pycom02g09280

Belongs to the cyclin family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
6369532 .. 6372416
2885 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g09280.2

Sequence Viewer

Length: 1347 bp
ATGGTTATTTCTGATGAGAACCGTTCTAATCTGATCAGACCCACAAATATGCAAGGAGGACTAGAGGTGGGTACCGGCAAGCTTGGACAGCGGCAGATTAGGCAGACCAGGAGGGCTTTAGGAGTCATTAATCAAAGCTTGTTAGGAGCTCCAGCATACCCTTGTGTTGTTAACAAGAGACCCTTTACACAAAAACATGAAGTTTATGAGAAGAAGCAGGCAGATCCAGCGCACAGACCAATCACCAGGAAATTTGCTGCACAAATTAGCACTCAGCCATCTTGTTTCGAGGAAGTCAAGATCCCCAAGGTGCCAAACAAAGCAGATGAAACCACCAACTCAGCAGGTTTTGGAGATTGCATTAGTATATTCGTAGACGATGAATTCAAGTCCCCTGAAGGCCAAGCAGAAGCAATGACGGAGGACGCAGAGCCCATGTTCTTAGAGCAAGAAGAATCAACGCCGGAAGAAGCAAATGATACGAAAGAGGTTGAAATGGAGGACATTGTGGAAGAGCCTCTTGTGGATATTGACGGTGGCGATTTGAAGAATCCGCTTGCAGTTGTAGACTATGTAGAGGATCTCTATGCTTACTATAGGAGAATGGAGGGTTTCAGCTGTGTCCCACCTAACTATTTGGAGCAACAATGTGACATCAATGAGAAGATGAGGGCTATACTAATTGACTGGCTTATTGAGGTGCACGACAAGTTTGAGCTACTGAAGGAGACATTGTTTCTTACTGTGAACCTTATAGACAGATTTTTATCCCAGCATACGGTTGTAAGAAAGAAACTTCAGTTGGTTGGTCTGGTTGCCATGCTTTTAGCATGCAAATATGAGGAAGTTTCTGTTCCTATCGTCGGGGATTTGATTCTTATATCGGATAAAGCTTACACAAGGAATGATGTCCTGGAAATGGAGAACATGATGCTCAACACATTGCAGTTTAACATGTCAGTTCCAACGCCGTATGTTTTCATGAATAGATTCCTCAAGGCTGCTCAATCCGACAAGAAGATCGAACTCCTATCGTTCTTCTTAATCGAGCTCTCTCTCGTGGAGTACCAAATGCTGAAGTTTCCACCATCTTTGTTAGCTGCTGCTGCAGTCTACACTGCTCAATGCACTCTTCTCGGGTTCAAGCAATGGAGCAGCACCTGCGAGTGGCACACAAACTACTCGGAAGAACAGCTCTTAGAATGCTCAAGTTTGATGGTGGGATTCCACCAGAAGGCGTCAACGGGGAGGCTGACAGGGGTGCACAGGAAGTACTGTACATCCAAGTTTGGCTACATTGCAAATTCAGAACCAGCAAAGTGTCTGGTGCAGAATCAACAACTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

449

Amino Acids

50.85

Weight (kDa)

5.03

Isoelectric Point (pI)

43.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1169
Acc36I ACCTGC 2 cut(s) 335, 1169
Acc65I GGTACC 1 cut(s) 71
AccB1I GGYRCC 2 cut(s) 71, 310
AccI GTMKAC 3 cut(s) 375, 567, 1113
AciI CCGC 2 cut(s) 91, 554
AclWI GGATC 3 cut(s) 218, 295, 588
AcsI RAATTY 3 cut(s) 251, 383, 1303
AcuI CTGAAG 4 cut(s) 417, 743, 782, 1097
AcyI GRCGYC 1 cut(s) 1238
AfaI GTAC 4 cut(s) 73, 1067, 1274, 1279
