Prupe.7G171700_v2.0.a1
ERF Family

Belongs to the small GTPase superfamily. Rho family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0005576
Physical Location & Seq
Forward (+)
17303971 .. 17307256
3286 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G171700.1

Sequence Viewer

Length: 675 bp
ATGAGCGCGTCCAGGTTCATAAAGTGCGTCACGGTTGGGGACGGGGCTGTGGGCAAGACTTGTCTGCTTATCTCCTACACCAGCAACACCTTCCCCACCGATTACGTGCCAACTGTTTTCGACAATTTCAGTGCAAATGTGGTCGTCAATGGAAGCACTGTTAACCTGGGGTTATGGGATACAGCTGGACAGGAGGACTATAATAGATTAAGACCTTTGAGTTATCGCGGTGCTGATGTTTTCATACTGGCGTTCTCTCTCATCAGCAAGGCCAGCTATGAAAACGTGTCCAAGAAGTGGATCCCAGAATTGAAGCATTATGCACCCGGTGTTCCGATCATTCTTGTTGGAACAAAGCTTGATCTTCGGGACGATAAGCAGTTCTTTATTGACCATCCGGGTGCTGTGCCAATTACCACAGCTCAAGAAGCTAATTGGAGCACCAGCATATATCGAATGCAGTTCAAAAACACAGCAGAATGTGAAAGGGGTCTTCGATGCAGCAATAAGGGTTGTCCTTCAACCTCCGAAGCAGAAGAAAAAGAAAGGCAAAGGGCAGAAGGCATGCTCCATATTGTGATTGGAAATATGTGTAAAAAGATAATGACCAGCCAATCTGCCTGTATTCCCTCCCTCCCACCCCTTTCTCCCCTAATATTTTCCCTTTTGTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ras

Protein Analysis

225

Amino Acids

24.7

Weight (kDa)

8.13

Isoelectric Point (pI)

