The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1022, 1902 |
| Acc16I | TGCGCA | 1 cut(s) | 327 |
| Acc65I | GGTACC | 1 cut(s) | 1198 |
| AccB1I | GGYRCC | 2 cut(s) | 1198, 2966 |
| AccBSI | CCGCTC | 2 cut(s) | 262, 2542 |
| AccI | GTMKAC | 1 cut(s) | 532 |
| AccII | CGCG | 2 cut(s) | 90, 493 |
| AciI | CCGC | 8 cut(s) | 101, 226, 246, 260, 316, 1713, 2542, 2844 |
| AclI | AACGTT | 1 cut(s) | 1544 |
| AcoI | YGGCCR | 1 cut(s) | 1323 |
| AcsI | RAATTY | 6 cut(s) | 482, 823, 1363, 1530, 2118, 2225 |
| AcuI | CTGAAG | 4 cut(s) | 75, 2373, 2442, 2571 |
| AfaI | GTAC | 8 cut(s) | 694, 893, 1200, 1418, 1979, 2075, 2765, 2913 |
| AfeI | AGCGCT | 1 cut(s) | 60 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 850, 1074, 1386, 2629 |
| AflIII | ACRYGT | 3 cut(s) | 525, 535, 1108 |
| AgeI | ACCGGT | 1 cut(s) | 1201 |
| AjiI | CACGTC | 1 cut(s) | 1142 |
| AjnI | CCWGG | 3 cut(s) | 1548, 1913, 2970 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 363, 395 |
| Alw26I | GTCTC | 4 cut(s) | 281, 460, 814, 1783 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 404, 2216 |
| Ama87I | CYCGRG | 1 cut(s) | 2175 |
| Aor51HI | AGCGCT | 1 cut(s) | 60 |
| AoxI | GGCC | 5 cut(s) | 31, 1239, 1323, 1802, 1970 |
| ApeKI | GCWGC | 6 cut(s) | 512, 515, 1840, 2308, 2555, 2645 |
| ApoI | RAATTY | 6 cut(s) | 482, 823, 1363, 1530, 2118, 2225 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2210, 2242 |
| AsiGI | ACCGGT | 1 cut(s) | 1201 |
| Asp718I | GGTACC | 1 cut(s) | 1198 |
| AspLEI | GCGC | 4 cut(s) | 61, 92, 328, 583 |
| AspS9I | GGNCC | 3 cut(s) | 1239, 1966, 1971 |
| AsuHPI | GGTGA | 6 cut(s) | 893, 1418, 1727, 1952, 1957, 2918 |
| AsuNHI | GCTAGC | 1 cut(s) | 1208 |
| AvaI | CYCGRG | 1 cut(s) | 2175 |
| AvaII | GGWCC | 1 cut(s) | 1966 |
| BamHI | GGATCC | 1 cut(s) | 378 |
| BanI | GGYRCC | 2 cut(s) | 1198, 2966 |
| BbsI | GAAGAC | 1 cut(s) | 227 |
| BbvI | GCAGC | 6 cut(s) | 499, 527, 1827, 2320, 2567, 2632 |
| BccI | CCATC | 6 cut(s) | 621, 1034, 1298, 1403, 1484, 2557 |
| BceAI | ACGGC | 1 cut(s) | 1310 |
| BciT130I | CCWGG | 3 cut(s) | 1550, 1915, 2972 |
| BciVI | GTATCC | 2 cut(s) | 2039, 2538 |
| BclI | TGATCA | 2 cut(s) | 781, 913 |
| BcoDI | GTCTC | 4 cut(s) | 281, 460, 814, 1783 |
| BfaI | CTAG | 8 cut(s) | 62, 185, 1209, 1436, 1734, 1817, 2277, 2531 |
| BfmI | CTRYAG | 5 cut(s) | 138, 513, 990, 2208, 2646 |
| BfoI | RGCGCY | 1 cut(s) | 62 |
| BfuI | GTATCC | 2 cut(s) | 2039, 2538 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 301 |
| BglII | AGATCT | 2 cut(s) | 121, 2863 |
| BisI | GCNGC | 8 cut(s) | 102, 513, 516, 1841, 2309, 2556, 2646, 2844 |
| BlpI | GCTNAGC | 2 cut(s) | 110, 2757 |
