Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0007592

Physical Location & Seq

Genomic Coordinates Forward (+)

19621619 .. 19622829

Gene Structure 1211 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G217700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 396 bp

ATGTCGTGGCAAACGTACGTAGACGACCATCTGATGTGCGAAATTGAAGGCAACCACCTCTCTGCCGCCGCCATCATCGGCCACGACGGCAGCGTTTGGGCCCAGAGCGCCACTTTCCCTCAGTTGAAGCCTGAAGAAGTGACTGGCATTCTGAATGACTTCAATGAACCTGGTTCACTTGCCCCAACTGGGTTGTATCTTGGAGGCACAAAGTACATGGTCATCCAAGGAGAGCCAGGAGCTGTCATTAGAGGAAAGAAGGGACCAGGTGGTGTTACTGTCAAGAAGAGCACTCTTGCTTTGCTGATTGGCATTTATGATGAGCCAATGACTCCTGGCCAATGCAACATGATTGTTGAAAGGCTTGGTGATTATCTGGTTGAGCAGGGTCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003779 GO:0003785 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005938 GO:0008064 GO:0008092 GO:0008104 GO:0008150 GO:0009987 GO:0010639 GO:0015629 GO:0016043 GO:0030832 GO:0030833 GO:0030837 GO:0031333 GO:0032271 GO:0032272 GO:0032507 GO:0032535 GO:0032956 GO:0032970 GO:0033036 GO:0033043 GO:0034613 GO:0042989 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043254 GO:0044087 GO:0044424 GO:0044444 GO:0044464 GO:0045185 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051128 GO:0051129 GO:0051179 GO:0051235 GO:0051493 GO:0051494 GO:0051641 GO:0051651 GO:0065007 GO:0065008 GO:0070727 GO:0071840 GO:0071944 GO:0090066 GO:0099568 GO:0110053 GO:1902903 GO:1902904

KEGG Pathways

Metabolic & Signaling

ko04013 ko04015 ko04810 ko05131 ko05132 map04013 map04015 map04810 map05131 map05132

Pfam Domains

Protein Families

Profilin

Protein Analysis

132

Amino Acids

14.02

Weight (kDa)

4.73

Isoelectric Point (pI)