AfiI CCNNNNNNNGG 5 cut(s) 778, 863, 919, 1167, 1234
AflIII ACRYGT 1 cut(s) 954
AgsI TTSAA 4 cut(s) 388, 494, 547, 1144
AjnI CCWGG 3 cut(s) 107, 245, 912
AjuI GAANNNNNNNTTGG 2 cut(s) 785, 817
AluBI AGCT 9 cut(s) 82, 138, 149, 618, 718, 893, 1051, 1100, 1195
AluI AGCT 9 cut(s) 82, 138, 149, 618, 718, 893, 1051, 1100, 1195
Alw21I GWGCWC 4 cut(s) 151, 705, 1053, 1266
Alw26I GTCTC 2 cut(s) 172, 722
Alw44I GTGCAC 2 cut(s) 701, 1262
AlwI GGATC 3 cut(s) 218, 295, 588
AlwNI CAGNNNCTG 1 cut(s) 1161
Ama87I CYCGRG 1 cut(s) 1136
AoxI GGCC 1 cut(s) 400
ApaLI GTGCAC 2 cut(s) 701, 1262
ApeKI GCWGC 6 cut(s) 257, 1001, 1100, 1103, 1106, 1155
ApoI RAATTY 3 cut(s) 251, 383, 1303
AseI ATTAAT 1 cut(s) 129
Asp700I GAANNNNTTC 1 cut(s) 989
Asp718I GGTACC 1 cut(s) 71
AspLEI GCGC 1 cut(s) 232
AsuHPI GGTGA 1 cut(s) 235
AvaI CYCGRG 1 cut(s) 1136
BaeGI GKGCMC 2 cut(s) 705, 1266
BanI GGYRCC 2 cut(s) 71, 310
BanII GRGCYC 3 cut(s) 151, 435, 1053
BauI CACGAG 1 cut(s) 1058
Bbv12I GWGCWC 4 cut(s) 151, 705, 1053, 1266
BbvI GCAGC 6 cut(s) 244, 988, 1087, 1090, 1093, 1167
BccI CCATC 3 cut(s) 286, 1096, 1210
BceAI ACGGC 1 cut(s) 955
BcgI CGANNNNNNTGC 2 cut(s) 1117, 1151
BciT130I CCWGG 3 cut(s) 109, 247, 914
BclI TGATCA 1 cut(s) 33
BcoDI GTCTC 2 cut(s) 172, 722
BfaI CTAG 1 cut(s) 62
BfmI CTRYAG 3 cut(s) 595, 1107, 1343
BfuAI ACCTGC 2 cut(s) 335, 1169
BisI GCNGC 7 cut(s) 92, 258, 1002, 1101, 1104, 1107, 1156
BlsI GCNGC 7 cut(s) 93, 259, 1003, 1102, 1105, 1108, 1157
BmcAI AGTACT 1 cut(s) 1274
Bme1390I CCNGG 3 cut(s) 109, 247, 914
BmeT110I CYCGRG 1 cut(s) 1136
BmiI GGNNCC 2 cut(s) 73, 312
BmrFI CCNGG 3 cut(s) 109, 247, 914
BmsI GCATC 1 cut(s) 921
BpmI CTGGAG 1 cut(s) 135
BpuEI CTTGAG 2 cut(s) 980, 1192
BsaBI GATNNNNATC 1 cut(s) 766
BsaHI GRCGYC 1 cut(s) 1238
BsaI GGTCTC 1 cut(s) 172
BsaJI CCNNGG 1 cut(s) 306
BsaXI ACNNNNNCTCC 2 cut(s) 719, 749
Bsc4I CCNNNNNNNGG 5 cut(s) 778, 863, 919, 1167, 1234
Bse118I RCCGGY 1 cut(s) 74
Bse1I ACTGG 1 cut(s) 692
Bse3DI GCAATG 4 cut(s) 420, 941, 1154, 1296
Bse8I GATNNNNATC 1 cut(s) 766
BseBI CCWGG 3 cut(s) 109, 247, 914
BseDI CCNNGG 1 cut(s) 306
BseGI GGATG 1 cut(s) 1280
BseJI GATNNNNATC 1 cut(s) 766
