Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0007657

Physical Location & Seq

Genomic Coordinates Reverse (-)

17684083 .. 17687728

Gene Structure 3646 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G180800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1347 bp

ATGGTTATTTCTGATGAGAACCGTTCTAATCTGGTCAGACCAACAACTATGCAAGGAGGACTAAATGTGGGTACCGGTAAGCTTGGACAACAGCAGGTTAGGCACACCAGGAGGGCCTTAGGAGTCATTAATGGAAGTTTAGTGGCGGCTCAAGGATACCCCTGTGTTGTTAACAAGAGAGCCTTCCCAGAAAAACGTGAATTCTATGAAAAGAAGCAGGCAGATCCAGCGCATAGACCAATTACAAGGAAGTTCGCTGCACAAATTGAAAGCACTCAGCAGCATTGTGCGAAGGAAACAAAGTTGCCCGAGCTACCAAACACATCAGCCATTAACTCAACTGGTTTTGGAGATTGTATATTCATAGACGAGGAATGCGAGTCACCTGAAGACCAGGCTGACCAACCGGAGCCCATGTTTTTAGAACAAGCAGAAACAGTGCCGGATGAAGCAGATGATACGAAGGAGATTGAGATGGAGGATATTATGGAAGAGCCGATTGTGGACATTGATGGCTGCGATTTGAAGAATCCACTTGCAGTTGTAGAATATGTTGAGGATCTTTATGCTTATTATAGGAGAATGGAGGGTTTTAGCTGTGTCCCACCTAACTATCTGGAACAACAATTTGACATCAATGAGAAGATGAGGGCTATACTAATTGACTGGCTTATTGAGGTGCACGACAAGTTTGAACTCCTGAAGGAGACATTGTTTCTTACTGTGAATCTTATAGATAGATTTTTATCCAAGCAAACAGTTGTAAGAAAGAAGCTTCAATTGGTTGGTCTGGTTGCCATGCTTTTAGCATGCAAATATGAGGAAGTTTCTGTTCCAGTAGTTGGGGATTTAATCCTTATATCAGATAAGGCTTACACAAGGAAGGAAGTCCTGGAAATGGAGAACTTGATGCTTAATACATTGCAATTTAACATGTCAGTTCCGACACCGTATGTTTTCATGAAAAGGTTCCTCAAGGCTGCTCAATCTGACAAGAAGCTTGAACTGCTATCCTTCTTCTTGATAGAGCTTTCTCTGGTGGAGTATGAGATGCTCAAGTTTCCACCATCTTTATTAGCTGCTGCTGCAGTCTATACTGCTCAAGCTACTCTTTATGGGTTCAAGCAGTGGAGTAGAACCTGTGAGTGGCACACAAGCTACTCAGAAGATAAGCTTTTTAATTTCTTGAATTGTGGTAACAGAGAATGCTCAAGTTTGATGGTTGGCTTCCACCAGAAGGCACCAACAGGGAGACTCACAGGGGTACATAGGAAGTATTGTACATCCAAGTTTGGCTTCACCGCAAATTCGGAACCAGCACAGTTTCTCATACAGACTCAACTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cyclin_C Cyclin_N

Protein Analysis

449

Amino Acids

51.09

Weight (kDa)

5.18

Isoelectric Point (pI)

