Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0012098.1

Orthogroup ID

OG0009763

Physical Location & Seq

Genomic Coordinates Reverse (-)

7735 .. 12459

Gene Structure 4725 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0012098.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1872 bp

atgggaggttgttcttgttcttcatggtcgttttgggccaatggcccaagtaaaggctcaaggcccaagttaacgacaaagtccttcctcagactccggatgacgcatcgagctcagcagaccgaaccagaaccaagcgcgtggaacgtacgcgccgccatggcggaacctgtcgtagtagacgcgcagtacctgaaagaaatcgagaaggctcgtcgggacctccgcgctctcatctccaaccgcaactgcgctcccatcatgcttcgtctggcgtggcacgatgctggaacttacaacgctgaaacgaagactggaggggcaactggctccatcaggaatgagcatgagttgggccatgcagctaatagtggtttgaaaattgctgttaatttttgtgaggaagtgaaagccaaacatccgaaaatcacatatgctgacctttaccagcttgctggggttgttgcagtcgaggtcaccggaggccctactattgagtttgttcccggtaggaaggattcattggaatctcctgaagaaggaaggcttccggatgccaaaaaaggtgcaccacatttgaaggacatcttttaccgcatgggtctgtctgataaggacattgtggcactgtctggagcccatacattgggtagagcacatccagaaaggtccggctttgatggcccttggacaaaagagcctctgaagtttgacaattcatactttgtggagctactgaaaggagaatcagaggggctgttgaaactacccacagacaaggctttattggatgatcctgcgttccgcccctacgttgaactttatgcaaaggatgaggatgcatttttcagagactatgcagcatcacagaagaaactatcagagctaggcttcactccacctccatctagtctcaaggaagctgaaaagactagtgtcgtagtggcacaaagtgctgtgggagttgcagttgcagctgcggtggtgattctgggctgcataccagttctcatggcggcattacggtctgtaaaggaaaagcaactctacctccagggaattgagagggctcgccaagaccttcgtgctcttatctacagcaagaactgtgctcctatcatgcttcgtttagcgtggcatgatgctggaacatatgatgcttttacaaaaactggagggcctaatggctcaatcaggaatgaggaagagttaaaacatagcgcaaataatggattgaaaatcgcggttgacttatgtgaagaagtgaaggccaagcacccaaaaattacatatgctgacctctaccagcttgctggggttgttgcaatagaggtcactggaggtccacctattgactttgttccgggtagaaaggactcaaagcagtcaccaccagaagggcgccttccagatgccaaactcggtgcatcacatttaagggatactttctaccgtatgggactgtctgaccaggacattgtggcgctatcaggaggccacacattgggaagggcacatcaggagagatcaggctttgatggaccctggacaaaggagcctgcgaagtttgacaactcatactttgtggaactattgaaaggggagtcagggggactgctgaaacttcccacagacaaggctctagtggaggatcctgggttccatcactttgtcgaactatatgcaaacgatagggatgaattcttcagagactatgcagtatcacacaagaaactatcagaacttggctttagcccaccttcttcaggtcagaaggtaggacttgctcttagcattgctgctgtcttagttctggcagttgtgtgggagttgacagacccgtttctcatatggaaacaatacaataattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0003824 GO:0004130 GO:0004601 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005777 GO:0005778 GO:0005911 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009056 GO:0009506 GO:0009507 GO:0009526 GO:0009536 GO:0009636 GO:0009719 GO:0009725 GO:0009735 GO:0009941 GO:0009987 GO:0010033 GO:0016020 GO:0016209 GO:0016491 GO:0016684 GO:0016688 GO:0016999 GO:0017001 GO:0017144 GO:0030054 GO:0031090 GO:0031903 GO:0031967 GO:0031975 GO:0033554 GO:0034599 GO:0042221 GO:0042579 GO:0042737 GO:0042743 GO:0042744 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051186 GO:0051187 GO:0051716 GO:0055044 GO:0055114 GO:0070887 GO:0072593 GO:0097237 GO:0098588 GO:0098754 GO:0098805 GO:0098869 GO:1901700 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00053 ko00480 map00053 map00480

