Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0009763

Physical Location & Seq

Genomic Coordinates Reverse (-)

17279293 .. 17281509

Gene Structure 2217 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G171100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 861 bp

ATGGCCGCACCAGTAGTAAACAAAGAGTACCTCAATGAAATTGAGAAGGCTCGACGAGACCTGCGTGCTCTTATCTACAGCAAGAACTGCGCCCCTCTCATGCTTCGTTTAGCGTGGCATGATGCAGCAACATACGACGCTAAACCAAAGAATGGAGTAGCTGGAGGGCCTAATGGCTCAATCAGGAACGAGGAAGAGTTAAACCGTAGTGCAAATTTTGGACTGAATATTGCGGTTAATTTATGTGAAGAAGTGAAGGCCAAACACCCCAAAATTACATATGCTGACCTCTACCAGCTTGCTGGGGTTGTTGCAGTAGAGATCACTGGAGGTCCATCCATTAACTTTGTTCCGGGCAGAAAGGACTCAACTCAATCTCCAGCCGACGGGCGCGTTCCCGATGCAAAACTTGGTGCATCCCATTTGAGGGAAGTTTTCTATCGTATGGGCCTGTCTGACAAGGACATTGTGGTATTGTCTGGAGGCCATACACTGGGAAGGGCACATCAGAACAGATCTGGCTTTGATGGCCCCTGGACAAAGGAGCCTGAAAAGTTTGATAACTCATATTTTGTGGAACTGCTGAAAGGGGAATCAGAGGGACTGTTGAAACTTCCCACAGACAAGGTTTTAGTGGAGGATCCTGTGTTCCGTCGATATGTTGAGCTATATGCAAAGGATAATGAAGCATTCTTCAGAGATTATGCAGTATCACACAAGAAACTATCAGAACTTGGCTTTACCTCACCTTCTCTGGGTCCGAAACTAGTAGTTACTCTTAGCATTGCTGCTGCAATAGTTGCAGCGCTAGTGTACGACAAATGCCAAGGTTTCATCCAAGACATGAAGACCCTCAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0003824 GO:0004130 GO:0004601 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005777 GO:0005778 GO:0005911 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009056 GO:0009506 GO:0009507 GO:0009526 GO:0009536 GO:0009636 GO:0009719 GO:0009725 GO:0009735 GO:0009941 GO:0009987 GO:0010033 GO:0016020 GO:0016209 GO:0016491 GO:0016684 GO:0016688 GO:0016999 GO:0017001 GO:0017144 GO:0030054 GO:0031090 GO:0031903 GO:0031967 GO:0031975 GO:0033554 GO:0034599 GO:0042221 GO:0042579 GO:0042737 GO:0042743 GO:0042744 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051186 GO:0051187 GO:0051716 GO:0055044 GO:0055114 GO:0070887 GO:0072593 GO:0097237 GO:0098588 GO:0098754 GO:0098805 GO:0098869 GO:1901700 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00053 ko00480 map00053 map00480

Pfam Domains

Protein Families

peroxidase

Protein Analysis

287

Amino Acids

31.5

Weight (kDa)

7.69

Isoelectric Point (pI)

