Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0008801

Physical Location & Seq

Genomic Coordinates Reverse (-)

530845 .. 538656

Gene Structure 7812 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G006900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2625 bp

ATGGCGGAGCTCTCAGTGATAACAGTAGGAGGCAAGGGCTCATCTCTCTCGTCCTCCTCTGTCTACGCCGTTGCCAATGGCCTCGCTCAGTTACGCATCGACTCGTGGGCGCTCAATAGGCTCCCCTCCTCCTCCTCATCACCTCTCAATACCCACAACCTCGTCTCTCTCCTACCCTCTCTCCCAACCATTGAAGAATCCAGAGCTTCTCTCGTCGTCCTCCTCAGCAAGCTCCTCTCTCTCTCCGGTTCCCCCAGTATCCGTACTGTTCTTCCAGTTAAAATCGCGGAAGCACTCAATTCCCCAGACTTAAAGCACGAATCCCTCGATTTGAATGACGAGGAGGCTCTTGCGTTGGAGAAACTCAAGTTATCCTCTGCTTTGTACGCAATATGTGCGCTTCTGGACCACAAGTCGGCTGCTTTGTCGACGGTTTCGGATGCAGTAGCGGCGATTTCTTGCGAGGCATTGAAGGCCGACGTAGCGGCGTTCAATTTGATCGATTCAGGGGATGGGCACGCCGCGAAGGAGGAGATTGGGGTGGCCAGTGATTTGAAGGTGTTGCTCAACGGGTCTAAGTTAGTGGGTAAGGTTGAAATCGAAGCGATCTCGAGAATCCCCAAAATTCACGCGAGTTTGAGAGAGCAAGTGAAATCAGTACACTCCAAGACTCGGGTGGAGCTGAATTCTGGTGGGAAGTTAGTTTGTGCCGGGGTAGTGAGGACCGCTTTGTTGCCATTGGCCGCGGCTCTGTGGGACTTGGGGGACCGTAGTTTGTCCCGTGCGAAAATGAATGTGGATGGGGTGGGGAGTGAGAATTCGAGGTCGAGTTTGGTGGCATTGTTTGAGCAGAAAAGCCCAAGTGGTGAAAGCTTGAGAGGTGGGTTCAAGTTGGTTTCCCAATTAGTTTTTGAAGAGGAAGAGAATTATGATAATTTTGCTCATGAAGTGAATGTGTTGATGGGAATTGTGTGGAAAATTGTGACTTGGGAGGCAATTACGGCGTTTATGGTGTTGGAGGGAGCGGAGTTGAATGGGAAGAAGAGTGAAGGTAGTGAAGTGAGTGGAGGAGGGAATGTGAAAGTGGAGAAGAAGAGTGAGAAGAAGAAGAAGGTGGTTTTGGGAAAAGGAACTAGTGTTATAATACAGTTGATAAAAGATAGGTTGCAGGGTAAGGGAGGAAATGCTGTTGATAGTTTGGGCTTGTTGGGAAATTGGGTTGAAGAGCTTATATCGTTTTTGGACCCCAAGGACCCAGAGTTTGATAGTTTGTTGAACAGAGTGAAGGAGTTGGTGGAAAGCAATGAGACTAGAAGACTCCCCAAGCTCCCGAAGGGGACTCGTGACTTTGCAAAAGAACAAATGGCAATAAGAAAGAAAGCATTTTCGATAATTGAAGATGTCTTTGAGAGGCATGGTGCCACAGCATTGGATACTCCAGTTTTTGAATTGAGAGAAACTCTCATGGGGAAATATGGGGAAGATTCGAAATTGATTTATGATCTTGCTGACCAGGGAGGAGAGCTTTTATCACTGCGATATGATCTAACCGTTCCATTTGCTAGATATGTAGCTATGAATGGTATCACTTCTTTCAAAAGGTACCAAATAGCAAAGGTGTACAGAAGAGACAATCCATCGAAAGGACGATATCGTGAATTTTACCAATGTGACTTTGATATTGCTGGCCAATATGAAAAAATGGGGCCAGATTTTGAGGTTATTAAGATTTTAACAGAACTTCTTGATGAGCTGGATATTGGAGATTATGAGATTAAGTTGAACCACCGAAAGTTGTTGGATGGAATGTTGGAAATCTGCGGAGTACCTCCTGAAAAATTTAGAACTATTTGTTCAAGTATCGACAAGTTAGACAAGCAGTCTTTTGAGCAGATAAAAAAAGAAATGGTGGAAGAGAAGGGCTTAAGTGTTGAAACAGCAGACAAAATTGGTACCTTTGTAAAAGAGCGTGGACATCCTTTGGAATTGTTGTTTAAGCTAAAACAGGAGGGCAGCTCATTTTTAGAAAACAATGCATCAATAGATGCATTGAATGACCTGGAGATCTTATTCAAGGCTTTGGAAAAATCAAAGTGTATCAGAAACGTGACTTTTGACTTGAGTCTTGCAAGGGGTCTTGATTATTATACGGGAGTAATATATGAAGCTGTTTTTAAGGGGGGTGCACAGGTTGGTTCAATTGGTGGTGGTGGACGCTATGACAACCTTATAGGGATGTTCGGTACAAAGCAGGTTCCAGCTGTTGGTGTCAGCCTTGGAATTGAGCGAGTTTTTAATATAATGGAGCAGAAAGGCCAGAATCAGACAACCCGAGCAACCAAGACTGAAGTCCTGGTGAGTGTATTGGGGGATGATTTAACGCAAGCAGCTGAGTTAGCAAGCGAGCTGTGGGCTGCAAAAGTGAAAGCAGAATACTTGGTCAATAAAAGAGTGTCAAAGCACTTTGATCGAGCCAAGGAATCTAGGATCCCTTGGATGATAATCGTGGGTGAACGGGAGCTGAACGAAGGGGTTGTGAGATTGAAGGATATTGAGGCTGCCGAGGAAAGCATAATTCCAAGAAGTAGAATTGTGGAAGAACTTCAAAAACGGTTGAGTTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0019538 GO:0032543 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:0140053 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

