Prupe.8G002700_v2.0.a1
NAC Family

inactive tRNA-specific adenosine deaminase-like protein 3 isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0006791
Physical Location & Seq
Forward (+)
239200 .. 244555
5356 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G002700.1

Sequence Viewer

Length: 1254 bp
ATGGACACGTGGCAGATCCTCCACATCCCAGACAACCCCCCAATCGCTCCCGACCAACAACCCACAGTGGATGCAATTGCGTCACTCATCGACCCAAAATTTGCTAACACTCTTGTAAGGCGTTTGAATCAAATATCACCATTGGAAAATCTCCGCCACGTGAAGCGGGTGAAGAAGAAATTTGTTGAAGGAGTTTACCTTACAGGAAAAACTCAACTATCTGTGATCCTATGTCTAGCTTCTGAAAATGGTAATCAGTTGGAGAGCATGCAGAATGATGTACAGGAGCTAATGAATTCCTACAAGTTGAGTCCTTTTATCACAAAAGTCTGCAAGTATGCTGCATTATCAAAAGAAGAGTGGGAAGAACAATGCAAGCTATGGCCAACATCTTATCATCCACCAACCTATAATATTGATGGCATTACTGGATTCAGTGAAGAGGACTCACAATCAGTGTTCAGATTCATGAAGTACGCTATTCAGTTGGCAAAGTCTAGCGATAATTTGGTAGTCAATGCTGCAGTTATAGTGGATCCTTCAGTTAAACAGGTAATCACTACTGCATGTGATCAAACTTGCTCTTCGTATAGTCCCACAAACAAGATCACCCTTGAAACCAGTTGCTGTGAAAAGCTAGAAGCTTTTATTTCCCATAGTGATTCGGATGGAGTATTGAACCATCAAACTGTGCATTCAAATAGTTTTCCAGACAAATCAAAACAATTATGTACCGGCGTATCTTGTTTATATCCTTGGCAATGGGCTGATCAACAATCAGACATGAGTTCGTGTTATTGGCACCCTTTACGTCATGCTGCCATTGTTGCTATTGAATCTTCTGCTGCCAGAGACAGATATCTTTTCCCCAGTTTGGGAAAAATCCAAGATAAGTCTTTTGAAATGGACAACATGCAGTCTTCTTCTGCAGGCTCTCCAGCAAAAAGACAAAAGACTAATTCTACAAATGTTCACAGTGACGACAATCTGACTAATGGTGAAGGTTCCAGTTCTTTATCAGCCAGGCCTTATCTGTGTACAGGTTTTGACATGTACCTTGTTTGGGAGCCGTGCATAATGTGTGCAATGGCACTTGTCCATCAGAGAATTAGGCGTATATTCTTTGCTTTCCCAAACCCGGATGCAGGGGCATTGGGTAGTGTTCACAGACTACAAGGGGAAACAAGCTTAAATCATCACTATGCTGTATTCAGAGTGTTAGTGCCTCAACAAATCCTTAGTAGGGAGGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0034641 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0090304 GO:1901360
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
dCMP_cyt_deam_1

Protein Analysis

418

Amino Acids

46.73

Weight (kDa)

6.23

Isoelectric Point (pI)

