Leucine rich repeat
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G24480 AT4G13340 |
| fragaria_vesca | FvH4_1g05180 FvH4_1g05180 FvH4_1g05180 FvH4_1g05180 |
| malus_domestica | MD09G1216000.v1.1 MD15G1188400.v1.1 |
| prunus_persica | Prupe.5G056300_v2.0.a1 Prupe.7G228100_v2.0.a1 |
| pyrus_communis | pycom02g04230 pycom15g16890 |
| rosa_chinensis | RchiOBHm_Chr2g0090891 |
| rosa_laevigata | RLG00000016154 |
| rosa_multiflora | Rmu_co8180576.1_g000001 Rmu_sc0000792.1_g000014 Rmu_sc0014837.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00150760 |
| rosa_rugosa | Rorug02G0010800 |
| rosa_samantha | Rh2AG057100 Rh2BG055600 Rh2CG057900 Rh2DG056500 |
| rosa_wichuraiana | Rw2G005230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 934 |
| AccI | GTMKAC | 2 cut(s) | 222, 2011 |
| AccII | CGCG | 1 cut(s) | 2258 |
| AclWI | GGATC | 2 cut(s) | 343, 639 |
| AcsI | RAATTY | 3 cut(s) | 623, 1051, 1663 |
| AcuI | CTGAAG | 1 cut(s) | 590 |
| AcyI | GRCGYC | 1 cut(s) | 693 |
| AfaI | GTAC | 6 cut(s) | 98, 443, 1841, 1919, 1953, 2071 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 232, 408, 934, 2243 |
| AflIII | ACRYGT | 2 cut(s) | 819, 2256 |
| AgeI | ACCGGT | 2 cut(s) | 1333, 2035 |
| AgsI | TTSAA | 4 cut(s) | 532, 643, 925, 2042 |
| AjnI | CCWGG | 1 cut(s) | 810 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 659, 691, 770, 802 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 623, 655 |
| Alw21I | GWGCWC | 4 cut(s) | 91, 133, 558, 1694 |
| Alw26I | GTCTC | 3 cut(s) | 763, 944, 2265 |
| AlwI | GGATC | 2 cut(s) | 343, 639 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 867 |
| Ama87I | CYCGRG | 1 cut(s) | 594 |
| AoxI | GGCC | 6 cut(s) | 990, 1145, 1157, 1190, 1640, 2224 |
| ApaI | GGGCCC | 1 cut(s) | 2228 |
| ApoI | RAATTY | 3 cut(s) | 623, 1051, 1663 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1160, 1192 |
| AsiGI | ACCGGT | 2 cut(s) | 1333, 2035 |
| AspLEI | GCGC | 2 cut(s) | 168, 1153 |
| AspS9I | GGNCC | 5 cut(s) | 864, 991, 1641, 2224, 2225 |
| AsuC2I | CCSGG | 1 cut(s) | 1295 |
| AsuII | TTCGAA | 1 cut(s) | 651 |
| AvaI | CYCGRG | 1 cut(s) | 594 |
| AvaII | GGWCC | 1 cut(s) | 864 |
| BaeGI | GKGCMC | 2 cut(s) | 666, 2228 |
| BanII | GRGCYC | 4 cut(s) | 133, 558, 1694, 2228 |
| BbsI | GAAGAC | 2 cut(s) | 17, 355 |
| Bbv12I | GWGCWC | 4 cut(s) | 91, 133, 558, 1694 |
| BceAI | ACGGC | 2 cut(s) | 127, 808 |
| BciT130I | CCWGG | 1 cut(s) | 812 |
| BciVI | GTATCC | 1 cut(s) | 1806 |
| BcnI | CCSGG | 1 cut(s) | 1295 |
| BcoDI | GTCTC | 3 cut(s) | 763, 944, 2265 |
| BfaI | CTAG | 4 cut(s) | 212, 380, 1023, 1188 |
| BfmI | CTRYAG | 2 cut(s) | 181, 1046 |
| BfoI | RGCGCY | 1 cut(s) | 169 |
| BfuI | GTATCC | 1 cut(s) | 1806 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1144 |
| BglII | AGATCT | 1 cut(s) | 472 |
| BmcAI | AGTACT | 1 cut(s) | 1919 |
| Bme1390I | CCNGG | 2 cut(s) | 812, 1295 |
| Bme18I | GGWCC | 1 cut(s) | 864 |
| BmeT110I | CYCGRG | 1 cut(s) | 594 |
| BmgT120I | GGNCC | 5 cut(s) | 864, 991, 1641, 2224, 2225 |
| BmiI | GGNNCC | 3 cut(s) | 1278, 1643, 2226 |
| BmrFI | CCNGG | 2 cut(s) | 812, 1295 |
| BmrI | ACTGGG | 1 cut(s) | 1829 |
| BmsI | GCATC | 1 cut(s) | 879 |
| BmuI | ACTGGG | 1 cut(s) | 1829 |
| BpiI | GAAGAC | 2 cut(s) | 17, 355 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 577, 609 |
| BpmI | CTGGAG | 1 cut(s) | 1347 |
| Bpu10I | CCTNAGC | 1 cut(s) | 90 |
| Bpu14I | TTCGAA | 1 cut(s) | 651 |
| BpuEI | CTTGAG | 2 cut(s) | 524, 878 |
| BpuMI | CCSGG | 1 cut(s) | 1295 |
| BsaHI | GRCGYC | 1 cut(s) | 693 |
| BsaI | GGTCTC | 1 cut(s) | 763 |
| BsaJI | CCNNGG | 9 cut(s) | 124, 202, 424, 593, 666, 790, 811, 1040, 1293 |
| BsaWI | WCCGGW | 3 cut(s) | 356, 1333, 2035 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 232, 408, 934, 2243 |
| Bse118I | RCCGGY | 7 cut(s) | 754, 1079, 1090, 1147, 1159, 1333, 2035 |
| Bse1I | ACTGG | 5 cut(s) | 928, 1364, 1835, 1843, 2007 |
| Bse3DI | GCAATG | 2 cut(s) | 432, 2228 |
| BseBI | CCWGG | 1 cut(s) | 812 |
| BseDI | CCNNGG | 9 cut(s) | 124, 202, 424, 593, 666, 790, 811, 1040, 1293 |
| BseGI | GGATG | 4 cut(s) | 393, 894, 969, 2095 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 232, 408, 934, 2243 |
| BseMI | GCAATG | 2 cut(s) | 432, 2228 |
| BseMII | CTCAG | 2 cut(s) | 104, 626 |
| BseNI | ACTGG | 5 cut(s) | 928, 1364, 1835, 1843, 2007 |
| BseRI | GAGGAG | 7 cut(s) | 52, 164, 893, 1236, 1239, 1734, 2253 |
| BseSI | GKGCMC | 2 cut(s) | 666, 2228 |
| BseYI | CCCAGC | 3 cut(s) | 407, 437, 581 |
| BsgI | GTGCAG | 1 cut(s) | 352 |
| Bsh1236I | CGCG | 1 cut(s) | 2258 |
