Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0007583

Physical Location & Seq

Genomic Coordinates Reverse (-)

4871590 .. 4874534

Gene Structure 2945 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G005230.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2193 bp

ATGAAGAAGAAGACCACTCTCTTTGATTTTTCTCTTCTTCTCCTCACTATTGCCTTCTTCTTTGCTTCTACACTCTCATCATCCAGCCACATTATCAGCCATGGAAGTCTCACCGACGCCGAGGCCCTCTACATCAAGCAGCGGCAGCTGCTCTACTACCGGGACGAGTCCGGCGACCGGGGAGAGATGGTGAAAGTAGACCCTTCTCTGGTTTTCGAAAACAAGAGACTCCGAAATGCTTACATAGCATTGCAAGCTTGGAAGGAGGCTATTCTCTCCGACCCTTTCAATCTCACCGGGGATTGGGTCGGATCTAATGTCTGCAGCTACAGCGGAGTGTTCTGTGCTCGGGCGCCCGACAACAGCTCGATCCTAACCGTCGCCGGCATTGACCTCAACCACGGCGATATTGCTGGCTACTTGCCGGAGGAGCTTGGGCTGCTCACAGATCTCGCATTGTTCCACATCAATTCCAACAGGTTCTGTGGGACTGTGCCGCACAAATTCCGGAACCTGAAGCTGCTTTTCGAGCTGGATATCAGTAACAATCGATTTGCCGGTAAGTTCCCGCATGTTGTGCTTAAGCTTCCTGAGCTGAAATTCTTGGATCTGAGGTTCAATGAGTTCGAGGGGACTGTGCCCAAGGAGCTGTTTGACAAGGACCTGGATGCTATTTTCATCAACGATAACCGGTTCAGGTTCGATCTGCCGGATAATTTCGGGAACTCGCCGGTCTCCGTCATCGTTCTGGCCAACAACAAGTTCCACGGCTGCGTTCCTTCCAGCCTGGGCAACATGTCCAACCTGAAGGAGATTATTCTGATGAACAATGGGTTCAGGTCGTGCTTGCCGGAGGAGGTTGGGATGCTGAAGAACTTGACGGTGTTCGACGTCAGCTACAATCAGTTCTTGGGTTCGCTGCCGGACACAATTGGAGGGATGGTGAGCCTTGAGCAGCTCAATGTGGCTCATAACTTGTTGTCTGGGTCGATTCCGCCGGCTATTTGCACGTTGCCGAGGCTGGAGAACTTCACTTACTCTTATAACTTCTTCACCGGCGAGCCTCCGGTGTGTCTGGCCTTGCCTAGTTTCGATGACAAGCGGAATTGCTTGCCGAATAGGCCGTCACAGAGGTCGGCGGCGCAATGTAAGTCGTTCTTGTCTAAGCCTGTGAACTGCAATTCTTTTGGTTGTAAGCCTTTCACTCCTTCACCTACACCCTCAATTCCTGTTCCTTCACCTCCGGTTGTGACTCCCTCGCCGCCGGTCTTTGTACCCCAATCACCACCACCTCCGCCCTCACCTCCTCCCCCAGTTTCCTCACCCCCGCCTCCTCCGCCGTCTCCGCCACCACCAGTTTTCTCACCACCGCCGCCGCCGCCACCGTCACCTCCACCCCCAGTTTTCTCACCACCGCCTCCACCAGTTTACTCTCCACCACCGCCTCCACCCTCACCTCCTCCCCCAGTTTACTCACCACCTCCACCACCACCCTCACCTCCGCCGCCAGTTTACTTACCACCACCACCTCCTTCGCCTCCGCCACCATCACCTCCCCCTCCAGTTTCCTTGCCGCCACCTTCTCCACCCCCACCATCAGTCTCACCGCCATATTGCGTCCGTTCCCCACCACCACCGCCCCCAAATTCACCTCCACCGCCTTCTCCATTGAGTTCTCCACCTCCACCAGCTCCTTACGTATACTACTCACCCCCGCCTCCTACTCCACATTCACCACCACCACCAATTTATCCTTACTCATCACCTCCACCTCCACCACCTGTCCATTCCCCACCTCCCCCTTCCCCACCTCCTTGTATAGAACCGCCCCCACCACCACCTCCTTGCATTGAATTACCCCCGCCGCCGCCGCCATCACCACCACCATGTCCTGAGTCCTCGCCGCCACCACCACCACCACCTCCCTACCATCACTTGCCACCACCATCTCCTTCACCGCCACCAACACCAGTGTATGAGTCTGCTCCCCCACCTCCGGTCCACCATTCACCACCTCCAGTCCACCATTCACCACCACCACCGGTTTATCAATATAGTTCTCCACCTCCACCAAATTCACCTCCTCCATGTGTTGAAGCAAGCCCGCCGCCTCCCACTCCTGTATATGAGGGCCCATTGCCACCAGTCTTTGGAGTTTCATACGCGTCTCCTCCGCCACCACCCTTCTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005198 GO:0005199 GO:0005575 GO:0005618 GO:0005623 GO:0005911 GO:0009505 GO:0009506 GO:0030054 GO:0030312 GO:0044464 GO:0055044 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8

Protein Analysis

730

Amino Acids

78.32

Weight (kDa)

6.05

Isoelectric Point (pI)

100.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	152 - 208	4.3e-06	Leucine rich repeat
LRR_8	PF13855	268 - 327	9.4e-06	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007583)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24480 AT4G13340
fragaria_vesca	FvH4_1g05180 FvH4_1g05180 FvH4_1g05180 FvH4_1g05180
malus_domestica	MD09G1216000.v1.1 MD15G1188400.v1.1
prunus_persica	Prupe.5G056300_v2.0.a1 Prupe.7G228100_v2.0.a1
pyrus_communis	pycom02g04230 pycom15g16890
rosa_chinensis	RchiOBHm_Chr2g0090891
rosa_laevigata	RLG00000016154
rosa_multiflora	Rmu_co8180576.1_g000001 Rmu_sc0000792.1_g000014 Rmu_sc0014837.1_g000001
rosa_roxburghii	Rroxscaffold_2G00150760
rosa_rugosa	Rorug02G0010800
rosa_samantha	Rh2AG057100 Rh2BG055600 Rh2CG057900 Rh2DG056500
rosa_wichuraiana	Rw2G005230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1044
AatII	GACGTC	1 cut(s)	894
AccB1I	GGYRCC	1 cut(s)	352
AccB7I	CCANNNNNTGG	1 cut(s)	2150
AccI	GTMKAC	2 cut(s)	198, 1701
AccII	CGCG	1 cut(s)	2165
AccIII	TCCGGA	1 cut(s)	507
AclWI	GGATC	3 cut(s)	319, 364, 615
AcoI	YGGCCR	1 cut(s)	750
AcsI	RAATTY	4 cut(s)	503, 599, 1645, 2074
AcuI	CTGAAG	3 cut(s)	536, 827, 890
AcyI	GRCGYC	3 cut(s)	117, 353, 891
AfaI	GTAC	1 cut(s)	1275
AfiI	CCNNNNNNNGG	5 cut(s)	177, 208, 303, 1996, 2150
AflII	CTTAAG	1 cut(s)	581
