Rmu_sc0009113.1_g000007

Belongs to the peroxidase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009113.1
Physical Location & Seq
Reverse (-)
34075 .. 36988
2914 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009113.1_g000007.1.cds

Sequence Viewer

Length: 1281 bp
atgctttggctcttcaattttggtgcaggtgcaccacatttgaaggacatcttttaccgcatgggtctgtctgataaggacattgtggcactgtctggagcccatacattgggtagagcacatccagaaaggtccggctttgatggcccttggacaaaagagcctctgaagtttgacaattcatactttgtggagctactgaaaggagaatcagaggggctgttgaaactacccacagacaaggctttattggatgatcctgcgttccgcccctacgttgaactttatgcaaaggatgaggatgcatttttcagagactatgcagcatcacagaagaaactatcagagctaggcttcactccacctccatctagtctcaaggaagctgaaaagactagtgtcgtagtggcacaaagtgctgtgggagttgcagttgcagctgcggaaaagcaactctacctccaggaaattgagagggctcgccaagaccttcgtgctcttatctacagcaagaactgcgctcctatcatgcttcgtttagcgtggcatgatgctggaacatatgatgcttttacaaaaactggagggcctaatggctcaatcaggaataaggaagagttaaagcatagcgcaaataatggattgaaaatcgcggttgacttatgtgaagaagtgaaggccaagcacccaaaaattacatatgctgacctctaccagcttgctggggttgttgcaatagaggtcactggaggtccacctattgactttgttccgggtagaaaggactcaaagcagtcaccaccagaagggcgccttccagatgccaaactcggtgcatcacatttaagggatactttctaccgtatgggactgtctgaccaggacattgtggcgctatcaggaggccacacattgggaagggcacatcaggagagatcaggctttgatggaccctggacaaaggagcctgcgaagtttgacaactcatactttgtggaactattgaaaggggagtcagggggactgctgaaacttcccacagacaaggctctagtggaggatcctgggttccatcactttgtcgaactatatgcaaacgatagggatgaattcttcagagactatgcagtatcacacaagaaactatcagaacttggctttagcccaccttcttcaggtcagaaggtaggacttgctcttagcattgctgctgtcttagttctggcagttgtgtgggagttgacagacccgtttctcatatggaaacaatacaataattag

Protein Analysis

426

Amino Acids

47.04

Weight (kDa)

5.99

Isoelectric Point (pI)