30.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007592)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19760 AT4G29350 AT5G56600 AT5G56600
fragaria_vesca	FvH4_1g06461
malus_domestica	MD02G1067900.v1.1 MD15G1199500.v1.1
prunus_persica	Prupe.7G217700_v2.0.a1 Prupe.7G217700_v2.0.a1
pyrus_communis	pycom15g17700
rosa_chinensis	RchiOBHm_Chr2g0092211
rosa_laevigata	RLG00000016286
rosa_multiflora	Rmu_sc0000524.1_g000024 Rmu_sc0005722.1_g000009
rosa_roxburghii	Rroxscaffold_2G00149370
rosa_rugosa	Rorug02G0023700
rosa_samantha	Rh2BG069000 Rh4DG181000 Rh5DG465700
rosa_wichuraiana	Rw2G006270 Rw3G005780 Rw5G025200 Rw5G032250 Rw6G007270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	21
AciI	CCGC	2 cut(s)	66, 69
AcoI	YGGCCR	2 cut(s)	79, 337
AcuI	CTGAAG	1 cut(s)	153
AfaI	GTAC	2 cut(s)	17, 215
AfiI	CCNNNNNNNGG	1 cut(s)	189
AgsI	TTSAA	4 cut(s)	47, 127, 163, 359
AjnI	CCWGG	4 cut(s)	169, 235, 265, 334
AluBI	AGCT	1 cut(s)	242
AluI	AGCT	1 cut(s)	242
Alw21I	GWGCWC	1 cut(s)	293
AlwNI	CAGNNNCTG	1 cut(s)	242
AoxI	GGCC	3 cut(s)	79, 99, 337
ApaI	GGGCCC	1 cut(s)	103
ApeKI	GCWGC	1 cut(s)	90
Asp700I	GAANNNNTTC	1 cut(s)	158
AspLEI	GCGC	1 cut(s)	110
AspS9I	GGNCC	3 cut(s)	99, 100, 263
AsuHPI	GGTGA	1 cut(s)	380
AvaII	GGWCC	1 cut(s)	263
BaeGI	GKGCMC	1 cut(s)	103
BalI	TGGCCA	1 cut(s)	339
BanII	GRGCYC	1 cut(s)	103
Bbv12I	GWGCWC	1 cut(s)	293
BbvI	GCAGC	1 cut(s)	102
BccI	CCATC	2 cut(s)	36, 80
BceAI	ACGGC	1 cut(s)	103
BciT130I	CCWGG	4 cut(s)	171, 237, 267, 336
BfaI	CTAG	1 cut(s)	394
BfoI	RGCGCY	1 cut(s)	111
BglI	GCCNNNNNGGC	1 cut(s)	87
BisI	GCNGC	3 cut(s)	66, 69, 91
BlsI	GCNGC	3 cut(s)	67, 70, 92
Bme1390I	CCNGG	4 cut(s)	171, 237, 267, 336
Bme18I	GGWCC	1 cut(s)	263
BmgT120I	GGNCC	3 cut(s)	99, 100, 263
BmiI	GGNNCC	2 cut(s)	101, 264
BmrFI	CCNGG	4 cut(s)	171, 237, 267, 336
BmrI	ACTGGG	1 cut(s)	198
BmuI	ACTGGG	1 cut(s)	198
BsaAI	YACGTR	1 cut(s)	19
BsaJI	CCNNGG	1 cut(s)	226
Bsc4I	CCNNNNNNNGG	1 cut(s)	189
Bse1I	ACTGG	2 cut(s)	148, 193
BseBI	CCWGG	4 cut(s)	171, 237, 267, 336
BseDI	CCNNGG	1 cut(s)	226
BseGI	GGATG	1 cut(s)	222
BseLI	CCNNNNNNNGG	1 cut(s)	189
BseMII	CTCAG	1 cut(s)	134
BseNI	ACTGG	2 cut(s)	148, 193
BseSI	GKGCMC	1 cut(s)	103
BseXI	GCAGC	1 cut(s)	102
BshFI	GGCC	3 cut(s)	81, 101, 339
BsiHKAI	GWGCWC	1 cut(s)	293
BsiWI	CGTACG	1 cut(s)	15
BslFI	GGGAC	1 cut(s)	276
BslI	CCNNNNNNNGG	1 cut(s)	189
