Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0007347

Physical Location & Seq

Genomic Coordinates Forward (+)

18551981 .. 18554893

Gene Structure 2913 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G196300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1149 bp

ATGGCCCTTAACTCGGAGTTCACAGAAGGCACCGAAGCGGCCAACTCTCTCCAGTCTATCTGCTACAAGCGTGGCTCGCTTCAGCTACTCGATCAGAGGAAGCTACCTCTGCAAACCACATACTTGGATATCCGAGACTCCACAGATGGATGGCATGCGATCAAAGATATGGTGGTGCGCGGTGCGCCTGCCATTGCCATTGCTGCAGCTCTGTCCTTGGCTGTAGAAGTGTTTAACTTGGAGGATTTCAATGGAACACCCGATGAAGCGTTTTCTTTCATTGTAATGAAATTGGAATATCTGGTCTCCAGCCGACCAACTGCTGTCAATCTTTCAGATGCTTCAGCTAAACTAAGACAAATTGCATCCACGGTAGCTGCTGCAACTTCGGATGCGAAGAATGTGTTTGAGGCTTTTATAGAAGCTTCTGAAATTATGCTCAAGGACGATGTTGCTTCAAACAAGGCTATTGGGTCTTATGGAGCAAGTTTCATTCAGCACCTACTGGAAAACTCTAAGAGCATTTCTATGTTGACCCATTGCAACACTGGCAGTCTTGCATCAGCTGGTTATGGTACTGCCCTTGGTGTTATACGTTCACTTCATACTGAAGGAGTGTTAGAAAGGGCCTATTGTACAGAGACACGCCCATTCAACCAAGGATCCCGACTTACAGCATTTGAGTTGGTGCATGATAACATACCTGCCACTCTTGTAGTAGATTCGGCTGCAGCTGCATTAATGAAAGATGGACGTGTGAATGCTGTAGTTGTTGGAGCAGATCGTGTTGCTGCAAATGGTGACACTGCGAACAAGATTGGGACCTACAGTCTTGCCGTAAGCGCAAAGTACCATAACATTCCATTTTTTGTCGCGGCACCACTCACTTCCGTCGACTTGGCTCTTTCTTCTGGACAAGAGATAATAATAGAGGAAAGATCTCCAAAGGAATTGTTGCACTCACAAGGGGGACTCGGGGAACAAGTTGCTGCATCTGGAATCTCTGTCTGGAACCCAGCGTTTGATGTTACCCCTGCTAATCTAATTGCCGGCATCATAACAGAGAAGGGTGTCATAACAAAAAAGGGCACCGATGCTTTCGACATAAAGGGTTTTGTTCAGAAGGCAGCCTTGCAGTCCGGTGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000096 GO:0000097 GO:0000302 GO:0003674 GO:0003824 GO:0005575 GO:0005911 GO:0006082 GO:0006520 GO:0006555 GO:0006790 GO:0006807 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009066 GO:0009067 GO:0009086 GO:0009506 GO:0009719 GO:0009723 GO:0009725 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0016053 GO:0016853 GO:0016860 GO:0016861 GO:0017144 GO:0019509 GO:0019752 GO:0030054 GO:0032870 GO:0033554 GO:0034599 GO:0034614 GO:0035690 GO:0042221 GO:0042493 GO:0043094 GO:0043102 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044272 GO:0044281 GO:0044283 GO:0046394 GO:0046523 GO:0050896 GO:0051716 GO:0055044 GO:0070887 GO:0071241 GO:0071248 GO:0071265 GO:0071267 GO:0071281 GO:0071310 GO:0071369 GO:0071495 GO:0071704 GO:0071731 GO:0071732 GO:0097366 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902170

KEGG Pathways

Metabolic & Signaling

ko00270 ko01100 map00270 map01100

Pfam Domains

Protein Families

IF-2B

Protein Analysis

383

Amino Acids

40.39

Weight (kDa)

5.25

Isoelectric Point (pI)