BseLI CCNNNNNNNGG 5 cut(s) 778, 863, 919, 1167, 1234
BseMI GCAATG 4 cut(s) 420, 941, 1154, 1296
BseMII CTCAG 2 cut(s) 287, 354
BseNI ACTGG 1 cut(s) 692
BseSI GKGCMC 2 cut(s) 705, 1266
BseXI GCAGC 6 cut(s) 244, 988, 1087, 1090, 1093, 1167
BseYI CCCAGC 1 cut(s) 771
BsgI GTGCAG 1 cut(s) 243
BshFI GGCC 1 cut(s) 402
BshNI GGYRCC 2 cut(s) 71, 310
BsiHKAI GWGCWC 4 cut(s) 151, 705, 1053, 1266
BsiHKCI CYCGRG 1 cut(s) 1136
BsiSI CCGG 2 cut(s) 75, 464
BslFI GGGAC 2 cut(s) 376, 608
BslI CCNNNNNNNGG 5 cut(s) 778, 863, 919, 1167, 1234
BsmAI GTCTC 2 cut(s) 172, 722
BsmFI GGGAC 2 cut(s) 376, 608
BsmI GAATGC 1 cut(s) 1208
BsnI GGCC 1 cut(s) 402
Bso31I GGTCTC 1 cut(s) 172
BsoBI CYCGRG 1 cut(s) 1136
Bsp1286I GDGCHC 5 cut(s) 151, 435, 705, 1053, 1266
Bsp1407I TGTACA 1 cut(s) 1277
Bsp143I GATC 5 cut(s) 33, 223, 300, 580, 1020
BspACI CCGC 2 cut(s) 91, 554
BspANI GGCC 1 cut(s) 402
BspCNI CTCAG 2 cut(s) 286, 353
BspHI TCATGA 1 cut(s) 981
BspLI GGNNCC 2 cut(s) 73, 312
BspMAI CTGCAG 1 cut(s) 1111
BspMI ACCTGC 2 cut(s) 335, 1169
BspPI GGATC 3 cut(s) 218, 295, 588
BspQI GCTCTTC 1 cut(s) 507
BspT107I GGYRCC 2 cut(s) 71, 310
BspTNI GGTCTC 1 cut(s) 172
BsrDI GCAATG 4 cut(s) 420, 941, 1154, 1296
BsrFI RCCGGY 1 cut(s) 74
BsrGI TGTACA 1 cut(s) 1277
BsrI ACTGG 1 cut(s) 692
BssAI RCCGGY 1 cut(s) 74
BssECI CCNNGG 1 cut(s) 306
BssMI GATC 5 cut(s) 33, 223, 300, 580, 1020
BssNI GRCGYC 1 cut(s) 1238
BssSI CACGAG 1 cut(s) 1058
BssT1I CCWWGG 1 cut(s) 306
Bst2BI CACGAG 1 cut(s) 1058
Bst2UI CCWGG 3 cut(s) 109, 247, 914
Bst4CI ACNGT 5 cut(s) 23, 536, 745, 781, 1277
Bst6I CTCTTC 2 cut(s) 507, 1137
BstACI GRCGYC 1 cut(s) 1238
BstAPI GCANNNNNTGC 1 cut(s) 1161
BstAUI TGTACA 1 cut(s) 1277
BstC8I GCNNGC 4 cut(s) 80, 219, 558, 832
BstDEI CTNAG 4 cut(s) 273, 340, 442, 1198
BstF5I GGATG 1 cut(s) 1280
BstHHI GCGC 1 cut(s) 232
BstKTI GATC 5 cut(s) 36, 226, 303, 583, 1023
BstMAI GTCTC 2 cut(s) 172, 722
BstMBI GATC 5 cut(s) 33, 223, 300, 580, 1020
BstMWI GCNNNNNNNGC 5 cut(s) 88, 100, 227, 1106, 1161
BstNI CCWGG 3 cut(s) 109, 247, 914
BstNSI RCATGY 2 cut(s) 834, 958
BstSCI CCNGG 3 cut(s) 107, 245, 912
