Prupe.8G002500_v2.0.a1

No apical meristem (NAM) protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
228506 .. 230784
2279 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G002500.1

Sequence Viewer

Length: 1137 bp
ATGGCTAATTCATCGACTGGGGGTGTGCCTCCAGGGTTTCGATTCCATCCGACAGACGAAGAGCTGCTTCACTACTATTTGAAGAAGAAGGTCTCGTTTCAGAAGTTTGACATGGAGGTGATTAGAGAGGTGGACTTGAATAAGATGGAACCTTGGGAGTTGCAAGAGAGATGTAGGATCGGATCGACACCACAAAATGAGTGGTACTTTTTCAGCCACAAGGACAGGAAGTACCCAACAGGTTCTCGGACAAATAGGGCTACAAATGCTGGGTTTTGGAAGGCAACAGGGCGGGACAAGTGCATCCGAAACACCTTCAAGAAGATTGGCATGAGAAAAACCCTTGTTTTCTACAGAGGGAGAGCTCCCCATGGCCAAAAGACCGACTGGATTATGCATGAGTATCGCCTTGAAGATGGTGATGATCCTCAAGGAAACTTATCTAGTGAAGATGGGTGGGTGATCTGCAGGGTATTCAAGAAGAAGAACTTATTCAAGGTTGGGAATGAAGGGGGAAGCTCGAGCATGAACTCATCGGATCATCAACAGCTCAACAACACATCAAGCACCAACCAAGCTCGCTCCTTCATGCATACCCACAGAGACAATGAATACTTACTACGCCAACAACACAGTCAAGCCTTCGAACTAAACAACCCAGGCCTTCACTACGCCCACCTCCAGCCACCCCCTCAGTACTCTCTTTTCCAACCCCAAGCCCTAATCCCAACCCACAAGCCCATCGCCGGCTACGACTACACTCAGCTCCCTTCCGACGACTCCCCGGGCCACGGCATGGTGAAGCAGCTCATGACAAACCCTAGAGACTGTGAGAGTGGCAGTGAGAGCCTCCGGTACCAAGCGTGTGAGCCGGGGTTGGAAGTTGGGACGTGCGAACCAAATCAAGCACCAATGGTTGCAGGAGGAGGTGGAAGAGATCATCATGATCAGGGTGGCATGAATGAATGGGGGATGCTGGACCGCCTTGTTACGTCTCATCTCGGAAATGATCAAGACTCGTCGTCGAAAGGAGCAAGATATGATCAGAATGCAAATGCTGCTGCATCCTCCGTCACCCAAATTAATAACCACCTGTCTTTGCGTGGAGAGATGGATTTTTGGGGGTATGGAAAATAG

Protein Analysis

379

Amino Acids

42.9

Weight (kDa)

7.29

Isoelectric Point (pI)