AflIII	ACRYGT	2 cut(s)	795, 2163
AgeI	ACCGGT	2 cut(s)	690, 2041
AgsI	TTSAA	4 cut(s)	289, 619, 1853, 2096
AjnI	CCWGG	2 cut(s)	663, 786
AjuI	GAANNNNNNNTTGG	2 cut(s)	746, 778
AloI	GAACNNNNNNTCC	2 cut(s)	599, 631
Alw21I	GWGCWC	1 cut(s)	349
Alw26I	GTCTC	6 cut(s)	113, 220, 739, 1347, 1606, 2172
AlwI	GGATC	3 cut(s)	319, 364, 615
AlwNI	CAGNNNCTG	1 cut(s)	483
Ama87I	CYCGRG	1 cut(s)	348
Aor13HI	TCCGGA	1 cut(s)	507
AoxI	GGCC	5 cut(s)	123, 750, 1077, 1121, 2131
ApaI	GGGCCC	1 cut(s)	2135
ApeKI	GCWGC	9 cut(s)	139, 145, 148, 324, 439, 520, 771, 919, 955
ApoI	RAATTY	4 cut(s)	503, 599, 1645, 2074
ArsI	GACNNNNNNTTYG	2 cut(s)	1109, 1141
AsiGI	ACCGGT	2 cut(s)	690, 2041
AspLEI	GCGC	2 cut(s)	355, 1144
AspS9I	GGNCC	5 cut(s)	124, 661, 1999, 2131, 2132
AsuC2I	CCSGG	3 cut(s)	161, 179, 298
AsuII	TTCGAA	1 cut(s)	216
AvaI	CYCGRG	1 cut(s)	348
AvaII	GGWCC	2 cut(s)	661, 1999
BaeGI	GKGCMC	2 cut(s)	642, 2135
BalI	TGGCCA	1 cut(s)	752
BanI	GGYRCC	1 cut(s)	352
BanII	GRGCYC	1 cut(s)	2135
BbsI	GAAGAC	1 cut(s)	17
Bbv12I	GWGCWC	1 cut(s)	349
BbvI	GCAGC	9 cut(s)	135, 151, 157, 336, 426, 507, 758, 906, 967
BccI	CCATC	7 cut(s)	181, 934, 1555, 1603, 1882, 1938, 1954
BceAI	ACGGC	4 cut(s)	418, 784, 1108, 1324
BciT130I	CCWGG	2 cut(s)	665, 788
BcnI	CCSGG	3 cut(s)	161, 179, 298
BcoDI	GTCTC	6 cut(s)	113, 220, 739, 1347, 1606, 2172
BfaI	CTAG	1 cut(s)	1086
BfmI	CTRYAG	2 cut(s)	322, 328
BfoI	RGCGCY	1 cut(s)	356
BfrI	CTTAAG	1 cut(s)	581
BglI	GCCNNNNNGGC	1 cut(s)	1120
BglII	AGATCT	1 cut(s)	448
Bme1390I	CCNGG	5 cut(s)	161, 179, 298, 665, 788
Bme18I	GGWCC	2 cut(s)	661, 1999
BmeT110I	CYCGRG	1 cut(s)	348
BmgT120I	GGNCC	5 cut(s)	124, 661, 1999, 2131, 2132
BmiI	GGNNCC	3 cut(s)	354, 512, 2133
BmrFI	CCNGG	5 cut(s)	161, 179, 298, 665, 788
BmrI	ACTGGG	3 cut(s)	1307, 1394, 1460
BmsI	GCATC	2 cut(s)	658, 855
BmuI	ACTGGG	3 cut(s)	1307, 1394, 1460
BpiI	GAAGAC	1 cut(s)	17
BpmI	CTGGAG	3 cut(s)	1043, 1545, 2001
Bpu10I	CCTNAGC	1 cut(s)	591
Bpu14I	TTCGAA	1 cut(s)	216
BpuEI	CTTGAG	1 cut(s)	971
BpuMI	CCSGG	3 cut(s)	161, 179, 298
Bsa29I	ATCGAT	1 cut(s)	550
BsaAI	YACGTR	1 cut(s)	1699
BsaHI	GRCGYC	3 cut(s)	117, 353, 891