BstSFI CTRYAG 3 cut(s) 595, 1107, 1343
BstSLI GKGCMC 2 cut(s) 705, 1266
BstV1I GCAGC 6 cut(s) 244, 988, 1087, 1090, 1093, 1167
BstX2I RGATCY 3 cut(s) 223, 300, 580
BstYI RGATCY 3 cut(s) 223, 300, 580
BsuRI GGCC 1 cut(s) 402
BtsCI GGATG 1 cut(s) 1280
BtsI GCAGTG 1 cut(s) 1116
BtsIMutI CAGTG 1 cut(s) 1116
BveI ACCTGC 2 cut(s) 335, 1169
Cac8I GCNNGC 4 cut(s) 80, 219, 558, 832
CaiI CAGNNNCTG 1 cut(s) 1161
CciI TCATGA 1 cut(s) 981
CfoI GCGC 1 cut(s) 232
Cfr10I RCCGGY 1 cut(s) 74
CseI GACGC 2 cut(s) 434, 1227
Csp6I GTAC 4 cut(s) 72, 1066, 1273, 1278
CspCI CAANNNNNGTGG 2 cut(s) 1074, 1109
CviAII CATG 7 cut(s) 197, 436, 820, 831, 928, 955, 982
CviQI GTAC 4 cut(s) 72, 1066, 1273, 1278
DdeI CTNAG 4 cut(s) 273, 340, 442, 1198
DpnI GATC 5 cut(s) 35, 225, 302, 582, 1022
DpnII GATC 5 cut(s) 33, 223, 300, 580, 1020
Eam1104I CTCTTC 2 cut(s) 507, 1137
EarI CTCTTC 2 cut(s) 507, 1137
Ecl136II GAGCTC 2 cut(s) 149, 1051
Eco130I CCWWGG 1 cut(s) 306
Eco24I GRGCYC 3 cut(s) 151, 435, 1053
Eco31I GGTCTC 1 cut(s) 172
Eco53kI GAGCTC 2 cut(s) 149, 1051
Eco57I CTGAAG 4 cut(s) 417, 743, 782, 1097
Eco88I CYCGRG 1 cut(s) 1136
EcoICRI GAGCTC 2 cut(s) 149, 1051
EcoRI GAATTC 1 cut(s) 383
EcoRII CCWGG 3 cut(s) 107, 245, 912
EcoT14I CCWWGG 1 cut(s) 306
EcoT38I GRGCYC 3 cut(s) 151, 435, 1053
ErhI CCWWGG 1 cut(s) 306
FaeI CATG 7 cut(s) 200, 439, 823, 834, 931, 958, 985
FalI AAGNNNNNCTT 4 cut(s) 167, 199, 504, 536
FaqI GGGAC 2 cut(s) 376, 608
FatI CATG 7 cut(s) 196, 435, 819, 830, 927, 954, 981
FbaI TGATCA 1 cut(s) 33
FblI GTMKAC 3 cut(s) 375, 567, 1113
Fnu4HI GCNGC 7 cut(s) 92, 258, 1002, 1101, 1104, 1107, 1156
FokI GGATG 1 cut(s) 1267
FriOI GRGCYC 3 cut(s) 151, 435, 1053
Fsp4HI GCNGC 7 cut(s) 92, 258, 1002, 1101, 1104, 1107, 1156
FspBI CTAG 1 cut(s) 62
GlaI GCGC 1 cut(s) 231
GluI GCNGC 7 cut(s) 92, 258, 1002, 1101, 1104, 1107, 1156
GsaI CCCAGC 1 cut(s) 775
GsuI CTGGAG 1 cut(s) 135
HaeIII GGCC 1 cut(s) 402
HapII CCGG 2 cut(s) 75, 464
HgaI GACGC 2 cut(s) 434, 1227
HhaI GCGC 1 cut(s) 232
Hin1I GRCGYC 1 cut(s) 1238
Hin1II CATG 7 cut(s) 200, 439, 823, 834, 931, 958, 985
Hin6I GCGC 1 cut(s) 230
HinP1I GCGC 1 cut(s) 230