| Bsh1285I | CGRYCG | 1 cut(s) | 202 |
| BshFI | GGCC | 6 cut(s) | 992, 1147, 1159, 1192, 1642, 2226 |
| BshTI | ACCGGT | 2 cut(s) | 1333, 2035 |
| BsiEI | CGRYCG | 1 cut(s) | 202 |
| BsiHKAI | GWGCWC | 4 cut(s) | 91, 133, 558, 1694 |
| BsiHKCI | CYCGRG | 1 cut(s) | 594 |
| BslFI | GGGAC | 5 cut(s) | 200, 526, 670, 1024, 1831 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 232, 408, 934, 2243 |
| BsmAI | GTCTC | 3 cut(s) | 763, 944, 2265 |
| BsmBI | CGTCTC | 2 cut(s) | 944, 2265 |
| BsmFI | GGGAC | 5 cut(s) | 200, 526, 670, 1024, 1831 |
| BsnI | GGCC | 6 cut(s) | 992, 1147, 1159, 1192, 1642, 2226 |
| Bso31I | GGTCTC | 1 cut(s) | 763 |
| BsoBI | CYCGRG | 1 cut(s) | 594 |
| Bsp119I | TTCGAA | 1 cut(s) | 651 |
| Bsp120I | GGGCCC | 1 cut(s) | 2224 |
| Bsp1286I | GDGCHC | 6 cut(s) | 91, 133, 558, 666, 1694, 2228 |
| Bsp143I | GATC | 7 cut(s) | 25, 335, 415, 472, 631, 727, 837 |
| Bsp19I | CCATGG | 2 cut(s) | 124, 424 |
| BspANI | GGCC | 6 cut(s) | 992, 1147, 1159, 1192, 1642, 2226 |
| BspCNI | CTCAG | 2 cut(s) | 103, 627 |
| BspFNI | CGCG | 1 cut(s) | 2258 |
| BspLI | GGNNCC | 3 cut(s) | 1278, 1643, 2226 |
| BspMAI | CTGCAG | 1 cut(s) | 1050 |
| BspPI | GGATC | 2 cut(s) | 343, 639 |
| BspQI | GCTCTTC | 1 cut(s) | 447 |
| BspT104I | TTCGAA | 1 cut(s) | 651 |
| BspTNI | GGTCTC | 1 cut(s) | 763 |
| BsrDI | GCAATG | 2 cut(s) | 432, 2228 |
| BsrFI | RCCGGY | 7 cut(s) | 754, 1079, 1090, 1147, 1159, 1333, 2035 |
| BsrI | ACTGG | 5 cut(s) | 928, 1364, 1835, 1843, 2007 |
| BssAI | RCCGGY | 7 cut(s) | 754, 1079, 1090, 1147, 1159, 1333, 2035 |
| BssECI | CCNNGG | 9 cut(s) | 124, 202, 424, 593, 666, 790, 811, 1040, 1293 |
| BssMI | GATC | 7 cut(s) | 25, 335, 415, 472, 631, 727, 837 |
| BssNI | GRCGYC | 1 cut(s) | 693 |
| BssT1I | CCWWGG | 3 cut(s) | 124, 424, 666 |
| Bst2UI | CCWGG | 1 cut(s) | 812 |
| Bst6I | CTCTTC | 1 cut(s) | 447 |
| BstACI | GRCGYC | 1 cut(s) | 693 |
| BstBI | TTCGAA | 1 cut(s) | 651 |
| BstDEI | CTNAG | 2 cut(s) | 90, 635 |
| BstDSI | CCRYGG | 3 cut(s) | 124, 424, 790 |
| BstF5I | GGATG | 4 cut(s) | 393, 894, 969, 2095 |
| BstFNI | CGCG | 1 cut(s) | 2258 |
| BstH2I | RGCGCY | 1 cut(s) | 169 |
| BstHHI | GCGC | 2 cut(s) | 168, 1153 |
| BstKTI | GATC | 7 cut(s) | 28, 338, 418, 475, 634, 730, 840 |