42.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009763)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35970 AT4G35970
fragaria_vesca	FvH4_1g11490
malus_domestica	MD02G1127800.v1.1 MD15G1243000.v1.1
prunus_persica	Prupe.7G171100_v2.0.a1 Prupe.7G171100_v2.0.a1
pyrus_communis	pycom02g09990 pycom15g21410
rosa_chinensis	RchiOBHm_Chr2g0099111
rosa_laevigata	RLG00000016849
rosa_multiflora	Rmu_sc0009113.1_g000007 Rmu_sc0012098.1_g000003 Rmu_sc0034643.1_g000002
rosa_roxburghii	Rroxscaffold_2G00143430
rosa_rugosa	Rorug02G0076800
rosa_samantha	Rh2AG125900 Rh2BG129200 Rh2CG130200 Rh2DG130600
rosa_wichuraiana	Rw2G009700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	69
AccB7I	CCANNNNNTGG	2 cut(s)	152, 493
AccII	CGCG	1 cut(s)	393
AciI	CCGC	2 cut(s)	6, 233
AclWI	GGATC	2 cut(s)	635, 648
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	1 cut(s)	214
AcuI	CTGAAG	1 cut(s)	679
AfaI	GTAC	2 cut(s)	29, 815
AfeI	AGCGCT	1 cut(s)	807
AfiI	CCNNNNNNNGG	6 cut(s)	152, 386, 426, 427, 493, 755
AgsI	TTSAA	1 cut(s)	610
AhlI	ACTAGT	1 cut(s)	766
AjnI	CCWGG	1 cut(s)	533
AloI	GAACNNNNNNTCC	2 cut(s)	632, 664
AluBI	AGCT	3 cut(s)	161, 298, 667
AluI	AGCT	3 cut(s)	161, 298, 667
Alw21I	GWGCWC	1 cut(s)	70
Alw26I	GTCTC	1 cut(s)	51
AlwI	GGATC	2 cut(s)	635, 648
Aor51HI	AGCGCT	1 cut(s)	807
AoxI	GGCC	6 cut(s)	3, 167, 258, 448, 484, 529
ApeKI	GCWGC	4 cut(s)	125, 788, 791, 803
ApoI	RAATTY	1 cut(s)	214
AspLEI	GCGC	3 cut(s)	92, 393, 808
AspS9I	GGNCC	5 cut(s)	167, 332, 448, 530, 758
AsuC2I	CCSGG	1 cut(s)	354
AsuHPI	GGTGA	1 cut(s)	738
AvaII	GGWCC	2 cut(s)	332, 758
BaeGI	GKGCMC	1 cut(s)	505
BamHI	GGATCC	1 cut(s)	640
BbsI	GAAGAC	1 cut(s)	854
Bbv12I	GWGCWC	1 cut(s)	70
BbvI	GCAGC	4 cut(s)	137, 775, 778, 815
BccI	CCATC	2 cut(s)	343, 521
BciT130I	CCWGG	1 cut(s)	535
BcnI	CCSGG	1 cut(s)	354
BcoDI	GTCTC	1 cut(s)	51
BcuI	ACTAGT	1 cut(s)	766
BfaI	CTAG	2 cut(s)	767, 809
BfmI	CTRYAG	1 cut(s)	76
BfoI	RGCGCY	1 cut(s)	809
BfuAI	ACCTGC	1 cut(s)	69
BglII	AGATCT	1 cut(s)	515
BisI	GCNGC	5 cut(s)	6, 126, 789, 792, 804
BlsI	GCNGC	5 cut(s)	7, 127, 790, 793, 805
Bme1390I	CCNGG	2 cut(s)	354, 535
Bme18I	GGWCC	2 cut(s)	332, 758
BmgT120I	GGNCC	5 cut(s)	167, 332, 448, 530, 758
BmiI	GGNNCC	4 cut(s)	532, 546, 642, 759
