The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 507, 989 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1862 |
| Acc36I | ACCTGC | 1 cut(s) | 2656 |
| AccI | GTMKAC | 3 cut(s) | 498, 1866, 2218 |
| AccII | CGCG | 3 cut(s) | 67, 90, 1885 |
| AccIII | TCCGGA | 1 cut(s) | 973 |
| AciI | CCGC | 8 cut(s) | 174, 208, 274, 840, 1188, 1680, 2275, 2633 |
| AclI | AACGTT | 2 cut(s) | 1511, 1662 |
| AclWI | GGATC | 6 cut(s) | 321, 331, 344, 1413, 2624, 2835 |
| AcoI | YGGCCR | 2 cut(s) | 1290, 2625 |
| AcsI | RAATTY | 7 cut(s) | 278, 784, 1221, 1439, 1463, 1497, 2192 |
| AcuI | CTGAAG | 3 cut(s) | 2340, 2538, 3039 |
| AdeI | CACNNNGTG | 1 cut(s) | 682 |
| AfaI | GTAC | 8 cut(s) | 368, 652, 1094, 1167, 1385, 1946, 2042, 2543 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1353, 2976 |
| AflIII | ACRYGT | 2 cut(s) | 483, 1075 |
| AjnI | CCWGG | 3 cut(s) | 1515, 1929, 2928 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 1186, 1218, 2297, 2329, 2542, 2574 |
| Alw21I | GWGCWC | 5 cut(s) | 139, 207, 228, 395, 1809 |
| Alw26I | GTCTC | 6 cut(s) | 41, 110, 418, 775, 1750, 2867 |
| AlwI | GGATC | 6 cut(s) | 321, 331, 344, 1413, 2624, 2835 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 119 |
| Ama87I | CYCGRG | 2 cut(s) | 221, 2142 |
| Aor13HI | TCCGGA | 1 cut(s) | 973 |
| AoxI | GGCC | 5 cut(s) | 1083, 1290, 1769, 1937, 2625 |
| ApeKI | GCWGC | 3 cut(s) | 250, 2522, 2612 |
| ApoI | RAATTY | 7 cut(s) | 278, 784, 1221, 1439, 1463, 1497, 2192 |
| AspLEI | GCGC | 3 cut(s) | 67, 69, 109 |
| AspS9I | GGNCC | 5 cut(s) | 4, 1083, 1933, 1938, 2344 |
| AsuHPI | GGTGA | 5 cut(s) | 826, 854, 1919, 1919, 2876 |
| AsuNHI | GCTAGC | 2 cut(s) | 1175, 3028 |
| AvaI | CYCGRG | 2 cut(s) | 221, 2142 |
| AvaII | GGWCC | 3 cut(s) | 4, 1933, 2344 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2525, 2558 |
| BamHI | GGATCC | 1 cut(s) | 336 |
| BanII | GRGCYC | 5 cut(s) | 139, 207, 228, 1809, 2254 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2469, 2501 |
| Bbv12I | GWGCWC | 5 cut(s) | 139, 207, 228, 395, 1809 |
| BbvI | GCAGC | 3 cut(s) | 262, 2534, 2599 |
| BccI | CCATC | 9 cut(s) | 195, 331, 579, 929, 1001, 1265, 1370, 1451, 2524 |
| BceAI | ACGGC | 3 cut(s) | 411, 1277, 1959 |
| BciT130I | CCWGG | 3 cut(s) | 1517, 1931, 2930 |
| BciVI | GTATCC | 3 cut(s) | 2006, 2505, 2652 |
| BcoDI | GTCTC | 6 cut(s) | 41, 110, 418, 775, 1750, 2867 |
| BfaI | CTAG | 3 cut(s) | 1176, 1784, 3029 |
| BfmI | CTRYAG | 6 cut(s) | 957, 1266, 1548, 2175, 2244, 2613 |