43.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007657)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17620 AT4G35620 AT4G35620
fragaria_vesca	FvH4_1g10520 FvH4_1g10520 FvH4_1g10520 FvH4_1g10520 FvH4_1g10520
malus_domestica	MD02G1119100.v1.1 MD15G1233100.v1.1
prunus_persica	Prupe.7G180800_v2.0.a1 Prupe.7G180800_v2.0.a1
pyrus_communis	pycom02g09280 pycom15g20760
rosa_chinensis	RchiOBHm_Chr2g0097421 RchiOBHm_Chr2g0097521
rosa_multiflora	Rmu_sc0004220.1_g000007
rosa_roxburghii	Rroxscaffold_2G00144700
rosa_rugosa	Rorug02G0066900
rosa_samantha	Rh2AG113300 Rh2BG116400 Rh2CG118400 Rh2DG117400
rosa_wichuraiana	Rw2G008880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	85
Acc65I	GGTACC	1 cut(s)	71
AccB1I	GGYRCC	2 cut(s)	71, 1240
AccB7I	CCANNNNNTGG	1 cut(s)	842
AciI	CCGC	2 cut(s)	146, 1302
AclWI	GGATC	2 cut(s)	218, 567
AcsI	RAATTY	2 cut(s)	200, 1306
AcuI	CTGAAG	2 cut(s)	408, 722
AfaI	GTAC	3 cut(s)	73, 1266, 1282
AfiI	CCNNNNNNNGG	4 cut(s)	842, 898, 1146, 1237
AflIII	ACRYGT	1 cut(s)	933
AgeI	ACCGGT	1 cut(s)	74
AgsI	TTSAA	7 cut(s)	269, 526, 695, 779, 1004, 1123, 1189
AjnI	CCWGG	3 cut(s)	107, 393, 891
AjuI	GAANNNNNNNTTGG	4 cut(s)	764, 796, 1280, 1312
Alw21I	GWGCWC	1 cut(s)	684
Alw26I	GTCTC	2 cut(s)	701, 1246
Alw44I	GTGCAC	1 cut(s)	680
AlwI	GGATC	2 cut(s)	218, 567
Ama87I	CYCGRG	1 cut(s)	308
AoxI	GGCC	1 cut(s)	114
ApaLI	GTGCAC	1 cut(s)	680
ApeKI	GCWGC	7 cut(s)	257, 280, 516, 980, 1079, 1082, 1085
ApoI	RAATTY	2 cut(s)	200, 1306
AseI	ATTAAT	1 cut(s)	129
AsiGI	ACCGGT	1 cut(s)	74
Asp700I	GAANNNNTTC	1 cut(s)	968
Asp718I	GGTACC	1 cut(s)	71
AspLEI	GCGC	1 cut(s)	232
AspS9I	GGNCC	1 cut(s)	114
AsuHPI	GGTGA	2 cut(s)	375, 1291
AvaI	CYCGRG	1 cut(s)	308
AxyI	CCTNAGG	1 cut(s)	118
BaeGI	GKGCMC	1 cut(s)	684
BaeI	ACNNNNGTAYC	2 cut(s)	148, 181
BanI	GGYRCC	2 cut(s)	71, 1240
BanII	GRGCYC	1 cut(s)	414
BbsI	GAAGAC	1 cut(s)	396
Bbv12I	GWGCWC	1 cut(s)	684
BbvI	GCAGC	7 cut(s)	244, 292, 503, 967, 1066, 1069, 1072
BccI	CCATC	4 cut(s)	469, 506, 1075, 1213
BciT130I	CCWGG	3 cut(s)	109, 395, 893
BciVI	GTATCC	1 cut(s)	149
BcoDI	GTCTC	2 cut(s)	701, 1246
BfmI	CTRYAG	2 cut(s)	1086, 1343
BfuAI	ACCTGC	1 cut(s)	85
BfuI	GTATCC	1 cut(s)	149
BisI	GCNGC	8 cut(s)	147, 258, 281, 517, 981, 1080, 1083, 1086
BlsI	GCNGC	8 cut(s)	148, 259, 282, 518, 982, 1081, 1084, 1087
Bme1390I	CCNGG	3 cut(s)	109, 395, 893
BmeT110I	CYCGRG	1 cut(s)	308
BmgT120I	GGNCC	1 cut(s)	114
BmiI	GGNNCC	5 cut(s)	73, 411, 971, 1242, 1314
BmrFI	CCNGG	3 cut(s)	109, 395, 893
BmsI	GCATC	2 cut(s)	900, 1041
BpiI	GAAGAC	1 cut(s)	396
BpuEI	CTTGAG	5 cut(s)	135, 959, 1040, 1086, 1195