| BstMAI | GTCTC | 3 cut(s) | 763, 944, 2265 |
| BstMBI | GATC | 7 cut(s) | 25, 335, 415, 472, 631, 727, 837 |
| BstMCI | CGRYCG | 1 cut(s) | 202 |
| BstNI | CCWGG | 1 cut(s) | 812 |
| BstNSI | RCATGY | 1 cut(s) | 823 |
| BstSCI | CCNGG | 2 cut(s) | 810, 1293 |
| BstSFI | CTRYAG | 2 cut(s) | 181, 1046 |
| BstSLI | GKGCMC | 2 cut(s) | 666, 2228 |
| BstUI | CGCG | 1 cut(s) | 2258 |
| BstV2I | GAAGAC | 2 cut(s) | 17, 355 |
| BstX2I | RGATCY | 3 cut(s) | 335, 472, 631 |
| BstYI | RGATCY | 3 cut(s) | 335, 472, 631 |
| BsuI | GTATCC | 1 cut(s) | 1806 |
| BsuRI | GGCC | 6 cut(s) | 992, 1147, 1159, 1192, 1642, 2226 |
| BtgI | CCRYGG | 3 cut(s) | 124, 424, 790 |
| BtgZI | GCGATG | 5 cut(s) | 1479, 1509, 1545, 1581, 1605 |
| BtsCI | GGATG | 4 cut(s) | 393, 894, 969, 2095 |
| BtsIMutI | CAGTG | 2 cut(s) | 1842, 2060 |
| CaiI | CAGNNNCTG | 1 cut(s) | 867 |
| CfoI | GCGC | 2 cut(s) | 168, 1153 |
| Cfr10I | RCCGGY | 7 cut(s) | 754, 1079, 1090, 1147, 1159, 1333, 2035 |
| Cfr13I | GGNCC | 5 cut(s) | 864, 991, 1641, 2224, 2225 |
| CseI | GACGC | 2 cut(s) | 701, 2247 |
| Csp6I | GTAC | 6 cut(s) | 97, 442, 1840, 1918, 1952, 2070 |
| CspAI | ACCGGT | 2 cut(s) | 1333, 2035 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 4, 39, 1928, 1963 |
| CviAII | CATG | 5 cut(s) | 125, 425, 820, 1908, 2117 |
| CviQI | GTAC | 6 cut(s) | 97, 442, 1840, 1918, 1952, 2070 |
| DdeI | CTNAG | 2 cut(s) | 90, 635 |
| DpnI | GATC | 7 cut(s) | 27, 337, 417, 474, 633, 729, 839 |
| DpnII | GATC | 7 cut(s) | 25, 335, 415, 472, 631, 727, 837 |
| Eam1104I | CTCTTC | 1 cut(s) | 447 |
| EarI | CTCTTC | 1 cut(s) | 447 |
| EciI | GGCGGA | 3 cut(s) | 1242, 1248, 2256 |
| Ecl136II | GAGCTC | 3 cut(s) | 131, 556, 1692 |
| Eco130I | CCWWGG | 3 cut(s) | 124, 424, 666 |
| Eco147I | AGGCCT | 1 cut(s) | 1192 |
| Eco24I | GRGCYC | 4 cut(s) | 133, 558, 1694, 2228 |
| Eco31I | GGTCTC | 1 cut(s) | 763 |
| Eco32I | GATATC | 1 cut(s) | 562 |
| Eco47I | GGWCC | 1 cut(s) | 864 |
| Eco53kI | GAGCTC | 3 cut(s) | 131, 556, 1692 |
| Eco57I | CTGAAG | 1 cut(s) | 590 |
| Eco88I | CYCGRG | 1 cut(s) | 594 |
| EcoICRI | GAGCTC | 3 cut(s) | 131, 556, 1692 |
| EcoO109I | RGGNCCY | 2 cut(s) | 864, 2224 |
| EcoRII | CCWGG | 1 cut(s) | 810 |
| EcoRV | GATATC | 1 cut(s) | 562 |
| EcoT14I | CCWWGG | 3 cut(s) | 124, 424, 666 |