38.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 17
Acc36I ACCTGC 1 cut(s) 17
AccB1I GGYRCC 1 cut(s) 810
AccB7I CCANNNNNTGG 2 cut(s) 109, 913
AccII CGCG 1 cut(s) 653
AciI CCGC 4 cut(s) 58, 268, 443, 653
AclWI GGATC 3 cut(s) 251, 1055, 1068
AcsI RAATTY 1 cut(s) 1109
AcuI CTGAAG 3 cut(s) 188, 1099, 1158
AcyI GRCGYC 1 cut(s) 811
AdeI CACNNNGTG 1 cut(s) 416
AfiI CCNNNNNNNGG 4 cut(s) 109, 806, 913, 1175
AgsI TTSAA 6 cut(s) 16, 43, 226, 281, 646, 1006
AhlI ACTAGT 1 cut(s) 395
AjnI CCWGG 4 cut(s) 462, 879, 953, 1063
AloI GAACNNNNNNTCC 2 cut(s) 1052, 1084
AluBI AGCT 5 cut(s) 196, 349, 386, 440, 718
AluI AGCT 5 cut(s) 196, 349, 386, 440, 718
Alw21I GWGCWC 3 cut(s) 34, 121, 499
Alw26I GTCTC 3 cut(s) 309, 380, 1113
Alw44I GTGCAC 1 cut(s) 30
AlwI GGATC 3 cut(s) 251, 1055, 1068
AoxI GGCC 4 cut(s) 145, 587, 678, 904
ApaLI GTGCAC 1 cut(s) 30
ApeKI GCWGC 4 cut(s) 323, 437, 440, 1208
ApoI RAATTY 1 cut(s) 1109
AspLEI GCGC 4 cut(s) 521, 632, 813, 895
AspS9I GGNCC 5 cut(s) 132, 146, 587, 752, 950
AsuC2I CCSGG 1 cut(s) 774
AsuHPI GGTGA 1 cut(s) 789
AvaII GGWCC 3 cut(s) 132, 752, 950
BaeGI GKGCMC 2 cut(s) 34, 925
BamHI GGATCC 1 cut(s) 1060
BanI GGYRCC 1 cut(s) 810
BanII GRGCYC 2 cut(s) 103, 481
Bbv12I GWGCWC 3 cut(s) 34, 121, 499
BbvI GCAGC 4 cut(s) 335, 427, 449, 1195
BccI CCATC 4 cut(s) 137, 376, 941, 1080
BcgI CGANNNNNNTGC 2 cut(s) 1073, 1107
BciT130I CCWGG 4 cut(s) 464, 881, 955, 1065
BciVI GTATCC 1 cut(s) 844
BcnI CCSGG 1 cut(s) 774
BcoDI GTCTC 3 cut(s) 309, 380, 1113
BcuI ACTAGT 1 cut(s) 395
BfaI CTAG 4 cut(s) 350, 372, 396, 1052
BfmI CTRYAG 1 cut(s) 505
BfoI RGCGCY 2 cut(s) 814, 896
BfuAI ACCTGC 1 cut(s) 17
BfuI GTATCC 1 cut(s) 844
BisI GCNGC 4 cut(s) 324, 438, 441, 1209
BlsI GCNGC 4 cut(s) 325, 439, 442, 1210
Bme1390I CCNGG 5 cut(s) 464, 774, 881, 955, 1065
Bme18I GGWCC 3 cut(s) 132, 752, 950
BmgT120I GGNCC 5 cut(s) 132, 146, 587, 752, 950
BmiI GGNNCC 6 cut(s) 100, 812, 952, 966, 1062, 1070
BmrFI CCNGG 5 cut(s) 464, 774, 881, 955, 1065
BmsI GCATC 6 cut(s) 292, 335, 541, 556, 811, 845
BoxI GACNNNNGTC 1 cut(s) 398
BpmI CTGGAG 4 cut(s) 117, 446, 603, 768
BpuEI CTTGAG 1 cut(s) 362
BpuMI CCSGG 1 cut(s) 774
BsaHI GRCGYC 1 cut(s) 811
BsaJI CCNNGG 3 cut(s) 149, 953, 1064
BsaXI ACNNNNNCTCC 6 cut(s) 349, 379, 417, 444, 447, 474
Bsc4I CCNNNNNNNGG 4 cut(s) 109, 806, 913, 1175
Bse1I ACTGG 2 cut(s) 586, 751
Bse3DI GCAATG 1 cut(s) 1203
BseBI CCWGG 4 cut(s) 464, 881, 955, 1065
BseDI CCNNGG 3 cut(s) 149, 953, 1064
BseGI GGATG 5 cut(s) 121, 259, 301, 307, 1111
BseLI CCNNNNNNNGG 4 cut(s) 109, 806, 913, 1175