36.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 297
AccII CGCG 2 cut(s) 8, 228
AciI CCGC 1 cut(s) 228
AclWI GGATC 2 cut(s) 295, 308
AdeI CACNNNGTG 1 cut(s) 329
AfiI CCNNNNNNNGG 1 cut(s) 297
AflIII ACRYGT 1 cut(s) 285
AgsI TTSAA 3 cut(s) 313, 466, 522
AjnI CCWGG 2 cut(s) 11, 165
AluBI AGCT 5 cut(s) 185, 276, 358, 422, 431
AluI AGCT 5 cut(s) 185, 276, 358, 422, 431
Alw21I GWGCWC 1 cut(s) 443
AlwI GGATC 2 cut(s) 295, 308
AoxI GGCC 1 cut(s) 270
ApeKI GCWGC 1 cut(s) 501
AspLEI GCGC 1 cut(s) 8
AsuC2I CCSGG 2 cut(s) 327, 399
BamHI GGATCC 1 cut(s) 300
BbsI GAAGAC 1 cut(s) 485
Bbv12I GWGCWC 1 cut(s) 443
BbvI GCAGC 1 cut(s) 513
BccI CCATC 1 cut(s) 402
BciT130I CCWGG 2 cut(s) 13, 167
BciVI GTATCC 1 cut(s) 172
BcnI CCSGG 2 cut(s) 327, 399
BfuI GTATCC 1 cut(s) 172
BisI GCNGC 1 cut(s) 502
BlsI GCNGC 1 cut(s) 503
Bme1390I CCNGG 4 cut(s) 13, 167, 327, 399
BmiI GGNNCC 1 cut(s) 302
BmrFI CCNGG 4 cut(s) 13, 167, 327, 399
BmsI GCATC 1 cut(s) 488
BpiI GAAGAC 1 cut(s) 485
BpuEI CTTGAG 1 cut(s) 408
BpuMI CCSGG 2 cut(s) 327, 399
BsaAI YACGTR 1 cut(s) 106
BsaJI CCNNGG 1 cut(s) 166
Bsc4I CCNNNNNNNGG 1 cut(s) 297
Bse1I ACTGG 1 cut(s) 252
BseBI CCWGG 2 cut(s) 13, 167
BseDI CCNNGG 1 cut(s) 166
BseGI GGATG 1 cut(s) 394
BseLI CCNNNNNNNGG 1 cut(s) 297
BseNI ACTGG 1 cut(s) 252
BseXI GCAGC 1 cut(s) 513
Bsh1236I CGCG 2 cut(s) 8, 228
BshFI GGCC 1 cut(s) 272
BsiHKAI GWGCWC 1 cut(s) 443
BsiSI CCGG 2 cut(s) 327, 398
BslFI GGGAC 2 cut(s) 53, 383
BslI CCNNNNNNNGG 1 cut(s) 297
BsmFI GGGAC 2 cut(s) 53, 383
BsmI GAATGC 1 cut(s) 462
BsnI GGCC 1 cut(s) 272
Bsp1286I GDGCHC 1 cut(s) 443
Bsp143I GATC 3 cut(s) 300, 336, 361
BspACI CCGC 1 cut(s) 228
BspANI GGCC 1 cut(s) 272
BspFNI CGCG 2 cut(s) 8, 228
BspLI GGNNCC 1 cut(s) 302
BspPI GGATC 2 cut(s) 295, 308
BsrI ACTGG 1 cut(s) 252
BssECI CCNNGG 1 cut(s) 166
BssMI GATC 3 cut(s) 300, 336, 361
Bst2UI CCWGG 2 cut(s) 13, 167
Bst4CI ACNGT 3 cut(s) 34, 115, 160
BstBAI YACGTR 1 cut(s) 106
BstC8I GCNNGC 2 cut(s) 274, 566
BstF5I GGATG 1 cut(s) 394
BstFNI CGCG 2 cut(s) 8, 228
BstHHI GCGC 1 cut(s) 8
BstKTI GATC 3 cut(s) 303, 339, 364
BstMBI GATC 3 cut(s) 300, 336, 361
BstMWI GCNNNNNNNGC 2 cut(s) 273, 428
BstNI CCWGG 2 cut(s) 13, 167
BstNSI RCATGY 1 cut(s) 568
BstSCI CCNGG 4 cut(s) 11, 165, 325, 397
BstUI CGCG 2 cut(s) 8, 228
BstV1I GCAGC 1 cut(s) 513
BstV2I GAAGAC 1 cut(s) 485
BstX2I RGATCY 1 cut(s) 300
BstYI RGATCY 1 cut(s) 300
BsuI GTATCC 1 cut(s) 172
BsuRI GGCC 1 cut(s) 272
BtsCI GGATG 1 cut(s) 394
BtsIMutI CAGTG 2 cut(s) 136, 156
Cac8I GCNNGC 2 cut(s) 274, 566
CfoI GCGC 1 cut(s) 8
CseI GACGC 1 cut(s) 16
CviAII CATG 1 cut(s) 565
CviJI RGCY 8 cut(s) 47, 185, 272, 276, 358, 422, 431, 612
CviKI_1 RGCY 8 cut(s) 47, 185, 272, 276, 358, 422, 431, 612
DpnI GATC 3 cut(s) 302, 338, 363
DpnII GATC 3 cut(s) 300, 336, 361
DraIII CACNNNGTG 1 cut(s) 329
EcoRII CCWGG 2 cut(s) 11, 165
FaeI CATG 1 cut(s) 568
FalI AAGNNNNNCTT 2 cut(s) 368, 400
FaqI GGGAC 2 cut(s) 53, 383
FatI CATG 1 cut(s) 564
