Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0008099

Physical Location & Seq

Genomic Coordinates Forward (+)

20529930 .. 20533578

Gene Structure 3649 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G236600.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1164 bp

ATGAACAGCACACACCAAATTTTCAGGCCACTAATTCCTGCCGCCTGTGTCAGTTTCCGGCGGCTGAGCACCTCTAAGCTACTGCCCAGCCCACGTCCCAAAGCTTTGAAACACAGACACTTGTCTCTTCAAACAACCCAAAACTCCAAGTGGGCTGTCAGGCTAAGCTTACTGGACCAAAGCCCGCCAAAATCTAAACCAAAGGTTGACGTGGATCGGTTAGTGGATTTTTTGTACGAGGATCTTGTCCATCTCTTTGATGATCAGGGAATTGATCGGACAGCTTACGATGAGCGTGTGAAGTTCAGGGACCCAATTACGAAGCATGACACGATAACTGGGTACTTGTTGAACATCTCCTTCTTGAAGATTGTGTTCACGCCTAAGTTCCAGTTGCATTGGGTCAAACAGACAGGACCATATGAAATCACCACAAGGTGGACTATGGTTATGAAGTTCATCCCTTTGCCTTGGAAACCAGAATTGGTCTTCACAGGAACCTCAGTTATGGGCATCAACCCGGAGACCGGGAAGTTCTGCAGCCATGTGGACTTCTGGGATTCGATAAAGACGAATGACTATTTTTCAGTAGAAGGTCTGTTGGACGTTTTCAAGCAGCTGCGGTTTTACAAAACTCCAGACTTGGAAACACCCAAATATGAGATATTAAAACGAACGGCGAATTACGAGGTGAGAAAGTACTCCCCTTTTATAGTGGTAGAAGGATCTGTGGACAAGCTGTCTGGGTCGGCCGGTTTCAATGATGTTACTGGGTACATCTTTGGGAAGAACTCCAAAATGGAGAAGATACCAATGACTACCCCTGTCTTCACTGAGGCATCTGATGCTGAATTTTCCAAAGTATCCATCAAAATATGTCTTCCACTGGAGAAGGATATAAGCAGTTTACCAGATCCCAATCAAGAAACAATTAGGTTAAAAAAGGTGGAAGGAGGCACTGCTGCAGTTCTGAAGTTCAGTGGAAAGCCTACTGAAGAGATTGTTCGCGAGAAGGAGAAAGAGTTGCGGTCTAGTCTTATTAGAGATGGTCTCAAACTTAAGAATGGTTGCTTGCTTGCTCGTTACAATGATCCAGGCCGAACTAAGAGCTTTGTAATGAGGAATGAAGTACTGATATGGCTGGAGGAGTTTACATTGGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF2358 SOUL

Protein Analysis

388

Amino Acids

44.47

Weight (kDa)

9.2

Isoelectric Point (pI)

