Rroxscaffold_2G00150760

leucine-rich repeat extensin-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0007583
Physical Location & Seq
Reverse (-)
88100487 .. 88102742
2256 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00150760.1

Sequence Viewer

Length: 2256 bp
ATGAAGAAGAAGACTACTCTCTTTGATTTTTCTCTTCTTCTCCTCACTACTGCTTTCTTCTTTGCTTCTACACTCTCATCATCCAGCCACATTATCAGCCATGGAAGTCTCACCGACGCCGAGGCCCTCTACATCAAGCAGCGGCAGCTGCTCTACTACCGGGACGAGTTCGGCGACCGGGGAGAGCTCGTGAAAGTAGACCCTTCTCTGGTTTTCGAAAACAAGAGACTCCGAAATGCTTACATAGCATTGCAAGCTTGGAAGGAGGCTATTCTCTCTGACCCTTTCAATCTCACCGGGGACTGGGTCGGATCTGAGGTCTGCAACTACACTGGGGTGTTCTGTGCTCCGGCGCCCGACAACAGCTCGATCCGAACCGTCGCCGGCATTGACCTCAACCACGGCGATATTGCTGGCTACTTGCCCGAGGAGCTCGGCCTGCTCACAGATCTCGCATTGTTCCACATCAATTCCAACAGGTTCTGTGGGACTGTGCCGCACAAATTCCGGAGCCTGAAGCTGCTTTTCGAGCTCGATATCAGTAACAATCGATTTGCCGGTAAGTTCCCGCATGTTGTGCTTAAGCTCCCGGAGCTGAAATTCTTGGATCTGAGGTTCAATGAGTTCGAGGGGACTGTGCCCAAGGAGCTGTTTGACAAGGACCTGGATGCTATTTTCATCAACCATAACCGGTTCAGGTTCGATCTGCCGGACAATTTCGGGAACTCGCCGGTCTCCGTCATCGTTCTGGCCAACAACAAGTTCCACGGCTGCGTTCCTTCCAGCCTGGGCAACATGTCGAACCTGAACGAGATTATTCTGATGAACAATGGGTTCAGGTCGTGCTTGCCGGAGGAGATTGGGATGCTGAAGAACTTGACGGTGTTCGACGTCAGCTACAATCAGTTCTTGGGTCCGCTGCCGGACACAATTGGAGGGATGGTGAGCCTTGAGCAGCTCAATGTGGCTCATAACTTGCTGTCTGGGTCGATTCCGCCGGCTATTTGCACGTTGCCGAGGTTGGAGAACTTCACTTACTCTTATAACTTCTTCACCGGCGAGCCTCCGGTGTGTCTGGCCTTGCCTAGTTTCGATGACAAGCGGAATTGCTTGCCGAATAGGCCCTTACAGAGGTCGGCGGCGCAATGTAAGTCGTTCTTGTCCAAGCCTGTGAATTGCAATTCTTTTGGCTGTAAGCCTTTCACTCCTTCACCTACACCCTCAATTCCTGTTCCTTCACCTCCTGTTGTGACTCCCTCGCCGCCGGTCTTTATACCCCAATCACCACCACCTCCGCCCTCACCTCCTCCCCCAGTTTTCTCACCCCCACCTCCTCCGCCGTCTCCGCCACCACCAGTTTTCTCACCACCGCCGCCGCCACCGTCACCTCCACCCCCAGTTTTCTCACCACCGCCACCAGTTTACTCTCCACCACCGCCTCCACCCTCACCTCCTCCCCCAGTTTACTCACCACCTCCACCACCACCCTCACCTCCGCCGCCAGTTTACTTACCACCACCACCACCACCTCCTTCGCCTCCGCCACCATCACCTCCCCCGCCAGTCTCCTTGCCGCCACCTTCTCCACCCCCACCATCACCACCTCCACCTTCAGTCTCACCGCCATATTGCGTCCGTTCCCCACCACCACCGCCCCCAAATTCACCTCCACCGCCTTCTCCACCTCCACCAGCTCCTTACGTATACTACTCACCCCCGCCGCCTCCTACTCCACATTCACCACCGCCACCACCACATTCACCACCGCCACCAATTTATCCTTACTCATCACCTCCACCTCCACCGCCTGTCCATTCCCCACCTCCCCCTTCCCCACCTCCTTGTATAGAACCGCCCCCACCACCACCTCCTTGCATTGAATTACCCCCGCCGCCGCCATCACCACCGCCATGTCCTGAGTCCTCGCCGCCACCACCACCGCCATGTCCTGAGTCCTCGCCGCCACCACCACCTCCCTACCATCACTTGCCACCACCATCTCCTTCACCGCCACCAACACCAGTGTATGAGTCTCCGCCCCCACCTCCGGTCCACCATTCACCACCTCCGGTCCACCACCATTCACCACCACCACCACCACCACCGGTTTATCAATACAGTTCTCCACCGCCACCAAATTCACCTCCTCCATGTGTTGAAGCAAGCCCGCCACCTCCCACTCCTGTATATGAGGGCCCATTGCCACCAGTCTTTGGAGTTTCATACGCGTCTCCTCCGCCACCACCCTTCTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005198 