Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0001221

Physical Location & Seq

Genomic Coordinates Forward (+)

949276 .. 951174

Gene Structure 1899 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0010800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1335 bp

ATGGGATACCGGAAAGACCGCGTGAGATTCAATGTTGGAGGCAGAATCTTTGAAACGACCGCCACCACTCTCGCCAATGCCGGCCGGAATTCCCTGTTCGGCGCCATGTTCGACGACAGCTGGAATCTCCAACAACTCGATAACAACAATTCCAACGACTACTTCATCGACCGCAACCCCGATTGCTTTGCGGTCCTCCTCGATCTTCTACGAACTAATGAACTCTGCGTCCCTACAAATATGTCCGAAAAGCTCCTCTATAGAGAGGCCGTGTATTACGGGCTCCTGGACCACGTCCGGTCCGCCAAATGGGGACCGTTCGATGGCAACAGGCTCTGGCTTTCGAGGACCGTCGCCGGGCAAGCTCCCGGCGACGGGACCGCCATCCGGGCCGGCCCGGATGGCGGTTGCTGTGTGGCTCATGGTTGTATGGTGCATGTGTACGATTGGATGCTGGACGAGCACCCTACTATTAATCTTGACTATCAAAGAGTCAATGACGTTGGATGGCTTGATTCTGAGAACATAGTGGTGAGTGTTTGTGAGAGGTTGGGCCGCGGCGACGGCGGAATGGGGCTGTTCAGCTCGTCCAGCGGTGAACTAAGGGACAAGTTTCAGGTGAGTCACGAGAATCAAGTGAAGAGCTTCACTGCTGGAGCCTTGAGTTTCAGCTCAGATTACAAGATATTTTCCAGCTGTAAAGGGAGGAGCAACGAGTATGGGATTGGAGTTTGGGACCAAATCACTGGGAAGCAGACCGATTTCTTCTACGAGCCGCTGGGGTGGTCTCTTGGTGATGCAGACAAGCTGCAATGGTTGAATGGGAGTAACTGTTTGCTGGTGGCGACTTTGTTTCCAAGGAAGGACAACTGTTACATTAGTTTGTTGGATTTTCGGGAGAAGAAGATGGTGTGGTCTTGGTCCGATATGGGAGCTCCGATAATGGTGGATGAGAAGAGAGTTCGGGATGCGATAGCGATGGAAGAGAGTAACTCGATCTGTGTTGTGAATGAATATGAGGATTTGGGGTTTATTGATATAAGAAACTCTGGGGGAAGTGTTAGGTGGAGCTCAAGGAGTAAGCTTATGAAGGGAAAAATGCCTGATGAGCCTTGCTACCCTAAACTTGCATTACACGAAGGGCAGCTGTTTTCGTCCATGAATGATTCCATTTCAGTGTTCTGTGGACCAGAATGGGTTTTGACATCAAGGCTTAGGCGAAGCCATGGAGGTTCGATTTGTGATTTCTCAATTGGTGGGGATCGGCTTTTCGCTCTTCATAGCGAGGAGAATGTGTTTGATATATGGGAGACTCCACCTGCGCCGATTATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005798 GO:0006810 GO:0006886 GO:0006888 GO:0006890 GO:0006891 GO:0008104 GO:0008150 GO:0012505 GO:0012506 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0030117 GO:0030120 GO:0030126 GO:0030135 GO:0030137 GO:0030659 GO:0030660 GO:0030662 GO:0030663 GO:0031090 GO:0031410 GO:0031982 GO:0032991 GO:0033036 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044433 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0048193 GO:0048475 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0097708 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Coatomer_WDAD WD40

Protein Analysis

444

Amino Acids

49.85

Weight (kDa)

5.11

Isoelectric Point (pI)