36.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007347)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G05830 AT2G05830 AT2G05830 AT2G05830
fragaria_vesca	FvH4_1g08940
malus_domestica	MD02G1094700.v1.1 MD15G1219600.v1.1
prunus_persica	Prupe.7G196300_v2.0.a1 Prupe.7G196300_v2.0.a1
pyrus_communis	pycom02g07490 pycom15g19470
rosa_chinensis	RchiOBHm_Chr2g0095391
rosa_laevigata	RLG00000016561
rosa_multiflora	Rmu_ssc0000183.1_g000040 Rmu_ssc0000183.1_g000041 Rmu_ssc0000183.1_g000042
rosa_roxburghii	Rroxscaffold_2G00146410
rosa_rugosa	Rorug02G0050400
rosa_samantha	Rh2AG098600 Rh2BG099800 Rh2CG101800 Rh2CG105700 Rh2DG099400
rosa_wichuraiana	Rw2G007440 Rw2G007730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	712
AccB1I	GGYRCC	3 cut(s)	29, 877, 1088
AccI	GTMKAC	1 cut(s)	894
AccII	CGCG	2 cut(s)	180, 875
AciI	CCGC	3 cut(s)	38, 180, 875
AclWI	GGATC	2 cut(s)	657, 670
AcoI	YGGCCR	1 cut(s)	39
AcuI	CTGAAG	3 cut(s)	65, 327, 630
AfaI	GTAC	3 cut(s)	577, 637, 851
AfiI	CCNNNNNNNGG	1 cut(s)	13
AflIII	ACRYGT	1 cut(s)	754
AgsI	TTSAA	3 cut(s)	250, 459, 655
AhdI	GACNNNNNGTC	1 cut(s)	828
AjiI	CACGTC	1 cut(s)	755
AluBI	AGCT	8 cut(s)	85, 103, 209, 347, 377, 425, 566, 734
AluI	AGCT	8 cut(s)	85, 103, 209, 347, 377, 425, 566, 734
Alw26I	GTCTC	3 cut(s)	129, 310, 635
AlwI	GGATC	2 cut(s)	657, 670
Ama87I	CYCGRG	1 cut(s)	974
AoxI	GGCC	3 cut(s)	3, 39, 627
AseI	ATTAAT	1 cut(s)	740
AspLEI	GCGC	3 cut(s)	180, 187, 845
AspS9I	GGNCC	3 cut(s)	4, 627, 822
AsuHPI	GGTGA	1 cut(s)	812
AvaI	CYCGRG	1 cut(s)	974
AvaII	GGWCC	1 cut(s)	822
BaeGI	GKGCMC	1 cut(s)	1091
BamHI	GGATCC	1 cut(s)	662
BanI	GGYRCC	3 cut(s)	29, 877, 1088
BccI	CCATC	3 cut(s)	140, 144, 743
BceAI	ACGGC	1 cut(s)	821
BcoDI	GTCTC	3 cut(s)	129, 310, 635
BfmI	CTRYAG	5 cut(s)	204, 222, 729, 765, 826
BfuAI	ACCTGC	1 cut(s)	712
BglII	AGATCT	1 cut(s)	938
Bme18I	GGWCC	1 cut(s)	822
BmeRI	GACNNNNNGTC	1 cut(s)	828
BmeT110I	CYCGRG	1 cut(s)	974
BmgBI	CACGTC	1 cut(s)	755
BmgT120I	GGNCC	3 cut(s)	4, 627, 822
BmiI	GGNNCC	6 cut(s)	31, 664, 823, 879, 1013, 1090
BmsI	GCATC	7 cut(s)	328, 374, 382, 569, 1001, 1062, 1084
BpmI	CTGGAG	2 cut(s)	35, 292
BpuEI	CTTGAG	1 cut(s)	425
BsaI	GGTCTC	1 cut(s)	310
BsaJI	CCNNGG	4 cut(s)	216, 369, 583, 658
BsaWI	WCCGGW	1 cut(s)	1139
Bsc4I	CCNNNNNNNGG	1 cut(s)	13
Bse118I	RCCGGY	1 cut(s)	1049
Bse1I	ACTGG	3 cut(s)	52, 510, 553