HincII GTYRAC 2 cut(s) 172, 1242
HindII GTYRAC 2 cut(s) 172, 1242
HindIII AAGCTT 3 cut(s) 80, 136, 891
HinfI GANTC 7 cut(s) 123, 455, 550, 874, 990, 1224, 1333
HpaI GTTAAC 1 cut(s) 172
HpaII CCGG 2 cut(s) 75, 464
HphI GGTGA 1 cut(s) 235
Hpy166II GTNNAC 8 cut(s) 172, 376, 568, 703, 748, 1114, 1242, 1264
Hpy188I TCNGA 7 cut(s) 13, 33, 38, 886, 1012, 1186, 1309
Hpy188III TCNNGA 2 cut(s) 298, 982
Hpy8I GTNNAC 8 cut(s) 172, 376, 568, 703, 748, 1114, 1242, 1264
Hpy99I CGWCG 1 cut(s) 866
HpyAV CCTTC 3 cut(s) 392, 718, 1228
HpyCH4III ACNGT 5 cut(s) 23, 536, 745, 781, 1277
HpyF10VI GCNNNNNNNGC 5 cut(s) 88, 100, 227, 1106, 1161
HpyF3I CTNAG 4 cut(s) 273, 340, 442, 1198
Hsp92I GRCGYC 1 cut(s) 1238
Hsp92II CATG 7 cut(s) 200, 439, 823, 834, 931, 958, 985
HspAI GCGC 1 cut(s) 230
KpnI GGTACC 1 cut(s) 75
Ksp22I TGATCA 1 cut(s) 33
KspAI GTTAAC 1 cut(s) 172
Kzo9I GATC 5 cut(s) 33, 223, 300, 580, 1020
LguI GCTCTTC 1 cut(s) 507
LmnI GCTCC 4 cut(s) 146, 154, 640, 1152
Lsp1109I GCAGC 6 cut(s) 244, 988, 1087, 1090, 1093, 1167
LweI GCATC 1 cut(s) 921
MaeI CTAG 1 cut(s) 62
MaeIII GTNAC 1 cut(s) 650
MalI GATC 5 cut(s) 35, 225, 302, 582, 1022
MboI GATC 5 cut(s) 33, 223, 300, 580, 1020
MflI RGATCY 3 cut(s) 223, 300, 580
MhlI GDGCHC 5 cut(s) 151, 435, 705, 1053, 1266
MluCI AATT 5 cut(s) 251, 264, 383, 681, 1303
MlyI GAGTC 1 cut(s) 132
MmeI TCCRAC 2 cut(s) 989, 1035
MroXI GAANNNNTTC 1 cut(s) 989
MseI TTAA 4 cut(s) 129, 171, 951, 1043
MslI CAYNNNNRTG 1 cut(s) 47
MspA1I CMGCKG 2 cut(s) 91, 618
MspI CCGG 2 cut(s) 75, 464
MspR9I CCNGG 3 cut(s) 109, 247, 914
Mva1269I GAATGC 1 cut(s) 1208
MvaI CCWGG 3 cut(s) 109, 247, 914
MwoI GCNNNNNNNGC 5 cut(s) 88, 100, 227, 1106, 1161
NdeII GATC 5 cut(s) 33, 223, 300, 580, 1020
NlaIII CATG 7 cut(s) 200, 439, 823, 834, 931, 958, 985
NlaIV GGNNCC 2 cut(s) 73, 312
NmuCI GTSAC 1 cut(s) 650
NspI RCATGY 2 cut(s) 834, 958
PaeI GCATGC 1 cut(s) 834
PagI TCATGA 1 cut(s) 981
PaqCI CACCTGC 1 cut(s) 1169
PciI ACATGT 1 cut(s) 954
PciSI GCTCTTC 1 cut(s) 507
PctI GAATGC 1 cut(s) 1208
PdmI GAANNNNTTC 1 cut(s) 989
PfeI GAWTC 6 cut(s) 455, 550, 874, 990, 1224, 1333