BsaI	GGTCTC	1 cut(s)	739
BsaJI	CCNNGG	9 cut(s)	100, 120, 178, 297, 400, 642, 766, 787, 1016
BsaWI	WCCGGW	6 cut(s)	507, 690, 1066, 1243, 1996, 2041
BsaXI	ACNNNNNCTCC	4 cut(s)	174, 204, 927, 957
Bsc4I	CCNNNNNNNGG	5 cut(s)	177, 208, 303, 1996, 2150
Bse118I	RCCGGY	8 cut(s)	383, 557, 690, 730, 997, 1055, 1264, 2041
Bse3DI	GCAATG	3 cut(s)	248, 1151, 2135
BseAI	TCCGGA	1 cut(s)	507
BseBI	CCWGG	2 cut(s)	665, 788
BseCI	ATCGAT	1 cut(s)	550
BseDI	CCNNGG	9 cut(s)	100, 120, 178, 297, 400, 642, 766, 787, 1016
BseGI	GGATG	4 cut(s)	80, 673, 870, 945
BseLI	CCNNNNNNNGG	5 cut(s)	177, 208, 303, 1996, 2150
BseMI	GCAATG	3 cut(s)	248, 1151, 2135
BseMII	CTCAG	3 cut(s)	582, 602, 1884
BseRI	GAGGAG	8 cut(s)	32, 443, 869, 1296, 1323, 1449, 2073, 2160
BseSI	GKGCMC	2 cut(s)	642, 2135
BseXI	GCAGC	9 cut(s)	135, 151, 157, 336, 426, 507, 758, 906, 967
Bsh1236I	CGCG	1 cut(s)	2165
Bsh1285I	CGRYCG	1 cut(s)	178
BshFI	GGCC	5 cut(s)	125, 752, 1079, 1123, 2133
BshNI	GGYRCC	1 cut(s)	352
BshTI	ACCGGT	2 cut(s)	690, 2041
BshVI	ATCGAT	1 cut(s)	550
BsiEI	CGRYCG	1 cut(s)	178
BsiHKAI	GWGCWC	1 cut(s)	349
BsiHKCI	CYCGRG	1 cut(s)	348
BslFI	GGGAC	3 cut(s)	176, 502, 646
BslI	CCNNNNNNNGG	5 cut(s)	177, 208, 303, 1996, 2150
BsmAI	GTCTC	6 cut(s)	113, 220, 739, 1347, 1606, 2172
BsmBI	CGTCTC	2 cut(s)	1347, 2172
BsmFI	GGGAC	3 cut(s)	176, 502, 646
BsnI	GGCC	5 cut(s)	125, 752, 1079, 1123, 2133
Bso31I	GGTCTC	1 cut(s)	739
BsoBI	CYCGRG	1 cut(s)	348
Bsp119I	TTCGAA	1 cut(s)	216
Bsp120I	GGGCCC	1 cut(s)	2131
Bsp1286I	GDGCHC	3 cut(s)	349, 642, 2135
Bsp13I	TCCGGA	1 cut(s)	507
Bsp143I	GATC	5 cut(s)	311, 369, 448, 607, 703
Bsp19I	CCATGG	1 cut(s)	100
BspANI	GGCC	5 cut(s)	125, 752, 1079, 1123, 2133
BspCNI	CTCAG	3 cut(s)	583, 603, 1885
BspDI	ATCGAT	1 cut(s)	550
BspEI	TCCGGA	1 cut(s)	507
BspFNI	CGCG	1 cut(s)	2165
BspLI	GGNNCC	3 cut(s)	354, 512, 2133
BspMAI	CTGCAG	1 cut(s)	326
BspPI	GGATC	3 cut(s)	319, 364, 615
BspT104I	TTCGAA	1 cut(s)	216
BspT107I	GGYRCC	1 cut(s)	352
BspTI	CTTAAG	1 cut(s)	581
BspTNI	GGTCTC	1 cut(s)	739
BsrDI	GCAATG	3 cut(s)	248, 1151, 2135