GO:0005199 GO:0005575 GO:0005618 GO:0005623 GO:0005911 GO:0009505 GO:0009506 GO:0030054 GO:0030312 GO:0044464 GO:0055044 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8

Protein Analysis

751

Amino Acids

80.64

Weight (kDa)

6.01

Isoelectric Point (pI)

104.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 152 - 208 7.2e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1044
AatII GACGTC 1 cut(s) 894
AccB1I GGYRCC 1 cut(s) 352
AccB7I CCANNNNNTGG 1 cut(s) 2213
AccI GTMKAC 2 cut(s) 198, 1704
AccII CGCG 1 cut(s) 2228
AccIII TCCGGA 1 cut(s) 507
AclWI GGATC 3 cut(s) 319, 364, 615
AcoI YGGCCR 1 cut(s) 750
AcsI RAATTY 4 cut(s) 503, 599, 1660, 2137
AcuI CTGAAG 3 cut(s) 536, 890, 1596
AcyI GRCGYC 3 cut(s) 117, 353, 891
AfiI CCNNNNNNNGG 5 cut(s) 208, 303, 1131, 2047, 2213
AflII CTTAAG 1 cut(s) 581
AflIII ACRYGT 2 cut(s) 795, 2226
AgeI ACCGGT 2 cut(s) 690, 2104
AgsI TTSAA 4 cut(s) 289, 619, 1880, 2159
AjnI CCWGG 2 cut(s) 663, 786
AjuI GAANNNNNNNTTGG 2 cut(s) 746, 778
AleI CACNNNNGTG 1 cut(s) 335
AloI GAACNNNNNNTCC 2 cut(s) 599, 631
Alw21I GWGCWC 4 cut(s) 189, 349, 435, 534
Alw26I GTCTC 8 cut(s) 113, 220, 739, 1347, 1570, 1621, 2037, 2235
AlwI GGATC 3 cut(s) 319, 364, 615
AlwNI CAGNNNCTG 1 cut(s) 483
Ama87I CYCGRG 1 cut(s) 425
Aor13HI TCCGGA 1 cut(s) 507
AoxI GGCC 6 cut(s) 123, 436, 750, 1077, 1121, 2194
ApaI GGGCCC 1 cut(s) 2198
ApeKI GCWGC 7 cut(s) 139, 145, 148, 520, 771, 919, 955
ApoI RAATTY 4 cut(s) 503, 599, 1660, 2137
AsiGI ACCGGT 2 cut(s) 690, 2104
AspLEI GCGC 2 cut(s) 355, 1144
AspS9I GGNCC 8 cut(s) 124, 661, 914, 1122, 2050, 2071, 2194, 2195
AsuC2I CCSGG 4 cut(s) 161, 179, 298, 590
AsuII TTCGAA 1 cut(s) 216
AvaI CYCGRG 1 cut(s) 425
AvaII GGWCC 4 cut(s) 661, 914, 2050, 2071
BaeGI GKGCMC 2 cut(s) 642, 2198
BalI TGGCCA 1 cut(s) 752
BanI GGYRCC 1 cut(s) 352
BanII GRGCYC 4 cut(s) 189, 435, 534, 2198
BauI CACGAG 1 cut(s) 188
BbsI GAAGAC 1 cut(s) 17
Bbv12I GWGCWC 4 cut(s) 189, 349, 435, 534
BbvI GCAGC 7 cut(s) 135, 151, 157, 507, 758, 906, 967