| EcoT38I | GRGCYC | 4 cut(s) | 133, 558, 1694, 2228 |
| ErhI | CCWWGG | 3 cut(s) | 124, 424, 666 |
| Esp3I | CGTCTC | 2 cut(s) | 944, 2265 |
| FaeI | CATG | 5 cut(s) | 128, 428, 823, 1911, 2120 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 533, 565, 1166, 1198 |
| FaqI | GGGAC | 5 cut(s) | 200, 526, 670, 1024, 1831 |
| FatI | CATG | 5 cut(s) | 124, 424, 819, 1907, 2116 |
| FauI | CCCGC | 2 cut(s) | 315, 503 |
| FblI | GTMKAC | 2 cut(s) | 222, 2011 |
| FokI | GGATG | 4 cut(s) | 380, 901, 976, 2082 |
| FriOI | GRGCYC | 4 cut(s) | 133, 558, 1694, 2228 |
| FspBI | CTAG | 4 cut(s) | 212, 380, 1023, 1188 |
| GlaI | GCGC | 2 cut(s) | 167, 1152 |
| GsaI | CCCAGC | 3 cut(s) | 411, 441, 585 |
| GsuI | CTGGAG | 1 cut(s) | 1347 |
| HaeII | RGCGCY | 1 cut(s) | 169 |
| HaeIII | GGCC | 6 cut(s) | 992, 1147, 1159, 1192, 1642, 2226 |
| HgaI | GACGC | 2 cut(s) | 701, 2247 |
| HhaI | GCGC | 2 cut(s) | 168, 1153 |
| Hin1I | GRCGYC | 1 cut(s) | 693 |
| Hin1II | CATG | 5 cut(s) | 128, 428, 823, 1911, 2120 |
| Hin6I | GCGC | 2 cut(s) | 166, 1151 |
| HinP1I | GCGC | 2 cut(s) | 166, 1151 |
| HincII | GTYRAC | 1 cut(s) | 223 |
| HindII | GTYRAC | 1 cut(s) | 223 |
| HindIII | AAGCTT | 1 cut(s) | 279 |
| HinfI | GANTC | 3 cut(s) | 252, 360, 1015 |
| Hpy166II | GTNNAC | 7 cut(s) | 223, 1220, 1369, 1840, 1952, 2012, 2168 |
| Hpy188I | TCNGA | 6 cut(s) | 257, 304, 335, 398, 636, 846 |
| Hpy188III | TCNNGA | 4 cut(s) | 92, 241, 745, 895 |
| Hpy8I | GTNNAC | 7 cut(s) | 223, 1220, 1369, 1840, 1952, 2012, 2168 |
| Hpy99I | CGWCG | 2 cut(s) | 224, 2160 |
| HpyAV | CCTTC | 9 cut(s) | 58, 647, 1242, 1251, 1290, 1401, 1455, 1895, 1902 |
| HpyCH4V | TGCA | 4 cut(s) | 348, 369, 470, 1048 |
| HpyF3I | CTNAG | 2 cut(s) | 90, 635 |
| Hsp92I | GRCGYC | 1 cut(s) | 693 |
| Hsp92II | CATG | 5 cut(s) | 128, 428, 823, 1911, 2120 |
| HspAI | GCGC | 2 cut(s) | 166, 1151 |
| KroI | GCCGGC | 2 cut(s) | 1147, 1159 |
| KroNI | GCCGGC | 2 cut(s) | 1149, 1161 |
| Kzo9I | GATC | 7 cut(s) | 25, 335, 415, 472, 631, 727, 837 |
| LguI | GCTCTTC | 1 cut(s) | 447 |
| LmnI | GCTCC | 6 cut(s) | 128, 177, 395, 670, 976, 1687 |
| LweI | GCATC | 1 cut(s) | 879 |
| MaeI | CTAG | 4 cut(s) | 212, 380, 1023, 1188 |
| MaeIII | GTNAC | 1 cut(s) | 214 |
| MalI | GATC | 7 cut(s) | 27, 337, 417, 474, 633, 729, 839 |