| BlsI | GCNGC | 8 cut(s) | 103, 514, 517, 1842, 2310, 2557, 2647, 2845 |
| Bme1390I | CCNGG | 3 cut(s) | 1550, 1915, 2972 |
| Bme18I | GGWCC | 1 cut(s) | 1966 |
| BmeT110I | CYCGRG | 1 cut(s) | 2175 |
| BmgBI | CACGTC | 1 cut(s) | 1142 |
| BmgT120I | GGNCC | 3 cut(s) | 1239, 1966, 1971 |
| BmiI | GGNNCC | 5 cut(s) | 380, 1171, 1200, 1342, 2968 |
| BmrFI | CCNGG | 3 cut(s) | 1550, 1915, 2972 |
| BmrI | ACTGGG | 3 cut(s) | 1657, 2762, 2843 |
| BmsI | GCATC | 7 cut(s) | 257, 370, 826, 1819, 2182, 2407, 2526 |
| BmtI | GCTAGC | 1 cut(s) | 1212 |
| BmuI | ACTGGG | 3 cut(s) | 1657, 2762, 2843 |
| BpiI | GAAGAC | 1 cut(s) | 227 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2915, 2947 |
| BpmI | CTGGAG | 2 cut(s) | 263, 2276 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1008 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 110, 2757 |
| BpuEI | CTTGAG | 1 cut(s) | 2735 |
| BsaAI | YACGTR | 1 cut(s) | 536 |
| BsaBI | GATNNNNATC | 3 cut(s) | 360, 1353, 2868 |
| BsaJI | CCNNGG | 5 cut(s) | 34, 374, 435, 555, 2970 |
| BsaWI | WCCGGW | 1 cut(s) | 1201 |
| BsaXI | ACNNNNNCTCC | 3 cut(s) | 2921, 2951, 2966 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 850, 1074, 1386, 2629 |
| Bse118I | RCCGGY | 2 cut(s) | 1201, 1968 |
| Bse3DI | GCAATG | 2 cut(s) | 506, 1620 |
| Bse8I | GATNNNNATC | 3 cut(s) | 360, 1353, 2868 |
| BseBI | CCWGG | 3 cut(s) | 1550, 1915, 2972 |
| BseDI | CCNNGG | 5 cut(s) | 34, 374, 435, 555, 2970 |
| BseJI | GATNNNNATC | 3 cut(s) | 360, 1353, 2868 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 850, 1074, 1386, 2629 |
| BseMI | GCAATG | 2 cut(s) | 506, 1620 |
| BseRI | GAGGAG | 5 cut(s) | 246, 1900, 2891, 2900, 2939 |
| BseXI | GCAGC | 6 cut(s) | 499, 527, 1827, 2320, 2567, 2632 |
| BseYI | CCCAGC | 4 cut(s) | 2245, 2311, 2497, 2582 |
| BsgI | GTGCAG | 1 cut(s) | 98 |
| Bsh1236I | CGCG | 2 cut(s) | 90, 493 |
| BshFI | GGCC | 5 cut(s) | 33, 1241, 1325, 1804, 1972 |
| BshNI | GGYRCC | 2 cut(s) | 1198, 2966 |
| BshTI | ACCGGT | 1 cut(s) | 1201 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2175 |
| BsiSI | CCGG | 2 cut(s) | 1202, 1969 |
| BslFI | GGGAC | 2 cut(s) | 947, 1615 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 850, 1074, 1386, 2629 |
| BsmAI | GTCTC | 4 cut(s) | 281, 460, 814, 1783 |
| BsmBI | CGTCTC | 1 cut(s) | 281 |
| BsmFI | GGGAC | 2 cut(s) | 947, 1615 |
| BsmI | GAATGC | 6 cut(s) | 297, 712, 1060, 1661, 2477, 2519 |
| BsnI | GGCC | 5 cut(s) | 33, 1241, 1325, 1804, 1972 |
| BsoBI | CYCGRG | 1 cut(s) | 2175 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 110, 2757 |
| Bsp19I | CCATGG | 3 cut(s) | 374, 435, 555 |
| BspACI | CCGC | 8 cut(s) | 101, 226, 246, 260, 316, 1713, 2542, 2844 |