BsrFI	RCCGGY	8 cut(s)	383, 557, 690, 730, 997, 1055, 1264, 2041
BssAI	RCCGGY	8 cut(s)	383, 557, 690, 730, 997, 1055, 1264, 2041
BssECI	CCNNGG	9 cut(s)	100, 120, 178, 297, 400, 642, 766, 787, 1016
BssMI	GATC	5 cut(s)	311, 369, 448, 607, 703
BssNAI	GTATAC	1 cut(s)	1702
BssNI	GRCGYC	3 cut(s)	117, 353, 891
BssT1I	CCWWGG	2 cut(s)	100, 642
Bst1107I	GTATAC	1 cut(s)	1702
Bst2UI	CCWGG	2 cut(s)	665, 788
Bst4CI	ACNGT	5 cut(s)	379, 493, 637, 883, 1386
Bst6I	CTCTTC	1 cut(s)	39
BstACI	GRCGYC	3 cut(s)	117, 353, 891
BstAFI	CTTAAG	1 cut(s)	581
BstAPI	GCANNNNNTGC	1 cut(s)	577
BstBAI	YACGTR	1 cut(s)	1699
BstBI	TTCGAA	1 cut(s)	216
BstC8I	GCNNGC	9 cut(s)	255, 385, 415, 848, 999, 1061, 1112, 2101, 2105
BstDEI	CTNAG	4 cut(s)	591, 611, 1164, 1893
BstDSI	CCRYGG	3 cut(s)	100, 400, 766
BstF5I	GGATG	4 cut(s)	80, 673, 870, 945
BstFNI	CGCG	1 cut(s)	2165
BstH2I	RGCGCY	1 cut(s)	356
BstHHI	GCGC	2 cut(s)	355, 1144
BstKTI	GATC	5 cut(s)	314, 372, 451, 610, 706
BstMAI	GTCTC	6 cut(s)	113, 220, 739, 1347, 1606, 2172
BstMBI	GATC	5 cut(s)	311, 369, 448, 607, 703
BstMCI	CGRYCG	1 cut(s)	178
BstNI	CCWGG	2 cut(s)	665, 788
BstNSI	RCATGY	2 cut(s)	575, 799
BstSCI	CCNGG	5 cut(s)	159, 177, 296, 663, 786
BstSFI	CTRYAG	2 cut(s)	322, 328
BstSLI	GKGCMC	2 cut(s)	642, 2135
BstSNI	TACGTA	1 cut(s)	1699
BstUI	CGCG	1 cut(s)	2165
BstV1I	GCAGC	9 cut(s)	135, 151, 157, 336, 426, 507, 758, 906, 967
BstV2I	GAAGAC	1 cut(s)	17
BstX2I	RGATCY	3 cut(s)	311, 448, 607
BstYI	RGATCY	3 cut(s)	311, 448, 607
BstZ17I	GTATAC	1 cut(s)	1702
Bsu15I	ATCGAT	1 cut(s)	550
BsuRI	GGCC	5 cut(s)	125, 752, 1079, 1123, 2133
BsuTUI	ATCGAT	1 cut(s)	550
BtgI	CCRYGG	3 cut(s)	100, 400, 766
BtsCI	GGATG	4 cut(s)	80, 673, 870, 945
BtsIMutI	CAGTG	1 cut(s)	1977
Cac8I	GCNNGC	9 cut(s)	255, 385, 415, 848, 999, 1061, 1112, 2101, 2105
CaiI	CAGNNNCTG	1 cut(s)	483
CfoI	GCGC	2 cut(s)	355, 1144
Cfr10I	RCCGGY	8 cut(s)	383, 557, 690, 730, 997, 1055, 1264, 2041
Cfr13I	GGNCC	5 cut(s)	124, 661, 1999, 2131, 2132
ClaI	ATCGAT	1 cut(s)	550
CseI	GACGC	3 cut(s)	125, 1606, 2154
Csp6I	GTAC	1 cut(s)	1274
CspAI	ACCGGT	2 cut(s)	690, 2041
CspCI	CAANNNNNGTGG	2 cut(s)	4, 39