Pfam Domains

Protein Families

peroxidase

Protein Analysis

623

Amino Acids

68.31

Weight (kDa)

7.0

Isoelectric Point (pI)

40.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009763)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35970 AT4G35970
fragaria_vesca	FvH4_1g11490
malus_domestica	MD02G1127800.v1.1 MD15G1243000.v1.1
prunus_persica	Prupe.7G171100_v2.0.a1 Prupe.7G171100_v2.0.a1
pyrus_communis	pycom02g09990 pycom15g21410
rosa_chinensis	RchiOBHm_Chr2g0099111
rosa_laevigata	RLG00000016849
rosa_multiflora	Rmu_sc0009113.1_g000007 Rmu_sc0012098.1_g000003 Rmu_sc0034643.1_g000002
rosa_roxburghii	Rroxscaffold_2G00143430
rosa_rugosa	Rorug02G0076800
rosa_samantha	Rh2AG125900 Rh2BG129200 Rh2CG130200 Rh2DG130600
rosa_wichuraiana	Rw2G009700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1401
AccB7I	CCANNNNNTGG	2 cut(s)	646, 1504
AccI	GTMKAC	1 cut(s)	180
AccII	CGCG	5 cut(s)	140, 153, 185, 228, 1244
AccIII	TCCGGA	2 cut(s)	96, 550
AciI	CCGC	9 cut(s)	156, 164, 226, 244, 595, 805, 980, 1016, 1244
AclWI	GGATC	3 cut(s)	788, 1646, 1659
AcsI	RAATTY	1 cut(s)	1700
AcuI	CTGAAG	4 cut(s)	555, 725, 1690, 1749
AcyI	GRCGYC	1 cut(s)	1402
AdeI	CACNNNGTG	1 cut(s)	953
AfaI	GTAC	2 cut(s)	150, 191
AfiI	CCNNNNNNNGG	6 cut(s)	53, 539, 646, 1397, 1504, 1766
AgsI	TTSAA	6 cut(s)	379, 580, 763, 818, 1237, 1597
AhlI	ACTAGT	1 cut(s)	932
AjnI	CCWGG	4 cut(s)	1053, 1470, 1544, 1654
AjuI	GAANNNNNNNTTGG	2 cut(s)	506, 538
AloI	GAACNNNNNNTCC	2 cut(s)	1643, 1675
AluBI	AGCT	8 cut(s)	113, 365, 451, 733, 886, 923, 977, 1309
AluI	AGCT	8 cut(s)	113, 365, 451, 733, 886, 923, 977, 1309
Alw21I	GWGCWC	5 cut(s)	115, 571, 658, 1090, 1114
Alw26I	GTCTC	3 cut(s)	846, 917, 1704
Alw44I	GTGCAC	1 cut(s)	567
AlwI	GGATC	3 cut(s)	788, 1646, 1659
AlwNI	CAGNNNCTG	1 cut(s)	193
Aor13HI	TCCGGA	2 cut(s)	96, 550
AoxI	GGCC	9 cut(s)	36, 43, 62, 355, 484, 682, 1178, 1269, 1495
ApaLI	GTGCAC	1 cut(s)	567
ApeKI	GCWGC	6 cut(s)	362, 860, 974, 977, 996, 1799
ApoI	RAATTY	1 cut(s)	1700
AspLEI	GCGC	8 cut(s)	140, 155, 187, 230, 254, 1223, 1404, 1486