37.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014489)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G10350 AT4G10350
fragaria_vesca FvH4_2g00240
malus_domestica MD05G1005600.v1.1 MD10G1000900.v1.1
prunus_persica Prupe.8G002500_v2.0.a1
pyrus_communis pycom05g00070
rosa_chinensis RchiOBHm_Chr6g0249541
rosa_laevigata RLG00000015571
rosa_multiflora Rmu_ssc0000407.1_g000012
rosa_roxburghii Rroxscaffold_7G00217580
rosa_rugosa Rorug05G0493400
rosa_samantha Rh6AG003100 Rh6BG007000 Rh6CG002100 Rh6DG002100
rosa_wichuraiana Rw6G000360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 855
AccB1I GGYRCC 1 cut(s) 855
AccB7I CCANNNNNTGG 1 cut(s) 796
AciI CCGC 2 cut(s) 292, 982
AclWI GGATC 4 cut(s) 185, 190, 419, 546
AcoI YGGCCR 1 cut(s) 373
AfaI GTAC 4 cut(s) 206, 233, 698, 857
AfiI CCNNNNNNNGG 3 cut(s) 746, 791, 796
AgsI TTSAA 6 cut(s) 82, 139, 319, 413, 478, 496
AhdI GACNNNNNGTC 1 cut(s) 1021
AjiI CACGTC 1 cut(s) 891
AjnI CCWGG 2 cut(s) 31, 658
AluBI AGCT 7 cut(s) 64, 365, 519, 550, 578, 766, 808
AluI AGCT 7 cut(s) 64, 365, 519, 550, 578, 766, 808
Alw21I GWGCWC 1 cut(s) 367
Alw26I GTCTC 4 cut(s) 97, 597, 819, 999
AlwI GGATC 4 cut(s) 185, 190, 419, 546
Ama87I CYCGRG 2 cut(s) 520, 784
AoxI GGCC 3 cut(s) 373, 661, 787
ApeKI GCWGC 4 cut(s) 64, 805, 1058, 1061
AseI ATTAAT 1 cut(s) 1083
Asp700I GAANNNNTTC 1 cut(s) 491
Asp718I GGTACC 1 cut(s) 855
AspS9I GGNCC 2 cut(s) 787, 979
AsuC2I CCSGG 3 cut(s) 785, 786, 873
AsuHPI GGTGA 5 cut(s) 130, 431, 472, 811, 1066
AsuII TTCGAA 1 cut(s) 645
AvaI CYCGRG 2 cut(s) 520, 784
AvaII GGWCC 1 cut(s) 979
BalI TGGCCA 1 cut(s) 375
BanI GGYRCC 1 cut(s) 855
BanII GRGCYC 1 cut(s) 367
Bbv12I GWGCWC 1 cut(s) 367
BbvI GCAGC 4 cut(s) 51, 817, 1045, 1048
BccI CCATC 6 cut(s) 54, 139, 410, 446, 749, 1105
BceAI ACGGC 1 cut(s) 808
BcgI CGANNNNNNTGC 2 cut(s) 386, 420
BciT130I CCWGG 2 cut(s) 33, 660
BclI TGATCA 3 cut(s) 946, 1009, 1042
BcnI CCSGG 3 cut(s) 785, 786, 873
BcoDI GTCTC 4 cut(s) 97, 597, 819, 999
BfaI CTAG 2 cut(s) 444, 822
BfmI CTRYAG 2 cut(s) 352, 466
BisI GCNGC 4 cut(s) 65, 806, 1059, 1062
BlsI GCNGC 4 cut(s) 66, 807, 1060, 1063
BmcAI AGTACT 1 cut(s) 698
Bme1390I CCNGG 5 cut(s) 33, 660, 785, 786, 873
Bme18I GGWCC 1 cut(s) 979
BmeRI GACNNNNNGTC 1 cut(s) 1021