| MboI | GATC | 7 cut(s) | 25, 335, 415, 472, 631, 727, 837 |
| MboII | GAAGA | 8 cut(s) | 16, 19, 22, 29, 355, 464, 596, 1066 |
| MfeI | CAATTG | 1 cut(s) | 2181 |
| MflI | RGATCY | 3 cut(s) | 335, 472, 631 |
| MhlI | GDGCHC | 6 cut(s) | 91, 133, 558, 666, 1694, 2228 |
| MluCI | AATT | 9 cut(s) | 325, 623, 1051, 1129, 1663, 1723, 1785, 2111, 2181 |
| MluI | ACGCGT | 1 cut(s) | 2256 |
| MlyI | GAGTC | 1 cut(s) | 369 |
| MmeI | TCCRAC | 3 cut(s) | 313, 327, 522 |
| MroNI | GCCGGC | 2 cut(s) | 1147, 1159 |
| MseI | TTAA | 1 cut(s) | 312 |
| MslI | CAYNNNNRTG | 2 cut(s) | 845, 1906 |
| MspA1I | CMGCKG | 1 cut(s) | 610 |
| MspR9I | CCNGG | 2 cut(s) | 812, 1295 |
| MunI | CAATTG | 1 cut(s) | 2181 |
| MvaI | CCWGG | 1 cut(s) | 812 |
| MvnI | CGCG | 1 cut(s) | 2258 |
| NaeI | GCCGGC | 2 cut(s) | 1149, 1161 |
| NciI | CCSGG | 1 cut(s) | 1295 |
| NcoI | CCATGG | 2 cut(s) | 124, 424 |
| NdeII | GATC | 7 cut(s) | 25, 335, 415, 472, 631, 727, 837 |
| NgoMIV | GCCGGC | 2 cut(s) | 1147, 1159 |
| NlaIII | CATG | 5 cut(s) | 128, 428, 823, 1911, 2120 |
| NlaIV | GGNNCC | 3 cut(s) | 1278, 1643, 2226 |
| NmeAIII | GCCGAG | 1 cut(s) | 1065 |
| NmuCI | GTSAC | 1 cut(s) | 214 |
| NspI | RCATGY | 1 cut(s) | 823 |
| NspV | TTCGAA | 1 cut(s) | 651 |
| PceI | AGGCCT | 1 cut(s) | 1192 |
| PciI | ACATGT | 1 cut(s) | 819 |
| PciSI | GCTCTTC | 1 cut(s) | 447 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 195 |
| PdiI | GCCGGC | 2 cut(s) | 1149, 1161 |
| PfeI | GAWTC | 2 cut(s) | 252, 1015 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 934 |
| PinAI | ACCGGT | 2 cut(s) | 1333, 2035 |
| PleI | GAGTC | 1 cut(s) | 368 |
| PpsI | GAGTC | 1 cut(s) | 368 |
| PpuMI | RGGWCCY | 1 cut(s) | 864 |
| PscI | ACATGT | 1 cut(s) | 819 |
| Psp124BI | GAGCTC | 3 cut(s) | 133, 558, 1694 |
| Psp5II | RGGWCCY | 1 cut(s) | 864 |
| Psp6I | CCWGG | 1 cut(s) | 810 |
| PspFI | CCCAGC | 3 cut(s) | 407, 437, 581 |
| PspGI | CCWGG | 1 cut(s) | 810 |
| PspN4I | GGNNCC | 3 cut(s) | 1278, 1643, 2226 |
| PspOMI | GGGCCC | 1 cut(s) | 2224 |
| PspPI | GGNCC | 5 cut(s) | 864, 991, 1641, 2224, 2225 |
| PspPPI | RGGWCCY | 1 cut(s) | 864 |
| PstI | CTGCAG | 1 cut(s) | 1050 |
| PstNI | CAGNNNCTG | 1 cut(s) | 867 |
| PsuI | RGATCY | 3 cut(s) | 335, 472, 631 |