AsuC2I	CCSGG	2 cut(s)	507, 1365
AsuHPI	GGTGA	3 cut(s)	469, 997, 1380
AvaII	GGWCC	4 cut(s)	220, 669, 1343, 1541
BaeGI	GKGCMC	2 cut(s)	571, 1516
BamHI	GGATCC	1 cut(s)	1651
BanI	GGYRCC	1 cut(s)	1401
BanII	GRGCYC	3 cut(s)	115, 640, 1072
BbsI	GAAGAC	1 cut(s)	317
Bbv12I	GWGCWC	5 cut(s)	115, 571, 658, 1090, 1114
BbvI	GCAGC	6 cut(s)	374, 872, 964, 983, 986, 1786
BccI	CCATC	6 cut(s)	266, 341, 674, 913, 1532, 1671
BcgI	CGANNNNNNTGC	2 cut(s)	1664, 1698
BciT130I	CCWGG	4 cut(s)	1055, 1472, 1546, 1656
BciVI	GTATCC	1 cut(s)	1435
BcnI	CCSGG	2 cut(s)	507, 1365
BcoDI	GTCTC	3 cut(s)	846, 917, 1704
BcuI	ACTAGT	1 cut(s)	932
BfaI	CTAG	4 cut(s)	887, 909, 933, 1643
BfmI	CTRYAG	1 cut(s)	1096
BfoI	RGCGCY	2 cut(s)	1405, 1487
BfuI	GTATCC	1 cut(s)	1435
BglI	GCCNNNNNGGC	1 cut(s)	161
BisI	GCNGC	8 cut(s)	156, 363, 861, 975, 978, 997, 1017, 1800
BlpI	GCTNAGC	1 cut(s)	114
BlsI	GCNGC	8 cut(s)	157, 364, 862, 976, 979, 998, 1018, 1801
Bme1390I	CCNGG	6 cut(s)	507, 1055, 1365, 1472, 1546, 1656
Bme18I	GGWCC	4 cut(s)	220, 669, 1343, 1541
BmiI	GGNNCC	9 cut(s)	168, 221, 331, 637, 1403, 1543, 1557, 1653, 1661
BmrFI	CCNGG	6 cut(s)	507, 1055, 1365, 1472, 1546, 1656
BmsI	GCATC	9 cut(s)	115, 274, 544, 829, 872, 1132, 1147, 1402, 1436
BoxI	GACNNNNGTC	1 cut(s)	935
BpiI	GAAGAC	1 cut(s)	317
BpmI	CTGGAG	5 cut(s)	336, 654, 1037, 1194, 1359
Bpu1102I	GCTNAGC	1 cut(s)	114
BpuEI	CTTGAG	2 cut(s)	43, 899
BpuMI	CCSGG	2 cut(s)	507, 1365
BsaHI	GRCGYC	1 cut(s)	1402
BsaJI	CCNNGG	5 cut(s)	159, 686, 1054, 1544, 1655
BsaWI	WCCGGW	3 cut(s)	96, 479, 550
BsaXI	ACNNNNNCTCC	6 cut(s)	886, 916, 954, 984, 1035, 1065
Bsc4I	CCNNNNNNNGG	6 cut(s)	53, 539, 646, 1397, 1504, 1766
Bse1I	ACTGG	5 cut(s)	319, 331, 1004, 1177, 1342
Bse3DI	GCAATG	1 cut(s)	1794
BseAI	TCCGGA	2 cut(s)	96, 550
BseBI	CCWGG	4 cut(s)	1055, 1472, 1546, 1656
BseDI	CCNNGG	5 cut(s)	159, 686, 1054, 1544, 1655
BseGI	GGATG	8 cut(s)	105, 418, 559, 658, 796, 838, 844, 1702
BseLI	CCNNNNNNNGG	6 cut(s)	53, 539, 646, 1397, 1504, 1766
BseMI	GCAATG	1 cut(s)	1794
BseMII	CTCAG	2 cut(s)	103, 128