BmeT110I CYCGRG 2 cut(s) 520, 784
BmgBI CACGTC 1 cut(s) 891
BmgT120I GGNCC 2 cut(s) 787, 979
BmiI GGNNCC 2 cut(s) 150, 857
BmrFI CCNGG 5 cut(s) 33, 660, 785, 786, 873
BmrI ACTGGG 1 cut(s) 27
BmsI GCATC 3 cut(s) 312, 963, 1073
BmuI ACTGGG 1 cut(s) 27
BpmI CTGGAG 2 cut(s) 15, 665
Bpu14I TTCGAA 1 cut(s) 645
BpuEI CTTGAG 1 cut(s) 414
BpuMI CCSGG 3 cut(s) 785, 786, 873
BsaI GGTCTC 1 cut(s) 97
BsaJI CCNNGG 8 cut(s) 32, 152, 370, 658, 783, 784, 790, 872
BsaWI WCCGGW 1 cut(s) 852
Bsc4I CCNNNNNNNGG 3 cut(s) 746, 791, 796
Bse118I RCCGGY 1 cut(s) 746
Bse1I ACTGG 2 cut(s) 22, 392
BseBI CCWGG 2 cut(s) 33, 660
BseDI CCNNGG 8 cut(s) 32, 152, 370, 658, 783, 784, 790, 872
BseGI GGATG 4 cut(s) 46, 303, 978, 1064
BseLI CCNNNNNNNGG 3 cut(s) 746, 791, 796
BseMII CTCAG 2 cut(s) 707, 776
BseNI ACTGG 2 cut(s) 22, 392
BseRI GAGGAG 1 cut(s) 939
BseXI GCAGC 4 cut(s) 51, 817, 1045, 1048
BseYI CCCAGC 1 cut(s) 269
BshFI GGCC 3 cut(s) 375, 663, 789
BshNI GGYRCC 1 cut(s) 855
BsiHKAI GWGCWC 1 cut(s) 367
BsiHKCI CYCGRG 2 cut(s) 520, 784
BsiSI CCGG 4 cut(s) 747, 785, 853, 872
BslFI GGGAC 2 cut(s) 308, 901
BslI CCNNNNNNNGG 3 cut(s) 746, 791, 796
BsmAI GTCTC 4 cut(s) 97, 597, 819, 999
BsmBI CGTCTC 1 cut(s) 999
BsmFI GGGAC 2 cut(s) 308, 901
BsmI GAATGC 1 cut(s) 1054
BsnI GGCC 3 cut(s) 375, 663, 789
Bso31I GGTCTC 1 cut(s) 97
BsoBI CYCGRG 2 cut(s) 520, 784
Bsp119I TTCGAA 1 cut(s) 645
Bsp1286I GDGCHC 1 cut(s) 367
Bsp143I GATC 9 cut(s) 177, 182, 424, 462, 538, 937, 946, 1009, 1042
Bsp19I CCATGG 1 cut(s) 370
BspACI CCGC 2 cut(s) 292, 982
BspANI GGCC 3 cut(s) 375, 663, 789
BspCNI CTCAG 2 cut(s) 706, 775
BspHI TCATGA 2 cut(s) 810, 943
BspLI GGNNCC 2 cut(s) 150, 857
BspMAI CTGCAG 1 cut(s) 470
BspPI GGATC 4 cut(s) 185, 190, 419, 546
BspQI GCTCTTC 1 cut(s) 54
BspT104I TTCGAA 1 cut(s) 645
BspT107I GGYRCC 1 cut(s) 855
BspTNI GGTCTC 1 cut(s) 97
BsrFI RCCGGY 1 cut(s) 746
BsrI ACTGG 2 cut(s) 22, 392
BssAI RCCGGY 1 cut(s) 746
BssECI CCNNGG 8 cut(s) 32, 152, 370, 658, 783, 784, 790, 872
BssMI GATC 9 cut(s) 177, 182, 424, 462, 538, 937, 946, 1009, 1042
BssT1I CCWWGG 2 cut(s) 152, 370
Bst2UI CCWGG 2 cut(s) 33, 660
Bst4CI ACNGT 2 cut(s) 635, 830
Bst6I CTCTTC 2 cut(s) 54, 928
BstAPI GCANNNNNTGC 1 cut(s) 1058
BstBI TTCGAA 1 cut(s) 645
BstC8I GCNNGC 2 cut(s) 580, 748