BsmFI	GGGAC	1 cut(s)	276
BsmI	GAATGC	1 cut(s)	147
BsnI	GGCC	3 cut(s)	81, 101, 339
Bsp120I	GGGCCC	1 cut(s)	99
Bsp1286I	GDGCHC	2 cut(s)	103, 293
BspACI	CCGC	2 cut(s)	66, 69
BspANI	GGCC	3 cut(s)	81, 101, 339
BspCNI	CTCAG	1 cut(s)	133
BspLI	GGNNCC	2 cut(s)	101, 264
BspQI	GCTCTTC	1 cut(s)	281
BsrI	ACTGG	2 cut(s)	148, 193
BssECI	CCNNGG	1 cut(s)	226
BssT1I	CCWWGG	1 cut(s)	226
Bst2UI	CCWGG	4 cut(s)	171, 237, 267, 336
Bst4CI	ACNGT	1 cut(s)	280
Bst6I	CTCTTC	1 cut(s)	281
BstBAI	YACGTR	1 cut(s)	19
BstDEI	CTNAG	1 cut(s)	120
BstF5I	GGATG	1 cut(s)	222
BstH2I	RGCGCY	1 cut(s)	111
BstHHI	GCGC	1 cut(s)	110
BstMWI	GCNNNNNNNGC	2 cut(s)	87, 107
BstNI	CCWGG	4 cut(s)	171, 237, 267, 336
BstSCI	CCNGG	4 cut(s)	169, 235, 265, 334
BstSLI	GKGCMC	1 cut(s)	103
BstSNI	TACGTA	1 cut(s)	19
BstV1I	GCAGC	1 cut(s)	102
BsuRI	GGCC	3 cut(s)	81, 101, 339
BtsCI	GGATG	1 cut(s)	222
CaiI	CAGNNNCTG	1 cut(s)	242
CfoI	GCGC	1 cut(s)	110
Cfr13I	GGNCC	3 cut(s)	99, 100, 263
CsiI	ACCWGGT	2 cut(s)	169, 265
Csp6I	GTAC	2 cut(s)	16, 214
CviAII	CATG	2 cut(s)	217, 349
CviJI	RGCY	8 cut(s)	81, 101, 130, 235, 242, 325, 339, 364
CviKI_1	RGCY	8 cut(s)	81, 101, 130, 235, 242, 325, 339, 364
CviQI	GTAC	2 cut(s)	16, 214
DdeI	CTNAG	1 cut(s)	120
EaeI	YGGCCR	2 cut(s)	79, 337
Eam1104I	CTCTTC	1 cut(s)	281
EarI	CTCTTC	1 cut(s)	281
Eco105I	TACGTA	1 cut(s)	19
Eco130I	CCWWGG	1 cut(s)	226
Eco24I	GRGCYC	1 cut(s)	103
Eco47I	GGWCC	1 cut(s)	263
Eco57I	CTGAAG	1 cut(s)	153
EcoRII	CCWGG	4 cut(s)	169, 235, 265, 334
EcoT14I	CCWWGG	1 cut(s)	226
EcoT38I	GRGCYC	1 cut(s)	103
ErhI	CCWWGG	1 cut(s)	226
FaeI	CATG	2 cut(s)	220, 352
FaiI	YATR	3 cut(s)	218, 318, 350
FaqI	GGGAC	1 cut(s)	276
FatI	CATG	2 cut(s)	216, 348
FblI	GTMKAC	1 cut(s)	21
Fnu4HI	GCNGC	3 cut(s)	66, 69, 91
FokI	GGATG	1 cut(s)	209
FriOI	GRGCYC	1 cut(s)	103
Fsp4HI	GCNGC	3 cut(s)	66, 69, 91
FspBI	CTAG	1 cut(s)	394
GlaI	GCGC	1 cut(s)	109
GluI	GCNGC	3 cut(s)	66, 69, 91
HaeII	RGCGCY	1 cut(s)	111
HaeIII	GGCC	3 cut(s)	81, 101, 339
HhaI	GCGC	1 cut(s)	110
Hin1II	CATG	2 cut(s)	220, 352
Hin6I	GCGC	1 cut(s)	108
HinP1I	GCGC	1 cut(s)	108
HinfI	GANTC	1 cut(s)	331
HphI	GGTGA	1 cut(s)	380
Hpy166II	GTNNAC	2 cut(s)	22, 176
Hpy188I	TCNGA	2 cut(s)	33, 153
Hpy188III	TCNNGA	1 cut(s)	283
Hpy8I	GTNNAC	2 cut(s)	22, 176
Hpy99I	CGWCG	1 cut(s)	89
HpyAV	CCTTC	2 cut(s)	41, 253
HpyCH4III	ACNGT	1 cut(s)	280