51.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 801
AciI CCGC 2 cut(s) 154, 166
AclWI GGATC 4 cut(s) 10, 220, 530, 543
AcoI YGGCCR 1 cut(s) 383
AcsI RAATTY 3 cut(s) 98, 179, 295
AcuI CTGAAG 1 cut(s) 525
AcvI CACGTG 2 cut(s) 9, 160
AfaI GTAC 5 cut(s) 282, 476, 733, 1039, 1055
AfiI CCNNNNNNNGG 6 cut(s) 874, 875, 1063, 1138, 1145, 1243
AflIII ACRYGT 2 cut(s) 6, 1050
AgsI TTSAA 7 cut(s) 127, 188, 617, 679, 699, 836, 902
AjnI CCWGG 1 cut(s) 1022
AluBI AGCT 6 cut(s) 239, 289, 379, 637, 644, 1188
AluI AGCT 6 cut(s) 239, 289, 379, 637, 644, 1188
Alw26I GTCTC 1 cut(s) 846
AlwI GGATC 4 cut(s) 10, 220, 530, 543
AlwNI CAGNNNCTG 1 cut(s) 627
AoxI GGCC 2 cut(s) 383, 1025
ApeKI GCWGC 4 cut(s) 341, 521, 818, 845
ApoI RAATTY 3 cut(s) 98, 179, 295
ArsI GACNNNNNNTTYG 2 cut(s) 83, 115
AsuC2I CCSGG 1 cut(s) 1139
AsuHPI GGTGA 4 cut(s) 129, 181, 601, 1010
BaeI ACNNNNGTAYC 2 cut(s) 723, 756
BalI TGGCCA 1 cut(s) 385
BamHI GGATCC 1 cut(s) 535
BanI GGYRCC 1 cut(s) 801
BbrPI CACGTG 2 cut(s) 9, 160
BbsI GAAGAC 1 cut(s) 912
BbvI GCAGC 4 cut(s) 328, 508, 805, 832
BccI CCATC 4 cut(s) 413, 662, 690, 1107
BceAI ACGGC 1 cut(s) 1054
BciT130I CCWGG 1 cut(s) 1024
BclI TGATCA 2 cut(s) 571, 769
BcnI CCSGG 1 cut(s) 1139
BcoDI GTCTC 1 cut(s) 846
BfaI CTAG 3 cut(s) 236, 498, 638
BfmI CTRYAG 2 cut(s) 522, 927
BisI GCNGC 4 cut(s) 342, 522, 819, 846
BlsI GCNGC 4 cut(s) 343, 523, 820, 847
Bme1390I CCNGG 2 cut(s) 1024, 1139
BmiI GGNNCC 4 cut(s) 537, 803, 1006, 1068
BmrFI CCNGG 2 cut(s) 1024, 1139
BmrI ACTGGG 1 cut(s) 864
BmsI GCATC 2 cut(s) 61, 1132
BmuI ACTGGG 1 cut(s) 864
BpiI GAAGAC 1 cut(s) 912
BpmI CTGGAG 1 cut(s) 921
BpuMI CCSGG 1 cut(s) 1139
BsaAI YACGTR 2 cut(s) 9, 160
BsaJI CCNNGG 1 cut(s) 755
Bsc4I CCNNNNNNNGG 6 cut(s) 874, 875, 1063, 1138, 1145, 1243
Bse118I RCCGGY 1 cut(s) 734
Bse1I ACTGG 4 cut(s) 433, 621, 870, 1008
Bse3DI GCAATG 2 cut(s) 767, 1092
BseBI CCWGG 1 cut(s) 1024
BseDI CCNNGG 1 cut(s) 755
BseGI GGATG 5 cut(s) 24, 76, 397, 673, 1147
BseLI CCNNNNNNNGG 6 cut(s) 874, 875, 1063, 1138, 1145, 1243
BseMI GCAATG 2 cut(s) 767, 1092
BseNI ACTGG 4 cut(s) 433, 621, 870, 1008
BseXI GCAGC 4 cut(s) 328, 508, 805, 832
BshFI GGCC 2 cut(s) 385, 1027
BshNI GGYRCC 1 cut(s) 801
BsiSI CCGG 2 cut(s) 735, 1139
BslFI GGGAC 1 cut(s) 579