BstDEI CTNAG 2 cut(s) 693, 762
BstDSI CCRYGG 2 cut(s) 370, 790
BstF5I GGATG 4 cut(s) 46, 303, 978, 1064
BstKTI GATC 9 cut(s) 180, 185, 427, 465, 541, 940, 949, 1012, 1045
BstMAI GTCTC 4 cut(s) 97, 597, 819, 999
BstMBI GATC 9 cut(s) 177, 182, 424, 462, 538, 937, 946, 1009, 1042
BstMWI GCNNNNNNNGC 3 cut(s) 266, 846, 1058
BstNI CCWGG 2 cut(s) 33, 660
BstSCI CCNGG 5 cut(s) 31, 658, 783, 784, 871
BstSFI CTRYAG 2 cut(s) 352, 466
BstV1I GCAGC 4 cut(s) 51, 817, 1045, 1048
BsuRI GGCC 3 cut(s) 375, 663, 789
BtgI CCRYGG 2 cut(s) 370, 790
BtgZI GCGATG 1 cut(s) 727
BtrI CACGTC 1 cut(s) 891
BtsCI GGATG 4 cut(s) 46, 303, 978, 1064
BtsI GCAGTG 1 cut(s) 847
BtsIMutI CAGTG 1 cut(s) 847
Cac8I GCNNGC 2 cut(s) 580, 748
CciI TCATGA 2 cut(s) 810, 943
Cfr10I RCCGGY 1 cut(s) 746
Cfr13I GGNCC 2 cut(s) 787, 979
Cfr9I CCCGGG 1 cut(s) 784
Csp6I GTAC 4 cut(s) 205, 232, 697, 856
CspCI CAANNNNNGTGG 2 cut(s) 182, 217
CviQI GTAC 4 cut(s) 205, 232, 697, 856
DdeI CTNAG 2 cut(s) 693, 762
DpnI GATC 9 cut(s) 179, 184, 426, 464, 540, 939, 948, 1011, 1044
DpnII GATC 9 cut(s) 177, 182, 424, 462, 538, 937, 946, 1009, 1042
DriI GACNNNNNGTC 1 cut(s) 1021
EaeI YGGCCR 1 cut(s) 373
Eam1104I CTCTTC 2 cut(s) 54, 928
Eam1105I GACNNNNNGTC 1 cut(s) 1021
EarI CTCTTC 2 cut(s) 54, 928
Ecl136II GAGCTC 1 cut(s) 365
Eco130I CCWWGG 2 cut(s) 152, 370
Eco147I AGGCCT 1 cut(s) 663
Eco24I GRGCYC 1 cut(s) 367
Eco31I GGTCTC 1 cut(s) 97
Eco47I GGWCC 1 cut(s) 979
Eco53kI GAGCTC 1 cut(s) 365
Eco88I CYCGRG 2 cut(s) 520, 784
EcoICRI GAGCTC 1 cut(s) 365
EcoRII CCWGG 2 cut(s) 31, 658
EcoT14I CCWWGG 2 cut(s) 152, 370
EcoT22I ATGCAT 2 cut(s) 399, 594
EcoT38I GRGCYC 1 cut(s) 367
ErhI CCWWGG 2 cut(s) 152, 370
Esp3I CGTCTC 1 cut(s) 999
FalI AAGNNNNNCTT 4 cut(s) 51, 83, 473, 505
FaqI GGGAC 2 cut(s) 308, 901
FauI CCCGC 1 cut(s) 285
FbaI TGATCA 3 cut(s) 946, 1009, 1042
Fnu4HI GCNGC 4 cut(s) 65, 806, 1059, 1062
FokI GGATG 4 cut(s) 33, 290, 985, 1051
FriOI GRGCYC 1 cut(s) 367
Fsp4HI GCNGC 4 cut(s) 65, 806, 1059, 1062
FspBI CTAG 2 cut(s) 444, 822
GluI GCNGC 4 cut(s) 65, 806, 1059, 1062
GsaI CCCAGC 1 cut(s) 273
GsuI CTGGAG 2 cut(s) 15, 665
HaeIII GGCC 3 cut(s) 375, 663, 789
HapII CCGG 4 cut(s) 747, 785, 853, 872
HinfI GANTC 3 cut(s) 42, 779, 1016
HpaII CCGG 4 cut(s) 747, 785, 853, 872