BsaBI	GATNNNNATC	1 cut(s)	745
BsaWI	WCCGGW	2 cut(s)	74, 406
BsaXI	ACNNNNNCTCC	4 cut(s)	401, 431, 698, 728
Bsc4I	CCNNNNNNNGG	4 cut(s)	842, 898, 1146, 1237
Bse118I	RCCGGY	1 cut(s)	74
Bse1I	ACTGG	3 cut(s)	346, 671, 836
Bse21I	CCTNAGG	1 cut(s)	118
Bse3DI	GCAATG	1 cut(s)	920
Bse8I	GATNNNNATC	1 cut(s)	745
BseBI	CCWGG	3 cut(s)	109, 395, 893
BseGI	GGATG	2 cut(s)	451, 1283
BseJI	GATNNNNATC	1 cut(s)	745
BseLI	CCNNNNNNNGG	4 cut(s)	842, 898, 1146, 1237
BseMI	GCAATG	1 cut(s)	920
BseMII	CTCAG	2 cut(s)	290, 1176
BseNI	ACTGG	3 cut(s)	346, 671, 836
BseSI	GKGCMC	1 cut(s)	684
BseXI	GCAGC	7 cut(s)	244, 292, 503, 967, 1066, 1069, 1072
BsgI	GTGCAG	1 cut(s)	243
BshFI	GGCC	1 cut(s)	116
BshNI	GGYRCC	2 cut(s)	71, 1240
BshTI	ACCGGT	1 cut(s)	74
BsiHKAI	GWGCWC	1 cut(s)	684
BsiHKCI	CYCGRG	1 cut(s)	308
BsiSI	CCGG	3 cut(s)	75, 407, 443
BslFI	GGGAC	1 cut(s)	587
BslI	CCNNNNNNNGG	4 cut(s)	842, 898, 1146, 1237
BsmAI	GTCTC	2 cut(s)	701, 1246
BsmFI	GGGAC	1 cut(s)	587
BsmI	GAATGC	2 cut(s)	380, 1211
BsnI	GGCC	1 cut(s)	116
BsoBI	CYCGRG	1 cut(s)	308
Bsp1286I	GDGCHC	2 cut(s)	414, 684
Bsp1407I	TGTACA	1 cut(s)	1280
Bsp143I	GATC	2 cut(s)	223, 559
BspACI	CCGC	2 cut(s)	146, 1302
BspANI	GGCC	1 cut(s)	116
BspCNI	CTCAG	2 cut(s)	289, 1175
BspHI	TCATGA	1 cut(s)	960
BspLI	GGNNCC	5 cut(s)	73, 411, 971, 1242, 1314
BspMAI	CTGCAG	1 cut(s)	1090
BspMI	ACCTGC	1 cut(s)	85
BspPI	GGATC	2 cut(s)	218, 567
BspQI	GCTCTTC	1 cut(s)	486
BspT107I	GGYRCC	2 cut(s)	71, 1240
BsrDI	GCAATG	1 cut(s)	920
BsrFI	RCCGGY	1 cut(s)	74
BsrGI	TGTACA	1 cut(s)	1280
BsrI	ACTGG	3 cut(s)	346, 671, 836
BssAI	RCCGGY	1 cut(s)	74
BssMI	GATC	2 cut(s)	223, 559
Bst2UI	CCWGG	3 cut(s)	109, 395, 893
Bst4CI	ACNGT	6 cut(s)	23, 439, 724, 760, 951, 1323
Bst6I	CTCTTC	1 cut(s)	486
BstAUI	TGTACA	1 cut(s)	1280
BstC8I	GCNNGC	2 cut(s)	219, 811
BstDEI	CTNAG	3 cut(s)	118, 276, 1162
BstF5I	GGATG	2 cut(s)	451, 1283
BstHHI	GCGC	1 cut(s)	232
BstKTI	GATC	2 cut(s)	226, 562
BstMAI	GTCTC	2 cut(s)	701, 1246
BstMBI	GATC	2 cut(s)	223, 559
BstMWI	GCNNNNNNNGC	4 cut(s)	100, 227, 1006, 1085
BstNI	CCWGG	3 cut(s)	109, 395, 893
BstNSI	RCATGY	2 cut(s)	813, 937
BstSCI	CCNGG	3 cut(s)	107, 393, 891
BstSFI	CTRYAG	2 cut(s)	1086, 1343
BstSLI	GKGCMC	1 cut(s)	684
BstV1I	GCAGC	7 cut(s)	244, 292, 503, 967, 1066, 1069, 1072
BstV2I	GAAGAC	1 cut(s)	396
BstX2I	RGATCY	2 cut(s)	223, 559
BstYI	RGATCY	2 cut(s)	223, 559
Bsu36I	CCTNAGG	1 cut(s)	118
BsuI	GTATCC	1 cut(s)	149
BsuRI	GGCC	1 cut(s)	116
BtsCI	GGATG	2 cut(s)	451, 1283
BtsI	GCAGTG	1 cut(s)	1133
BtsIMutI	CAGTG	2 cut(s)	444, 1133
BveI	ACCTGC	1 cut(s)	85
Cac8I	GCNNGC	2 cut(s)	219, 811