BmrFI	CCNGG	2 cut(s)	354, 535
BmrI	ACTGGG	1 cut(s)	503
BmsI	GCATC	3 cut(s)	112, 391, 425
BmuI	ACTGGG	1 cut(s)	503
BpiI	GAAGAC	1 cut(s)	854
BpmI	CTGGAG	4 cut(s)	183, 348, 363, 501
BpuMI	CCSGG	1 cut(s)	354
BsaI	GGTCTC	1 cut(s)	51
BsaJI	CCNNGG	2 cut(s)	533, 826
BsaXI	ACNNNNNCTCC	2 cut(s)	361, 391
Bsc4I	CCNNNNNNNGG	6 cut(s)	152, 386, 426, 427, 493, 755
Bse1I	ACTGG	3 cut(s)	11, 331, 498
Bse3DI	GCAATG	1 cut(s)	783
BseBI	CCWGG	1 cut(s)	535
BseDI	CCNNGG	2 cut(s)	533, 826
BseGI	GGATG	3 cut(s)	335, 416, 834
BseLI	CCNNNNNNNGG	6 cut(s)	152, 386, 426, 427, 493, 755
BseMI	GCAATG	1 cut(s)	783
BseNI	ACTGG	3 cut(s)	11, 331, 498
BseSI	GKGCMC	1 cut(s)	505
BseXI	GCAGC	4 cut(s)	137, 775, 778, 815
BseYI	CCCAGC	1 cut(s)	302
Bsh1236I	CGCG	1 cut(s)	393
BshFI	GGCC	6 cut(s)	5, 169, 260, 450, 486, 531
BsiHKAI	GWGCWC	1 cut(s)	70
BsiSI	CCGG	1 cut(s)	353
BslFI	GGGAC	1 cut(s)	615
BslI	CCNNNNNNNGG	6 cut(s)	152, 386, 426, 427, 493, 755
BsmAI	GTCTC	1 cut(s)	51
BsmFI	GGGAC	1 cut(s)	615
BsmI	GAATGC	1 cut(s)	689
BsnI	GGCC	6 cut(s)	5, 169, 260, 450, 486, 531
Bso31I	GGTCTC	1 cut(s)	51
Bsp1286I	GDGCHC	2 cut(s)	70, 505
Bsp143I	GATC	3 cut(s)	321, 515, 640
BspACI	CCGC	2 cut(s)	6, 233
BspANI	GGCC	6 cut(s)	5, 169, 260, 450, 486, 531
BspFNI	CGCG	1 cut(s)	393
BspLI	GGNNCC	4 cut(s)	532, 546, 642, 759
BspMI	ACCTGC	1 cut(s)	69
BspPI	GGATC	2 cut(s)	635, 648
BspTNI	GGTCTC	1 cut(s)	51
BsrDI	GCAATG	1 cut(s)	783
BsrI	ACTGG	3 cut(s)	11, 331, 498
BssECI	CCNNGG	2 cut(s)	533, 826
BssMI	GATC	3 cut(s)	321, 515, 640
BssT1I	CCWWGG	1 cut(s)	826
Bst2UI	CCWGG	1 cut(s)	535
Bst4CI	ACNGT	2 cut(s)	206, 606
Bst6I	CTCTTC	1 cut(s)	189
BstAPI	GCANNNNNTGC	2 cut(s)	87, 800
BstC8I	GCNNGC	2 cut(s)	66, 300
BstDEI	CTNAG	1 cut(s)	779
BstF5I	GGATG	3 cut(s)	335, 416, 834
BstFNI	CGCG	1 cut(s)	393
BstH2I	RGCGCY	1 cut(s)	809
BstHHI	GCGC	3 cut(s)	92, 393, 808
BstKTI	GATC	3 cut(s)	324, 518, 643
BstMAI	GTCTC	1 cut(s)	51
BstMBI	GATC	3 cut(s)	321, 515, 640
BstMWI	GCNNNNNNNGC	3 cut(s)	87, 528, 800
BstNI	CCWGG	1 cut(s)	535
BstSCI	CCNGG	2 cut(s)	352, 533
BstSFI	CTRYAG	1 cut(s)	76
BstSLI	GKGCMC	1 cut(s)	505
BstUI	CGCG	1 cut(s)	393
BstV1I	GCAGC	4 cut(s)	137, 775, 778, 815
BstV2I	GAAGAC	1 cut(s)	854
BstX2I	RGATCY	2 cut(s)	515, 640