BslI CCNNNNNNNGG 6 cut(s) 874, 875, 1063, 1138, 1145, 1243
BsmAI GTCTC 1 cut(s) 846
BsmFI GGGAC 1 cut(s) 579
BsmI GAATGC 1 cut(s) 694
BsnI GGCC 2 cut(s) 385, 1027
Bsp1407I TGTACA 2 cut(s) 280, 1037
Bsp143I GATC 6 cut(s) 15, 225, 535, 571, 606, 769
BspACI CCGC 2 cut(s) 154, 166
BspANI GGCC 2 cut(s) 385, 1027
BspHI TCATGA 1 cut(s) 468
BspLI GGNNCC 4 cut(s) 537, 803, 1006, 1068
BspMAI CTGCAG 2 cut(s) 526, 931
BspPI GGATC 4 cut(s) 10, 220, 530, 543
BspQI GCTCTTC 1 cut(s) 589
BspT107I GGYRCC 1 cut(s) 801
BsrDI GCAATG 2 cut(s) 767, 1092
BsrFI RCCGGY 1 cut(s) 734
BsrGI TGTACA 2 cut(s) 280, 1037
BsrI ACTGG 4 cut(s) 433, 621, 870, 1008
BssAI RCCGGY 1 cut(s) 734
BssECI CCNNGG 1 cut(s) 755
BssMI GATC 6 cut(s) 15, 225, 535, 571, 606, 769
BssT1I CCWWGG 1 cut(s) 755
Bst2UI CCWGG 1 cut(s) 1024
Bst4CI ACNGT 3 cut(s) 67, 691, 977
Bst6I CTCTTC 3 cut(s) 351, 435, 589
BstAUI TGTACA 2 cut(s) 280, 1037
BstBAI YACGTR 2 cut(s) 9, 160
BstC8I GCNNGC 3 cut(s) 269, 377, 931
BstDEI CTNAG 1 cut(s) 1238
BstF5I GGATG 5 cut(s) 24, 76, 397, 673, 1147
BstKTI GATC 6 cut(s) 18, 228, 538, 574, 609, 772
BstMAI GTCTC 1 cut(s) 846
BstMBI GATC 6 cut(s) 15, 225, 535, 571, 606, 769
BstMWI GCNNNNNNNGC 1 cut(s) 827
BstNI CCWGG 1 cut(s) 1024
BstNSI RCATGY 4 cut(s) 271, 570, 916, 1054
BstSCI CCNGG 2 cut(s) 1022, 1137
BstSFI CTRYAG 2 cut(s) 522, 927
BstV1I GCAGC 4 cut(s) 328, 508, 805, 832
BstV2I GAAGAC 1 cut(s) 912
BstX2I RGATCY 2 cut(s) 15, 535
BstYI RGATCY 2 cut(s) 15, 535
BsuRI GGCC 2 cut(s) 385, 1027
BtsCI GGATG 5 cut(s) 24, 76, 397, 673, 1147
BtsIMutI CAGTG 4 cut(s) 72, 442, 462, 982
Cac8I GCNNGC 3 cut(s) 269, 377, 931
CaiI CAGNNNCTG 1 cut(s) 627
CciI TCATGA 1 cut(s) 468
Cfr10I RCCGGY 1 cut(s) 734
CseI GACGC 1 cut(s) 69
Csp6I GTAC 5 cut(s) 281, 475, 732, 1038, 1054
CviAII CATG 7 cut(s) 268, 469, 567, 784, 815, 913, 1051
CviQI GTAC 5 cut(s) 281, 475, 732, 1038, 1054
DdeI CTNAG 1 cut(s) 1238
DpnI GATC 6 cut(s) 17, 227, 537, 573, 608, 771
DpnII GATC 6 cut(s) 15, 225, 535, 571, 606, 769
EaeI YGGCCR 1 cut(s) 383
Eam1104I CTCTTC 3 cut(s) 351, 435, 589
EarI CTCTTC 3 cut(s) 351, 435, 589
EciI GGCGGA 1 cut(s) 143
Eco130I CCWWGG 1 cut(s) 755
Eco147I AGGCCT 1 cut(s) 1027
Eco32I GATATC 1 cut(s) 860
Eco57I CTGAAG 1 cut(s) 525
Eco72I CACGTG 2 cut(s) 9, 160
EcoRI GAATTC 1 cut(s) 295