36.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BTB_2	PF02214	8 - 98	1.6e-16	BTB/POZ domain
Beta_prop_At2g24240	PF25279	120 - 438	2.4e-179	At2g24240-like, C-terminal beta propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001221)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G52360 AT1G52360 AT1G52360 AT1G52360 AT1G79990 AT1G79990 AT3G15980 AT3G15980 AT3G15980 AT3G15980 AT3G15980 AT3G15980 AT3G15980
fragaria_vesca	FvH4_1g05170 FvH4_1g05170 FvH4_1g05170 FvH4_1g05170 FvH4_6g31010 FvH4_6g31010 FvH4_6g31010 FvH4_6g31010 FvH4_6g31010 FvH4_6g31010 FvH4_6g31010
malus_domestica	MD09G1214300.v1.1 MD15G1188300.v1.1 MD17G1196600.v1.1
prunus_persica	Prupe.3G072300_v2.0.a1 Prupe.3G072300_v2.0.a1 Prupe.3G072300_v2.0.a1 Prupe.7G228200_v2.0.a1 Prupe.7G228200_v2.0.a1 Prupe.7G228200_v2.0.a1
pyrus_communis	pycom02g04220 pycom09g13110 pycom15g16880 pycom17g20170
rosa_chinensis	RchiOBHm_Chr2g0090881 RchiOBHm_Chr2g0137661
rosa_laevigata	RLG00000016153 RLG00000019667
rosa_multiflora	Rmu_sc0000765.1_g000033 Rmu_sc0000792.1_g000012
rosa_roxburghii	Rroxscaffold_2G00106960 Rroxscaffold_2G00150770
rosa_rugosa	Rorug02G0010700 Rorug02G0010800 Rorug02G0343900
rosa_samantha	Rh2AG057000 Rh2AG391700 Rh2BG399200 Rh2CG378600 Rh2DG056400 Rh2DG414300
rosa_wichuraiana	Rw2G005240 Rw2G032090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1327
Acc36I	ACCTGC	1 cut(s)	1327
AccB1I	GGYRCC	1 cut(s)	101
AccII	CGCG	2 cut(s)	21, 558
AclWI	GGATC	1 cut(s)	1269
AcoI	YGGCCR	1 cut(s)	82
AcsI	RAATTY	1 cut(s)	88
AcyI	GRCGYC	1 cut(s)	102
AfaI	GTAC	1 cut(s)	443
AfiI	CCNNNNNNNGG	7 cut(s)	309, 323, 357, 374, 375, 387, 404
AgsI	TTSAA	3 cut(s)	31, 53, 820
AjiI	CACGTC	1 cut(s)	295
AjnI	CCWGG	1 cut(s)	285
AjuI	GAANNNNNNNTTGG	2 cut(s)	146, 178
AloI	GAACNNNNNNTCC	2 cut(s)	213, 245
Alw21I	GWGCWC	3 cut(s)	465, 937, 1073
Alw26I	GTCTC	2 cut(s)	792, 1304
AlwI	GGATC	1 cut(s)	1269
AlwNI	CAGNNNCTG	1 cut(s)	336
AoxI	GGCC	5 cut(s)	82, 267, 390, 394, 553
ApeKI	GCWGC	2 cut(s)	808, 1144
ApoI	RAATTY	1 cut(s)	88
AseI	ATTAAT	1 cut(s)	474
Asp700I	GAANNNNTTC	1 cut(s)	644
AspLEI	GCGC	2 cut(s)	104, 1324
AsuC2I	CCSGG	4 cut(s)	358, 369, 389, 398
AsuHPI	GGTGA	4 cut(s)	544, 608, 631, 806