| BfuAI | ACCTGC | 1 cut(s) | 2656 |
| BfuI | GTATCC | 3 cut(s) | 2006, 2505, 2652 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 259 |
| BglII | AGATCT | 2 cut(s) | 756, 2821 |
| BisI | GCNGC | 5 cut(s) | 251, 1681, 2276, 2523, 2613 |
| BlpI | GCTNAGC | 1 cut(s) | 1429 |
| BlsI | GCNGC | 5 cut(s) | 252, 1682, 2277, 2524, 2614 |
| Bme1390I | CCNGG | 3 cut(s) | 1517, 1931, 2930 |
| Bme18I | GGWCC | 3 cut(s) | 4, 1933, 2344 |
| BmeT110I | CYCGRG | 2 cut(s) | 221, 2142 |
| BmgT120I | GGNCC | 5 cut(s) | 4, 1083, 1933, 1938, 2344 |
| BmiI | GGNNCC | 6 cut(s) | 6, 338, 764, 1138, 1309, 2251 |
| BmrFI | CCNGG | 3 cut(s) | 1517, 1931, 2930 |
| BmrI | ACTGGG | 4 cut(s) | 1624, 2310, 2729, 2801 |
| BmsI | GCATC | 7 cut(s) | 675, 787, 1786, 2149, 2170, 2417, 2878 |
| BmtI | GCTAGC | 2 cut(s) | 1179, 3032 |
| BmuI | ACTGGG | 4 cut(s) | 1624, 2310, 2729, 2801 |
| BpmI | CTGGAG | 3 cut(s) | 492, 2088, 3018 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1429 |
| BpuEI | CTTGAG | 3 cut(s) | 1684, 2243, 2702 |
| Bsa29I | ATCGAT | 2 cut(s) | 741, 874 |
| BsaAI | YACGTR | 1 cut(s) | 2060 |
| BsaBI | GATNNNNATC | 2 cut(s) | 318, 2826 |
| BsaI | GGTCTC | 1 cut(s) | 418 |
| BsaJI | CCNNGG | 2 cut(s) | 332, 2377 |
| BsaWI | WCCGGW | 1 cut(s) | 973 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 2086, 2116, 2862, 2892, 2978, 3008 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1353, 2976 |
| Bse118I | RCCGGY | 2 cut(s) | 836, 1935 |
| Bse3DI | GCAATG | 1 cut(s) | 1587 |
| Bse8I | GATNNNNATC | 2 cut(s) | 318, 2826 |
| BseAI | TCCGGA | 1 cut(s) | 973 |
| BseBI | CCWGG | 3 cut(s) | 1517, 1931, 2930 |
| BseCI | ATCGAT | 2 cut(s) | 741, 874 |
| BseDI | CCNNGG | 2 cut(s) | 332, 2377 |
| BseJI | GATNNNNATC | 2 cut(s) | 318, 2826 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1353, 2976 |
| BseMI | GCAATG | 1 cut(s) | 1587 |
| BseMII | CTCAG | 7 cut(s) | 271, 318, 668, 882, 1443, 2041, 2736 |
| BsePI | GCGCGC | 1 cut(s) | 65 |
| BseRI | GAGGAG | 3 cut(s) | 1799, 2849, 2897 |
| BseXI | GCAGC | 3 cut(s) | 262, 2534, 2599 |
| BseYI | CCCAGC | 4 cut(s) | 1951, 2212, 2278, 2464 |
| BsgI | GTGCAG | 1 cut(s) | 2861 |
| Bsh1236I | CGCG | 3 cut(s) | 67, 90, 1885 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2540 |
| BshFI | GGCC | 5 cut(s) | 1085, 1292, 1771, 1939, 2627 |
| BshVI | ATCGAT | 2 cut(s) | 741, 874 |
| BsiEI | CGRYCG | 1 cut(s) | 2540 |
| BsiHKAI | GWGCWC | 5 cut(s) | 139, 207, 228, 395, 1809 |