26.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008099)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G20140 AT5G20140
fragaria_vesca	FvH4_1g04030 FvH4_1g04030 FvH4_1g04030
malus_domestica	MD00G1026900.v1.1 MD15G1178700.v1.1
prunus_persica	Prupe.7G236600_v2.0.a1 Prupe.7G236600_v2.0.a1 Prupe.7G236600_v2.0.a1 Prupe.7G236600_v2.0.a1
pyrus_communis	pycom02g03170 pycom15g16060
rosa_chinensis	RchiOBHm_Chr2g0089501
rosa_laevigata	RLG00000016036
rosa_multiflora	Rmu_sc0006193.1_g000010
rosa_roxburghii	Rroxscaffold_2G00151870
rosa_rugosa	Rorug02G0001200 Rorug02G0001200 Rorug02G0001300
rosa_samantha	Rh2BG045200 Rh2CG047000 Rh2DG046600
rosa_wichuraiana	Rw2G003600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	438
AccII	CGCG	1 cut(s)	1008
AciI	CCGC	5 cut(s)	42, 61, 185, 622, 1027
AclWI	GGATC	5 cut(s)	222, 249, 733, 908, 1085
AcoI	YGGCCR	1 cut(s)	750
AcsI	RAATTY	2 cut(s)	18, 851
AcuI	CTGAAG	2 cut(s)	992, 1014
AdeI	CACNNNGTG	1 cut(s)	438
AfaI	GTAC	5 cut(s)	236, 344, 701, 776, 1131
AfiI	CCNNNNNNNGG	2 cut(s)	438, 527
AflII	CTTAAG	1 cut(s)	1058
AgsI	TTSAA	6 cut(s)	109, 131, 352, 367, 613, 760
AhdI	GACNNNNNGTC	1 cut(s)	739
AjiI	CACGTC	2 cut(s)	95, 211
AjnI	CCWGG	1 cut(s)	1093
AjuI	GAANNNNNNNTTGG	2 cut(s)	467, 499
AluBI	AGCT	7 cut(s)	79, 104, 168, 284, 619, 739, 1110
AluI	AGCT	7 cut(s)	79, 104, 168, 284, 619, 739, 1110
Alw21I	GWGCWC	1 cut(s)	71
Alw26I	GTCTC	3 cut(s)	129, 518, 1055
AlwI	GGATC	5 cut(s)	222, 249, 733, 908, 1085
AoxI	GGCC	3 cut(s)	26, 750, 1096
ApeKI	GCWGC	4 cut(s)	540, 616, 619, 962
ApoI	RAATTY	2 cut(s)	18, 851
AspS9I	GGNCC	3 cut(s)	175, 310, 416
AsuC2I	CCSGG	2 cut(s)	521, 529
AsuHPI	GGTGA	2 cut(s)	421, 703
AvaII	GGWCC	3 cut(s)	175, 310, 416
BbsI	GAAGAC	3 cut(s)	481, 820, 872
Bbv12I	GWGCWC	1 cut(s)	71
BbvI	GCAGC	4 cut(s)	552, 606, 628, 949
BccI	CCATC	3 cut(s)	258, 875, 1040
BceAI	ACGGC	1 cut(s)	693
BciT130I	CCWGG	1 cut(s)	1095
BciVI	GTATCC	1 cut(s)	874
BclI	TGATCA	1 cut(s)	262
BcnI	CCSGG	2 cut(s)	521, 529
BcoDI	GTCTC	3 cut(s)	129, 518, 1055
BfaI	CTAG	2 cut(s)	1032, 1162
BfmI	CTRYAG	2 cut(s)	538, 963
BfrI	CTTAAG	1 cut(s)	1058
BfuI	GTATCC	1 cut(s)	874