AvaII	GGWCC	9 cut(s)	193, 289, 300, 314, 348, 378, 736, 921, 1187
BanI	GGYRCC	1 cut(s)	101
BanII	GRGCYC	3 cut(s)	285, 937, 1073
BauI	CACGAG	1 cut(s)	626
Bbv12I	GWGCWC	3 cut(s)	465, 937, 1073
BbvI	GCAGC	2 cut(s)	795, 1156
BccI	CCATC	6 cut(s)	317, 392, 395, 501, 901, 973
BceAI	ACGGC	2 cut(s)	254, 580
BcgI	CGANNNNNNTGC	2 cut(s)	170, 204
BciT130I	CCWGG	1 cut(s)	287
BcnI	CCSGG	4 cut(s)	358, 369, 389, 398
BcoDI	GTCTC	2 cut(s)	792, 1304
BfmI	CTRYAG	1 cut(s)	259
BfoI	RGCGCY	1 cut(s)	105
BfuAI	ACCTGC	1 cut(s)	1327
BglI	GCCNNNNNGGC	2 cut(s)	389, 402
BisI	GCNGC	5 cut(s)	556, 559, 776, 809, 1145
BlsI	GCNGC	5 cut(s)	557, 560, 777, 810, 1146
Bme1390I	CCNGG	5 cut(s)	287, 358, 369, 389, 398
Bme18I	GGWCC	9 cut(s)	193, 289, 300, 314, 348, 378, 736, 921, 1187
BmgBI	CACGTC	1 cut(s)	295
BmiI	GGNNCC	6 cut(s)	103, 284, 315, 379, 658, 737
BmrFI	CCNGG	5 cut(s)	287, 358, 369, 389, 398
BmrI	ACTGGG	1 cut(s)	756
BmsI	GCATC	3 cut(s)	441, 787, 958
BmuI	ACTGGG	1 cut(s)	756
BplI	GAGNNNNNCTC	2 cut(s)	977, 1009
BpmI	CTGGAG	1 cut(s)	675
Bpu10I	CCTNAGC	1 cut(s)	1214
BpuEI	CTTGAG	2 cut(s)	682, 1057
BpuMI	CCSGG	4 cut(s)	358, 369, 389, 398
BsaHI	GRCGYC	1 cut(s)	102
BsaI	GGTCTC	1 cut(s)	792
BsaJI	CCNNGG	3 cut(s)	556, 857, 1225
BsaWI	WCCGGW	2 cut(s)	9, 297
BsaXI	ACNNNNNCTCC	4 cut(s)	817, 847, 1280, 1310
Bsc4I	CCNNNNNNNGG	7 cut(s)	309, 323, 357, 374, 375, 387, 404
Bse118I	RCCGGY	2 cut(s)	80, 392
Bse1I	ACTGG	1 cut(s)	751
Bse3DI	GCAATG	1 cut(s)	818
BseBI	CCWGG	1 cut(s)	287
BseDI	CCNNGG	3 cut(s)	556, 857, 1225
BseGI	GGATG	6 cut(s)	384, 406, 456, 512, 955, 973
BseLI	CCNNNNNNNGG	7 cut(s)	309, 323, 357, 374, 375, 387, 404
BseMI	GCAATG	1 cut(s)	818
BseMII	CTCAG	2 cut(s)	510, 687
BseNI	ACTGG	1 cut(s)	751
BseRI	GAGGAG	4 cut(s)	188, 245, 721, 1301
BseX3I	CGGCCG	1 cut(s)	82
BseXI	GCAGC	2 cut(s)	795, 1156
BseYI	CCCAGC	1 cut(s)	778
Bsh1236I	CGCG	2 cut(s)	21, 558
Bsh1285I	CGRYCG	3 cut(s)	60, 85, 172
BshFI	GGCC	5 cut(s)	84, 269, 392, 396, 555
BshNI	GGYRCC	1 cut(s)	101
BsiEI	CGRYCG	3 cut(s)	60, 85, 172
BsiHKAI	GWGCWC	3 cut(s)	465, 937, 1073
BsiSI	CCGG	9 cut(s)	10, 81, 85, 298, 357, 369, 388, 393, 398
BslFI	GGGAC	5 cut(s)	215, 327, 391, 620, 749