| PvuII | CAGCTG | 1 cut(s) | 610 |
| RsaI | GTAC | 6 cut(s) | 98, 443, 1841, 1919, 1953, 2071 |
| RsaNI | GTAC | 6 cut(s) | 97, 442, 1840, 1918, 1952, 2070 |
| RseI | CAYNNNNRTG | 2 cut(s) | 845, 1906 |
| SacI | GAGCTC | 3 cut(s) | 133, 558, 1694 |
| SalI | GTCGAC | 1 cut(s) | 221 |
| SapI | GCTCTTC | 1 cut(s) | 447 |
| SaqAI | TTAA | 1 cut(s) | 312 |
| Sau3AI | GATC | 7 cut(s) | 25, 335, 415, 472, 631, 727, 837 |
| Sau96I | GGNCC | 5 cut(s) | 864, 991, 1641, 2224, 2225 |
| ScaI | AGTACT | 1 cut(s) | 1919 |
| SchI | GAGTC | 1 cut(s) | 369 |
| ScrFI | CCNGG | 2 cut(s) | 812, 1295 |
| SduI | GDGCHC | 6 cut(s) | 91, 133, 558, 666, 1694, 2228 |
| SfaNI | GCATC | 1 cut(s) | 879 |
| SfcI | CTRYAG | 2 cut(s) | 181, 1046 |
| SfuI | TTCGAA | 1 cut(s) | 651 |
| SgrAI | CRCCGGYG | 2 cut(s) | 1079, 1090 |
| SinI | GGWCC | 1 cut(s) | 864 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 845, 1906 |
| SmlI | CTYRAG | 2 cut(s) | 539, 893 |
| SmoI | CTYRAG | 2 cut(s) | 539, 893 |
| Sse9I | AATT | 9 cut(s) | 325, 623, 1051, 1129, 1663, 1723, 1785, 2111, 2181 |
| SseBI | AGGCCT | 1 cut(s) | 1192 |
| SspMI | CTAG | 4 cut(s) | 212, 380, 1023, 1188 |
| SstI | GAGCTC | 3 cut(s) | 133, 558, 1694 |
| StuI | AGGCCT | 1 cut(s) | 1192 |
| StyD4I | CCNGG | 2 cut(s) | 810, 1293 |
| StyI | CCWWGG | 3 cut(s) | 124, 424, 666 |
| TaqI | TCGA | 8 cut(s) | 222, 240, 558, 651, 678, 726, 824, 1116 |
| TaqII | GACCGA | 1 cut(s) | 216 |
| TasI | AATT | 9 cut(s) | 325, 623, 1051, 1129, 1663, 1723, 1785, 2111, 2181 |
| TatI | WGTACW | 3 cut(s) | 1917, 1951, 2069 |
| TauI | GCSGC | 6 cut(s) | 1090, 1166, 1264, 1267, 1642, 2179 |
| TfiI | GAWTC | 2 cut(s) | 252, 1015 |
| Tru1I | TTAA | 1 cut(s) | 312 |
| Tru9I | TTAA | 1 cut(s) | 312 |
| TscAI | CASTG | 2 cut(s) | 1842, 2067 |
| TseFI | GTSAC | 1 cut(s) | 214 |
| Tsp45I | GTSAC | 1 cut(s) | 214 |
| TspDTI | ATGAA | 6 cut(s) | 17, 691, 863, 2129, 2205, 2241 |
| TspGWI | ACGGA | 1 cut(s) | 1782 |
| TspRI | CASTG | 2 cut(s) | 1842, 2067 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 934 |
| VpaK11BI | GGWCC | 1 cut(s) | 864 |
| XapI | RAATTY | 3 cut(s) | 623, 1051, 1663 |
| XceI | RCATGY | 1 cut(s) | 823 |
| XmiI | GTMKAC | 2 cut(s) | 222, 2011 |
| XspI | CTAG | 4 cut(s) | 212, 380, 1023, 1188 |
| ZrmI | AGTACT | 1 cut(s) | 1919 |