CviAII	CATG	5 cut(s)	101, 572, 796, 1887, 2088
CviQI	GTAC	1 cut(s)	1274
DdeI	CTNAG	4 cut(s)	591, 611, 1164, 1893
DinI	GGCGCC	1 cut(s)	354
DpnI	GATC	5 cut(s)	313, 371, 450, 609, 705
DpnII	GATC	5 cut(s)	311, 369, 448, 607, 703
EaeI	YGGCCR	1 cut(s)	750
Eam1104I	CTCTTC	1 cut(s)	39
EarI	CTCTTC	1 cut(s)	39
EciI	GGCGGA	7 cut(s)	984, 1284, 1326, 1335, 1491, 1530, 2163
Eco105I	TACGTA	1 cut(s)	1699
Eco130I	CCWWGG	2 cut(s)	100, 642
Eco24I	GRGCYC	1 cut(s)	2135
Eco31I	GGTCTC	1 cut(s)	739
Eco32I	GATATC	1 cut(s)	538
Eco47I	GGWCC	2 cut(s)	661, 1999
Eco57I	CTGAAG	3 cut(s)	536, 827, 890
Eco88I	CYCGRG	1 cut(s)	348
EcoO109I	RGGNCCY	3 cut(s)	124, 661, 2131
EcoRII	CCWGG	2 cut(s)	663, 786
EcoRV	GATATC	1 cut(s)	538
EcoT14I	CCWWGG	2 cut(s)	100, 642
EcoT38I	GRGCYC	1 cut(s)	2135
EgeI	GGCGCC	1 cut(s)	354
EheI	GGCGCC	1 cut(s)	354
ErhI	CCWWGG	2 cut(s)	100, 642
Esp3I	CGTCTC	2 cut(s)	1347, 2172
FaeI	CATG	5 cut(s)	104, 575, 799, 1890, 2091
FalI	AAGNNNNNCTT	2 cut(s)	1142, 1174
FaqI	GGGAC	3 cut(s)	176, 502, 646
FatI	CATG	5 cut(s)	100, 571, 795, 1886, 2087
FauI	CCCGC	5 cut(s)	576, 1335, 1722, 1869, 2112
FblI	GTMKAC	2 cut(s)	198, 1701
FokI	GGATG	4 cut(s)	67, 680, 877, 952
FriOI	GRGCYC	1 cut(s)	2135
FspBI	CTAG	1 cut(s)	1086
GlaI	GCGC	2 cut(s)	354, 1143
GsuI	CTGGAG	3 cut(s)	1043, 1545, 2001
HaeII	RGCGCY	1 cut(s)	356
HaeIII	GGCC	5 cut(s)	125, 752, 1079, 1123, 2133
HgaI	GACGC	3 cut(s)	125, 1606, 2154
HhaI	GCGC	2 cut(s)	355, 1144
Hin1I	GRCGYC	3 cut(s)	117, 353, 891
Hin1II	CATG	5 cut(s)	104, 575, 799, 1890, 2091
Hin6I	GCGC	2 cut(s)	353, 1142
HinP1I	GCGC	2 cut(s)	353, 1142
HindIII	AAGCTT	2 cut(s)	255, 584
HinfI	GANTC	6 cut(s)	167, 228, 991, 1252, 1895, 1979
Hpy166II	GTNNAC	8 cut(s)	199, 1174, 1429, 1471, 1513, 1702, 2002, 2023
Hpy188I	TCNGA	5 cut(s)	233, 280, 311, 612, 822
Hpy188III	TCNNGA	4 cut(s)	508, 590, 721, 1892
Hpy8I	GTNNAC	8 cut(s)	199, 1174, 1429, 1471, 1513, 1702, 2002, 2023
Hpy99I	CGWCG	3 cut(s)	119, 383, 893
HpyCH4III	ACNGT	5 cut(s)	379, 493, 637, 883, 1386
HpyCH4IV	ACGT	3 cut(s)	891, 1010, 1698
HpyCH4V	TGCA	5 cut(s)	253, 324, 1008, 1179, 1848