| BsiHKCI | CYCGRG | 2 cut(s) | 221, 2142 |
| BsiSI | CCGG | 4 cut(s) | 837, 974, 1111, 1936 |
| BslFI | GGGAC | 2 cut(s) | 914, 1868 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1353, 2976 |
| BsmAI | GTCTC | 6 cut(s) | 41, 110, 418, 775, 1750, 2867 |
| BsmBI | CGTCTC | 1 cut(s) | 41 |
| BsmFI | GGGAC | 2 cut(s) | 914, 1868 |
| BsmI | GAATGC | 4 cut(s) | 1628, 2444, 2486, 2709 |
| BsnI | GGCC | 5 cut(s) | 1085, 1292, 1771, 1939, 2627 |
| Bso31I | GGTCTC | 1 cut(s) | 418 |
| BsoBI | CYCGRG | 2 cut(s) | 221, 2142 |
| Bsp1286I | GDGCHC | 6 cut(s) | 139, 207, 228, 395, 1809, 2254 |
| Bsp13I | TCCGGA | 1 cut(s) | 973 |
| Bsp1407I | TGTACA | 1 cut(s) | 366 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1429 |
| Bsp19I | CCATGG | 1 cut(s) | 332 |
| Bsp68I | TCGCGA | 2 cut(s) | 90, 1885 |
| BspACI | CCGC | 8 cut(s) | 174, 208, 274, 840, 1188, 1680, 2275, 2633 |
| BspANI | GGCC | 5 cut(s) | 1085, 1292, 1771, 1939, 2627 |
| BspCNI | CTCAG | 7 cut(s) | 270, 319, 667, 881, 1442, 2040, 2737 |
| BspDI | ATCGAT | 2 cut(s) | 741, 874 |
| BspEI | TCCGGA | 1 cut(s) | 973 |
| BspFNI | CGCG | 3 cut(s) | 67, 90, 1885 |
| BspHI | TCATGA | 1 cut(s) | 2830 |
| BspLI | GGNNCC | 6 cut(s) | 6, 338, 764, 1138, 1309, 2251 |
| BspMAI | CTGCAG | 2 cut(s) | 961, 2617 |
| BspMI | ACCTGC | 1 cut(s) | 2656 |
| BspOI | GCTAGC | 2 cut(s) | 1179, 3032 |
| BspPI | GGATC | 6 cut(s) | 321, 331, 344, 1413, 2624, 2835 |
| BspTNI | GGTCTC | 1 cut(s) | 418 |
| BsrDI | GCAATG | 1 cut(s) | 1587 |
| BsrFI | RCCGGY | 2 cut(s) | 836, 1935 |
| BsrGI | TGTACA | 1 cut(s) | 366 |
| BssAI | RCCGGY | 2 cut(s) | 836, 1935 |
| BssECI | CCNNGG | 2 cut(s) | 332, 2377 |
| BssHII | GCGCGC | 1 cut(s) | 65 |
| BssNAI | GTATAC | 1 cut(s) | 499 |
| BssT1I | CCWWGG | 2 cut(s) | 332, 2377 |
| Bst1107I | GTATAC | 1 cut(s) | 499 |
| Bst2UI | CCWGG | 3 cut(s) | 1517, 1931, 2930 |
| Bst6I | CTCTTC | 2 cut(s) | 1882, 2931 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2414 |
| BstAUI | TGTACA | 1 cut(s) | 366 |
| BstBAI | YACGTR | 1 cut(s) | 2060 |
| BstC8I | GCNNGC | 8 cut(s) | 67, 71, 92, 1177, 2076, 2754, 2786, 3030 |
| BstDEI | CTNAG | 8 cut(s) | 257, 327, 654, 868, 1429, 2027, 2745, 2764 |
| BstDSI | CCRYGG | 1 cut(s) | 332 |
| BstEII | GGTNACC | 1 cut(s) | 1912 |
| BstFNI | CGCG | 3 cut(s) | 67, 90, 1885 |
| BstHHI | GCGC | 3 cut(s) | 67, 69, 109 |
| BstMAI | GTCTC | 6 cut(s) | 41, 110, 418, 775, 1750, 2867 |
| BstMCI | CGRYCG | 1 cut(s) | 2540 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 259, 1185, 2180, 2249, 2414, 2531 |