BstXI	CCANNNNNNTGG	1 cut(s)	302
BstYI	RGATCY	2 cut(s)	515, 640
BsuRI	GGCC	6 cut(s)	5, 169, 260, 450, 486, 531
BtsCI	GGATG	3 cut(s)	335, 416, 834
BtsIMutI	CAGTG	2 cut(s)	324, 491
BveI	ACCTGC	1 cut(s)	69
Cac8I	GCNNGC	2 cut(s)	66, 300
CfoI	GCGC	3 cut(s)	92, 393, 808
Cfr13I	GGNCC	5 cut(s)	167, 332, 448, 530, 758
CseI	GACGC	1 cut(s)	146
Csp6I	GTAC	2 cut(s)	28, 814
CviAII	CATG	3 cut(s)	100, 119, 844
CviQI	GTAC	2 cut(s)	28, 814
DdeI	CTNAG	1 cut(s)	779
DpnI	GATC	3 cut(s)	323, 517, 642
DpnII	GATC	3 cut(s)	321, 515, 640
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	1 cut(s)	189
EarI	CTCTTC	1 cut(s)	189
Eco130I	CCWWGG	1 cut(s)	826
Eco31I	GGTCTC	1 cut(s)	51
Eco47I	GGWCC	2 cut(s)	332, 758
Eco47III	AGCGCT	1 cut(s)	807
Eco57I	CTGAAG	1 cut(s)	679
EcoO109I	RGGNCCY	1 cut(s)	167
EcoRII	CCWGG	1 cut(s)	533
EcoT14I	CCWWGG	1 cut(s)	826
ErhI	CCWWGG	1 cut(s)	826
FaeI	CATG	3 cut(s)	103, 122, 847
FaqI	GGGAC	1 cut(s)	615
FatI	CATG	3 cut(s)	99, 118, 843
FauNDI	CATATG	1 cut(s)	280
Fnu4HI	GCNGC	5 cut(s)	6, 126, 789, 792, 804
FokI	GGATG	3 cut(s)	322, 403, 821
Fsp4HI	GCNGC	5 cut(s)	6, 126, 789, 792, 804
FspBI	CTAG	2 cut(s)	767, 809
GlaI	GCGC	3 cut(s)	91, 392, 807
GluI	GCNGC	5 cut(s)	6, 126, 789, 792, 804
GsaI	CCCAGC	1 cut(s)	306
GsuI	CTGGAG	4 cut(s)	183, 348, 363, 501
HaeII	RGCGCY	1 cut(s)	809
HaeIII	GGCC	6 cut(s)	5, 169, 260, 450, 486, 531
HapII	CCGG	1 cut(s)	353
HgaI	GACGC	1 cut(s)	146
HhaI	GCGC	3 cut(s)	92, 393, 808
Hin1II	CATG	3 cut(s)	103, 122, 847
Hin6I	GCGC	3 cut(s)	90, 391, 806
HinP1I	GCGC	3 cut(s)	90, 391, 806
HinfI	GANTC	2 cut(s)	365, 593
HpaII	CCGG	1 cut(s)	353
HphI	GGTGA	1 cut(s)	738
Hpy166II	GTNNAC	2 cut(s)	19, 814
Hpy188I	TCNGA	6 cut(s)	457, 510, 598, 698, 730, 762
Hpy188III	TCNNGA	3 cut(s)	184, 398, 480
Hpy8I	GTNNAC	2 cut(s)	19, 814
Hpy99I	CGWCG	4 cut(s)	57, 140, 389, 657
HpyAV	CCTTC	4 cut(s)	40, 250, 492, 759
HpyCH4III	ACNGT	2 cut(s)	206, 606
HpyCH4V	TGCA	9 cut(s)	125, 212, 314, 404, 416, 674, 707, 794, 803
HpyF10VI	GCNNNNNNNGC	3 cut(s)	87, 528, 800
HpyF3I	CTNAG	1 cut(s)	779
Hsp92II	CATG	3 cut(s)	103, 122, 847
HspAI	GCGC	3 cut(s)	90, 391, 806
Kzo9I	GATC	3 cut(s)	321, 515, 640
LmnI	GCTCC	1 cut(s)	544
Lsp1109I	GCAGC	4 cut(s)	137, 775, 778, 815
LweI	GCATC	3 cut(s)	112, 391, 425