HpyF3I	CTNAG	4 cut(s)	591, 611, 1164, 1893
HpySE526I	ACGT	3 cut(s)	891, 1010, 1698
Hsp92I	GRCGYC	3 cut(s)	117, 353, 891
Hsp92II	CATG	5 cut(s)	104, 575, 799, 1890, 2091
HspAI	GCGC	2 cut(s)	353, 1142
KasI	GGCGCC	1 cut(s)	352
Kpn2I	TCCGGA	1 cut(s)	507
KroI	GCCGGC	2 cut(s)	383, 997
KroNI	GCCGGC	2 cut(s)	385, 999
Kzo9I	GATC	5 cut(s)	311, 369, 448, 607, 703
LmnI	GCTCC	4 cut(s)	430, 646, 1696, 1990
Lsp1109I	GCAGC	9 cut(s)	135, 151, 157, 336, 426, 507, 758, 906, 967
LweI	GCATC	2 cut(s)	658, 855
MaeI	CTAG	1 cut(s)	1086
MaeII	ACGT	3 cut(s)	891, 1010, 1698
MaeIII	GTNAC	4 cut(s)	542, 1125, 1249, 1386
MalI	GATC	5 cut(s)	313, 371, 450, 609, 705
MboI	GATC	5 cut(s)	311, 369, 448, 607, 703
MboII	GAAGA	8 cut(s)	16, 19, 22, 26, 29, 49, 883, 1042
MfeI	CAATTG	1 cut(s)	930
MflI	RGATCY	3 cut(s)	311, 448, 607
MhlI	GDGCHC	3 cut(s)	349, 642, 2135
MlsI	TGGCCA	1 cut(s)	752
MluI	ACGCGT	1 cut(s)	2163
MluNI	TGGCCA	1 cut(s)	752
Mly113I	GGCGCC	1 cut(s)	353
MlyI	GAGTC	5 cut(s)	176, 222, 1246, 1904, 1988
MmeI	TCCRAC	4 cut(s)	289, 303, 498, 825
Mox20I	TGGCCA	1 cut(s)	752
MroI	TCCGGA	1 cut(s)	507
MroNI	GCCGGC	2 cut(s)	383, 997
MscI	TGGCCA	1 cut(s)	752
MseI	TTAA	1 cut(s)	582
MslI	CAYNNNNRTG	1 cut(s)	1885
Msp20I	TGGCCA	1 cut(s)	752
MspA1I	CMGCKG	3 cut(s)	142, 148, 333
MspCI	CTTAAG	1 cut(s)	581
MspR9I	CCNGG	5 cut(s)	161, 179, 298, 665, 788
MunI	CAATTG	1 cut(s)	930
MvaI	CCWGG	2 cut(s)	665, 788
MvnI	CGCG	1 cut(s)	2165
NaeI	GCCGGC	2 cut(s)	385, 999
NarI	GGCGCC	1 cut(s)	353
NciI	CCSGG	3 cut(s)	161, 179, 298
NcoI	CCATGG	1 cut(s)	100
NdeII	GATC	5 cut(s)	311, 369, 448, 607, 703
NgoMIV	GCCGGC	2 cut(s)	383, 997
NlaIII	CATG	5 cut(s)	104, 575, 799, 1890, 2091
NlaIV	GGNNCC	3 cut(s)	354, 512, 2133
NmeAIII	GCCGAG	2 cut(s)	145, 1041
NmuCI	GTSAC	3 cut(s)	1125, 1249, 1386
NspI	RCATGY	2 cut(s)	575, 799
NspV	TTCGAA	1 cut(s)	216
PciI	ACATGT	1 cut(s)	795
PcsI	WCGNNNNNNNCGW	1 cut(s)	171
PdiI	GCCGGC	2 cut(s)	385, 999
PfeI	GAWTC	1 cut(s)	991
PflMI	CCANNNNNTGG	1 cut(s)	2150
PinAI	ACCGGT	2 cut(s)	690, 2041
PleI	GAGTC	5 cut(s)	175, 222, 1246, 1903, 1987
PluTI	GGCGCC	1 cut(s)	356