BseNI	ACTGG	5 cut(s)	319, 331, 1004, 1177, 1342
BseSI	GKGCMC	2 cut(s)	571, 1516
BseXI	GCAGC	6 cut(s)	374, 872, 964, 983, 986, 1786
BseYI	CCCAGC	2 cut(s)	455, 1313
Bsh1236I	CGCG	5 cut(s)	140, 153, 185, 228, 1244
BshFI	GGCC	9 cut(s)	38, 45, 64, 357, 486, 684, 1180, 1271, 1497
BshNI	GGYRCC	1 cut(s)	1401
BsiHKAI	GWGCWC	5 cut(s)	115, 571, 658, 1090, 1114
BsiSI	CCGG	6 cut(s)	97, 480, 507, 551, 672, 1364
BsiWI	CGTACG	1 cut(s)	148
BslFI	GGGAC	3 cut(s)	233, 1473, 1626
BslI	CCNNNNNNNGG	6 cut(s)	53, 539, 646, 1397, 1504, 1766
BsmAI	GTCTC	3 cut(s)	846, 917, 1704
BsmFI	GGGAC	3 cut(s)	233, 1473, 1626
BsnI	GGCC	9 cut(s)	38, 45, 64, 357, 486, 684, 1180, 1271, 1497
Bsp1286I	GDGCHC	8 cut(s)	115, 571, 640, 658, 1072, 1090, 1114, 1516
Bsp13I	TCCGGA	2 cut(s)	96, 550
Bsp143I	GATC	3 cut(s)	793, 1526, 1651
Bsp1720I	GCTNAGC	1 cut(s)	114
Bsp19I	CCATGG	1 cut(s)	159
BspACI	CCGC	9 cut(s)	156, 164, 226, 244, 595, 805, 980, 1016, 1244
BspANI	GGCC	9 cut(s)	38, 45, 64, 357, 486, 684, 1180, 1271, 1497
BspCNI	CTCAG	2 cut(s)	102, 127
BspEI	TCCGGA	2 cut(s)	96, 550
BspFNI	CGCG	5 cut(s)	140, 153, 185, 228, 1244
BspLI	GGNNCC	9 cut(s)	168, 221, 331, 637, 1403, 1543, 1557, 1653, 1661
BspPI	GGATC	3 cut(s)	788, 1646, 1659
BspT107I	GGYRCC	1 cut(s)	1401
BsrDI	GCAATG	1 cut(s)	1794
BsrI	ACTGG	5 cut(s)	319, 331, 1004, 1177, 1342
BssECI	CCNNGG	5 cut(s)	159, 686, 1054, 1544, 1655
BssMI	GATC	3 cut(s)	793, 1526, 1651
BssNI	GRCGYC	1 cut(s)	1402
BssT1I	CCWWGG	2 cut(s)	159, 686
Bst2UI	CCWGG	4 cut(s)	1055, 1472, 1546, 1656
Bst4CI	ACNGT	5 cut(s)	630, 1026, 1109, 1454, 1464
Bst6I	CTCTTC	1 cut(s)	1200
BstACI	GRCGYC	1 cut(s)	1402
BstAPI	GCANNNNNTGC	1 cut(s)	953
BstC8I	GCNNGC	4 cut(s)	453, 1072, 1311, 1560
BstDEI	CTNAG	4 cut(s)	89, 114, 1790, 1807
BstDSI	CCRYGG	1 cut(s)	159
BstEII	GGTNACC	1 cut(s)	475
BstENI	CCTNNNNNAGG	2 cut(s)	537, 1764
BstF5I	GGATG	8 cut(s)	105, 418, 559, 658, 796, 838, 844, 1702
BstFNI	CGCG	5 cut(s)	140, 153, 185, 228, 1244
BstH2I	RGCGCY	2 cut(s)	1405, 1487
BstHHI	GCGC	8 cut(s)	140, 155, 187, 230, 254, 1223, 1404, 1486