CciI	TCATGA	1 cut(s)	960
CfoI	GCGC	1 cut(s)	232
Cfr10I	RCCGGY	1 cut(s)	74
Cfr13I	GGNCC	1 cut(s)	114
Csp6I	GTAC	3 cut(s)	72, 1265, 1281
CspAI	ACCGGT	1 cut(s)	74
CviAII	CATG	5 cut(s)	415, 799, 810, 934, 961
CviQI	GTAC	3 cut(s)	72, 1265, 1281
DdeI	CTNAG	3 cut(s)	118, 276, 1162
DpnI	GATC	2 cut(s)	225, 561
DpnII	GATC	2 cut(s)	223, 559
Eam1104I	CTCTTC	1 cut(s)	486
EarI	CTCTTC	1 cut(s)	486
Eco24I	GRGCYC	1 cut(s)	414
Eco57I	CTGAAG	2 cut(s)	408, 722
Eco81I	CCTNAGG	1 cut(s)	118
Eco88I	CYCGRG	1 cut(s)	308
EcoO109I	RGGNCCY	1 cut(s)	114
EcoRI	GAATTC	1 cut(s)	200
EcoRII	CCWGG	3 cut(s)	107, 393, 891
EcoT38I	GRGCYC	1 cut(s)	414
FaeI	CATG	5 cut(s)	418, 802, 813, 937, 964
FalI	AAGNNNNNCTT	8 cut(s)	167, 199, 1095, 1127, 1158, 1190, 1280, 1312
FaqI	GGGAC	1 cut(s)	587
FatI	CATG	5 cut(s)	414, 798, 809, 933, 960
Fnu4HI	GCNGC	8 cut(s)	147, 258, 281, 517, 981, 1080, 1083, 1086
FokI	GGATG	2 cut(s)	458, 1270
FriOI	GRGCYC	1 cut(s)	414
Fsp4HI	GCNGC	8 cut(s)	147, 258, 281, 517, 981, 1080, 1083, 1086
GlaI	GCGC	1 cut(s)	231
GluI	GCNGC	8 cut(s)	147, 258, 281, 517, 981, 1080, 1083, 1086
HaeIII	GGCC	1 cut(s)	116
HapII	CCGG	3 cut(s)	75, 407, 443
HhaI	GCGC	1 cut(s)	232
Hin1II	CATG	5 cut(s)	418, 802, 813, 937, 964
Hin6I	GCGC	1 cut(s)	230
HinP1I	GCGC	1 cut(s)	230
HincII	GTYRAC	1 cut(s)	172
HindII	GTYRAC	1 cut(s)	172
HindIII	AAGCTT	4 cut(s)	80, 773, 998, 1172
HinfI	GANTC	6 cut(s)	123, 380, 529, 727, 1254, 1336
HpaI	GTTAAC	1 cut(s)	172
HpaII	CCGG	3 cut(s)	75, 407, 443
HphI	GGTGA	2 cut(s)	375, 1291
Hpy166II	GTNNAC	3 cut(s)	172, 505, 682
Hpy188I	TCNGA	7 cut(s)	13, 38, 865, 945, 991, 1165, 1312
Hpy188III	TCNNGA	5 cut(s)	617, 700, 961, 1021, 1186
Hpy8I	GTNNAC	3 cut(s)	172, 505, 682
HpyAV	CCTTC	7 cut(s)	193, 286, 457, 697, 877, 1024, 1231
HpyCH4III	ACNGT	6 cut(s)	23, 439, 724, 760, 951, 1323
HpyCH4IV	ACGT	1 cut(s)	196
HpyCH4V	TGCA	7 cut(s)	52, 260, 539, 682, 813, 925, 1088
HpyF10VI	GCNNNNNNNGC	4 cut(s)	100, 227, 1006, 1085
HpyF3I	CTNAG	3 cut(s)	118, 276, 1162
HpySE526I	ACGT	1 cut(s)	196
Hsp92II	CATG	5 cut(s)	418, 802, 813, 937, 964
HspAI	GCGC	1 cut(s)	230
KpnI	GGTACC	1 cut(s)	75
KspAI	GTTAAC	1 cut(s)	172
Kzo9I	GATC	2 cut(s)	223, 559
LguI	GCTCTTC	1 cut(s)	486
LmnI	GCTCC	1 cut(s)	409
Lsp1109I	GCAGC	7 cut(s)	244, 292, 503, 967, 1066, 1069, 1072
LweI	GCATC	2 cut(s)	900, 1041
MaeII	ACGT	1 cut(s)	196
MaeIII	GTNAC	2 cut(s)	381, 1196
MalI	GATC	2 cut(s)	225, 561
MboI	GATC	2 cut(s)	223, 559
MboII	GAAGA	6 cut(s)	401, 503, 538, 655, 1009, 1178
MfeI	CAATTG	1 cut(s)	779
MflI	RGATCY	2 cut(s)	223, 559
MhlI	GDGCHC	2 cut(s)	414, 684
MlyI	GAGTC	4 cut(s)	132, 389, 1248, 1330