BccI CCATC 6 cut(s) 934, 1555, 1603, 1906, 1989, 2005
BceAI ACGGC 3 cut(s) 418, 784, 1324
BciT130I CCWGG 2 cut(s) 665, 788
BcnI CCSGG 4 cut(s) 161, 179, 298, 590
BcoDI GTCTC 8 cut(s) 113, 220, 739, 1347, 1570, 1621, 2037, 2235
BfaI CTAG 1 cut(s) 1086
BfoI RGCGCY 1 cut(s) 356
BfrI CTTAAG 1 cut(s) 581
BglI GCCNNNNNGGC 1 cut(s) 1120
BglII AGATCT 1 cut(s) 448
Bme1390I CCNGG 6 cut(s) 161, 179, 298, 590, 665, 788
Bme18I GGWCC 4 cut(s) 661, 914, 2050, 2071
BmeT110I CYCGRG 1 cut(s) 425
BmgT120I GGNCC 8 cut(s) 124, 661, 914, 1122, 2050, 2071, 2194, 2195
BmiI GGNNCC 4 cut(s) 354, 512, 915, 2196
BmrFI CCNGG 6 cut(s) 161, 179, 298, 590, 665, 788
BmrI ACTGGG 5 cut(s) 313, 342, 1307, 1391, 1454
BmsI GCATC 2 cut(s) 658, 855
BmuI ACTGGG 5 cut(s) 313, 342, 1307, 1391, 1454
BpiI GAAGAC 1 cut(s) 17
Bpu14I TTCGAA 1 cut(s) 216
BpuEI CTTGAG 1 cut(s) 971
BpuMI CCSGG 4 cut(s) 161, 179, 298, 590
Bsa29I ATCGAT 1 cut(s) 550
BsaAI YACGTR 1 cut(s) 1702
BsaHI GRCGYC 3 cut(s) 117, 353, 891
BsaI GGTCTC 1 cut(s) 739
BsaWI WCCGGW 6 cut(s) 507, 690, 1066, 2047, 2068, 2104
BsaXI ACNNNNNCTCC 4 cut(s) 174, 204, 927, 957
Bsc4I CCNNNNNNNGG 5 cut(s) 208, 303, 1131, 2047, 2213
Bse118I RCCGGY 8 cut(s) 383, 557, 690, 730, 997, 1055, 1264, 2104
Bse3DI GCAATG 3 cut(s) 248, 1151, 2198
BseAI TCCGGA 1 cut(s) 507
BseBI CCWGG 2 cut(s) 665, 788
BseCI ATCGAT 1 cut(s) 550
BseGI GGATG 4 cut(s) 80, 673, 870, 945
BseLI CCNNNNNNNGG 5 cut(s) 208, 303, 1131, 2047, 2213
BseMI GCAATG 3 cut(s) 248, 1151, 2198
BseMII CTCAG 4 cut(s) 306, 602, 1908, 1941
BseRI GAGGAG 8 cut(s) 32, 443, 869, 1296, 1323, 1443, 2136, 2223
BseSI GKGCMC 2 cut(s) 642, 2198
BseXI GCAGC 7 cut(s) 135, 151, 157, 507, 758, 906, 967
Bsh1236I CGCG 1 cut(s) 2228
Bsh1285I CGRYCG 1 cut(s) 178
BshFI GGCC 6 cut(s) 125, 438, 752, 1079, 1123, 2196
BshNI GGYRCC 1 cut(s) 352
BshTI ACCGGT 2 cut(s) 690, 2104
BshVI ATCGAT 1 cut(s) 550
BsiEI CGRYCG 1 cut(s) 178
BsiHKAI GWGCWC 4 cut(s) 189, 349, 435, 534
BsiHKCI CYCGRG 1 cut(s) 425
BslFI GGGAC 4 cut(s) 176, 314, 502, 646
BslI CCNNNNNNNGG 5 cut(s) 208, 303, 1131, 2047, 2213
BsmAI GTCTC 8 cut(s) 113, 220, 739, 1347, 1570, 1621, 2037, 2235
BsmBI CGTCTC 2 cut(s) 1347, 2235
BsmFI GGGAC 4 cut(s) 176, 314, 502, 646
BsnI GGCC 6 cut(s) 125, 438, 752, 1079, 1123, 2196
Bso31I GGTCTC 1 cut(s) 739
BsoBI CYCGRG 1 cut(s) 425