BstKTI	GATC	3 cut(s)	796, 1529, 1654
BstMAI	GTCTC	3 cut(s)	846, 917, 1704
BstMBI	GATC	3 cut(s)	793, 1526, 1651
BstMWI	GCNNNNNNNGC	4 cut(s)	161, 681, 953, 974
BstNI	CCWGG	4 cut(s)	1055, 1472, 1546, 1656
BstPAI	GACNNNNGTC	1 cut(s)	935
BstPI	GGTNACC	1 cut(s)	475
BstSCI	CCNGG	6 cut(s)	505, 1053, 1363, 1470, 1544, 1654
BstSFI	CTRYAG	1 cut(s)	1096
BstSLI	GKGCMC	2 cut(s)	571, 1516
BstUI	CGCG	5 cut(s)	140, 153, 185, 228, 1244
BstV1I	GCAGC	6 cut(s)	374, 872, 964, 983, 986, 1786
BstV2I	GAAGAC	1 cut(s)	317
BstX2I	RGATCY	1 cut(s)	1651
BstXI	CCANNNNNNTGG	3 cut(s)	141, 455, 1313
BstYI	RGATCY	1 cut(s)	1651
BsuI	GTATCC	1 cut(s)	1435
BsuRI	GGCC	9 cut(s)	38, 45, 64, 357, 486, 684, 1180, 1271, 1497
BtgI	CCRYGG	1 cut(s)	159
BtsCI	GGATG	8 cut(s)	105, 418, 559, 658, 796, 838, 844, 1702
BtsIMutI	CAGTG	2 cut(s)	626, 1335
Cac8I	GCNNGC	4 cut(s)	453, 1072, 1311, 1560
CaiI	CAGNNNCTG	1 cut(s)	193
CfoI	GCGC	8 cut(s)	140, 155, 187, 230, 254, 1223, 1404, 1486
CseI	GACGC	2 cut(s)	112, 191
Csp6I	GTAC	2 cut(s)	149, 190
CviAII	CATG	9 cut(s)	24, 160, 262, 347, 359, 598, 1012, 1120, 1139
CviQI	GTAC	2 cut(s)	149, 190
DdeI	CTNAG	4 cut(s)	89, 114, 1790, 1807
DinI	GGCGCC	1 cut(s)	1403
DpnI	GATC	3 cut(s)	795, 1528, 1653
DpnII	GATC	3 cut(s)	793, 1526, 1651
DraIII	CACNNNGTG	1 cut(s)	953
Eam1104I	CTCTTC	1 cut(s)	1200
EarI	CTCTTC	1 cut(s)	1200
EciI	GGCGGA	2 cut(s)	179, 794
Ecl136II	GAGCTC	1 cut(s)	113
Eco130I	CCWWGG	2 cut(s)	159, 686
Eco24I	GRGCYC	3 cut(s)	115, 640, 1072
Eco47I	GGWCC	4 cut(s)	220, 669, 1343, 1541
Eco53kI	GAGCTC	1 cut(s)	113
Eco57I	CTGAAG	4 cut(s)	555, 725, 1690, 1749
Eco91I	GGTNACC	1 cut(s)	475
EcoICRI	GAGCTC	1 cut(s)	113
EcoNI	CCTNNNNNAGG	2 cut(s)	537, 1764
EcoO109I	RGGNCCY	3 cut(s)	220, 485, 1178
EcoO65I	GGTNACC	1 cut(s)	475
EcoRI	GAATTC	1 cut(s)	1700
EcoRII	CCWGG	4 cut(s)	1053, 1470, 1544, 1654
EcoT14I	CCWWGG	2 cut(s)	159, 686
EcoT22I	ATGCAT	1 cut(s)	844
EcoT38I	GRGCYC	3 cut(s)	115, 640, 1072
EgeI	GGCGCC	1 cut(s)	1403
EheI	GGCGCC	1 cut(s)	1403
ErhI	CCWWGG	2 cut(s)	159, 686
FaeI	CATG	9 cut(s)	27, 163, 265, 350, 362, 601, 1015, 1123, 1142