BslI	CCNNNNNNNGG	7 cut(s)	309, 323, 357, 374, 375, 387, 404
BsmAI	GTCTC	2 cut(s)	792, 1304
BsmFI	GGGAC	5 cut(s)	215, 327, 391, 620, 749
BsnI	GGCC	5 cut(s)	84, 269, 392, 396, 555
Bso31I	GGTCTC	1 cut(s)	792
Bsp1286I	GDGCHC	4 cut(s)	285, 465, 937, 1073
Bsp143I	GATC	3 cut(s)	202, 996, 1261
Bsp19I	CCATGG	1 cut(s)	1225
BspANI	GGCC	5 cut(s)	84, 269, 392, 396, 555
BspCNI	CTCAG	2 cut(s)	511, 686
BspFNI	CGCG	2 cut(s)	21, 558
BspLI	GGNNCC	6 cut(s)	103, 284, 315, 379, 658, 737
BspMI	ACCTGC	1 cut(s)	1327
BspPI	GGATC	1 cut(s)	1269
BspQI	GCTCTTC	2 cut(s)	635, 1281
BspT107I	GGYRCC	1 cut(s)	101
BspTNI	GGTCTC	1 cut(s)	792
BsrDI	GCAATG	1 cut(s)	818
BsrFI	RCCGGY	2 cut(s)	80, 392
BsrI	ACTGG	1 cut(s)	751
BssAI	RCCGGY	2 cut(s)	80, 392
BssECI	CCNNGG	3 cut(s)	556, 857, 1225
BssMI	GATC	3 cut(s)	202, 996, 1261
BssNI	GRCGYC	1 cut(s)	102
BssSI	CACGAG	1 cut(s)	626
BssT1I	CCWWGG	2 cut(s)	857, 1225
Bst2BI	CACGAG	1 cut(s)	626
Bst2UI	CCWGG	1 cut(s)	287
Bst4CI	ACNGT	4 cut(s)	318, 352, 833, 872
Bst6I	CTCTTC	4 cut(s)	635, 950, 978, 1281
BstACI	GRCGYC	1 cut(s)	102
BstC8I	GCNNGC	3 cut(s)	82, 363, 394
BstDEI	CTNAG	4 cut(s)	519, 602, 673, 1214
BstDSI	CCRYGG	2 cut(s)	556, 1225
BstF5I	GGATG	6 cut(s)	384, 406, 456, 512, 955, 973
BstFNI	CGCG	2 cut(s)	21, 558
BstH2I	RGCGCY	1 cut(s)	105
BstHHI	GCGC	2 cut(s)	104, 1324
BstKTI	GATC	3 cut(s)	205, 999, 1264
BstMAI	GTCTC	2 cut(s)	792, 1304
BstMBI	GATC	3 cut(s)	202, 996, 1261
BstMCI	CGRYCG	3 cut(s)	60, 85, 172
BstMWI	GCNNNNNNNGC	7 cut(s)	362, 389, 402, 460, 564, 591, 1108
BstNI	CCWGG	1 cut(s)	287
BstNSI	RCATGY	1 cut(s)	440
BstSCI	CCNGG	5 cut(s)	285, 356, 367, 387, 396
BstSFI	CTRYAG	1 cut(s)	259
BstUI	CGCG	2 cut(s)	21, 558
BstV1I	GCAGC	2 cut(s)	795, 1156
BstXI	CCANNNNNNTGG	1 cut(s)	746
BstZI	CGGCCG	1 cut(s)	82
BsuRI	GGCC	5 cut(s)	84, 269, 392, 396, 555
BtgI	CCRYGG	2 cut(s)	556, 1225
BtgZI	GCGATG	1 cut(s)	992
BtrI	CACGTC	1 cut(s)	295
BtsCI	GGATG	6 cut(s)	384, 406, 456, 512, 955, 973
BtsI	GCAGTG	1 cut(s)	648
BtsIMutI	CAGTG	3 cut(s)	648, 744, 1182
BveI	ACCTGC	1 cut(s)	1327
Cac8I	GCNNGC	3 cut(s)	82, 363, 394
CaiI	CAGNNNCTG	1 cut(s)	336
CfoI	GCGC	2 cut(s)	104, 1324
Cfr10I	RCCGGY	2 cut(s)	80, 392
Cfr42I	CCGCGG	1 cut(s)	559