Bsp119I TTCGAA 1 cut(s) 216
Bsp120I GGGCCC 1 cut(s) 2194
Bsp1286I GDGCHC 6 cut(s) 189, 349, 435, 534, 642, 2198
Bsp13I TCCGGA 1 cut(s) 507
Bsp143I GATC 5 cut(s) 311, 369, 448, 607, 703
Bsp19I CCATGG 1 cut(s) 100
BspANI GGCC 6 cut(s) 125, 438, 752, 1079, 1123, 2196
BspCNI CTCAG 4 cut(s) 307, 603, 1909, 1942
BspDI ATCGAT 1 cut(s) 550
BspEI TCCGGA 1 cut(s) 507
BspFNI CGCG 1 cut(s) 2228
BspLI GGNNCC 4 cut(s) 354, 512, 915, 2196
BspPI GGATC 3 cut(s) 319, 364, 615
BspT104I TTCGAA 1 cut(s) 216
BspT107I GGYRCC 1 cut(s) 352
BspTI CTTAAG 1 cut(s) 581
BspTNI GGTCTC 1 cut(s) 739
BsrDI GCAATG 3 cut(s) 248, 1151, 2198
BsrFI RCCGGY 8 cut(s) 383, 557, 690, 730, 997, 1055, 1264, 2104
BssAI RCCGGY 8 cut(s) 383, 557, 690, 730, 997, 1055, 1264, 2104
BssMI GATC 5 cut(s) 311, 369, 448, 607, 703
BssNAI GTATAC 1 cut(s) 1705
BssNI GRCGYC 3 cut(s) 117, 353, 891
BssSI CACGAG 1 cut(s) 188
BssT1I CCWWGG 2 cut(s) 100, 642
Bst1107I GTATAC 1 cut(s) 1705
Bst2BI CACGAG 1 cut(s) 188
Bst2UI CCWGG 2 cut(s) 665, 788
Bst4CI ACNGT 6 cut(s) 379, 493, 637, 883, 1383, 2120
Bst6I CTCTTC 1 cut(s) 39
BstACI GRCGYC 3 cut(s) 117, 353, 891
BstAFI CTTAAG 1 cut(s) 581
BstAPI GCANNNNNTGC 1 cut(s) 577
BstBAI YACGTR 1 cut(s) 1702
BstBI TTCGAA 1 cut(s) 216
BstDEI CTNAG 4 cut(s) 315, 611, 1917, 1950
BstDSI CCRYGG 3 cut(s) 100, 400, 766
BstENI CCTNNNNNAGG 1 cut(s) 1129
BstF5I GGATG 4 cut(s) 80, 673, 870, 945
BstFNI CGCG 1 cut(s) 2228
BstH2I RGCGCY 1 cut(s) 356
BstHHI GCGC 2 cut(s) 355, 1144
BstKTI GATC 5 cut(s) 314, 372, 451, 610, 706
BstMAI GTCTC 8 cut(s) 113, 220, 739, 1347, 1570, 1621, 2037, 2235
BstMBI GATC 5 cut(s) 311, 369, 448, 607, 703
BstMCI CGRYCG 1 cut(s) 178
BstNI CCWGG 2 cut(s) 665, 788
BstNSI RCATGY 2 cut(s) 575, 799
BstSCI CCNGG 6 cut(s) 159, 177, 296, 588, 663, 786
BstSLI GKGCMC 2 cut(s) 642, 2198
BstSNI TACGTA 1 cut(s) 1702
BstUI CGCG 1 cut(s) 2228
BstV1I GCAGC 7 cut(s) 135, 151, 157, 507, 758, 906, 967
BstV2I GAAGAC 1 cut(s) 17
BstX2I RGATCY 3 cut(s) 311, 448, 607
BstYI RGATCY 3 cut(s) 311, 448, 607
BstZ17I GTATAC 1 cut(s) 1705
Bsu15I ATCGAT 1 cut(s) 550
BsuRI GGCC 6 cut(s) 125, 438, 752, 1079, 1123, 2196
BsuTUI ATCGAT 1 cut(s) 550
BtgI CCRYGG 3 cut(s) 100, 400, 766
BtsCI GGATG 4 cut(s) 80, 673, 870, 945
BtsIMutI CAGTG 2 cut(s) 330, 2028
CaiI CAGNNNCTG 1 cut(s) 483