FalI	AAGNNNNNCTT	8 cut(s)	531, 563, 572, 604, 1389, 1421, 1429, 1461
FaqI	GGGAC	3 cut(s)	233, 1473, 1626
FatI	CATG	9 cut(s)	23, 159, 261, 346, 358, 597, 1011, 1119, 1138
FauNDI	CATATG	4 cut(s)	433, 1153, 1291, 1850
FblI	GTMKAC	1 cut(s)	180
Fnu4HI	GCNGC	8 cut(s)	156, 363, 861, 975, 978, 997, 1017, 1800
FokI	GGATG	8 cut(s)	112, 405, 566, 645, 803, 845, 851, 1709
FriOI	GRGCYC	3 cut(s)	115, 640, 1072
Fsp4HI	GCNGC	8 cut(s)	156, 363, 861, 975, 978, 997, 1017, 1800
FspBI	CTAG	4 cut(s)	887, 909, 933, 1643
GlaI	GCGC	8 cut(s)	139, 154, 186, 229, 253, 1222, 1403, 1485
GluI	GCNGC	8 cut(s)	156, 363, 861, 975, 978, 997, 1017, 1800
GsaI	CCCAGC	2 cut(s)	459, 1317
GsuI	CTGGAG	5 cut(s)	336, 654, 1037, 1194, 1359
HaeII	RGCGCY	2 cut(s)	1405, 1487
HaeIII	GGCC	9 cut(s)	38, 45, 64, 357, 486, 684, 1180, 1271, 1497
HapII	CCGG	6 cut(s)	97, 480, 507, 551, 672, 1364
HgaI	GACGC	2 cut(s)	112, 191
HhaI	GCGC	8 cut(s)	140, 155, 187, 230, 254, 1223, 1404, 1486
Hin1I	GRCGYC	1 cut(s)	1402
Hin1II	CATG	9 cut(s)	27, 163, 265, 350, 362, 601, 1015, 1123, 1142
Hin6I	GCGC	8 cut(s)	138, 153, 185, 228, 252, 1221, 1402, 1484
HinP1I	GCGC	8 cut(s)	138, 153, 185, 228, 252, 1221, 1402, 1484
HincII	GTYRAC	3 cut(s)	72, 1249, 1833
HindII	GTYRAC	3 cut(s)	72, 1249, 1833
HinfI	GANTC	7 cut(s)	93, 518, 527, 746, 988, 1376, 1604
HpaI	GTTAAC	1 cut(s)	72
HpaII	CCGG	6 cut(s)	97, 480, 507, 551, 672, 1364
HphI	GGTGA	3 cut(s)	469, 997, 1380
Hpy166II	GTNNAC	6 cut(s)	72, 181, 569, 1249, 1346, 1833
Hpy8I	GTNNAC	6 cut(s)	72, 181, 569, 1249, 1346, 1833
Hpy99I	CGWCG	1 cut(s)	219
HpyCH4III	ACNGT	5 cut(s)	630, 1026, 1109, 1454, 1464
HpyCH4IV	ACGT	2 cut(s)	147, 813
HpyF10VI	GCNNNNNNNGC	4 cut(s)	161, 681, 953, 974
HpyF3I	CTNAG	4 cut(s)	89, 114, 1790, 1807
HpySE526I	ACGT	2 cut(s)	147, 813
Hsp92I	GRCGYC	1 cut(s)	1402
Hsp92II	CATG	9 cut(s)	27, 163, 265, 350, 362, 601, 1015, 1123, 1142
HspAI	GCGC	8 cut(s)	138, 153, 185, 228, 252, 1221, 1402, 1484
KasI	GGCGCC	1 cut(s)	1401
Kpn2I	TCCGGA	2 cut(s)	96, 550
KspAI	GTTAAC	1 cut(s)	72