Bse3DI	GCAATG	3 cut(s)	192, 198, 538
BseDI	CCNNGG	4 cut(s)	216, 369, 583, 658
BseGI	GGATG	3 cut(s)	155, 365, 397
BseLI	CCNNNNNNNGG	1 cut(s)	13
BseMI	GCAATG	3 cut(s)	192, 198, 538
BseNI	ACTGG	3 cut(s)	52, 510, 553
BseSI	GKGCMC	1 cut(s)	1091
BseYI	CCCAGC	1 cut(s)	1015
Bsh1236I	CGCG	2 cut(s)	180, 875
BshFI	GGCC	3 cut(s)	5, 41, 629
BshNI	GGYRCC	3 cut(s)	29, 877, 1088
BsiHKCI	CYCGRG	1 cut(s)	974
BsiSI	CCGG	2 cut(s)	1050, 1140
BslFI	GGGAC	2 cut(s)	835, 984
BslI	CCNNNNNNNGG	1 cut(s)	13
BsmAI	GTCTC	3 cut(s)	129, 310, 635
BsmFI	GGGAC	2 cut(s)	835, 984
BsmI	GAATGC	1 cut(s)	766
BsnI	GGCC	3 cut(s)	5, 41, 629
Bso31I	GGTCTC	1 cut(s)	310
BsoBI	CYCGRG	1 cut(s)	974
Bsp1286I	GDGCHC	1 cut(s)	1091
Bsp1407I	TGTACA	1 cut(s)	635
Bsp143I	GATC	5 cut(s)	91, 159, 662, 781, 938
BspACI	CCGC	3 cut(s)	38, 180, 875
BspANI	GGCC	3 cut(s)	5, 41, 629
BspFNI	CGCG	2 cut(s)	180, 875
BspLI	GGNNCC	6 cut(s)	31, 664, 823, 879, 1013, 1090
BspMAI	CTGCAG	2 cut(s)	208, 733
BspMI	ACCTGC	1 cut(s)	712
BspPI	GGATC	2 cut(s)	657, 670
BspT107I	GGYRCC	3 cut(s)	29, 877, 1088
BspTNI	GGTCTC	1 cut(s)	310
BsrDI	GCAATG	3 cut(s)	192, 198, 538
BsrFI	RCCGGY	1 cut(s)	1049
BsrGI	TGTACA	1 cut(s)	635
BsrI	ACTGG	3 cut(s)	52, 510, 553
BssAI	RCCGGY	1 cut(s)	1049
BssECI	CCNNGG	4 cut(s)	216, 369, 583, 658
BssMI	GATC	5 cut(s)	91, 159, 662, 781, 938
BssT1I	CCWWGG	3 cut(s)	216, 583, 658
Bst4CI	ACNGT	2 cut(s)	373, 830
BstAUI	TGTACA	1 cut(s)	635
BstC8I	GCNNGC	4 cut(s)	77, 156, 189, 1051
BstDEI	CTNAG	2 cut(s)	353, 516
BstDSI	CCRYGG	1 cut(s)	369
BstF5I	GGATG	3 cut(s)	155, 365, 397
BstFNI	CGCG	2 cut(s)	180, 875
BstHHI	GCGC	3 cut(s)	180, 187, 845
BstKTI	GATC	5 cut(s)	94, 162, 665, 784, 941
BstMAI	GTCTC	3 cut(s)	129, 310, 635
BstMBI	GATC	5 cut(s)	91, 159, 662, 781, 938
BstMWI	GCNNNNNNNGC	7 cut(s)	76, 109, 184, 203, 549, 734, 842
BstNSI	RCATGY	1 cut(s)	158
BstSFI	CTRYAG	5 cut(s)	204, 222, 729, 765, 826
BstSLI	GKGCMC	1 cut(s)	1091
BstUI	CGCG	2 cut(s)	180, 875
BstX2I	RGATCY	2 cut(s)	662, 938
BstXI	CCANNNNNNTGG	1 cut(s)	124
BstYI	RGATCY	2 cut(s)	662, 938
BsuRI	GGCC	3 cut(s)	5, 41, 629
BtgI	CCRYGG	1 cut(s)	369
BtrI	CACGTC	1 cut(s)	755
BtsCI	GGATG	3 cut(s)	155, 365, 397
BtsI	GCAGTG	1 cut(s)	804
BtsIMutI	CAGTG	2 cut(s)	546, 804
BveI	ACCTGC	1 cut(s)	712
Cac8I	GCNNGC	4 cut(s)	77, 156, 189, 1051
CfoI	GCGC	3 cut(s)	180, 187, 845
Cfr10I	RCCGGY	1 cut(s)	1049