| BspANI | GGCC | 5 cut(s) | 33, 1241, 1325, 1804, 1972 |
| BspFNI | CGCG | 2 cut(s) | 90, 493 |
| BspHI | TCATGA | 1 cut(s) | 2872 |
| BspLI | GGNNCC | 5 cut(s) | 380, 1171, 1200, 1342, 2968 |
| BspMAI | CTGCAG | 3 cut(s) | 517, 994, 2650 |
| BspOI | GCTAGC | 1 cut(s) | 1212 |
| BspT107I | GGYRCC | 2 cut(s) | 1198, 2966 |
| BsrBI | CCGCTC | 2 cut(s) | 262, 2542 |
| BsrDI | GCAATG | 2 cut(s) | 506, 1620 |
| BsrFI | RCCGGY | 2 cut(s) | 1201, 1968 |
| BssAI | RCCGGY | 2 cut(s) | 1201, 1968 |
| BssECI | CCNNGG | 5 cut(s) | 34, 374, 435, 555, 2970 |
| BssNAI | GTATAC | 1 cut(s) | 533 |
| BssT1I | CCWWGG | 4 cut(s) | 34, 374, 435, 555 |
| Bst1107I | GTATAC | 1 cut(s) | 533 |
| Bst2UI | CCWGG | 3 cut(s) | 1550, 1915, 2972 |
| Bst6I | CTCTTC | 2 cut(s) | 1786, 2973 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 98 |
| BstBAI | YACGTR | 1 cut(s) | 536 |
| BstC8I | GCNNGC | 9 cut(s) | 77, 94, 285, 1210, 2109, 2390, 2790, 2794, 2822 |
| BstDSI | CCRYGG | 3 cut(s) | 374, 435, 555 |
| BstEII | GGTNACC | 1 cut(s) | 1945 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2627 |
| BstFNI | CGCG | 2 cut(s) | 90, 493 |
| BstH2I | RGCGCY | 1 cut(s) | 62 |
| BstHHI | GCGC | 4 cut(s) | 61, 92, 328, 583 |
| BstMAI | GTCTC | 4 cut(s) | 281, 460, 814, 1783 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 65, 98, 301, 2282, 2447, 2564 |
| BstNI | CCWGG | 3 cut(s) | 1550, 1915, 2972 |
| BstNSI | RCATGY | 3 cut(s) | 529, 655, 2824 |
| BstPI | GGTNACC | 1 cut(s) | 1945 |
| BstSCI | CCNGG | 3 cut(s) | 1548, 1913, 2970 |
| BstSFI | CTRYAG | 5 cut(s) | 138, 513, 990, 2208, 2646 |
| BstUI | CGCG | 2 cut(s) | 90, 493 |
| BstV1I | GCAGC | 6 cut(s) | 499, 527, 1827, 2320, 2567, 2632 |
| BstV2I | GAAGAC | 1 cut(s) | 227 |
| BstX2I | RGATCY | 9 cut(s) | 121, 332, 355, 378, 905, 1451, 2212, 2662, 2863 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2245 |
| BstYI | RGATCY | 9 cut(s) | 121, 332, 355, 378, 905, 1451, 2212, 2662, 2863 |
| BstZ17I | GTATAC | 1 cut(s) | 533 |
| BsuI | GTATCC | 2 cut(s) | 2039, 2538 |
| BsuRI | GGCC | 5 cut(s) | 33, 1241, 1325, 1804, 1972 |
| BtgI | CCRYGG | 3 cut(s) | 374, 435, 555 |
| BtrI | CACGTC | 1 cut(s) | 1142 |
| BtsI | GCAGTG | 1 cut(s) | 918 |
| BtsIMutI | CAGTG | 8 cut(s) | 592, 786, 873, 918, 1801, 2158, 2195, 2727 |
| Cac8I | GCNNGC | 9 cut(s) | 77, 94, 285, 1210, 2109, 2390, 2790, 2794, 2822 |
| CaiI | CAGNNNCTG | 2 cut(s) | 404, 2216 |
| CciI | TCATGA | 1 cut(s) | 2872 |
| CfoI | GCGC | 4 cut(s) | 61, 92, 328, 583 |
| Cfr10I | RCCGGY | 2 cut(s) | 1201, 1968 |
| Cfr13I | GGNCC | 3 cut(s) | 1239, 1966, 1971 |
| CseI | GACGC | 1 cut(s) | 96 |
| Csp6I | GTAC | 8 cut(s) | 693, 892, 1199, 1417, 1978, 2074, 2764, 2912 |