CfoI GCGC 2 cut(s) 355, 1144
Cfr10I RCCGGY 8 cut(s) 383, 557, 690, 730, 997, 1055, 1264, 2104
Cfr13I GGNCC 8 cut(s) 124, 661, 914, 1122, 2050, 2071, 2194, 2195
ClaI ATCGAT 1 cut(s) 550
CseI GACGC 3 cut(s) 125, 1621, 2217
CspAI ACCGGT 2 cut(s) 690, 2104
CviAII CATG 6 cut(s) 101, 572, 796, 1911, 1944, 2151
DdeI CTNAG 4 cut(s) 315, 611, 1917, 1950
DinI GGCGCC 1 cut(s) 354
DpnI GATC 5 cut(s) 313, 371, 450, 609, 705
DpnII GATC 5 cut(s) 311, 369, 448, 607, 703
EaeI YGGCCR 1 cut(s) 750
Eam1104I CTCTTC 1 cut(s) 39
EarI CTCTTC 1 cut(s) 39
EciI GGCGGA 8 cut(s) 984, 1284, 1326, 1335, 1485, 1530, 2025, 2226
Ecl136II GAGCTC 3 cut(s) 187, 433, 532
Eco105I TACGTA 1 cut(s) 1702
Eco130I CCWWGG 2 cut(s) 100, 642
Eco24I GRGCYC 4 cut(s) 189, 435, 534, 2198
Eco31I GGTCTC 1 cut(s) 739
Eco32I GATATC 1 cut(s) 538
Eco47I GGWCC 4 cut(s) 661, 914, 2050, 2071
Eco53kI GAGCTC 3 cut(s) 187, 433, 532
Eco57I CTGAAG 3 cut(s) 536, 890, 1596
Eco88I CYCGRG 1 cut(s) 425
EcoICRI GAGCTC 3 cut(s) 187, 433, 532
EcoNI CCTNNNNNAGG 1 cut(s) 1129
EcoO109I RGGNCCY 4 cut(s) 124, 661, 1122, 2194
EcoRII CCWGG 2 cut(s) 663, 786
EcoRV GATATC 1 cut(s) 538
EcoT14I CCWWGG 2 cut(s) 100, 642
EcoT38I GRGCYC 4 cut(s) 189, 435, 534, 2198
EgeI GGCGCC 1 cut(s) 354
EheI GGCGCC 1 cut(s) 354
ErhI CCWWGG 2 cut(s) 100, 642
Esp3I CGTCTC 2 cut(s) 1347, 2235
FaeI CATG 6 cut(s) 104, 575, 799, 1914, 1947, 2154
FalI AAGNNNNNCTT 2 cut(s) 1142, 1174
FaqI GGGAC 4 cut(s) 176, 314, 502, 646
FatI CATG 6 cut(s) 100, 571, 795, 1910, 1943, 2150
FauI CCCGC 5 cut(s) 576, 1566, 1725, 1896, 2175
FblI GTMKAC 2 cut(s) 198, 1704
FokI GGATG 4 cut(s) 67, 680, 877, 952
FriOI GRGCYC 4 cut(s) 189, 435, 534, 2198
FspBI CTAG 1 cut(s) 1086
GlaI GCGC 2 cut(s) 354, 1143
HaeII RGCGCY 1 cut(s) 356
HaeIII GGCC 6 cut(s) 125, 438, 752, 1079, 1123, 2196
HgaI GACGC 3 cut(s) 125, 1621, 2217
HhaI GCGC 2 cut(s) 355, 1144
Hin1I GRCGYC 3 cut(s) 117, 353, 891
Hin1II CATG 6 cut(s) 104, 575, 799, 1914, 1947, 2154
Hin6I GCGC 2 cut(s) 353, 1142
HinP1I GCGC 2 cut(s) 353, 1142
HindIII AAGCTT 1 cut(s) 255
HinfI GANTC 6 cut(s) 228, 991, 1252, 1919, 1952, 2030
Hpy166II GTNNAC 7 cut(s) 199, 1423, 1465, 1507, 1705, 2053, 2074
Hpy188I TCNGA 7 cut(s) 233, 280, 311, 316, 374, 612, 822
Hpy188III TCNNGA 5 cut(s) 190, 508, 721, 1916, 1949
Hpy8I GTNNAC 7 cut(s) 199, 1423, 1465, 1507, 1705, 2053, 2074