HphI GGTGA 5 cut(s) 130, 431, 472, 811, 1066
Hpy166II GTNNAC 1 cut(s) 133
Hpy188I TCNGA 9 cut(s) 51, 102, 182, 249, 308, 538, 775, 1004, 1047
Hpy188III TCNNGA 5 cut(s) 319, 478, 811, 944, 1013
Hpy8I GTNNAC 1 cut(s) 133
Hpy99I CGWCG 3 cut(s) 779, 1024, 1027
HpyAV CCTTC 8 cut(s) 82, 274, 325, 503, 595, 652, 674, 780
HpyCH4III ACNGT 2 cut(s) 635, 830
HpyCH4IV ACGT 2 cut(s) 890, 992
HpyCH4V TGCA 8 cut(s) 163, 303, 397, 468, 592, 920, 1052, 1064
HpyF10VI GCNNNNNNNGC 3 cut(s) 266, 846, 1058
HpyF3I CTNAG 2 cut(s) 693, 762
HpySE526I ACGT 2 cut(s) 890, 992
KpnI GGTACC 1 cut(s) 859
KroI GCCGGC 1 cut(s) 746
KroNI GCCGGC 1 cut(s) 748
Ksp22I TGATCA 3 cut(s) 946, 1009, 1042
Kzo9I GATC 9 cut(s) 177, 182, 424, 462, 538, 937, 946, 1009, 1042
LguI GCTCTTC 1 cut(s) 54
LmnI GCTCC 4 cut(s) 370, 587, 771, 1031
Lsp1109I GCAGC 4 cut(s) 51, 817, 1045, 1048
LweI GCATC 3 cut(s) 312, 963, 1073
MaeI CTAG 2 cut(s) 444, 822
MaeII ACGT 2 cut(s) 890, 992
MaeIII GTNAC 2 cut(s) 988, 1072
MalI GATC 9 cut(s) 179, 184, 426, 464, 540, 939, 948, 1011, 1044
MboI GATC 9 cut(s) 177, 182, 424, 462, 538, 937, 946, 1009, 1042
MboII GAAGA 9 cut(s) 71, 94, 97, 334, 425, 461, 493, 496, 945
MhlI GDGCHC 1 cut(s) 367
MlsI TGGCCA 1 cut(s) 375
MluCI AATT 2 cut(s) 7, 1080
MluNI TGGCCA 1 cut(s) 375
MlyI GAGTC 2 cut(s) 773, 1010
MmeI TCCRAC 4 cut(s) 74, 733, 798, 858
Mox20I TGGCCA 1 cut(s) 375
Mph1103I ATGCAT 2 cut(s) 399, 594
MroNI GCCGGC 1 cut(s) 746
MroXI GAANNNNTTC 1 cut(s) 491
MscI TGGCCA 1 cut(s) 375
MseI TTAA 1 cut(s) 1083
MslI CAYNNNNRTG 1 cut(s) 116
Msp20I TGGCCA 1 cut(s) 375
MspI CCGG 4 cut(s) 747, 785, 853, 872
MspR9I CCNGG 5 cut(s) 33, 660, 785, 786, 873
Mva1269I GAATGC 1 cut(s) 1054
MvaI CCWGG 2 cut(s) 33, 660
MwoI GCNNNNNNNGC 3 cut(s) 266, 846, 1058
NaeI GCCGGC 1 cut(s) 748
NciI CCSGG 3 cut(s) 785, 786, 873
NcoI CCATGG 1 cut(s) 370
NdeII GATC 9 cut(s) 177, 182, 424, 462, 538, 937, 946, 1009, 1042
NgoMIV GCCGGC 1 cut(s) 746
NlaIV GGNNCC 2 cut(s) 150, 857
NmuCI GTSAC 1 cut(s) 1072
NsiI ATGCAT 2 cut(s) 399, 594
NspV TTCGAA 1 cut(s) 645
PaeR7I CTCGAG 1 cut(s) 520
PagI TCATGA 2 cut(s) 810, 943
PceI AGGCCT 1 cut(s) 663
PciSI GCTCTTC 1 cut(s) 54
PcsI WCGNNNNNNNCGW 1 cut(s) 750
PctI GAATGC 1 cut(s) 1054
PdiI GCCGGC 1 cut(s) 748