| CspAI | ACCGGT | 1 cut(s) | 1201 |
| CviQI | GTAC | 8 cut(s) | 693, 892, 1199, 1417, 1978, 2074, 2764, 2912 |
| EaeI | YGGCCR | 1 cut(s) | 1323 |
| Eam1104I | CTCTTC | 2 cut(s) | 1786, 2973 |
| EarI | CTCTTC | 2 cut(s) | 1786, 2973 |
| EciI | GGCGGA | 1 cut(s) | 215 |
| Eco130I | CCWWGG | 4 cut(s) | 34, 374, 435, 555 |
| Eco32I | GATATC | 1 cut(s) | 1991 |
| Eco47I | GGWCC | 1 cut(s) | 1966 |
| Eco47III | AGCGCT | 1 cut(s) | 60 |
| Eco57I | CTGAAG | 4 cut(s) | 75, 2373, 2442, 2571 |
| Eco88I | CYCGRG | 1 cut(s) | 2175 |
| Eco91I | GGTNACC | 1 cut(s) | 1945 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2627 |
| EcoO65I | GGTNACC | 1 cut(s) | 1945 |
| EcoRII | CCWGG | 3 cut(s) | 1548, 1913, 2970 |
| EcoRV | GATATC | 1 cut(s) | 1991 |
| EcoT14I | CCWWGG | 4 cut(s) | 34, 374, 435, 555 |
| EcoT22I | ATGCAT | 1 cut(s) | 2519 |
| ErhI | CCWWGG | 4 cut(s) | 34, 374, 435, 555 |
| Esp3I | CGTCTC | 1 cut(s) | 281 |
| FaqI | GGGAC | 2 cut(s) | 947, 1615 |
| FauNDI | CATATG | 1 cut(s) | 628 |
| FbaI | TGATCA | 2 cut(s) | 781, 913 |
| FblI | GTMKAC | 1 cut(s) | 532 |
| Fnu4HI | GCNGC | 8 cut(s) | 102, 513, 516, 1841, 2309, 2556, 2646, 2844 |
| Fsp4HI | GCNGC | 8 cut(s) | 102, 513, 516, 1841, 2309, 2556, 2646, 2844 |
| FspBI | CTAG | 8 cut(s) | 62, 185, 1209, 1436, 1734, 1817, 2277, 2531 |
| FspI | TGCGCA | 1 cut(s) | 327 |
| GlaI | GCGC | 4 cut(s) | 60, 91, 327, 582 |
| GluI | GCNGC | 8 cut(s) | 102, 513, 516, 1841, 2309, 2556, 2646, 2844 |
| GsaI | CCCAGC | 4 cut(s) | 2249, 2315, 2501, 2586 |
| GsuI | CTGGAG | 2 cut(s) | 263, 2276 |
| HaeII | RGCGCY | 1 cut(s) | 62 |
| HaeIII | GGCC | 5 cut(s) | 33, 1241, 1325, 1804, 1972 |
| HapII | CCGG | 2 cut(s) | 1202, 1969 |
| HgaI | GACGC | 1 cut(s) | 96 |
| HhaI | GCGC | 4 cut(s) | 61, 92, 328, 583 |
| Hin6I | GCGC | 4 cut(s) | 59, 90, 326, 581 |
| HinP1I | GCGC | 4 cut(s) | 59, 90, 326, 581 |
| HincII | GTYRAC | 1 cut(s) | 163 |
| HindII | GTYRAC | 1 cut(s) | 163 |
| HinfI | GANTC | 9 cut(s) | 802, 1739, 1920, 2171, 2294, 2651, 2717, 2930, 2936 |
| HpaII | CCGG | 2 cut(s) | 1202, 1969 |
| HphI | GGTGA | 6 cut(s) | 893, 1418, 1727, 1952, 1957, 2918 |
| Hpy166II | GTNNAC | 4 cut(s) | 163, 533, 541, 693 |
| Hpy188III | TCNNGA | 9 cut(s) | 399, 415, 1193, 1964, 2175, 2216, 2255, 2867, 2873 |
| Hpy8I | GTNNAC | 4 cut(s) | 163, 533, 541, 693 |
| Hpy99I | CGWCG | 2 cut(s) | 276, 1146 |
| HpyAV | CCTTC | 8 cut(s) | 239, 701, 962, 1160, 1324, 1380, 1794, 2417 |
| HpyCH4IV | ACGT | 6 cut(s) | 27, 535, 1108, 1141, 1544, 1574 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 65, 98, 301, 2282, 2447, 2564 |
| HpySE526I | ACGT | 6 cut(s) | 27, 535, 1108, 1141, 1544, 1574 |