CpoI	CGGWCCG	1 cut(s)	300
CseI	GACGC	1 cut(s)	217
Csp6I	GTAC	1 cut(s)	442
CspI	CGGWCCG	1 cut(s)	300
CviAII	CATG	5 cut(s)	106, 422, 437, 1159, 1226
CviQI	GTAC	1 cut(s)	442
DdeI	CTNAG	4 cut(s)	519, 602, 673, 1214
DinI	GGCGCC	1 cut(s)	103
DpnI	GATC	3 cut(s)	204, 998, 1263
DpnII	GATC	3 cut(s)	202, 996, 1261
EaeI	YGGCCR	1 cut(s)	82
EagI	CGGCCG	1 cut(s)	82
Eam1104I	CTCTTC	4 cut(s)	635, 950, 978, 1281
EarI	CTCTTC	4 cut(s)	635, 950, 978, 1281
EciI	GGCGGA	2 cut(s)	292, 582
Ecl136II	GAGCTC	2 cut(s)	935, 1071
EclXI	CGGCCG	1 cut(s)	82
Eco130I	CCWWGG	2 cut(s)	857, 1225
Eco24I	GRGCYC	3 cut(s)	285, 937, 1073
Eco31I	GGTCTC	1 cut(s)	792
Eco47I	GGWCC	9 cut(s)	193, 289, 300, 314, 348, 378, 736, 921, 1187
Eco52I	CGGCCG	1 cut(s)	82
Eco53kI	GAGCTC	2 cut(s)	935, 1071
EcoICRI	GAGCTC	2 cut(s)	935, 1071
EcoRI	GAATTC	1 cut(s)	88
EcoRII	CCWGG	1 cut(s)	285
EcoT14I	CCWWGG	2 cut(s)	857, 1225
EcoT38I	GRGCYC	3 cut(s)	285, 937, 1073
EgeI	GGCGCC	1 cut(s)	103
EheI	GGCGCC	1 cut(s)	103
ErhI	CCWWGG	2 cut(s)	857, 1225
FaeI	CATG	5 cut(s)	109, 425, 440, 1162, 1229
FaqI	GGGAC	5 cut(s)	215, 327, 391, 620, 749
FatI	CATG	5 cut(s)	105, 421, 436, 1158, 1225
Fnu4HI	GCNGC	5 cut(s)	556, 559, 776, 809, 1145
FokI	GGATG	6 cut(s)	371, 413, 463, 519, 962, 980
FriOI	GRGCYC	3 cut(s)	285, 937, 1073
FseI	GGCCGGCC	1 cut(s)	396
Fsp4HI	GCNGC	5 cut(s)	556, 559, 776, 809, 1145
GlaI	GCGC	2 cut(s)	103, 1323
GluI	GCNGC	5 cut(s)	556, 559, 776, 809, 1145
GsaI	CCCAGC	1 cut(s)	782
GsuI	CTGGAG	1 cut(s)	675
HaeII	RGCGCY	1 cut(s)	105
HaeIII	GGCC	5 cut(s)	84, 269, 392, 396, 555
HapII	CCGG	9 cut(s)	10, 81, 85, 298, 357, 369, 388, 393, 398
HgaI	GACGC	1 cut(s)	217
HhaI	GCGC	2 cut(s)	104, 1324
Hin1I	GRCGYC	1 cut(s)	102
Hin1II	CATG	5 cut(s)	109, 425, 440, 1162, 1229
Hin6I	GCGC	2 cut(s)	102, 1322
HinP1I	GCGC	2 cut(s)	102, 1322
HindIII	AAGCTT	1 cut(s)	1082
HinfI	GANTC	9 cut(s)	27, 45, 124, 492, 515, 622, 631, 1166, 1312
HpaII	CCGG	9 cut(s)	10, 81, 85, 298, 357, 369, 388, 393, 398
HphI	GGTGA	4 cut(s)	544, 608, 631, 806
Hpy166II	GTNNAC	3 cut(s)	442, 599, 1187
Hpy188I	TCNGA	5 cut(s)	247, 520, 676, 925, 939
Hpy188III	TCNNGA	4 cut(s)	479, 626, 896, 965
Hpy8I	GTNNAC	3 cut(s)	442, 599, 1187