HpyCH4IV	ACGT	2 cut(s)	14, 18
HpyCH4V	TGCA	1 cut(s)	345
HpyF10VI	GCNNNNNNNGC	2 cut(s)	87, 107
HpyF3I	CTNAG	1 cut(s)	120
HpySE526I	ACGT	2 cut(s)	14, 18
Hsp92II	CATG	2 cut(s)	220, 352
HspAI	GCGC	1 cut(s)	108
LguI	GCTCTTC	1 cut(s)	281
LmnI	GCTCC	1 cut(s)	239
Lsp1109I	GCAGC	1 cut(s)	102
MabI	ACCWGGT	2 cut(s)	169, 265
MaeI	CTAG	1 cut(s)	394
MaeII	ACGT	2 cut(s)	14, 18
MaeIII	GTNAC	2 cut(s)	139, 274
MboII	GAAGA	2 cut(s)	146, 298
MhlI	GDGCHC	2 cut(s)	103, 293
MlsI	TGGCCA	1 cut(s)	339
MluCI	AATT	1 cut(s)	42
MluNI	TGGCCA	1 cut(s)	339
MlyI	GAGTC	1 cut(s)	325
MnlI	CCTC	4 cut(s)	68, 129, 197, 245
Mox20I	TGGCCA	1 cut(s)	339
MroXI	GAANNNNTTC	1 cut(s)	158
MscI	TGGCCA	1 cut(s)	339
Msp20I	TGGCCA	1 cut(s)	339
MspR9I	CCNGG	4 cut(s)	171, 237, 267, 336
Mva1269I	GAATGC	1 cut(s)	147
MvaI	CCWGG	4 cut(s)	171, 237, 267, 336
MwoI	GCNNNNNNNGC	2 cut(s)	87, 107
NlaIII	CATG	2 cut(s)	220, 352
NlaIV	GGNNCC	2 cut(s)	101, 264
NmuCI	GTSAC	1 cut(s)	139
PciSI	GCTCTTC	1 cut(s)	281
PcsI	WCGNNNNNNNCGW	2 cut(s)	11, 90
PctI	GAATGC	1 cut(s)	147
PdmI	GAANNNNTTC	1 cut(s)	158
Pfl23II	CGTACG	1 cut(s)	15
PkrI	GCNGC	3 cut(s)	67, 70, 92
PleI	GAGTC	1 cut(s)	325
PpsI	GAGTC	1 cut(s)	325
Ppu21I	YACGTR	1 cut(s)	19
Psp6I	CCWGG	4 cut(s)	169, 235, 265, 334
PspGI	CCWGG	4 cut(s)	169, 235, 265, 334
PspLI	CGTACG	1 cut(s)	15
PspN4I	GGNNCC	2 cut(s)	101, 264
PspOMI	GGGCCC	1 cut(s)	99
PspPI	GGNCC	3 cut(s)	99, 100, 263
PstNI	CAGNNNCTG	1 cut(s)	242
RsaI	GTAC	2 cut(s)	17, 215
RsaNI	GTAC	2 cut(s)	16, 214
SapI	GCTCTTC	1 cut(s)	281
SatI	GCNGC	3 cut(s)	66, 69, 91
Sau96I	GGNCC	3 cut(s)	99, 100, 263
SchI	GAGTC	1 cut(s)	325
ScrFI	CCNGG	4 cut(s)	171, 237, 267, 336
SduI	GDGCHC	2 cut(s)	103, 293
SetI	ASST	6 cut(s)	17, 21, 60, 172, 244, 271
SexAI	ACCWGGT	2 cut(s)	169, 265
SinI	GGWCC	1 cut(s)	263
SnaBI	TACGTA	1 cut(s)	19
Sse9I	AATT	1 cut(s)	42
SsiI	CCGC	2 cut(s)	66, 69
SspMI	CTAG	1 cut(s)	394
StyD4I	CCNGG	4 cut(s)	169, 235, 265, 334
StyI	CCWWGG	1 cut(s)	226
TaaI	ACNGT	1 cut(s)	280
TaiI	ACGT	2 cut(s)	17, 21
TasI	AATT	1 cut(s)	42
TatI	WGTACW	1 cut(s)	213
TauI	GCSGC	2 cut(s)	68, 71
TseFI	GTSAC	1 cut(s)	139
TseI	GCWGC	1 cut(s)	90
Tsp45I	GTSAC	1 cut(s)	139
TspDTI	ATGAA	1 cut(s)	180
VpaK11BI	GGWCC	1 cut(s)	263
XmiI	GTMKAC	1 cut(s)	21
XmnI	GAANNNNTTC	1 cut(s)	158
XspI	CTAG	1 cut(s)	394

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.