PpsI	GAGTC	5 cut(s)	175, 222, 1246, 1903, 1987
Ppu21I	YACGTR	1 cut(s)	1699
PpuMI	RGGWCCY	1 cut(s)	661
PscI	ACATGT	1 cut(s)	795
PsiI	TTATAA	1 cut(s)	1044
Psp5II	RGGWCCY	1 cut(s)	661
Psp6I	CCWGG	2 cut(s)	663, 786
PspGI	CCWGG	2 cut(s)	663, 786
PspN4I	GGNNCC	3 cut(s)	354, 512, 2133
PspOMI	GGGCCC	1 cut(s)	2131
PspPI	GGNCC	5 cut(s)	124, 661, 1999, 2131, 2132
PspPPI	RGGWCCY	1 cut(s)	661
PsrI	GAACNNNNNNTAC	2 cut(s)	1019, 1051
PstI	CTGCAG	1 cut(s)	326
PstNI	CAGNNNCTG	1 cut(s)	483
PsuI	RGATCY	3 cut(s)	311, 448, 607
PvuII	CAGCTG	1 cut(s)	148
RsaI	GTAC	1 cut(s)	1275
RsaNI	GTAC	1 cut(s)	1274
RseI	CAYNNNNRTG	1 cut(s)	1885
SaqAI	TTAA	1 cut(s)	582
Sau3AI	GATC	5 cut(s)	311, 369, 448, 607, 703
Sau96I	GGNCC	5 cut(s)	124, 661, 1999, 2131, 2132
SchI	GAGTC	5 cut(s)	176, 222, 1246, 1904, 1988
ScrFI	CCNGG	5 cut(s)	161, 179, 298, 665, 788
SduI	GDGCHC	3 cut(s)	349, 642, 2135
SfaNI	GCATC	2 cut(s)	658, 855
SfcI	CTRYAG	2 cut(s)	322, 328
SfoI	GGCGCC	1 cut(s)	354
SfuI	TTCGAA	1 cut(s)	216
SgrAI	CRCCGGYG	1 cut(s)	1055
SinI	GGWCC	2 cut(s)	661, 1999
SmiMI	CAYNNNNRTG	1 cut(s)	1885
SmlI	CTYRAG	2 cut(s)	581, 950
SmoI	CTYRAG	2 cut(s)	581, 950
SnaBI	TACGTA	1 cut(s)	1699
SspDI	GGCGCC	1 cut(s)	352
SspMI	CTAG	1 cut(s)	1086
StyD4I	CCNGG	5 cut(s)	159, 177, 296, 663, 786
StyI	CCWWGG	2 cut(s)	100, 642
TaaI	ACNGT	5 cut(s)	379, 493, 637, 883, 1386
TaiI	ACGT	3 cut(s)	894, 1013, 1701
TaqI	TCGA	9 cut(s)	216, 368, 528, 550, 627, 702, 888, 989, 1092
TfiI	GAWTC	1 cut(s)	991
Tru1I	TTAA	1 cut(s)	582
Tru9I	TTAA	1 cut(s)	582
TscAI	CASTG	1 cut(s)	1977
TseFI	GTSAC	3 cut(s)	1125, 1249, 1386
TseI	GCWGC	9 cut(s)	139, 145, 148, 324, 439, 520, 771, 919, 955
Tsp45I	GTSAC	3 cut(s)	1125, 1249, 1386
TspDTI	ATGAA	4 cut(s)	17, 667, 839, 2148
TspGWI	ACGGA	2 cut(s)	727, 1610
TspRI	CASTG	1 cut(s)	1977
Van91I	CCANNNNNTGG	1 cut(s)	2150
Vha464I	CTTAAG	1 cut(s)	581
VpaK11BI	GGWCC	2 cut(s)	661, 1999
XapI	RAATTY	4 cut(s)	503, 599, 1645, 2074
XceI	RCATGY	2 cut(s)	575, 799
XmiI	GTMKAC	2 cut(s)	198, 1701
XspI	CTAG	1 cut(s)	1086
ZraI	GACGTC	1 cut(s)	892

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.