| BstNI | CCWGG | 3 cut(s) | 1517, 1931, 2930 |
| BstNSI | RCATGY | 4 cut(s) | 487, 613, 2078, 2788 |
| BstPI | GGTNACC | 1 cut(s) | 1912 |
| BstSCI | CCNGG | 3 cut(s) | 1515, 1929, 2928 |
| BstSFI | CTRYAG | 6 cut(s) | 957, 1266, 1548, 2175, 2244, 2613 |
| BstUI | CGCG | 3 cut(s) | 67, 90, 1885 |
| BstV1I | GCAGC | 3 cut(s) | 262, 2534, 2599 |
| BstX2I | RGATCY | 5 cut(s) | 313, 336, 756, 1418, 2821 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2767 |
| BstYI | RGATCY | 5 cut(s) | 313, 336, 756, 1418, 2821 |
| BstZ17I | GTATAC | 1 cut(s) | 499 |
| Bsu15I | ATCGAT | 2 cut(s) | 741, 874 |
| BsuI | GTATCC | 3 cut(s) | 2006, 2505, 2652 |
| BsuRI | GGCC | 5 cut(s) | 1085, 1292, 1771, 1939, 2627 |
| BsuTUI | ATCGAT | 2 cut(s) | 741, 874 |
| BtgI | CCRYGG | 1 cut(s) | 332 |
| BtsI | GCAGTG | 1 cut(s) | 464 |
| BtsIMutI | CAGTG | 6 cut(s) | 464, 747, 1458, 1768, 2162, 2298 |
| BtuMI | TCGCGA | 2 cut(s) | 90, 1885 |
| BveI | ACCTGC | 1 cut(s) | 2656 |
| Cac8I | GCNNGC | 8 cut(s) | 67, 71, 92, 1177, 2076, 2754, 2786, 3030 |
| CaiI | CAGNNNCTG | 1 cut(s) | 119 |
| CciI | TCATGA | 1 cut(s) | 2830 |
| CfoI | GCGC | 3 cut(s) | 67, 69, 109 |
| Cfr10I | RCCGGY | 2 cut(s) | 836, 1935 |
| Cfr13I | GGNCC | 5 cut(s) | 4, 1083, 1933, 1938, 2344 |
| ClaI | ATCGAT | 2 cut(s) | 741, 874 |
| Csp6I | GTAC | 8 cut(s) | 367, 651, 1093, 1166, 1384, 1945, 2041, 2542 |
| CviQI | GTAC | 8 cut(s) | 367, 651, 1093, 1166, 1384, 1945, 2041, 2542 |
| DdeI | CTNAG | 8 cut(s) | 257, 327, 654, 868, 1429, 2027, 2745, 2764 |
| DraIII | CACNNNGTG | 1 cut(s) | 682 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1862 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1862 |
| EaeI | YGGCCR | 2 cut(s) | 1290, 2625 |
| Eam1104I | CTCTTC | 2 cut(s) | 1882, 2931 |
| EarI | CTCTTC | 2 cut(s) | 1882, 2931 |
| Ecl136II | GAGCTC | 4 cut(s) | 137, 205, 226, 1807 |
| Eco130I | CCWWGG | 2 cut(s) | 332, 2377 |
| Eco147I | AGGCCT | 1 cut(s) | 1771 |
| Eco24I | GRGCYC | 5 cut(s) | 139, 207, 228, 1809, 2254 |
| Eco31I | GGTCTC | 1 cut(s) | 418 |
| Eco32I | GATATC | 2 cut(s) | 268, 1958 |
| Eco47I | GGWCC | 3 cut(s) | 4, 1933, 2344 |
| Eco53kI | GAGCTC | 4 cut(s) | 137, 205, 226, 1807 |
| Eco57I | CTGAAG | 3 cut(s) | 2340, 2538, 3039 |
| Eco88I | CYCGRG | 2 cut(s) | 221, 2142 |
| Eco91I | GGTNACC | 1 cut(s) | 1912 |
| EcoICRI | GAGCTC | 4 cut(s) | 137, 205, 226, 1807 |
| EcoO65I | GGTNACC | 1 cut(s) | 1912 |
| EcoRII | CCWGG | 3 cut(s) | 1515, 1929, 2928 |