BseMI GCAATG 1 cut(s) 1203
BseNI ACTGG 2 cut(s) 586, 751
BseSI GKGCMC 2 cut(s) 34, 925
BseXI GCAGC 4 cut(s) 335, 427, 449, 1195
BseYI CCCAGC 1 cut(s) 722
BsgI GTGCAG 1 cut(s) 45
Bsh1236I CGCG 1 cut(s) 653
BshFI GGCC 4 cut(s) 147, 589, 680, 906
BshNI GGYRCC 1 cut(s) 810
BsiHKAI GWGCWC 3 cut(s) 34, 121, 499
BsiSI CCGG 2 cut(s) 135, 773
BslFI GGGAC 2 cut(s) 882, 1035
BslI CCNNNNNNNGG 4 cut(s) 109, 806, 913, 1175
BsmAI GTCTC 3 cut(s) 309, 380, 1113
BsmFI GGGAC 2 cut(s) 882, 1035
BsnI GGCC 4 cut(s) 147, 589, 680, 906
Bsp1286I GDGCHC 6 cut(s) 34, 103, 121, 481, 499, 925
Bsp143I GATC 3 cut(s) 256, 935, 1060
BspACI CCGC 4 cut(s) 58, 268, 443, 653
BspANI GGCC 4 cut(s) 147, 589, 680, 906
BspFNI CGCG 1 cut(s) 653
BspLI GGNNCC 6 cut(s) 100, 812, 952, 966, 1062, 1070
BspMI ACCTGC 1 cut(s) 17
BspPI GGATC 3 cut(s) 251, 1055, 1068
BspQI GCTCTTC 1 cut(s) 17
BspT107I GGYRCC 1 cut(s) 810
BsrDI GCAATG 1 cut(s) 1203
BsrI ACTGG 2 cut(s) 586, 751
BssECI CCNNGG 3 cut(s) 149, 953, 1064
BssMI GATC 3 cut(s) 256, 935, 1060
BssNI GRCGYC 1 cut(s) 811
BssT1I CCWWGG 1 cut(s) 149
Bst2UI CCWGG 4 cut(s) 464, 881, 955, 1065
Bst4CI ACNGT 3 cut(s) 93, 863, 873
Bst6I CTCTTC 2 cut(s) 17, 609
BstACI GRCGYC 1 cut(s) 811
BstAPI GCANNNNNTGC 2 cut(s) 416, 516
BstC8I GCNNGC 3 cut(s) 481, 720, 969
BstDEI CTNAG 2 cut(s) 1199, 1216
BstENI CCTNNNNNAGG 1 cut(s) 1173
BstF5I GGATG 5 cut(s) 121, 259, 301, 307, 1111
BstFNI CGCG 1 cut(s) 653
BstH2I RGCGCY 2 cut(s) 814, 896
BstHHI GCGC 4 cut(s) 521, 632, 813, 895
BstKTI GATC 3 cut(s) 259, 938, 1063
BstMAI GTCTC 3 cut(s) 309, 380, 1113
BstMBI GATC 3 cut(s) 256, 935, 1060
BstMWI GCNNNNNNNGC 4 cut(s) 144, 416, 437, 516
BstNI CCWGG 4 cut(s) 464, 881, 955, 1065
BstPAI GACNNNNGTC 1 cut(s) 398
BstSCI CCNGG 5 cut(s) 462, 772, 879, 953, 1063
BstSFI CTRYAG 1 cut(s) 505
BstSLI GKGCMC 2 cut(s) 34, 925
BstUI CGCG 1 cut(s) 653
BstV1I GCAGC 4 cut(s) 335, 427, 449, 1195
BstX2I RGATCY 1 cut(s) 1060
BstXI CCANNNNNNTGG 1 cut(s) 722
BstYI RGATCY 1 cut(s) 1060
BsuI GTATCC 1 cut(s) 844
BsuRI GGCC 4 cut(s) 147, 589, 680, 906
BtsCI GGATG 5 cut(s) 121, 259, 301, 307, 1111
BtsIMutI CAGTG 2 cut(s) 89, 744
BveI ACCTGC 1 cut(s) 17
Cac8I GCNNGC 3 cut(s) 481, 720, 969
CfoI GCGC 4 cut(s) 521, 632, 813, 895
Cfr13I GGNCC 5 cut(s) 132, 146, 587, 752, 950
CviAII CATG 3 cut(s) 61, 529, 548
DdeI CTNAG 2 cut(s) 1199, 1216
DinI GGCGCC 1 cut(s) 812
DpnI GATC 3 cut(s) 258, 937, 1062
DpnII GATC 3 cut(s) 256, 935, 1060
DraIII CACNNNGTG 1 cut(s) 416
Eam1104I CTCTTC 2 cut(s) 17, 609
EarI CTCTTC 2 cut(s) 17, 609
EciI GGCGGA 1 cut(s) 257