BisI	GCNGC	6 cut(s)	42, 62, 541, 617, 620, 963
BlpI	GCTNAGC	2 cut(s)	65, 164
BlsI	GCNGC	6 cut(s)	43, 63, 542, 618, 621, 964
BmcAI	AGTACT	2 cut(s)	701, 1131
Bme1390I	CCNGG	3 cut(s)	521, 529, 1095
Bme18I	GGWCC	3 cut(s)	175, 310, 416
BmeRI	GACNNNNNGTC	1 cut(s)	739
BmgBI	CACGTC	2 cut(s)	95, 211
BmgT120I	GGNCC	3 cut(s)	175, 310, 416
BmiI	GGNNCC	3 cut(s)	311, 312, 499
BmrFI	CCNGG	3 cut(s)	521, 529, 1095
BmrI	ACTGGG	2 cut(s)	348, 780
BmsI	GCATC	3 cut(s)	522, 835, 848
BmuI	ACTGGG	2 cut(s)	348, 780
BoxI	GACNNNNGTC	1 cut(s)	121
BpiI	GAAGAC	3 cut(s)	481, 820, 872
BplI	GAGNNNNNCTC	2 cut(s)	1035, 1067
BpmI	CTGGAG	3 cut(s)	621, 908, 1163
Bpu1102I	GCTNAGC	2 cut(s)	65, 164
BpuMI	CCSGG	2 cut(s)	521, 529
BsaBI	GATNNNNATC	1 cut(s)	918
BsaI	GGTCTC	2 cut(s)	518, 1055
BsaJI	CCNNGG	1 cut(s)	470
BsaXI	ACNNNNNCTCC	2 cut(s)	1007, 1037
Bsc4I	CCNNNNNNNGG	2 cut(s)	438, 527
Bse118I	RCCGGY	1 cut(s)	752
Bse1I	ACTGG	5 cut(s)	177, 343, 391, 775, 891
Bse8I	GATNNNNATC	1 cut(s)	918
BseBI	CCWGG	1 cut(s)	1095
BseDI	CCNNGG	1 cut(s)	470
BseGI	GGATG	1 cut(s)	459
BseJI	GATNNNNATC	1 cut(s)	918
BseLI	CCNNNNNNNGG	2 cut(s)	438, 527
BseMII	CTCAG	3 cut(s)	56, 516, 825
BseNI	ACTGG	5 cut(s)	177, 343, 391, 775, 891
BseRI	GAGGAG	1 cut(s)	1160
BseX3I	CGGCCG	1 cut(s)	750
BseXI	GCAGC	4 cut(s)	552, 606, 628, 949
BseYI	CCCAGC	1 cut(s)	86
Bsh1236I	CGCG	1 cut(s)	1008
Bsh1285I	CGRYCG	1 cut(s)	753
BshFI	GGCC	3 cut(s)	28, 752, 1098
BsiEI	CGRYCG	1 cut(s)	753
BsiHKAI	GWGCWC	1 cut(s)	71
BsiSI	CCGG	4 cut(s)	58, 521, 528, 753
BslFI	GGGAC	2 cut(s)	81, 323
BslI	CCNNNNNNNGG	2 cut(s)	438, 527
BsmAI	GTCTC	3 cut(s)	129, 518, 1055
BsmFI	GGGAC	2 cut(s)	81, 323
BsnI	GGCC	3 cut(s)	28, 752, 1098
Bso31I	GGTCTC	2 cut(s)	518, 1055
Bsp1286I	GDGCHC	1 cut(s)	71
Bsp143I	GATC	7 cut(s)	214, 241, 262, 274, 725, 913, 1090
Bsp1720I	GCTNAGC	2 cut(s)	65, 164
Bsp68I	TCGCGA	1 cut(s)	1008
BspACI	CCGC	5 cut(s)	42, 61, 185, 622, 1027
BspANI	GGCC	3 cut(s)	28, 752, 1098
BspCNI	CTCAG	3 cut(s)	57, 515, 826
BspFNI	CGCG	1 cut(s)	1008
BspLI	GGNNCC	3 cut(s)	311, 312, 499
BspMAI	CTGCAG	2 cut(s)	542, 967
BspPI	GGATC	5 cut(s)	222, 249, 733, 908, 1085
BspTI	CTTAAG	1 cut(s)	1058