| EcoRV | GATATC | 2 cut(s) | 268, 1958 |
| EcoT14I | CCWWGG | 2 cut(s) | 332, 2377 |
| EcoT22I | ATGCAT | 1 cut(s) | 2486 |
| EcoT38I | GRGCYC | 5 cut(s) | 139, 207, 228, 1809, 2254 |
| ErhI | CCWWGG | 2 cut(s) | 332, 2377 |
| Esp3I | CGTCTC | 1 cut(s) | 41 |
| FaqI | GGGAC | 2 cut(s) | 914, 1868 |
| FauNDI | CATATG | 2 cut(s) | 586, 1601 |
| FblI | GTMKAC | 3 cut(s) | 498, 1866, 2218 |
| Fnu4HI | GCNGC | 5 cut(s) | 251, 1681, 2276, 2523, 2613 |
| FriOI | GRGCYC | 5 cut(s) | 139, 207, 228, 1809, 2254 |
| Fsp4HI | GCNGC | 5 cut(s) | 251, 1681, 2276, 2523, 2613 |
| FspBI | CTAG | 3 cut(s) | 1176, 1784, 3029 |
| GlaI | GCGC | 3 cut(s) | 66, 68, 108 |
| GluI | GCNGC | 5 cut(s) | 251, 1681, 2276, 2523, 2613 |
| GsaI | CCCAGC | 4 cut(s) | 1955, 2216, 2282, 2468 |
| GsuI | CTGGAG | 3 cut(s) | 492, 2088, 3018 |
| HaeIII | GGCC | 5 cut(s) | 1085, 1292, 1771, 1939, 2627 |
| HapII | CCGG | 4 cut(s) | 837, 974, 1111, 1936 |
| HhaI | GCGC | 3 cut(s) | 67, 69, 109 |
| Hin6I | GCGC | 3 cut(s) | 65, 67, 107 |
| HinP1I | GCGC | 3 cut(s) | 65, 67, 107 |
| HincII | GTYRAC | 1 cut(s) | 826 |
| HindII | GTYRAC | 1 cut(s) | 826 |
| HindIII | AAGCTT | 1 cut(s) | 2306 |
| HinfI | GANTC | 7 cut(s) | 179, 1706, 2138, 2261, 2618, 2684, 2894 |
| HpaII | CCGG | 4 cut(s) | 837, 974, 1111, 1936 |
| HphI | GGTGA | 5 cut(s) | 826, 854, 1919, 1919, 2876 |
| Hpy166II | GTNNAC | 8 cut(s) | 367, 499, 826, 1106, 1867, 2219, 2298, 2507 |
| Hpy8I | GTNNAC | 8 cut(s) | 367, 499, 826, 1106, 1867, 2219, 2298, 2507 |
| HpyAV | CCTTC | 7 cut(s) | 204, 659, 1127, 1291, 1347, 1761, 2861 |
| HpyCH4IV | ACGT | 6 cut(s) | 103, 1075, 1511, 1639, 1662, 2059 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 259, 1185, 2180, 2249, 2414, 2531 |
| HpyF3I | CTNAG | 8 cut(s) | 257, 327, 654, 868, 1429, 2027, 2745, 2764 |
| HpySE526I | ACGT | 6 cut(s) | 103, 1075, 1511, 1639, 1662, 2059 |
| HspAI | GCGC | 3 cut(s) | 65, 67, 107 |
| Kpn2I | TCCGGA | 1 cut(s) | 973 |
| LmnI | GCTCC | 9 cut(s) | 202, 210, 473, 1136, 1250, 1812, 2071, 2249, 3037 |
| Lsp1109I | GCAGC | 3 cut(s) | 262, 2534, 2599 |
| LweI | GCATC | 7 cut(s) | 675, 787, 1786, 2149, 2170, 2417, 2878 |
| MaeI | CTAG | 3 cut(s) | 1176, 1784, 3029 |
| MaeII | ACGT | 6 cut(s) | 103, 1075, 1511, 1639, 1662, 2059 |
| MaeIII | GTNAC | 4 cut(s) | 384, 691, 1313, 1912 |
| MfeI | CAATTG | 2 cut(s) | 817, 2981 |
| MflI | RGATCY | 5 cut(s) | 313, 336, 756, 1418, 2821 |
| MhlI | GDGCHC | 6 cut(s) | 139, 207, 228, 395, 1809, 2254 |