| HspAI | GCGC | 4 cut(s) | 59, 90, 326, 581 |
| KpnI | GGTACC | 1 cut(s) | 1202 |
| Ksp22I | TGATCA | 2 cut(s) | 781, 913 |
| LmnI | GCTCC | 2 cut(s) | 248, 267 |
| Lsp1109I | GCAGC | 6 cut(s) | 499, 527, 1827, 2320, 2567, 2632 |
| LweI | GCATC | 7 cut(s) | 257, 370, 826, 1819, 2182, 2407, 2526 |
| MaeI | CTAG | 8 cut(s) | 62, 185, 1209, 1436, 1734, 1817, 2277, 2531 |
| MaeII | ACGT | 6 cut(s) | 27, 535, 1108, 1141, 1544, 1574 |
| MaeIII | GTNAC | 5 cut(s) | 426, 487, 587, 733, 1945 |
| MbiI | CCGCTC | 2 cut(s) | 262, 2542 |
| MfeI | CAATTG | 2 cut(s) | 856, 2445 |
| MflI | RGATCY | 9 cut(s) | 121, 332, 355, 378, 905, 1451, 2212, 2662, 2863 |
| MlyI | GAGTC | 4 cut(s) | 1914, 2726, 2924, 2930 |
| MmeI | TCCRAC | 6 cut(s) | 389, 641, 1124, 1591, 2150, 2166 |
| Mph1103I | ATGCAT | 1 cut(s) | 2519 |
| MseI | TTAA | 6 cut(s) | 312, 567, 741, 896, 1689, 2634 |
| MslI | CAYNNNNRTG | 4 cut(s) | 731, 1593, 2151, 2829 |
| MspA1I | CMGCKG | 4 cut(s) | 2245, 2311, 2524, 2756 |
| MspI | CCGG | 2 cut(s) | 1202, 1969 |
| MspR9I | CCNGG | 3 cut(s) | 1550, 1915, 2972 |
| MunI | CAATTG | 2 cut(s) | 856, 2445 |
| Mva1269I | GAATGC | 6 cut(s) | 297, 712, 1060, 1661, 2477, 2519 |
| MvaI | CCWGG | 3 cut(s) | 1550, 1915, 2972 |
| MvnI | CGCG | 2 cut(s) | 90, 493 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 65, 98, 301, 2282, 2447, 2564 |
| NcoI | CCATGG | 3 cut(s) | 374, 435, 555 |
| NdeI | CATATG | 1 cut(s) | 628 |
| NheI | GCTAGC | 1 cut(s) | 1208 |
| NlaIV | GGNNCC | 5 cut(s) | 380, 1171, 1200, 1342, 2968 |
| NmeAIII | GCCGAG | 1 cut(s) | 1442 |
| NmuCI | GTSAC | 4 cut(s) | 426, 587, 733, 1945 |
| NsbI | TGCGCA | 1 cut(s) | 327 |
| NsiI | ATGCAT | 1 cut(s) | 2519 |
| NspI | RCATGY | 3 cut(s) | 529, 655, 2824 |
| PaeI | GCATGC | 1 cut(s) | 2824 |
| PaeR7I | CTCGAG | 1 cut(s) | 2175 |
| PagI | TCATGA | 1 cut(s) | 2872 |
| PciI | ACATGT | 1 cut(s) | 525 |
| PctI | GAATGC | 6 cut(s) | 297, 712, 1060, 1661, 2477, 2519 |
| PfeI | GAWTC | 5 cut(s) | 802, 1739, 2171, 2294, 2651 |
| PfoI | TCCNGGA | 1 cut(s) | 1548 |
| PinAI | ACCGGT | 1 cut(s) | 1201 |
| PkrI | GCNGC | 8 cut(s) | 103, 514, 517, 1842, 2310, 2557, 2647, 2845 |
| PleI | GAGTC | 4 cut(s) | 1914, 2725, 2924, 2930 |
| PpsI | GAGTC | 4 cut(s) | 1914, 2725, 2924, 2930 |
| Ppu21I | YACGTR | 1 cut(s) | 536 |
| PscI | ACATGT | 1 cut(s) | 525 |
| PsiI | TTATAA | 2 cut(s) | 1022, 1902 |
| Psp1406I | AACGTT | 1 cut(s) | 1544 |
| Psp6I | CCWGG | 3 cut(s) | 1548, 1913, 2970 |
| PspEI | GGTNACC | 1 cut(s) | 1945 |
| PspFI | CCCAGC | 4 cut(s) | 2245, 2311, 2497, 2582 |
| PspGI | CCWGG | 3 cut(s) | 1548, 1913, 2970 |
| PspN4I | GGNNCC | 5 cut(s) | 380, 1171, 1200, 1342, 2968 |