BspTNI	GGTCTC	2 cut(s)	518, 1055
BsrFI	RCCGGY	1 cut(s)	752
BsrI	ACTGG	5 cut(s)	177, 343, 391, 775, 891
BssAI	RCCGGY	1 cut(s)	752
BssECI	CCNNGG	1 cut(s)	470
BssMI	GATC	7 cut(s)	214, 241, 262, 274, 725, 913, 1090
BssT1I	CCWWGG	1 cut(s)	470
Bst2UI	CCWGG	1 cut(s)	1095
Bst6I	CTCTTC	2 cut(s)	132, 990
BstAFI	CTTAAG	1 cut(s)	1058
BstAPI	GCANNNNNTGC	1 cut(s)	845
BstC8I	GCNNGC	3 cut(s)	185, 1073, 1077
BstDEI	CTNAG	7 cut(s)	65, 75, 164, 384, 502, 834, 1104
BstF5I	GGATG	1 cut(s)	459
BstFNI	CGCG	1 cut(s)	1008
BstKTI	GATC	7 cut(s)	217, 244, 265, 277, 728, 916, 1093
BstMAI	GTCTC	3 cut(s)	129, 518, 1055
BstMBI	GATC	7 cut(s)	214, 241, 262, 274, 725, 913, 1090
BstMCI	CGRYCG	1 cut(s)	753
BstMWI	GCNNNNNNNGC	1 cut(s)	845
BstNI	CCWGG	1 cut(s)	1095
BstPAI	GACNNNNGTC	1 cut(s)	121
BstSCI	CCNGG	3 cut(s)	519, 527, 1093
BstSFI	CTRYAG	2 cut(s)	538, 963
BstUI	CGCG	1 cut(s)	1008
BstV1I	GCAGC	4 cut(s)	552, 606, 628, 949
BstV2I	GAAGAC	3 cut(s)	481, 820, 872
BstX2I	RGATCY	3 cut(s)	241, 725, 913
BstYI	RGATCY	3 cut(s)	241, 725, 913
BstZI	CGGCCG	1 cut(s)	750
BsuI	GTATCC	1 cut(s)	874
BsuRI	GGCC	3 cut(s)	28, 752, 1098
BtrI	CACGTC	2 cut(s)	95, 211
BtsCI	GGATG	1 cut(s)	459
BtsI	GCAGTG	1 cut(s)	957
BtsIMutI	CAGTG	4 cut(s)	831, 884, 957, 985
BtuMI	TCGCGA	1 cut(s)	1008
Cac8I	GCNNGC	3 cut(s)	185, 1073, 1077
Cfr10I	RCCGGY	1 cut(s)	752
Cfr13I	GGNCC	3 cut(s)	175, 310, 416
Csp6I	GTAC	5 cut(s)	235, 343, 700, 775, 1130
CviAII	CATG	2 cut(s)	326, 545
CviQI	GTAC	5 cut(s)	235, 343, 700, 775, 1130
DdeI	CTNAG	7 cut(s)	65, 75, 164, 384, 502, 834, 1104
DpnI	GATC	7 cut(s)	216, 243, 264, 276, 727, 915, 1092
DpnII	GATC	7 cut(s)	214, 241, 262, 274, 725, 913, 1090
DraIII	CACNNNGTG	1 cut(s)	438
DriI	GACNNNNNGTC	1 cut(s)	739
EaeI	YGGCCR	1 cut(s)	750
EagI	CGGCCG	1 cut(s)	750
Eam1104I	CTCTTC	2 cut(s)	132, 990
Eam1105I	GACNNNNNGTC	1 cut(s)	739
EarI	CTCTTC	2 cut(s)	132, 990
EclXI	CGGCCG	1 cut(s)	750
Eco130I	CCWWGG	1 cut(s)	470
Eco31I	GGTCTC	2 cut(s)	518, 1055
Eco47I	GGWCC	3 cut(s)	175, 310, 416
Eco52I	CGGCCG	1 cut(s)	750
Eco57I	CTGAAG	2 cut(s)	992, 1014
EcoO109I	RGGNCCY	1 cut(s)	310
EcoRII	CCWGG	1 cut(s)	1093