MaeI	CTAG	2 cut(s)	767, 809
MaeIII	GTNAC	1 cut(s)	772
MalI	GATC	3 cut(s)	323, 517, 642
MboI	GATC	3 cut(s)	321, 515, 640
MboII	GAAGA	4 cut(s)	206, 260, 685, 859
MflI	RGATCY	2 cut(s)	515, 640
MhlI	GDGCHC	2 cut(s)	70, 505
MluCI	AATT	5 cut(s)	39, 214, 238, 273, 856
MlyI	GAGTC	1 cut(s)	359
MseI	TTAA	3 cut(s)	200, 237, 342
MspI	CCGG	1 cut(s)	353
MspR9I	CCNGG	2 cut(s)	354, 535
Mva1269I	GAATGC	1 cut(s)	689
MvaI	CCWGG	1 cut(s)	535
MvnI	CGCG	1 cut(s)	393
MwoI	GCNNNNNNNGC	3 cut(s)	87, 528, 800
NciI	CCSGG	1 cut(s)	354
NdeI	CATATG	1 cut(s)	280
NdeII	GATC	3 cut(s)	321, 515, 640
NlaIII	CATG	3 cut(s)	103, 122, 847
NlaIV	GGNNCC	4 cut(s)	532, 546, 642, 759
PcsI	WCGNNNNNNNCGW	1 cut(s)	61
PctI	GAATGC	1 cut(s)	689
PfeI	GAWTC	1 cut(s)	593
PflMI	CCANNNNNTGG	2 cut(s)	152, 493
PkrI	GCNGC	5 cut(s)	7, 127, 790, 793, 805
PleI	GAGTC	1 cut(s)	359
PpsI	GAGTC	1 cut(s)	359
Psp6I	CCWGG	1 cut(s)	533
PspFI	CCCAGC	1 cut(s)	302
PspGI	CCWGG	1 cut(s)	533
PspN4I	GGNNCC	4 cut(s)	532, 546, 642, 759
PspPI	GGNCC	5 cut(s)	167, 332, 448, 530, 758
PsuI	RGATCY	2 cut(s)	515, 640
RsaI	GTAC	2 cut(s)	29, 815
RsaNI	GTAC	2 cut(s)	28, 814
SaqAI	TTAA	3 cut(s)	200, 237, 342
SatI	GCNGC	5 cut(s)	6, 126, 789, 792, 804
Sau3AI	GATC	3 cut(s)	321, 515, 640
Sau96I	GGNCC	5 cut(s)	167, 332, 448, 530, 758
SchI	GAGTC	1 cut(s)	359
ScrFI	CCNGG	2 cut(s)	354, 535
SduI	GDGCHC	2 cut(s)	70, 505
SfaNI	GCATC	3 cut(s)	112, 391, 425
SfcI	CTRYAG	1 cut(s)	76
SinI	GGWCC	2 cut(s)	332, 758
SpeI	ACTAGT	1 cut(s)	766
Sse9I	AATT	5 cut(s)	39, 214, 238, 273, 856
SsiI	CCGC	2 cut(s)	6, 233
SspI	AATATT	1 cut(s)	229
SspMI	CTAG	2 cut(s)	767, 809
StyD4I	CCNGG	2 cut(s)	352, 533
StyI	CCWWGG	1 cut(s)	826
TaaI	ACNGT	2 cut(s)	206, 606
TaqI	TCGA	2 cut(s)	52, 655
TasI	AATT	5 cut(s)	39, 214, 238, 273, 856
TauI	GCSGC	1 cut(s)	8
TfiI	GAWTC	1 cut(s)	593
Tru1I	TTAA	3 cut(s)	200, 237, 342
Tru9I	TTAA	3 cut(s)	200, 237, 342
TscAI	CASTG	2 cut(s)	331, 498
TseI	GCWGC	4 cut(s)	125, 788, 791, 803
TspDTI	ATGAA	4 cut(s)	51, 699, 823, 860
TspGWI	ACGGA	1 cut(s)	641
TspRI	CASTG	2 cut(s)	331, 498
Van91I	CCANNNNNTGG	2 cut(s)	152, 493
VpaK11BI	GGWCC	2 cut(s)	332, 758
XapI	RAATTY	1 cut(s)	214
XspI	CTAG	2 cut(s)	767, 809

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.