Hpy99I CGWCG 3 cut(s) 119, 383, 893
HpyCH4III ACNGT 6 cut(s) 379, 493, 637, 883, 1383, 2120
HpyCH4IV ACGT 3 cut(s) 891, 1010, 1701
HpyCH4V TGCA 5 cut(s) 253, 324, 1008, 1179, 1875
HpyF3I CTNAG 4 cut(s) 315, 611, 1917, 1950
HpySE526I ACGT 3 cut(s) 891, 1010, 1701
Hsp92I GRCGYC 3 cut(s) 117, 353, 891
Hsp92II CATG 6 cut(s) 104, 575, 799, 1914, 1947, 2154
HspAI GCGC 2 cut(s) 353, 1142
KasI GGCGCC 1 cut(s) 352
Kpn2I TCCGGA 1 cut(s) 507
KroI GCCGGC 2 cut(s) 383, 997
KroNI GCCGGC 2 cut(s) 385, 999
Kzo9I GATC 5 cut(s) 311, 369, 448, 607, 703
LmnI GCTCC 7 cut(s) 352, 430, 510, 591, 592, 646, 1699
Lsp1109I GCAGC 7 cut(s) 135, 151, 157, 507, 758, 906, 967
LweI GCATC 2 cut(s) 658, 855
MaeI CTAG 1 cut(s) 1086
MaeII ACGT 3 cut(s) 891, 1010, 1701
MaeIII GTNAC 3 cut(s) 542, 1249, 1383
MalI GATC 5 cut(s) 313, 371, 450, 609, 705
MboI GATC 5 cut(s) 311, 369, 448, 607, 703
MboII GAAGA 8 cut(s) 16, 19, 22, 26, 29, 49, 883, 1042
MfeI CAATTG 1 cut(s) 930
MflI RGATCY 3 cut(s) 311, 448, 607
MhlI GDGCHC 6 cut(s) 189, 349, 435, 534, 642, 2198
MlsI TGGCCA 1 cut(s) 752
MluI ACGCGT 1 cut(s) 2226
MluNI TGGCCA 1 cut(s) 752
Mly113I GGCGCC 1 cut(s) 353
MlyI GAGTC 5 cut(s) 222, 1246, 1928, 1961, 2039
MmeI TCCRAC 3 cut(s) 289, 498, 1002
Mox20I TGGCCA 1 cut(s) 752
MroI TCCGGA 1 cut(s) 507
MroNI GCCGGC 2 cut(s) 383, 997
MscI TGGCCA 1 cut(s) 752
MseI TTAA 1 cut(s) 582
MslI CAYNNNNRTG 3 cut(s) 335, 1909, 1942
Msp20I TGGCCA 1 cut(s) 752
MspA1I CMGCKG 3 cut(s) 142, 148, 919
MspCI CTTAAG 1 cut(s) 581
MspR9I CCNGG 6 cut(s) 161, 179, 298, 590, 665, 788
MunI CAATTG 1 cut(s) 930
MvaI CCWGG 2 cut(s) 665, 788
MvnI CGCG 1 cut(s) 2228
NaeI GCCGGC 2 cut(s) 385, 999
NarI GGCGCC 1 cut(s) 353
NciI CCSGG 4 cut(s) 161, 179, 298, 590
NcoI CCATGG 1 cut(s) 100
NdeII GATC 5 cut(s) 311, 369, 448, 607, 703
NgoMIV GCCGGC 2 cut(s) 383, 997
NlaIII CATG 6 cut(s) 104, 575, 799, 1914, 1947, 2154
NlaIV GGNNCC 4 cut(s) 354, 512, 915, 2196
NmeAIII GCCGAG 3 cut(s) 145, 414, 1041
NmuCI GTSAC 2 cut(s) 1249, 1383
NspI RCATGY 2 cut(s) 575, 799
NspV TTCGAA 1 cut(s) 216
OliI CACNNNNGTG 1 cut(s) 335
PciI ACATGT 1 cut(s) 795
PcsI WCGNNNNNNNCGW 1 cut(s) 171
PdiI GCCGGC 2 cut(s) 385, 999
PfeI GAWTC 1 cut(s) 991
PflFI GACNNNGTC 1 cut(s) 305
PflMI CCANNNNNTGG 1 cut(s) 2213
PfoI TCCNGGA 1 cut(s) 588