EcoT14I	CCWWGG	1 cut(s)	470
ErhI	CCWWGG	1 cut(s)	470
FaeI	CATG	2 cut(s)	329, 548
FaqI	GGGAC	2 cut(s)	81, 323
FatI	CATG	2 cut(s)	325, 544
FauI	CCCGC	1 cut(s)	192
FauNDI	CATATG	1 cut(s)	421
FbaI	TGATCA	1 cut(s)	262
Fnu4HI	GCNGC	6 cut(s)	42, 62, 541, 617, 620, 963
FokI	GGATG	1 cut(s)	446
Fsp4HI	GCNGC	6 cut(s)	42, 62, 541, 617, 620, 963
FspBI	CTAG	2 cut(s)	1032, 1162
GluI	GCNGC	6 cut(s)	42, 62, 541, 617, 620, 963
GsaI	CCCAGC	1 cut(s)	90
GsuI	CTGGAG	3 cut(s)	621, 908, 1163
HaeIII	GGCC	3 cut(s)	28, 752, 1098
HapII	CCGG	4 cut(s)	58, 521, 528, 753
Hin1II	CATG	2 cut(s)	329, 548
HincII	GTYRAC	1 cut(s)	208
HindII	GTYRAC	1 cut(s)	208
HindIII	AAGCTT	2 cut(s)	102, 166
HinfI	GANTC	1 cut(s)	560
HpaII	CCGG	4 cut(s)	58, 521, 528, 753
HphI	GGTGA	2 cut(s)	421, 703
Hpy166II	GTNNAC	7 cut(s)	208, 378, 441, 550, 733, 908, 1152
Hpy188I	TCNGA	3 cut(s)	279, 844, 972
Hpy188III	TCNNGA	4 cut(s)	364, 638, 923, 1007
Hpy8I	GTNNAC	7 cut(s)	208, 378, 441, 550, 733, 908, 1152
HpyAV	CCTTC	6 cut(s)	370, 587, 716, 886, 944, 1006
HpyCH4IV	ACGT	3 cut(s)	94, 210, 606
HpyCH4V	TGCA	3 cut(s)	397, 540, 965
HpyF10VI	GCNNNNNNNGC	1 cut(s)	845
HpyF3I	CTNAG	7 cut(s)	65, 75, 164, 384, 502, 834, 1104
HpySE526I	ACGT	3 cut(s)	94, 210, 606
Hsp92II	CATG	2 cut(s)	329, 548
KflI	GGGWCCC	1 cut(s)	310
Ksp22I	TGATCA	1 cut(s)	262
Kzo9I	GATC	7 cut(s)	214, 241, 262, 274, 725, 913, 1090
Lsp1109I	GCAGC	4 cut(s)	552, 606, 628, 949
LweI	GCATC	3 cut(s)	522, 835, 848
MaeI	CTAG	2 cut(s)	1032, 1162
MaeII	ACGT	3 cut(s)	94, 210, 606
MaeIII	GTNAC	2 cut(s)	766, 1082
MalI	GATC	7 cut(s)	216, 243, 264, 276, 727, 915, 1092
MboI	GATC	7 cut(s)	214, 241, 262, 274, 725, 913, 1090
MboII	GAAGA	8 cut(s)	119, 379, 481, 799, 817, 820, 872, 1007
MflI	RGATCY	3 cut(s)	241, 725, 913
MhlI	GDGCHC	1 cut(s)	71
MluCI	AATT	8 cut(s)	18, 33, 270, 315, 482, 682, 851, 930
MmeI	TCCRAC	1 cut(s)	582
MnlI	CCTC	8 cut(s)	82, 232, 511, 682, 829, 947, 1113, 1138
MseI	TTAA	3 cut(s)	668, 938, 1059
MspA1I	CMGCKG	1 cut(s)	619
MspCI	CTTAAG	1 cut(s)	1058
MspI	CCGG	4 cut(s)	58, 521, 528, 753
MspR9I	CCNGG	3 cut(s)	521, 529, 1095
MvaI	CCWGG	1 cut(s)	1095
MvnI	CGCG	1 cut(s)	1008