Kzo9I	GATC	3 cut(s)	793, 1526, 1651
LmnI	GCTCC	6 cut(s)	259, 335, 635, 730, 1117, 1555
Lsp1109I	GCAGC	6 cut(s)	374, 872, 964, 983, 986, 1786
LweI	GCATC	9 cut(s)	115, 274, 544, 829, 872, 1132, 1147, 1402, 1436
MaeI	CTAG	4 cut(s)	887, 909, 933, 1643
MaeII	ACGT	2 cut(s)	147, 813
MaeIII	GTNAC	3 cut(s)	475, 1333, 1386
MalI	GATC	3 cut(s)	795, 1528, 1653
MboI	GATC	3 cut(s)	793, 1526, 1651
MboII	GAAGA	8 cut(s)	12, 322, 548, 883, 1217, 1271, 1696, 1755
MflI	RGATCY	1 cut(s)	1651
MhlI	GDGCHC	8 cut(s)	115, 571, 640, 658, 1072, 1090, 1114, 1516
MluCI	AATT	7 cut(s)	381, 391, 715, 1059, 1284, 1700, 1867
Mly113I	GGCGCC	1 cut(s)	1402
MlyI	GAGTC	3 cut(s)	87, 1370, 1613
MmeI	TCCRAC	1 cut(s)	264
Mph1103I	ATGCAT	1 cut(s)	844
MroI	TCCGGA	2 cut(s)	96, 550
MseI	TTAA	4 cut(s)	71, 390, 1211, 1436
MspA1I	CMGCKG	1 cut(s)	977
MspI	CCGG	6 cut(s)	97, 480, 507, 551, 672, 1364
MspR9I	CCNGG	6 cut(s)	507, 1055, 1365, 1472, 1546, 1656
MvaI	CCWGG	4 cut(s)	1055, 1472, 1546, 1656
MvnI	CGCG	5 cut(s)	140, 153, 185, 228, 1244
MwoI	GCNNNNNNNGC	4 cut(s)	161, 681, 953, 974
NarI	GGCGCC	1 cut(s)	1402
NciI	CCSGG	2 cut(s)	507, 1365
NcoI	CCATGG	1 cut(s)	159
NdeI	CATATG	4 cut(s)	433, 1153, 1291, 1850
NdeII	GATC	3 cut(s)	793, 1526, 1651
NlaIII	CATG	9 cut(s)	27, 163, 265, 350, 362, 601, 1015, 1123, 1142
NlaIV	GGNNCC	9 cut(s)	168, 221, 331, 637, 1403, 1543, 1557, 1653, 1661
NmuCI	GTSAC	3 cut(s)	475, 1333, 1386
NsiI	ATGCAT	1 cut(s)	844
PfeI	GAWTC	4 cut(s)	518, 527, 746, 988
Pfl23II	CGTACG	1 cut(s)	148
PflFI	GACNNNGTC	1 cut(s)	79
PflMI	CCANNNNNTGG	2 cut(s)	646, 1504
PkrI	GCNGC	8 cut(s)	157, 364, 862, 976, 979, 998, 1018, 1801
PleI	GAGTC	3 cut(s)	87, 1370, 1612
PluTI	GGCGCC	1 cut(s)	1405
PpsI	GAGTC	3 cut(s)	87, 1370, 1612
PpuMI	RGGWCCY	1 cut(s)	220
PshAI	GACNNNNGTC	1 cut(s)	935
Psp124BI	GAGCTC	1 cut(s)	115
Psp5II	RGGWCCY	1 cut(s)	220
Psp6I	CCWGG	4 cut(s)	1053, 1470, 1544, 1654
PspEI	GGTNACC	1 cut(s)	475
PspFI	CCCAGC	2 cut(s)	455, 1313
PspGI	CCWGG	4 cut(s)	1053, 1470, 1544, 1654
PspLI	CGTACG	1 cut(s)	148