PfoI TCCNGGA 1 cut(s) 912
PkrI GCNGC 7 cut(s) 93, 259, 1003, 1102, 1105, 1108, 1157
PleI GAGTC 1 cut(s) 131
PpsI GAGTC 1 cut(s) 131
PscI ACATGT 1 cut(s) 954
PshBI ATTAAT 1 cut(s) 129
Psp124BI GAGCTC 2 cut(s) 151, 1053
Psp6I CCWGG 3 cut(s) 107, 245, 912
PspFI CCCAGC 1 cut(s) 771
PspGI CCWGG 3 cut(s) 107, 245, 912
PspN4I GGNNCC 2 cut(s) 73, 312
PstI CTGCAG 1 cut(s) 1111
PstNI CAGNNNCTG 1 cut(s) 1161
PsuI RGATCY 3 cut(s) 223, 300, 580
PvuII CAGCTG 1 cut(s) 618
RsaI GTAC 4 cut(s) 73, 1067, 1274, 1279
RsaNI GTAC 4 cut(s) 72, 1066, 1273, 1278
RseI CAYNNNNRTG 1 cut(s) 47
SacI GAGCTC 2 cut(s) 151, 1053
SapI GCTCTTC 1 cut(s) 507
SaqAI TTAA 4 cut(s) 129, 171, 951, 1043
SatI GCNGC 7 cut(s) 92, 258, 1002, 1101, 1104, 1107, 1156
Sau3AI GATC 5 cut(s) 33, 223, 300, 580, 1020
ScaI AGTACT 1 cut(s) 1274
SchI GAGTC 1 cut(s) 132
ScrFI CCNGG 3 cut(s) 109, 247, 914
SduI GDGCHC 5 cut(s) 151, 435, 705, 1053, 1266
SfaNI GCATC 1 cut(s) 921
SfcI CTRYAG 3 cut(s) 595, 1107, 1343
SmiMI CAYNNNNRTG 1 cut(s) 47
SmlI CTYRAG 2 cut(s) 995, 1207
SmoI CTYRAG 2 cut(s) 995, 1207
SphI GCATGC 1 cut(s) 834
Sse9I AATT 5 cut(s) 251, 264, 383, 681, 1303
SsiI CCGC 2 cut(s) 91, 554
SspMI CTAG 1 cut(s) 62
SstI GAGCTC 2 cut(s) 151, 1053
StyD4I CCNGG 3 cut(s) 107, 245, 912
StyI CCWWGG 1 cut(s) 306
TaaI ACNGT 5 cut(s) 23, 536, 745, 781, 1277
TaqI TCGA 3 cut(s) 288, 1023, 1047
TasI AATT 5 cut(s) 251, 264, 383, 681, 1303
TatI WGTACW 2 cut(s) 1272, 1277
TauI GCSGC 1 cut(s) 94
TfiI GAWTC 6 cut(s) 455, 550, 874, 990, 1224, 1333
Tru1I TTAA 4 cut(s) 129, 171, 951, 1043
Tru9I TTAA 4 cut(s) 129, 171, 951, 1043
TscAI CASTG 1 cut(s) 1123
TseFI GTSAC 1 cut(s) 650
TseI GCWGC 6 cut(s) 257, 1001, 1100, 1103, 1106, 1155
Tsp45I GTSAC 1 cut(s) 650
TspDTI ATGAA 5 cut(s) 213, 342, 396, 970, 998
TspGWI ACGGA 1 cut(s) 434
TspRI CASTG 1 cut(s) 1123
VneI GTGCAC 2 cut(s) 701, 1262
VspI ATTAAT 1 cut(s) 129
XapI RAATTY 3 cut(s) 251, 383, 1303
XceI RCATGY 2 cut(s) 834, 958
XmiI GTMKAC 3 cut(s) 375, 567, 1113
XmnI GAANNNNTTC 1 cut(s) 989
XspI CTAG 1 cut(s) 62
ZrmI AGTACT 1 cut(s) 1274
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.