Fnu4HI GCNGC 1 cut(s) 502
FokI GGATG 1 cut(s) 381
Fsp4HI GCNGC 1 cut(s) 502
GlaI GCGC 1 cut(s) 7
GluI GCNGC 1 cut(s) 502
HaeIII GGCC 1 cut(s) 272
HapII CCGG 2 cut(s) 327, 398
HgaI GACGC 1 cut(s) 16
HhaI GCGC 1 cut(s) 8
Hin1II CATG 1 cut(s) 568
Hin6I GCGC 1 cut(s) 6
HinP1I GCGC 1 cut(s) 6
HincII GTYRAC 1 cut(s) 163
HindII GTYRAC 1 cut(s) 163
HindIII AAGCTT 1 cut(s) 356
HpaI GTTAAC 1 cut(s) 163
HpaII CCGG 2 cut(s) 327, 398
Hpy166II GTNNAC 1 cut(s) 163
Hpy188I TCNGA 2 cut(s) 336, 529
Hpy188III TCNNGA 3 cut(s) 368, 425, 672
Hpy8I GTNNAC 1 cut(s) 163
HpyAV CCTTC 3 cut(s) 100, 528, 554
HpyCH4III ACNGT 3 cut(s) 34, 115, 160
HpyCH4IV ACGT 2 cut(s) 105, 285
HpyCH4V TGCA 4 cut(s) 134, 323, 460, 501
HpyF10VI GCNNNNNNNGC 2 cut(s) 273, 428
HpySE526I ACGT 2 cut(s) 105, 285
Hsp92II CATG 1 cut(s) 568
HspAI GCGC 1 cut(s) 6
KspAI GTTAAC 1 cut(s) 163
Kzo9I GATC 3 cut(s) 300, 336, 361
LmnI GCTCC 2 cut(s) 438, 573
Lsp1109I GCAGC 1 cut(s) 513
LweI GCATC 1 cut(s) 488
MaeII ACGT 2 cut(s) 105, 285
MaeIII GTNAC 1 cut(s) 28
MalI GATC 3 cut(s) 302, 338, 363
MboI GATC 3 cut(s) 300, 336, 361
MboII GAAGA 3 cut(s) 356, 485, 548
MflI RGATCY 1 cut(s) 300
MhlI GDGCHC 1 cut(s) 443
MluCI AATT 4 cut(s) 124, 308, 411, 433
MmeI TCCRAC 1 cut(s) 328
MnlI CCTC 4 cut(s) 187, 535, 640, 644
MseI TTAA 2 cut(s) 162, 209
MslI CAYNNNNRTG 1 cut(s) 399
MspA1I CMGCKG 1 cut(s) 185
MspI CCGG 2 cut(s) 327, 398
MspR9I CCNGG 4 cut(s) 13, 167, 327, 399
Mva1269I GAATGC 1 cut(s) 462
MvaI CCWGG 2 cut(s) 13, 167
MvnI CGCG 2 cut(s) 8, 228
MwoI GCNNNNNNNGC 2 cut(s) 273, 428
NciI CCSGG 2 cut(s) 327, 399
NdeII GATC 3 cut(s) 300, 336, 361
NlaIII CATG 1 cut(s) 568
NlaIV GGNNCC 1 cut(s) 302
NmuCI GTSAC 1 cut(s) 28
NspI RCATGY 1 cut(s) 568
PaeI GCATGC 1 cut(s) 568
PctI GAATGC 1 cut(s) 462
PflMI CCANNNNNTGG 1 cut(s) 297
PkrI GCNGC 1 cut(s) 503
Ppu21I YACGTR 1 cut(s) 106
Psp6I CCWGG 2 cut(s) 11, 165
PspGI CCWGG 2 cut(s) 11, 165
PspN4I GGNNCC 1 cut(s) 302
PsuI RGATCY 1 cut(s) 300
PvuII CAGCTG 1 cut(s) 185
RseI CAYNNNNRTG 1 cut(s) 399
SaqAI TTAA 2 cut(s) 162, 209
SatI GCNGC 1 cut(s) 502
Sau3AI GATC 3 cut(s) 300, 336, 361
ScrFI CCNGG 4 cut(s) 13, 167, 327, 399
SduI GDGCHC 1 cut(s) 443
SfaNI GCATC 1 cut(s) 488
SmiMI CAYNNNNRTG 1 cut(s) 399
SmlI CTYRAG 1 cut(s) 423
SmoI CTYRAG 1 cut(s) 423
SphI GCATGC 1 cut(s) 568
Sse9I AATT 4 cut(s) 124, 308, 411, 433
SsiI CCGC 1 cut(s) 228
SspI AATATT 1 cut(s) 657
StyD4I CCNGG 4 cut(s) 11, 165, 325, 397
TaaI ACNGT 3 cut(s) 34, 115, 160
TaiI ACGT 2 cut(s) 108, 288
TaqI TCGA 3 cut(s) 120, 454, 496
TasI AATT 4 cut(s) 124, 308, 411, 433
Tru1I TTAA 2 cut(s) 162, 209
Tru9I TTAA 2 cut(s) 162, 209
TscAI CASTG 2 cut(s) 136, 163
TseFI GTSAC 1 cut(s) 28
TseI GCWGC 1 cut(s) 501
Tsp45I GTSAC 1 cut(s) 28
TspDTI ATGAA 3 cut(s) 7, 232, 294
TspRI CASTG 2 cut(s) 136, 163
Van91I CCANNNNNTGG 1 cut(s) 297
XceI RCATGY 1 cut(s) 568
XcmI CCANNNNNNNNNTGG 1 cut(s) 578
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.