EcoRII CCWGG 1 cut(s) 1022
EcoRV GATATC 1 cut(s) 860
EcoT14I CCWWGG 1 cut(s) 755
ErhI CCWWGG 1 cut(s) 755
FaeI CATG 7 cut(s) 271, 472, 570, 787, 818, 916, 1054
FaqI GGGAC 1 cut(s) 579
FatI CATG 7 cut(s) 267, 468, 566, 783, 814, 912, 1050
FauI CCCGC 1 cut(s) 159
FbaI TGATCA 2 cut(s) 571, 769
Fnu4HI GCNGC 4 cut(s) 342, 522, 819, 846
FokI GGATG 5 cut(s) 11, 83, 384, 680, 1154
Fsp4HI GCNGC 4 cut(s) 342, 522, 819, 846
FspBI CTAG 3 cut(s) 236, 498, 638
GluI GCNGC 4 cut(s) 342, 522, 819, 846
GsuI CTGGAG 1 cut(s) 921
HaeIII GGCC 2 cut(s) 385, 1027
HapII CCGG 2 cut(s) 735, 1139
HgaI GACGC 1 cut(s) 69
Hin1II CATG 7 cut(s) 271, 472, 570, 787, 818, 916, 1054
HindIII AAGCTT 2 cut(s) 642, 1186
HinfI GANTC 7 cut(s) 127, 310, 432, 446, 465, 662, 836
HpaII CCGG 2 cut(s) 735, 1139
HphI GGTGA 4 cut(s) 129, 181, 601, 1010
Hpy166II GTNNAC 4 cut(s) 196, 973, 1038, 1165
Hpy188I TCNGA 7 cut(s) 244, 464, 667, 781, 990, 1104, 1214
Hpy188III TCNNGA 3 cut(s) 50, 469, 710
Hpy8I GTNNAC 4 cut(s) 196, 973, 1038, 1165
HpyAV CCTTC 3 cut(s) 182, 549, 995
HpyCH4III ACNGT 3 cut(s) 67, 691, 977
HpyCH4IV ACGT 3 cut(s) 8, 159, 811
HpyF10VI GCNNNNNNNGC 1 cut(s) 827
HpyF3I CTNAG 1 cut(s) 1238
HpySE526I ACGT 3 cut(s) 8, 159, 811
Hsp92II CATG 7 cut(s) 271, 472, 570, 787, 818, 916, 1054
Ksp22I TGATCA 2 cut(s) 571, 769
Kzo9I GATC 6 cut(s) 15, 225, 535, 571, 606, 769
LguI GCTCTTC 1 cut(s) 589
LmnI GCTCC 3 cut(s) 52, 286, 1066
Lsp1109I GCAGC 4 cut(s) 328, 508, 805, 832
LweI GCATC 2 cut(s) 61, 1132
MaeI CTAG 3 cut(s) 236, 498, 638
MaeII ACGT 3 cut(s) 8, 159, 811
MaeIII GTNAC 2 cut(s) 81, 977
MalI GATC 6 cut(s) 17, 227, 537, 573, 608, 771
MboI GATC 6 cut(s) 15, 225, 535, 571, 606, 769
MboII GAAGA 9 cut(s) 184, 187, 368, 377, 452, 576, 831, 912, 915
MfeI CAATTG 1 cut(s) 75
MflI RGATCY 2 cut(s) 15, 535
MlsI TGGCCA 1 cut(s) 385
MluCI AATT 8 cut(s) 75, 98, 179, 295, 505, 725, 958, 1107
MluNI TGGCCA 1 cut(s) 385
MlyI GAGTC 2 cut(s) 319, 440
MmeI TCCRAC 1 cut(s) 240
MnlI CCTC 4 cut(s) 29, 436, 1236, 1240
Mox20I TGGCCA 1 cut(s) 385
MscI TGGCCA 1 cut(s) 385
MseI TTAA 2 cut(s) 546, 1190
MslI CAYNNNNRTG 1 cut(s) 1200
Msp20I TGGCCA 1 cut(s) 385
MspI CCGG 2 cut(s) 735, 1139
MspR9I CCNGG 2 cut(s) 1024, 1139
MunI CAATTG 1 cut(s) 75
Mva1269I GAATGC 1 cut(s) 694
MvaI CCWGG 1 cut(s) 1024