Eco130I CCWWGG 1 cut(s) 149
Eco24I GRGCYC 2 cut(s) 103, 481
Eco47I GGWCC 3 cut(s) 132, 752, 950
Eco57I CTGAAG 3 cut(s) 188, 1099, 1158
EcoNI CCTNNNNNAGG 1 cut(s) 1173
EcoO109I RGGNCCY 1 cut(s) 587
EcoRI GAATTC 1 cut(s) 1109
EcoRII CCWGG 4 cut(s) 462, 879, 953, 1063
EcoT14I CCWWGG 1 cut(s) 149
EcoT22I ATGCAT 1 cut(s) 307
EcoT38I GRGCYC 2 cut(s) 103, 481
EgeI GGCGCC 1 cut(s) 812
EheI GGCGCC 1 cut(s) 812
ErhI CCWWGG 1 cut(s) 149
FaeI CATG 3 cut(s) 64, 532, 551
FalI AAGNNNNNCTT 6 cut(s) 35, 67, 798, 830, 838, 870
FaqI GGGAC 2 cut(s) 882, 1035
FatI CATG 3 cut(s) 60, 528, 547
FauNDI CATATG 3 cut(s) 562, 700, 1259
Fnu4HI GCNGC 4 cut(s) 324, 438, 441, 1209
FokI GGATG 5 cut(s) 108, 266, 308, 314, 1118
FriOI GRGCYC 2 cut(s) 103, 481
Fsp4HI GCNGC 4 cut(s) 324, 438, 441, 1209
FspBI CTAG 4 cut(s) 350, 372, 396, 1052
GlaI GCGC 4 cut(s) 520, 631, 812, 894
GluI GCNGC 4 cut(s) 324, 438, 441, 1209
GsaI CCCAGC 1 cut(s) 726
GsuI CTGGAG 4 cut(s) 117, 446, 603, 768
HaeII RGCGCY 2 cut(s) 814, 896
HaeIII GGCC 4 cut(s) 147, 589, 680, 906
HapII CCGG 2 cut(s) 135, 773
HhaI GCGC 4 cut(s) 521, 632, 813, 895
Hin1I GRCGYC 1 cut(s) 811
Hin1II CATG 3 cut(s) 64, 532, 551
Hin6I GCGC 4 cut(s) 519, 630, 811, 893
HinP1I GCGC 4 cut(s) 519, 630, 811, 893
HincII GTYRAC 2 cut(s) 658, 1242
HindII GTYRAC 2 cut(s) 658, 1242
HinfI GANTC 3 cut(s) 209, 785, 1013
HpaII CCGG 2 cut(s) 135, 773
HphI GGTGA 1 cut(s) 789
Hpy166II GTNNAC 4 cut(s) 32, 658, 755, 1242
Hpy188I TCNGA 9 cut(s) 73, 168, 214, 314, 346, 877, 1118, 1150, 1182
Hpy188III TCNNGA 6 cut(s) 96, 125, 604, 818, 900, 929
Hpy8I GTNNAC 4 cut(s) 32, 658, 755, 1242
HpyAV CCTTC 8 cut(s) 37, 500, 670, 800, 824, 912, 1177, 1179
HpyCH4III ACNGT 3 cut(s) 93, 863, 873
HpyCH4IV ACGT 1 cut(s) 276
HpyF10VI GCNNNNNNNGC 4 cut(s) 144, 416, 437, 516
HpyF3I CTNAG 2 cut(s) 1199, 1216
HpySE526I ACGT 1 cut(s) 276
Hsp92I GRCGYC 1 cut(s) 811
Hsp92II CATG 3 cut(s) 64, 532, 551
HspAI GCGC 4 cut(s) 519, 630, 811, 893
KasI GGCGCC 1 cut(s) 810
Kzo9I GATC 3 cut(s) 256, 935, 1060
LguI GCTCTTC 1 cut(s) 17
LmnI GCTCC 4 cut(s) 98, 193, 526, 964
Lsp1109I GCAGC 4 cut(s) 335, 427, 449, 1195
LweI GCATC 6 cut(s) 292, 335, 541, 556, 811, 845
MaeI CTAG 4 cut(s) 350, 372, 396, 1052
MaeII ACGT 1 cut(s) 276
MaeIII GTNAC 2 cut(s) 742, 795
MalI GATC 3 cut(s) 258, 937, 1062
MboI GATC 3 cut(s) 256, 935, 1060
MboII GAAGA 6 cut(s) 4, 346, 626, 680, 1105, 1164
MflI RGATCY 1 cut(s) 1060
MhlI GDGCHC 6 cut(s) 34, 103, 121, 481, 499, 925
MluCI AATT 6 cut(s) 16, 178, 468, 693, 1109, 1276
Mly113I GGCGCC 1 cut(s) 811