| PspPI | GGNCC | 3 cut(s) | 1239, 1966, 1971 |
| PstI | CTGCAG | 3 cut(s) | 517, 994, 2650 |
| PstNI | CAGNNNCTG | 2 cut(s) | 404, 2216 |
| PsuI | RGATCY | 9 cut(s) | 121, 332, 355, 378, 905, 1451, 2212, 2662, 2863 |
| PvuII | CAGCTG | 4 cut(s) | 2245, 2311, 2524, 2756 |
| RsaI | GTAC | 8 cut(s) | 694, 893, 1200, 1418, 1979, 2075, 2765, 2913 |
| RsaNI | GTAC | 8 cut(s) | 693, 892, 1199, 1417, 1978, 2074, 2764, 2912 |
| RseI | CAYNNNNRTG | 4 cut(s) | 731, 1593, 2151, 2829 |
| SaqAI | TTAA | 6 cut(s) | 312, 567, 741, 896, 1689, 2634 |
| SatI | GCNGC | 8 cut(s) | 102, 513, 516, 1841, 2309, 2556, 2646, 2844 |
| Sau96I | GGNCC | 3 cut(s) | 1239, 1966, 1971 |
| SchI | GAGTC | 4 cut(s) | 1914, 2726, 2924, 2930 |
| ScrFI | CCNGG | 3 cut(s) | 1550, 1915, 2972 |
| SfaNI | GCATC | 7 cut(s) | 257, 370, 826, 1819, 2182, 2407, 2526 |
| SfcI | CTRYAG | 5 cut(s) | 138, 513, 990, 2208, 2646 |
| Sfr274I | CTCGAG | 1 cut(s) | 2175 |
| SinI | GGWCC | 1 cut(s) | 1966 |
| SlaI | CTCGAG | 1 cut(s) | 2175 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 731, 1593, 2151, 2829 |
| SmlI | CTYRAG | 2 cut(s) | 2175, 2714 |
| SmoI | CTYRAG | 2 cut(s) | 2175, 2714 |
| SphI | GCATGC | 1 cut(s) | 2824 |
| SsiI | CCGC | 8 cut(s) | 101, 226, 246, 260, 316, 1713, 2542, 2844 |
| SspMI | CTAG | 8 cut(s) | 62, 185, 1209, 1436, 1734, 1817, 2277, 2531 |
| StyD4I | CCNGG | 3 cut(s) | 1548, 1913, 2970 |
| StyI | CCWWGG | 4 cut(s) | 34, 374, 435, 555 |
| TaiI | ACGT | 6 cut(s) | 30, 538, 1111, 1144, 1547, 1577 |
| TaqI | TCGA | 2 cut(s) | 1192, 2176 |
| TaqII | GACCGA | 1 cut(s) | 462 |
| TatI | WGTACW | 5 cut(s) | 692, 1416, 1977, 2073, 2911 |
| TauI | GCSGC | 2 cut(s) | 104, 2846 |
| TfiI | GAWTC | 5 cut(s) | 802, 1739, 2171, 2294, 2651 |
| Tru1I | TTAA | 6 cut(s) | 312, 567, 741, 896, 1689, 2634 |
| Tru9I | TTAA | 6 cut(s) | 312, 567, 741, 896, 1689, 2634 |
| TscAI | CASTG | 8 cut(s) | 592, 793, 880, 925, 1801, 2158, 2202, 2734 |
| TseFI | GTSAC | 4 cut(s) | 426, 587, 733, 1945 |
| TseI | GCWGC | 6 cut(s) | 512, 515, 1840, 2308, 2555, 2645 |
| Tsp45I | GTSAC | 4 cut(s) | 426, 587, 733, 1945 |
| TspDTI | ATGAA | 7 cut(s) | 1145, 1266, 1731, 1827, 1949, 2847, 2957 |
| TspRI | CASTG | 8 cut(s) | 592, 793, 880, 925, 1801, 2158, 2202, 2734 |
| VpaK11BI | GGWCC | 1 cut(s) | 1966 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2627 |
| XapI | RAATTY | 6 cut(s) | 482, 823, 1363, 1530, 2118, 2225 |
| XceI | RCATGY | 3 cut(s) | 529, 655, 2824 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 372 |
| XhoI | CTCGAG | 1 cut(s) | 2175 |
| XmiI | GTMKAC | 1 cut(s) | 532 |
| XspI | CTAG | 8 cut(s) | 62, 185, 1209, 1436, 1734, 1817, 2277, 2531 |
| Zsp2I | ATGCAT | 1 cut(s) | 2519 |