Hpy99I	CGWCG	4 cut(s)	116, 356, 377, 566
HpyAV	CCTTC	3 cut(s)	856, 1084, 1133
HpyCH4III	ACNGT	4 cut(s)	318, 352, 833, 872
HpyCH4IV	ACGT	2 cut(s)	294, 501
HpyCH4V	TGCA	4 cut(s)	436, 800, 811, 1130
HpyF10VI	GCNNNNNNNGC	7 cut(s)	362, 389, 402, 460, 564, 591, 1108
HpyF3I	CTNAG	4 cut(s)	519, 602, 673, 1214
HpySE526I	ACGT	2 cut(s)	294, 501
Hsp92I	GRCGYC	1 cut(s)	102
Hsp92II	CATG	5 cut(s)	109, 425, 440, 1162, 1229
HspAI	GCGC	2 cut(s)	102, 1322
KasI	GGCGCC	1 cut(s)	101
KroI	GCCGGC	2 cut(s)	80, 392
KroNI	GCCGGC	2 cut(s)	82, 394
KspI	CCGCGG	1 cut(s)	559
Kzo9I	GATC	3 cut(s)	202, 996, 1261
LguI	GCTCTTC	2 cut(s)	635, 1281
LmnI	GCTCC	8 cut(s)	258, 288, 370, 656, 708, 932, 940, 1068
Lsp1109I	GCAGC	2 cut(s)	795, 1156
LweI	GCATC	3 cut(s)	441, 787, 958
MaeII	ACGT	2 cut(s)	294, 501
MaeIII	GTNAC	4 cut(s)	623, 827, 872, 989
MalI	GATC	3 cut(s)	204, 998, 1263
MboI	GATC	3 cut(s)	202, 996, 1261
MboII	GAAGA	8 cut(s)	197, 652, 757, 913, 916, 967, 995, 1268
MfeI	CAATTG	1 cut(s)	1251
MhlI	GDGCHC	4 cut(s)	285, 465, 937, 1073
MluCI	AATT	3 cut(s)	88, 148, 1251
Mly113I	GGCGCC	1 cut(s)	102
MlyI	GAGTC	3 cut(s)	501, 631, 1306
MmeI	TCCRAC	5 cut(s)	16, 154, 177, 484, 867
MroNI	GCCGGC	2 cut(s)	80, 392
MroXI	GAANNNNTTC	1 cut(s)	644
MseI	TTAA	1 cut(s)	474
MslI	CAYNNNNRTG	2 cut(s)	530, 1175
MspA1I	CMGCKG	6 cut(s)	120, 558, 594, 696, 778, 1147
MspI	CCGG	9 cut(s)	10, 81, 85, 298, 357, 369, 388, 393, 398
MspR9I	CCNGG	5 cut(s)	287, 358, 369, 389, 398
MunI	CAATTG	1 cut(s)	1251
MvaI	CCWGG	1 cut(s)	287
MvnI	CGCG	2 cut(s)	21, 558
MwoI	GCNNNNNNNGC	7 cut(s)	362, 389, 402, 460, 564, 591, 1108
NaeI	GCCGGC	2 cut(s)	82, 394
NarI	GGCGCC	1 cut(s)	102
NciI	CCSGG	4 cut(s)	358, 369, 389, 398
NcoI	CCATGG	1 cut(s)	1225
NdeII	GATC	3 cut(s)	202, 996, 1261
NgoMIV	GCCGGC	2 cut(s)	80, 392
NlaIII	CATG	5 cut(s)	109, 425, 440, 1162, 1229
NlaIV	GGNNCC	6 cut(s)	103, 284, 315, 379, 658, 737
NmuCI	GTSAC	1 cut(s)	623
NspI	RCATGY	1 cut(s)	440
PaqCI	CACCTGC	1 cut(s)	1327
PciSI	GCTCTTC	2 cut(s)	635, 1281
PdiI	GCCGGC	2 cut(s)	82, 394
PdmI	GAANNNNTTC	1 cut(s)	644
PfeI	GAWTC	6 cut(s)	27, 45, 124, 515, 631, 1166
PflFI	GACNNNGTC	1 cut(s)	293
PfoI	TCCNGGA	1 cut(s)	285