PspN4I	GGNNCC	9 cut(s)	168, 221, 331, 637, 1403, 1543, 1557, 1653, 1661
PspPPI	RGGWCCY	1 cut(s)	220
PstNI	CAGNNNCTG	1 cut(s)	193
PsuI	RGATCY	1 cut(s)	1651
PsyI	GACNNNGTC	1 cut(s)	79
PvuII	CAGCTG	1 cut(s)	977
RsaI	GTAC	2 cut(s)	150, 191
RsaNI	GTAC	2 cut(s)	149, 190
SacI	GAGCTC	1 cut(s)	115
SaqAI	TTAA	4 cut(s)	71, 390, 1211, 1436
SatI	GCNGC	8 cut(s)	156, 363, 861, 975, 978, 997, 1017, 1800
Sau3AI	GATC	3 cut(s)	793, 1526, 1651
SchI	GAGTC	3 cut(s)	87, 1370, 1613
ScrFI	CCNGG	6 cut(s)	507, 1055, 1365, 1472, 1546, 1656
SduI	GDGCHC	8 cut(s)	115, 571, 640, 658, 1072, 1090, 1114, 1516
SfaNI	GCATC	9 cut(s)	115, 274, 544, 829, 872, 1132, 1147, 1402, 1436
SfcI	CTRYAG	1 cut(s)	1096
SfoI	GGCGCC	1 cut(s)	1403
SinI	GGWCC	4 cut(s)	220, 669, 1343, 1541
SmlI	CTYRAG	2 cut(s)	58, 914
SmoI	CTYRAG	2 cut(s)	58, 914
SpeI	ACTAGT	1 cut(s)	932
Sse9I	AATT	7 cut(s)	381, 391, 715, 1059, 1284, 1700, 1867
SsiI	CCGC	9 cut(s)	156, 164, 226, 244, 595, 805, 980, 1016, 1244
SspDI	GGCGCC	1 cut(s)	1401
SspMI	CTAG	4 cut(s)	887, 909, 933, 1643
SstI	GAGCTC	1 cut(s)	115
StyD4I	CCNGG	6 cut(s)	505, 1053, 1363, 1470, 1544, 1654
StyI	CCWWGG	2 cut(s)	159, 686
TaaI	ACNGT	5 cut(s)	630, 1026, 1109, 1454, 1464
TaiI	ACGT	2 cut(s)	150, 816
TaqI	TCGA	4 cut(s)	109, 204, 471, 1674
TaqII	GACCGA	1 cut(s)	137
TasI	AATT	7 cut(s)	381, 391, 715, 1059, 1284, 1700, 1867
TauI	GCSGC	2 cut(s)	158, 1019
TfiI	GAWTC	4 cut(s)	518, 527, 746, 988
Tru1I	TTAA	4 cut(s)	71, 390, 1211, 1436
Tru9I	TTAA	4 cut(s)	71, 390, 1211, 1436
TscAI	CASTG	2 cut(s)	633, 1342
TseFI	GTSAC	3 cut(s)	475, 1333, 1386
TseI	GCWGC	6 cut(s)	362, 860, 974, 977, 996, 1799
Tsp45I	GTSAC	3 cut(s)	475, 1333, 1386
TspDTI	ATGAA	4 cut(s)	12, 510, 708, 1713
TspRI	CASTG	2 cut(s)	633, 1342
Tth111I	GACNNNGTC	1 cut(s)	79
Van91I	CCANNNNNTGG	2 cut(s)	646, 1504
VneI	GTGCAC	1 cut(s)	567
VpaK11BI	GGWCC	4 cut(s)	220, 669, 1343, 1541
XagI	CCTNNNNNAGG	2 cut(s)	537, 1764
XapI	RAATTY	1 cut(s)	1700
XmiI	GTMKAC	1 cut(s)	180
XspI	CTAG	4 cut(s)	887, 909, 933, 1643
Zsp2I	ATGCAT	1 cut(s)	844

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.