| MlyI | GAGTC | 3 cut(s) | 188, 2693, 2888 |
| MmeI | TCCRAC | 6 cut(s) | 599, 623, 1228, 2117, 2133, 2922 |
| Mph1103I | ATGCAT | 1 cut(s) | 2486 |
| MroI | TCCGGA | 1 cut(s) | 973 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1560, 2118, 2449 |
| MspA1I | CMGCKG | 3 cut(s) | 2212, 2491, 3038 |
| MspI | CCGG | 4 cut(s) | 837, 974, 1111, 1936 |
| MspR9I | CCNGG | 3 cut(s) | 1517, 1931, 2930 |
| MunI | CAATTG | 2 cut(s) | 817, 2981 |
| Mva1269I | GAATGC | 4 cut(s) | 1628, 2444, 2486, 2709 |
| MvaI | CCWGG | 3 cut(s) | 1517, 1931, 2930 |
| MvnI | CGCG | 3 cut(s) | 67, 90, 1885 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 259, 1185, 2180, 2249, 2414, 2531 |
| NcoI | CCATGG | 1 cut(s) | 332 |
| NdeI | CATATG | 2 cut(s) | 586, 1601 |
| NheI | GCTAGC | 2 cut(s) | 1175, 3028 |
| NlaIV | GGNNCC | 6 cut(s) | 6, 338, 764, 1138, 1309, 2251 |
| NmeAIII | GCCGAG | 1 cut(s) | 202 |
| NmuCI | GTSAC | 3 cut(s) | 384, 691, 1313 |
| NruI | TCGCGA | 2 cut(s) | 90, 1885 |
| NsiI | ATGCAT | 1 cut(s) | 2486 |
| NspI | RCATGY | 4 cut(s) | 487, 613, 2078, 2788 |
| PaeI | GCATGC | 2 cut(s) | 2078, 2788 |
| PaeR7I | CTCGAG | 2 cut(s) | 221, 2142 |
| PagI | TCATGA | 1 cut(s) | 2830 |
| PauI | GCGCGC | 1 cut(s) | 65 |
| PceI | AGGCCT | 1 cut(s) | 1771 |
| PciI | ACATGT | 1 cut(s) | 483 |
| PctI | GAATGC | 4 cut(s) | 1628, 2444, 2486, 2709 |
| PfeI | GAWTC | 4 cut(s) | 1706, 2138, 2261, 2618 |
| PfoI | TCCNGGA | 1 cut(s) | 1515 |
| PkrI | GCNGC | 5 cut(s) | 252, 1682, 2277, 2524, 2614 |
| Ple19I | CGATCG | 1 cut(s) | 2540 |
| PleI | GAGTC | 3 cut(s) | 187, 2692, 2888 |
| PpsI | GAGTC | 3 cut(s) | 187, 2692, 2888 |
| Ppu21I | YACGTR | 1 cut(s) | 2060 |
| PscI | ACATGT | 1 cut(s) | 483 |
| PsiI | TTATAA | 2 cut(s) | 507, 989 |
| Psp124BI | GAGCTC | 4 cut(s) | 139, 207, 228, 1809 |
| Psp1406I | AACGTT | 2 cut(s) | 1511, 1662 |
| Psp6I | CCWGG | 3 cut(s) | 1515, 1929, 2928 |
| PspEI | GGTNACC | 1 cut(s) | 1912 |
| PspFI | CCCAGC | 4 cut(s) | 1951, 2212, 2278, 2464 |
| PspGI | CCWGG | 3 cut(s) | 1515, 1929, 2928 |
| PspN4I | GGNNCC | 6 cut(s) | 6, 338, 764, 1138, 1309, 2251 |
| PspPI | GGNCC | 5 cut(s) | 4, 1083, 1933, 1938, 2344 |
| PspXI | VCTCGAGB | 1 cut(s) | 221 |
| PstI | CTGCAG | 2 cut(s) | 961, 2617 |
| PstNI | CAGNNNCTG | 1 cut(s) | 119 |
| PsuI | RGATCY | 5 cut(s) | 313, 336, 756, 1418, 2821 |
| PteI | GCGCGC | 1 cut(s) | 65 |
| PvuI | CGATCG | 1 cut(s) | 2540 |
| PvuII | CAGCTG | 3 cut(s) | 2212, 2491, 3038 |
| RruI | TCGCGA | 2 cut(s) | 90, 1885 |