Cfr13I	GGNCC	3 cut(s)	4, 627, 822
Csp6I	GTAC	3 cut(s)	576, 636, 850
CviAII	CATG	2 cut(s)	155, 692
CviQI	GTAC	3 cut(s)	576, 636, 850
DdeI	CTNAG	2 cut(s)	353, 516
DpnI	GATC	5 cut(s)	93, 161, 664, 783, 940
DpnII	GATC	5 cut(s)	91, 159, 662, 781, 938
DriI	GACNNNNNGTC	1 cut(s)	828
EaeI	YGGCCR	1 cut(s)	39
Eam1105I	GACNNNNNGTC	1 cut(s)	828
Eco130I	CCWWGG	3 cut(s)	216, 583, 658
Eco31I	GGTCTC	1 cut(s)	310
Eco32I	GATATC	1 cut(s)	130
Eco47I	GGWCC	1 cut(s)	822
Eco57I	CTGAAG	3 cut(s)	65, 327, 630
Eco88I	CYCGRG	1 cut(s)	974
EcoO109I	RGGNCCY	2 cut(s)	627, 822
EcoRV	GATATC	1 cut(s)	130
EcoT14I	CCWWGG	3 cut(s)	216, 583, 658
ErhI	CCWWGG	3 cut(s)	216, 583, 658
FaeI	CATG	2 cut(s)	158, 695
FalI	AAGNNNNNCTT	2 cut(s)	1115, 1147
FaqI	GGGAC	2 cut(s)	835, 984
FatI	CATG	2 cut(s)	154, 691
FblI	GTMKAC	1 cut(s)	894
FokI	GGATG	3 cut(s)	162, 352, 404
GlaI	GCGC	3 cut(s)	179, 186, 844
GsaI	CCCAGC	1 cut(s)	1019
GsuI	CTGGAG	2 cut(s)	35, 292
HaeIII	GGCC	3 cut(s)	5, 41, 629
HapII	CCGG	2 cut(s)	1050, 1140
HhaI	GCGC	3 cut(s)	180, 187, 845
Hin1II	CATG	2 cut(s)	158, 695
Hin6I	GCGC	3 cut(s)	178, 185, 843
HinP1I	GCGC	3 cut(s)	178, 185, 843
HincII	GTYRAC	2 cut(s)	534, 895
HindII	GTYRAC	2 cut(s)	534, 895
HindIII	AAGCTT	1 cut(s)	423
HinfI	GANTC	4 cut(s)	137, 722, 972, 999
HpaII	CCGG	2 cut(s)	1050, 1140
HphI	GGTGA	1 cut(s)	812
Hpy166II	GTNNAC	4 cut(s)	21, 534, 599, 895
Hpy188I	TCNGA	7 cut(s)	16, 96, 134, 337, 391, 430, 1122
Hpy188III	TCNNGA	4 cut(s)	666, 912, 996, 1009
Hpy8I	GTNNAC	4 cut(s)	21, 534, 599, 895
Hpy99I	CGWCG	1 cut(s)	896
HpyAV	CCTTC	4 cut(s)	20, 605, 1060, 1117
HpyCH4III	ACNGT	2 cut(s)	373, 830
HpyCH4IV	ACGT	2 cut(s)	595, 754
HpyF10VI	GCNNNNNNNGC	7 cut(s)	76, 109, 184, 203, 549, 734, 842
HpyF3I	CTNAG	2 cut(s)	353, 516
HpySE526I	ACGT	2 cut(s)	595, 754
Hsp92II	CATG	2 cut(s)	158, 695
HspAI	GCGC	3 cut(s)	178, 185, 843
KroI	GCCGGC	1 cut(s)	1049
KroNI	GCCGGC	1 cut(s)	1051
Kzo9I	GATC	5 cut(s)	91, 159, 662, 781, 938
LmnI	GCTCC	2 cut(s)	482, 776
LweI	GCATC	7 cut(s)	328, 374, 382, 569, 1001, 1062, 1084
MaeII	ACGT	2 cut(s)	595, 754
MaeIII	GTNAC	2 cut(s)	800, 1027
MalI	GATC	5 cut(s)	93, 161, 664, 783, 940
MboI	GATC	5 cut(s)	91, 159, 662, 781, 938
MboII	GAAGA	2 cut(s)	409, 900
MflI	RGATCY	2 cut(s)	662, 938
MhlI	GDGCHC	1 cut(s)	1091
MluCI	AATT	5 cut(s)	290, 360, 432, 950, 1044
MlyI	GAGTC	2 cut(s)	131, 966
MmeI	TCCRAC	1 cut(s)	754