PdmI GAANNNNTTC 1 cut(s) 491
PfeI GAWTC 1 cut(s) 42
PflMI CCANNNNNTGG 1 cut(s) 796
PkrI GCNGC 4 cut(s) 66, 807, 1060, 1063
PleI GAGTC 2 cut(s) 773, 1010
PpsI GAGTC 2 cut(s) 773, 1010
PshBI ATTAAT 1 cut(s) 1083
Psp124BI GAGCTC 1 cut(s) 367
Psp6I CCWGG 2 cut(s) 31, 658
PspFI CCCAGC 1 cut(s) 269
PspGI CCWGG 2 cut(s) 31, 658
PspN4I GGNNCC 2 cut(s) 150, 857
PspPI GGNCC 2 cut(s) 787, 979
PspXI VCTCGAGB 1 cut(s) 520
PstI CTGCAG 1 cut(s) 470
RsaI GTAC 4 cut(s) 206, 233, 698, 857
RsaNI GTAC 4 cut(s) 205, 232, 697, 856
RseI CAYNNNNRTG 1 cut(s) 116
SacI GAGCTC 1 cut(s) 367
SapI GCTCTTC 1 cut(s) 54
SaqAI TTAA 1 cut(s) 1083
SatI GCNGC 4 cut(s) 65, 806, 1059, 1062
Sau3AI GATC 9 cut(s) 177, 182, 424, 462, 538, 937, 946, 1009, 1042
Sau96I GGNCC 2 cut(s) 787, 979
ScaI AGTACT 1 cut(s) 698
SchI GAGTC 2 cut(s) 773, 1010
ScrFI CCNGG 5 cut(s) 33, 660, 785, 786, 873
SduI GDGCHC 1 cut(s) 367
SfaNI GCATC 3 cut(s) 312, 963, 1073
SfcI CTRYAG 2 cut(s) 352, 466
Sfr274I CTCGAG 1 cut(s) 520
SfuI TTCGAA 1 cut(s) 645
SinI GGWCC 1 cut(s) 979
SlaI CTCGAG 1 cut(s) 520
SmaI CCCGGG 1 cut(s) 786
SmiMI CAYNNNNRTG 1 cut(s) 116
SmlI CTYRAG 2 cut(s) 429, 520
SmoI CTYRAG 2 cut(s) 429, 520
Sse9I AATT 2 cut(s) 7, 1080
SseBI AGGCCT 1 cut(s) 663
SsiI CCGC 2 cut(s) 292, 982
SspMI CTAG 2 cut(s) 444, 822
SstI GAGCTC 1 cut(s) 367
StuI AGGCCT 1 cut(s) 663
StyD4I CCNGG 5 cut(s) 31, 658, 783, 784, 871
StyI CCWWGG 2 cut(s) 152, 370
TaaI ACNGT 2 cut(s) 635, 830
TaiI ACGT 2 cut(s) 893, 995
TaqI TCGA 6 cut(s) 14, 40, 185, 521, 645, 1025
TaqII GACCGA 1 cut(s) 398
TasI AATT 2 cut(s) 7, 1080
TatI WGTACW 1 cut(s) 696
TfiI GAWTC 1 cut(s) 42
Tru1I TTAA 1 cut(s) 1083
Tru9I TTAA 1 cut(s) 1083
TscAI CASTG 1 cut(s) 847
TseFI GTSAC 1 cut(s) 1072
TseI GCWGC 4 cut(s) 64, 805, 1058, 1061
Tsp45I GTSAC 1 cut(s) 1072
TspDTI ATGAA 6 cut(s) 522, 542, 577, 624, 974, 978
TspGWI ACGGA 1 cut(s) 1060
TspMI CCCGGG 1 cut(s) 784
TspRI CASTG 1 cut(s) 847
Van91I CCANNNNNTGG 1 cut(s) 796
VpaK11BI GGWCC 1 cut(s) 979
VspI ATTAAT 1 cut(s) 1083
XcmI CCANNNNNNNNNTGG 1 cut(s) 198
XhoI CTCGAG 1 cut(s) 520
XmaI CCCGGG 1 cut(s) 784
XmnI GAANNNNTTC 1 cut(s) 491
XspI CTAG 2 cut(s) 444, 822
ZrmI AGTACT 1 cut(s) 698
Zsp2I ATGCAT 2 cut(s) 399, 594
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.