| RsaI | GTAC | 8 cut(s) | 368, 652, 1094, 1167, 1385, 1946, 2042, 2543 |
| RsaNI | GTAC | 8 cut(s) | 367, 651, 1093, 1166, 1384, 1945, 2041, 2542 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1560, 2118, 2449 |
| SacI | GAGCTC | 4 cut(s) | 139, 207, 228, 1809 |
| SatI | GCNGC | 5 cut(s) | 251, 1681, 2276, 2523, 2613 |
| Sau96I | GGNCC | 5 cut(s) | 4, 1083, 1933, 1938, 2344 |
| SchI | GAGTC | 3 cut(s) | 188, 2693, 2888 |
| ScrFI | CCNGG | 3 cut(s) | 1517, 1931, 2930 |
| SduI | GDGCHC | 6 cut(s) | 139, 207, 228, 395, 1809, 2254 |
| SfaNI | GCATC | 7 cut(s) | 675, 787, 1786, 2149, 2170, 2417, 2878 |
| SfcI | CTRYAG | 6 cut(s) | 957, 1266, 1548, 2175, 2244, 2613 |
| Sfr274I | CTCGAG | 2 cut(s) | 221, 2142 |
| SgrAI | CRCCGGYG | 1 cut(s) | 836 |
| SinI | GGWCC | 3 cut(s) | 4, 1933, 2344 |
| SlaI | CTCGAG | 2 cut(s) | 221, 2142 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1560, 2118, 2449 |
| SmlI | CTYRAG | 5 cut(s) | 221, 1699, 2142, 2222, 2681 |
| SmoI | CTYRAG | 5 cut(s) | 221, 1699, 2142, 2222, 2681 |
| SphI | GCATGC | 2 cut(s) | 2078, 2788 |
| SseBI | AGGCCT | 1 cut(s) | 1771 |
| SsiI | CCGC | 8 cut(s) | 174, 208, 274, 840, 1188, 1680, 2275, 2633 |
| SspMI | CTAG | 3 cut(s) | 1176, 1784, 3029 |
| SstI | GAGCTC | 4 cut(s) | 139, 207, 228, 1809 |
| StuI | AGGCCT | 1 cut(s) | 1771 |
| StyD4I | CCNGG | 3 cut(s) | 1515, 1929, 2928 |
| StyI | CCWWGG | 2 cut(s) | 332, 2377 |
| TaiI | ACGT | 6 cut(s) | 106, 1078, 1514, 1642, 1665, 2062 |
| TaqII | GACCGA | 1 cut(s) | 420 |
| TatI | WGTACW | 5 cut(s) | 366, 650, 1383, 1944, 2040 |
| TauI | GCSGC | 2 cut(s) | 1683, 2278 |
| TfiI | GAWTC | 4 cut(s) | 1706, 2138, 2261, 2618 |
| TscAI | CASTG | 6 cut(s) | 464, 754, 1458, 1768, 2169, 2305 |
| TseFI | GTSAC | 3 cut(s) | 384, 691, 1313 |
| TseI | GCWGC | 3 cut(s) | 250, 2522, 2612 |
| Tsp45I | GTSAC | 3 cut(s) | 384, 691, 1313 |
| TspDTI | ATGAA | 9 cut(s) | 959, 1112, 1146, 1588, 1698, 1794, 1830, 2702, 2811 |
| TspGWI | ACGGA | 2 cut(s) | 23, 2524 |
| TspRI | CASTG | 6 cut(s) | 464, 754, 1458, 1768, 2169, 2305 |
| VpaK11BI | GGWCC | 3 cut(s) | 4, 1933, 2344 |
| XapI | RAATTY | 7 cut(s) | 278, 784, 1221, 1439, 1463, 1497, 2192 |
| XceI | RCATGY | 4 cut(s) | 487, 613, 2078, 2788 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 330, 1948, 2764 |
| XhoI | CTCGAG | 2 cut(s) | 221, 2142 |
| XmiI | GTMKAC | 3 cut(s) | 498, 1866, 2218 |
| XspI | CTAG | 3 cut(s) | 1176, 1784, 3029 |
| Zsp2I | ATGCAT | 1 cut(s) | 2486 |