MwoI GCNNNNNNNGC 1 cut(s) 827
NciI CCSGG 1 cut(s) 1139
NdeII GATC 6 cut(s) 15, 225, 535, 571, 606, 769
NlaIII CATG 7 cut(s) 271, 472, 570, 787, 818, 916, 1054
NlaIV GGNNCC 4 cut(s) 537, 803, 1006, 1068
NmuCI GTSAC 2 cut(s) 81, 977
NspI RCATGY 4 cut(s) 271, 570, 916, 1054
PaeI GCATGC 1 cut(s) 271
PagI TCATGA 1 cut(s) 468
PceI AGGCCT 1 cut(s) 1027
PciI ACATGT 1 cut(s) 1050
PciSI GCTCTTC 1 cut(s) 589
PctI GAATGC 1 cut(s) 694
PfeI GAWTC 5 cut(s) 127, 432, 465, 662, 836
PkrI GCNGC 4 cut(s) 343, 523, 820, 847
PleI GAGTC 2 cut(s) 318, 440
PmaCI CACGTG 2 cut(s) 9, 160
PmlI CACGTG 2 cut(s) 9, 160
PpsI GAGTC 2 cut(s) 318, 440
Ppu21I YACGTR 2 cut(s) 9, 160
PscI ACATGT 1 cut(s) 1050
Psp6I CCWGG 1 cut(s) 1022
PspCI CACGTG 2 cut(s) 9, 160
PspGI CCWGG 1 cut(s) 1022
PspN4I GGNNCC 4 cut(s) 537, 803, 1006, 1068
PstI CTGCAG 2 cut(s) 526, 931
PstNI CAGNNNCTG 1 cut(s) 627
PsuI RGATCY 2 cut(s) 15, 535
RsaI GTAC 5 cut(s) 282, 476, 733, 1039, 1055
RsaNI GTAC 5 cut(s) 281, 475, 732, 1038, 1054
RseI CAYNNNNRTG 1 cut(s) 1200
SapI GCTCTTC 1 cut(s) 589
SaqAI TTAA 2 cut(s) 546, 1190
SatI GCNGC 4 cut(s) 342, 522, 819, 846
Sau3AI GATC 6 cut(s) 15, 225, 535, 571, 606, 769
SchI GAGTC 2 cut(s) 319, 440
ScrFI CCNGG 2 cut(s) 1024, 1139
SfaNI GCATC 2 cut(s) 61, 1132
SfcI CTRYAG 2 cut(s) 522, 927
SmiMI CAYNNNNRTG 1 cut(s) 1200
SphI GCATGC 1 cut(s) 271
Sse9I AATT 8 cut(s) 75, 98, 179, 295, 505, 725, 958, 1107
SseBI AGGCCT 1 cut(s) 1027
SsiI CCGC 2 cut(s) 154, 166
SspI AATATT 1 cut(s) 415
SspMI CTAG 3 cut(s) 236, 498, 638
StuI AGGCCT 1 cut(s) 1027
StyD4I CCNGG 2 cut(s) 1022, 1137
StyI CCWWGG 1 cut(s) 755
TaaI ACNGT 3 cut(s) 67, 691, 977
TaiI ACGT 3 cut(s) 11, 162, 814
TaqI TCGA 1 cut(s) 90
TasI AATT 8 cut(s) 75, 98, 179, 295, 505, 725, 958, 1107
TatI WGTACW 2 cut(s) 280, 1037
TfiI GAWTC 5 cut(s) 127, 432, 465, 662, 836
Tru1I TTAA 2 cut(s) 546, 1190
Tru9I TTAA 2 cut(s) 546, 1190
TscAI CASTG 4 cut(s) 72, 442, 462, 982
TseFI GTSAC 2 cut(s) 81, 977
TseI GCWGC 4 cut(s) 341, 521, 818, 845
Tsp45I GTSAC 2 cut(s) 81, 977
TspDTI ATGAA 3 cut(s) 308, 457, 485
TspRI CASTG 4 cut(s) 72, 442, 462, 982
XapI RAATTY 3 cut(s) 98, 179, 295
XceI RCATGY 4 cut(s) 271, 570, 916, 1054
XspI CTAG 3 cut(s) 236, 498, 638
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.