PkrI	GCNGC	5 cut(s)	557, 560, 777, 810, 1146
PleI	GAGTC	3 cut(s)	500, 630, 1306
PluTI	GGCGCC	1 cut(s)	105
PpsI	GAGTC	3 cut(s)	500, 630, 1306
PshBI	ATTAAT	1 cut(s)	474
Psp124BI	GAGCTC	2 cut(s)	937, 1073
Psp6I	CCWGG	1 cut(s)	285
PspFI	CCCAGC	1 cut(s)	778
PspGI	CCWGG	1 cut(s)	285
PspN4I	GGNNCC	6 cut(s)	103, 284, 315, 379, 658, 737
PstNI	CAGNNNCTG	1 cut(s)	336
PsyI	GACNNNGTC	1 cut(s)	293
PvuII	CAGCTG	3 cut(s)	120, 696, 1147
RigI	GGCCGGCC	1 cut(s)	396
RsaI	GTAC	1 cut(s)	443
RsaNI	GTAC	1 cut(s)	442
RseI	CAYNNNNRTG	2 cut(s)	530, 1175
Rsr2I	CGGWCCG	1 cut(s)	300
RsrII	CGGWCCG	1 cut(s)	300
SacI	GAGCTC	2 cut(s)	937, 1073
SacII	CCGCGG	1 cut(s)	559
SapI	GCTCTTC	2 cut(s)	635, 1281
SaqAI	TTAA	1 cut(s)	474
SatI	GCNGC	5 cut(s)	556, 559, 776, 809, 1145
Sau3AI	GATC	3 cut(s)	202, 996, 1261
SchI	GAGTC	3 cut(s)	501, 631, 1306
ScrFI	CCNGG	5 cut(s)	287, 358, 369, 389, 398
SduI	GDGCHC	4 cut(s)	285, 465, 937, 1073
SfaNI	GCATC	3 cut(s)	441, 787, 958
SfcI	CTRYAG	1 cut(s)	259
SfoI	GGCGCC	1 cut(s)	103
Sfr303I	CCGCGG	1 cut(s)	559
SgrBI	CCGCGG	1 cut(s)	559
SinI	GGWCC	9 cut(s)	193, 289, 300, 314, 348, 378, 736, 921, 1187
SmiMI	CAYNNNNRTG	2 cut(s)	530, 1175
SmlI	CTYRAG	2 cut(s)	661, 1072
SmoI	CTYRAG	2 cut(s)	661, 1072
Sse9I	AATT	3 cut(s)	88, 148, 1251
SspDI	GGCGCC	1 cut(s)	101
SstI	GAGCTC	2 cut(s)	937, 1073
StyD4I	CCNGG	5 cut(s)	285, 356, 367, 387, 396
StyI	CCWWGG	2 cut(s)	857, 1225
TaaI	ACNGT	4 cut(s)	318, 352, 833, 872
TaiI	ACGT	2 cut(s)	297, 504
TaqI	TCGA	8 cut(s)	111, 138, 168, 201, 321, 344, 995, 1235
TaqII	GACCGA	1 cut(s)	773
TasI	AATT	3 cut(s)	88, 148, 1251
TauI	GCSGC	3 cut(s)	558, 561, 778
TfiI	GAWTC	6 cut(s)	27, 45, 124, 515, 631, 1166
Tru1I	TTAA	1 cut(s)	474
Tru9I	TTAA	1 cut(s)	474
TscAI	CASTG	3 cut(s)	655, 751, 1182
TseFI	GTSAC	1 cut(s)	623
TseI	GCWGC	2 cut(s)	808, 1144
Tsp45I	GTSAC	1 cut(s)	623
TspDTI	ATGAA	6 cut(s)	154, 234, 1026, 1103, 1175, 1268
TspRI	CASTG	3 cut(s)	655, 751, 1182
Tth111I	GACNNNGTC	1 cut(s)	293
VpaK11BI	GGWCC	9 cut(s)	193, 289, 300, 314, 348, 378, 736, 921, 1187
VspI	ATTAAT	1 cut(s)	474
XapI	RAATTY	1 cut(s)	88
XceI	RCATGY	1 cut(s)	440
XmnI	GAANNNNTTC	1 cut(s)	644

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.