MwoI	GCNNNNNNNGC	1 cut(s)	845
NciI	CCSGG	2 cut(s)	521, 529
NdeI	CATATG	1 cut(s)	421
NdeII	GATC	7 cut(s)	214, 241, 262, 274, 725, 913, 1090
NlaIII	CATG	2 cut(s)	329, 548
NlaIV	GGNNCC	3 cut(s)	311, 312, 499
NruI	TCGCGA	1 cut(s)	1008
PcsI	WCGNNNNNNNCGW	1 cut(s)	569
PfeI	GAWTC	1 cut(s)	560
PflMI	CCANNNNNTGG	1 cut(s)	438
PkrI	GCNGC	6 cut(s)	43, 63, 542, 618, 621, 964
PpuMI	RGGWCCY	1 cut(s)	310
PshAI	GACNNNNGTC	1 cut(s)	121
Psp5II	RGGWCCY	1 cut(s)	310
Psp6I	CCWGG	1 cut(s)	1093
PspFI	CCCAGC	1 cut(s)	86
PspGI	CCWGG	1 cut(s)	1093
PspN4I	GGNNCC	3 cut(s)	311, 312, 499
PspPI	GGNCC	3 cut(s)	175, 310, 416
PspPPI	RGGWCCY	1 cut(s)	310
PstI	CTGCAG	2 cut(s)	542, 967
PsuI	RGATCY	3 cut(s)	241, 725, 913
PvuII	CAGCTG	1 cut(s)	619
RruI	TCGCGA	1 cut(s)	1008
RsaI	GTAC	5 cut(s)	236, 344, 701, 776, 1131
RsaNI	GTAC	5 cut(s)	235, 343, 700, 775, 1130
SaqAI	TTAA	3 cut(s)	668, 938, 1059
SatI	GCNGC	6 cut(s)	42, 62, 541, 617, 620, 963
Sau3AI	GATC	7 cut(s)	214, 241, 262, 274, 725, 913, 1090
Sau96I	GGNCC	3 cut(s)	175, 310, 416
ScaI	AGTACT	2 cut(s)	701, 1131
ScrFI	CCNGG	3 cut(s)	521, 529, 1095
SduI	GDGCHC	1 cut(s)	71
SfaNI	GCATC	3 cut(s)	522, 835, 848
SfcI	CTRYAG	2 cut(s)	538, 963
SinI	GGWCC	3 cut(s)	175, 310, 416
SmlI	CTYRAG	1 cut(s)	1058
SmoI	CTYRAG	1 cut(s)	1058
Sse9I	AATT	8 cut(s)	18, 33, 270, 315, 482, 682, 851, 930
SsiI	CCGC	5 cut(s)	42, 61, 185, 622, 1027
SspMI	CTAG	2 cut(s)	1032, 1162
StyD4I	CCNGG	3 cut(s)	519, 527, 1093
StyI	CCWWGG	1 cut(s)	470
TaiI	ACGT	3 cut(s)	97, 213, 609
TaqI	TCGA	1 cut(s)	563
TasI	AATT	8 cut(s)	18, 33, 270, 315, 482, 682, 851, 930
TatI	WGTACW	2 cut(s)	699, 1129
TauI	GCSGC	2 cut(s)	44, 64
TfiI	GAWTC	1 cut(s)	560
Tru1I	TTAA	3 cut(s)	668, 938, 1059
Tru9I	TTAA	3 cut(s)	668, 938, 1059
TscAI	CASTG	4 cut(s)	838, 891, 964, 985
TseI	GCWGC	4 cut(s)	540, 616, 619, 962
TspDTI	ATGAA	5 cut(s)	17, 438, 448, 467, 1140
TspRI	CASTG	4 cut(s)	838, 891, 964, 985
Van91I	CCANNNNNTGG	1 cut(s)	438
Vha464I	CTTAAG	1 cut(s)	1058
VpaK11BI	GGWCC	3 cut(s)	175, 310, 416
XapI	RAATTY	2 cut(s)	18, 851
XspI	CTAG	2 cut(s)	1032, 1162
ZrmI	AGTACT	2 cut(s)	701, 1131

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.