PinAI ACCGGT 2 cut(s) 690, 2104
PleI GAGTC 5 cut(s) 222, 1246, 1927, 1960, 2038
PluTI GGCGCC 1 cut(s) 356
PpsI GAGTC 5 cut(s) 222, 1246, 1927, 1960, 2038
Ppu21I YACGTR 1 cut(s) 1702
PpuMI RGGWCCY 1 cut(s) 661
PscI ACATGT 1 cut(s) 795
PsiI TTATAA 1 cut(s) 1044
Psp124BI GAGCTC 3 cut(s) 189, 435, 534
Psp5II RGGWCCY 1 cut(s) 661
Psp6I CCWGG 2 cut(s) 663, 786
PspGI CCWGG 2 cut(s) 663, 786
PspN4I GGNNCC 4 cut(s) 354, 512, 915, 2196
PspOMI GGGCCC 1 cut(s) 2194
PspPI GGNCC 8 cut(s) 124, 661, 914, 1122, 2050, 2071, 2194, 2195
PspPPI RGGWCCY 1 cut(s) 661
PsrI GAACNNNNNNTAC 2 cut(s) 1019, 1051
PstNI CAGNNNCTG 1 cut(s) 483
PsuI RGATCY 3 cut(s) 311, 448, 607
PsyI GACNNNGTC 1 cut(s) 305
PvuII CAGCTG 1 cut(s) 148
RseI CAYNNNNRTG 3 cut(s) 335, 1909, 1942
SacI GAGCTC 3 cut(s) 189, 435, 534
SaqAI TTAA 1 cut(s) 582
Sau3AI GATC 5 cut(s) 311, 369, 448, 607, 703
Sau96I GGNCC 8 cut(s) 124, 661, 914, 1122, 2050, 2071, 2194, 2195
SchI GAGTC 5 cut(s) 222, 1246, 1928, 1961, 2039
ScrFI CCNGG 6 cut(s) 161, 179, 298, 590, 665, 788
SduI GDGCHC 6 cut(s) 189, 349, 435, 534, 642, 2198
SfaNI GCATC 2 cut(s) 658, 855
SfoI GGCGCC 1 cut(s) 354
SfuI TTCGAA 1 cut(s) 216
SgrAI CRCCGGYG 1 cut(s) 1055
SinI GGWCC 4 cut(s) 661, 914, 2050, 2071
SmiMI CAYNNNNRTG 3 cut(s) 335, 1909, 1942
SmlI CTYRAG 2 cut(s) 581, 950
SmoI CTYRAG 2 cut(s) 581, 950
SnaBI TACGTA 1 cut(s) 1702
SspDI GGCGCC 1 cut(s) 352
SspMI CTAG 1 cut(s) 1086
SstI GAGCTC 3 cut(s) 189, 435, 534
StyD4I CCNGG 6 cut(s) 159, 177, 296, 588, 663, 786
StyI CCWWGG 2 cut(s) 100, 642
TaaI ACNGT 6 cut(s) 379, 493, 637, 883, 1383, 2120
TaiI ACGT 3 cut(s) 894, 1013, 1704
TfiI GAWTC 1 cut(s) 991
Tru1I TTAA 1 cut(s) 582
Tru9I TTAA 1 cut(s) 582
TscAI CASTG 2 cut(s) 337, 2028
TseFI GTSAC 2 cut(s) 1249, 1383
TseI GCWGC 7 cut(s) 139, 145, 148, 520, 771, 919, 955
Tsp45I GTSAC 2 cut(s) 1249, 1383
TspDTI ATGAA 4 cut(s) 17, 667, 839, 2211
TspGWI ACGGA 2 cut(s) 727, 1625
TspRI CASTG 2 cut(s) 337, 2028
Tth111I GACNNNGTC 1 cut(s) 305
Van91I CCANNNNNTGG 1 cut(s) 2213
Vha464I CTTAAG 1 cut(s) 581
VpaK11BI GGWCC 4 cut(s) 661, 914, 2050, 2071
XagI CCTNNNNNAGG 1 cut(s) 1129
XapI RAATTY 4 cut(s) 503, 599, 1660, 2137
XceI RCATGY 2 cut(s) 575, 799
XmiI GTMKAC 2 cut(s) 198, 1704
XspI CTAG 1 cut(s) 1086
ZraI GACGTC 1 cut(s) 892
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.