MmeI	TCCRAC	1 cut(s)	968
MroXI	GAANNNNTTC	1 cut(s)	968
MseI	TTAA	7 cut(s)	129, 171, 333, 851, 915, 930, 1179
MspI	CCGG	3 cut(s)	75, 407, 443
MspR9I	CCNGG	3 cut(s)	109, 395, 893
MunI	CAATTG	1 cut(s)	779
Mva1269I	GAATGC	2 cut(s)	380, 1211
MvaI	CCWGG	3 cut(s)	109, 395, 893
MwoI	GCNNNNNNNGC	4 cut(s)	100, 227, 1006, 1085
NdeII	GATC	2 cut(s)	223, 559
NlaIII	CATG	5 cut(s)	418, 802, 813, 937, 964
NlaIV	GGNNCC	5 cut(s)	73, 411, 971, 1242, 1314
NmuCI	GTSAC	1 cut(s)	381
NspI	RCATGY	2 cut(s)	813, 937
PaeI	GCATGC	1 cut(s)	813
PagI	TCATGA	1 cut(s)	960
PciI	ACATGT	1 cut(s)	933
PciSI	GCTCTTC	1 cut(s)	486
PcsI	WCGNNNNNNNCGW	1 cut(s)	375
PctI	GAATGC	2 cut(s)	380, 1211
PdmI	GAANNNNTTC	1 cut(s)	968
PfeI	GAWTC	2 cut(s)	529, 727
PflMI	CCANNNNNTGG	1 cut(s)	842
PfoI	TCCNGGA	1 cut(s)	891
PinAI	ACCGGT	1 cut(s)	74
PkrI	GCNGC	8 cut(s)	148, 259, 282, 518, 982, 1081, 1084, 1087
PleI	GAGTC	4 cut(s)	131, 388, 1248, 1330
PpsI	GAGTC	4 cut(s)	131, 388, 1248, 1330
PscI	ACATGT	1 cut(s)	933
PshBI	ATTAAT	1 cut(s)	129
Psp6I	CCWGG	3 cut(s)	107, 393, 891
PspGI	CCWGG	3 cut(s)	107, 393, 891
PspN4I	GGNNCC	5 cut(s)	73, 411, 971, 1242, 1314
PspPI	GGNCC	1 cut(s)	114
PstI	CTGCAG	1 cut(s)	1090
PsuI	RGATCY	2 cut(s)	223, 559
RsaI	GTAC	3 cut(s)	73, 1266, 1282
RsaNI	GTAC	3 cut(s)	72, 1265, 1281
SapI	GCTCTTC	1 cut(s)	486
SaqAI	TTAA	7 cut(s)	129, 171, 333, 851, 915, 930, 1179
SatI	GCNGC	8 cut(s)	147, 258, 281, 517, 981, 1080, 1083, 1086
Sau3AI	GATC	2 cut(s)	223, 559
Sau96I	GGNCC	1 cut(s)	114
SchI	GAGTC	4 cut(s)	132, 389, 1248, 1330
ScrFI	CCNGG	3 cut(s)	109, 395, 893
SduI	GDGCHC	2 cut(s)	414, 684
SfaNI	GCATC	2 cut(s)	900, 1041
SfcI	CTRYAG	2 cut(s)	1086, 1343
SmlI	CTYRAG	5 cut(s)	150, 974, 1055, 1101, 1210
SmoI	CTYRAG	5 cut(s)	150, 974, 1055, 1101, 1210
SphI	GCATGC	1 cut(s)	813
SsiI	CCGC	2 cut(s)	146, 1302
StyD4I	CCNGG	3 cut(s)	107, 393, 891
TaaI	ACNGT	6 cut(s)	23, 439, 724, 760, 951, 1323
TaiI	ACGT	1 cut(s)	199
TatI	WGTACW	1 cut(s)	1280
TauI	GCSGC	1 cut(s)	149
TfiI	GAWTC	2 cut(s)	529, 727
Tru1I	TTAA	7 cut(s)	129, 171, 333, 851, 915, 930, 1179
Tru9I	TTAA	7 cut(s)	129, 171, 333, 851, 915, 930, 1179
TscAI	CASTG	2 cut(s)	444, 1133
TseFI	GTSAC	1 cut(s)	381
TseI	GCWGC	7 cut(s)	257, 280, 516, 980, 1079, 1082, 1085
Tsp45I	GTSAC	1 cut(s)	381
TspDTI	ATGAA	5 cut(s)	222, 352, 462, 949, 977
TspRI	CASTG	2 cut(s)	444, 1133
Van91I	CCANNNNNTGG	1 cut(s)	842
VneI	GTGCAC	1 cut(s)	680
VspI	ATTAAT	1 cut(s)	129
XapI	RAATTY	2 cut(s)	200, 1306
XceI	RCATGY	2 cut(s)	813, 937
XmnI	GAANNNNTTC	1 cut(s)	968

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.