MnlI	CCTC	5 cut(s)	90, 117, 235, 403, 925
MroNI	GCCGGC	1 cut(s)	1049
MseI	TTAA	3 cut(s)	9, 234, 740
MslI	CAYNNNNRTG	2 cut(s)	284, 527
MspA1I	CMGCKG	2 cut(s)	566, 734
MspI	CCGG	2 cut(s)	1050, 1140
Mva1269I	GAATGC	1 cut(s)	766
MvnI	CGCG	2 cut(s)	180, 875
MwoI	GCNNNNNNNGC	7 cut(s)	76, 109, 184, 203, 549, 734, 842
NaeI	GCCGGC	1 cut(s)	1051
NdeII	GATC	5 cut(s)	91, 159, 662, 781, 938
NgoMIV	GCCGGC	1 cut(s)	1049
NlaIII	CATG	2 cut(s)	158, 695
NlaIV	GGNNCC	6 cut(s)	31, 664, 823, 879, 1013, 1090
NmuCI	GTSAC	1 cut(s)	800
NspI	RCATGY	1 cut(s)	158
PaeI	GCATGC	1 cut(s)	158
PctI	GAATGC	1 cut(s)	766
PdiI	GCCGGC	1 cut(s)	1051
PfeI	GAWTC	2 cut(s)	722, 999
PleI	GAGTC	2 cut(s)	131, 966
PpsI	GAGTC	2 cut(s)	131, 966
PpuMI	RGGWCCY	1 cut(s)	822
PshBI	ATTAAT	1 cut(s)	740
Psp5II	RGGWCCY	1 cut(s)	822
PspFI	CCCAGC	1 cut(s)	1015
PspN4I	GGNNCC	6 cut(s)	31, 664, 823, 879, 1013, 1090
PspPI	GGNCC	3 cut(s)	4, 627, 822
PspPPI	RGGWCCY	1 cut(s)	822
PstI	CTGCAG	2 cut(s)	208, 733
PsuI	RGATCY	2 cut(s)	662, 938
PvuII	CAGCTG	2 cut(s)	566, 734
RsaI	GTAC	3 cut(s)	577, 637, 851
RsaNI	GTAC	3 cut(s)	576, 636, 850
RseI	CAYNNNNRTG	2 cut(s)	284, 527
SalI	GTCGAC	1 cut(s)	893
SaqAI	TTAA	3 cut(s)	9, 234, 740
Sau3AI	GATC	5 cut(s)	91, 159, 662, 781, 938
Sau96I	GGNCC	3 cut(s)	4, 627, 822
SchI	GAGTC	2 cut(s)	131, 966
SduI	GDGCHC	1 cut(s)	1091
SfaNI	GCATC	7 cut(s)	328, 374, 382, 569, 1001, 1062, 1084
SfcI	CTRYAG	5 cut(s)	204, 222, 729, 765, 826
SinI	GGWCC	1 cut(s)	822
SmiMI	CAYNNNNRTG	2 cut(s)	284, 527
SmlI	CTYRAG	1 cut(s)	440
SmoI	CTYRAG	1 cut(s)	440
SphI	GCATGC	1 cut(s)	158
Sse9I	AATT	5 cut(s)	290, 360, 432, 950, 1044
SsiI	CCGC	3 cut(s)	38, 180, 875
StyI	CCWWGG	3 cut(s)	216, 583, 658
TaaI	ACNGT	2 cut(s)	373, 830
TaiI	ACGT	2 cut(s)	598, 757
TaqI	TCGA	3 cut(s)	90, 894, 1101
TasI	AATT	5 cut(s)	290, 360, 432, 950, 1044
TatI	WGTACW	1 cut(s)	635
TauI	GCSGC	2 cut(s)	41, 878
TfiI	GAWTC	2 cut(s)	722, 999
Tru1I	TTAA	3 cut(s)	9, 234, 740
Tru9I	TTAA	3 cut(s)	9, 234, 740
TscAI	CASTG	2 cut(s)	553, 811
TseFI	GTSAC	1 cut(s)	800
Tsp45I	GTSAC	1 cut(s)	800
TspDTI	ATGAA	6 cut(s)	268, 279, 302, 481, 593, 758
TspGWI	ACGGA	1 cut(s)	880
TspRI	CASTG	2 cut(s)	553, 811
VpaK11BI	GGWCC	1 cut(s)	822
VspI	ATTAAT	1 cut(s)	740
XceI	RCATGY	1 cut(s)	158
XcmI	CCANNNNNNNNNTGG	1 cut(s)	545
XmiI	GTMKAC	1 cut(s)	894

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.