MlyI GAGTC 2 cut(s) 779, 1022
Mph1103I ATGCAT 1 cut(s) 307
MseI TTAA 2 cut(s) 620, 845
MspA1I CMGCKG 1 cut(s) 440
MspI CCGG 2 cut(s) 135, 773
MspR9I CCNGG 5 cut(s) 464, 774, 881, 955, 1065
MvaI CCWGG 4 cut(s) 464, 881, 955, 1065
MvnI CGCG 1 cut(s) 653
MwoI GCNNNNNNNGC 4 cut(s) 144, 416, 437, 516
NarI GGCGCC 1 cut(s) 811
NciI CCSGG 1 cut(s) 774
NdeI CATATG 3 cut(s) 562, 700, 1259
NdeII GATC 3 cut(s) 256, 935, 1060
NlaIII CATG 3 cut(s) 64, 532, 551
NlaIV GGNNCC 6 cut(s) 100, 812, 952, 966, 1062, 1070
NmuCI GTSAC 2 cut(s) 742, 795
NsiI ATGCAT 1 cut(s) 307
PaqCI CACCTGC 1 cut(s) 17
PciSI GCTCTTC 1 cut(s) 17
PfeI GAWTC 1 cut(s) 209
PflMI CCANNNNNTGG 2 cut(s) 109, 913
PfoI TCCNGGA 1 cut(s) 462
PkrI GCNGC 4 cut(s) 325, 439, 442, 1210
PleI GAGTC 2 cut(s) 779, 1021
PluTI GGCGCC 1 cut(s) 814
PpsI GAGTC 2 cut(s) 779, 1021
PshAI GACNNNNGTC 1 cut(s) 398
Psp6I CCWGG 4 cut(s) 462, 879, 953, 1063
PspFI CCCAGC 1 cut(s) 722
PspGI CCWGG 4 cut(s) 462, 879, 953, 1063
PspN4I GGNNCC 6 cut(s) 100, 812, 952, 966, 1062, 1070
PspPI GGNCC 5 cut(s) 132, 146, 587, 752, 950
PsuI RGATCY 1 cut(s) 1060
PvuII CAGCTG 1 cut(s) 440
SapI GCTCTTC 1 cut(s) 17
SaqAI TTAA 2 cut(s) 620, 845
SatI GCNGC 4 cut(s) 324, 438, 441, 1209
Sau3AI GATC 3 cut(s) 256, 935, 1060
Sau96I GGNCC 5 cut(s) 132, 146, 587, 752, 950
SchI GAGTC 2 cut(s) 779, 1022
ScrFI CCNGG 5 cut(s) 464, 774, 881, 955, 1065
SduI GDGCHC 6 cut(s) 34, 103, 121, 481, 499, 925
SfaNI GCATC 6 cut(s) 292, 335, 541, 556, 811, 845
SfcI CTRYAG 1 cut(s) 505
SfoI GGCGCC 1 cut(s) 812
SinI GGWCC 3 cut(s) 132, 752, 950
SmlI CTYRAG 1 cut(s) 377
SmoI CTYRAG 1 cut(s) 377
SpeI ACTAGT 1 cut(s) 395
Sse9I AATT 6 cut(s) 16, 178, 468, 693, 1109, 1276
SsiI CCGC 4 cut(s) 58, 268, 443, 653
SspDI GGCGCC 1 cut(s) 810
SspMI CTAG 4 cut(s) 350, 372, 396, 1052
StyD4I CCNGG 5 cut(s) 462, 772, 879, 953, 1063
StyI CCWWGG 1 cut(s) 149
TaaI ACNGT 3 cut(s) 93, 863, 873
TaiI ACGT 1 cut(s) 279
TaqI TCGA 1 cut(s) 1083
TasI AATT 6 cut(s) 16, 178, 468, 693, 1109, 1276
TfiI GAWTC 1 cut(s) 209
Tru1I TTAA 2 cut(s) 620, 845
Tru9I TTAA 2 cut(s) 620, 845
TscAI CASTG 2 cut(s) 96, 751
TseFI GTSAC 2 cut(s) 742, 795
TseI GCWGC 4 cut(s) 323, 437, 440, 1208
Tsp45I GTSAC 2 cut(s) 742, 795
TspDTI ATGAA 2 cut(s) 171, 1122
TspRI CASTG 2 cut(s) 96, 751
Van91I CCANNNNNTGG 2 cut(s) 109, 913
VneI GTGCAC 1 cut(s) 30
VpaK11BI GGWCC 3 cut(s) 132, 752, 950
XagI CCTNNNNNAGG 1 cut(s) 1173
XapI RAATTY 1 cut(s) 1109
XspI CTAG 4 cut(s) 350, 372, 396, 1052
Zsp2I ATGCAT 1 cut(s) 307
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.