
VpaK11BI	GGWCC	2 cut(s)	80, 680
XapI	RAATTY	3 cut(s)	48, 578, 656
XceI	RCATGY	1 cut(s)	62
XcmI	CCANNNNNNNNNTGG	1 cut(s)	859
XmnI	GAANNNNTTC	1 cut(s)	533
XspI	CTAG	1 cut(s)	824

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.