HGTP_anticodon Lyase_aromatic tRNA-synt_His

Protein Analysis

875

Amino Acids

95.91

Weight (kDa)

5.92

Isoelectric Point (pI)

35.59

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008801)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02760 AT3G02760
fragaria_vesca	FvH4_2g00780 FvH4_2g00780 FvH4_2g00780 FvH4_2g00780 FvH4_3g14280 FvH4_3g25240
malus_domestica	MD05G1003500.v1.1 MD10G1004600.v1.1
prunus_persica	Prupe.8G006900_v2.0.a1
pyrus_communis	pycom05g00320 pycom10g00360
rosa_chinensis	RchiOBHm_Chr6g0251201
rosa_laevigata	RLG00000015474
rosa_multiflora	Rmu_sc0004077.1_g000009
rosa_roxburghii	Rroxscaffold_7G00216930
rosa_rugosa	Rorug05G0500700.1
rosa_samantha	Rh6AG010100 Rh6BG001900 Rh6CG007000 Rh6DG007500
rosa_wichuraiana	Rw6G000990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1142
Acc36I	ACCTGC	1 cut(s)	2242
Acc65I	GGTACC	2 cut(s)	1602, 1952
AccB1I	GGYRCC	3 cut(s)	1418, 1602, 1952
AccB7I	CCANNNNNTGG	1 cut(s)	2264
AccBSI	CCGCTC	1 cut(s)	1025
AccI	GTMKAC	2 cut(s)	63, 428
AccII	CGCG	4 cut(s)	287, 524, 632, 746
AclWI	GGATC	2 cut(s)	2482, 2495
AcoI	YGGCCR	3 cut(s)	543, 741, 1687
AcsI	RAATTY	5 cut(s)	624, 685, 817, 1658, 1838
AcuI	CTGAAG	1 cut(s)	2367
AfaI	GTAC	8 cut(s)	265, 386, 660, 1604, 1622, 1827, 1954, 2245
AfiI	CCNNNNNNNGG	4 cut(s)	415, 672, 1643, 2264
AflII	CTTAAG	1 cut(s)	1924
AhdI	GACNNNNNGTC	2 cut(s)	412, 1879
AhlI	ACTAGT	1 cut(s)	1133
AjnI	CCWGG	3 cut(s)	1512, 2058, 2352
AjuI	GAANNNNNNNTTGG	2 cut(s)	1103, 1135
Alw21I	GWGCWC	2 cut(s)	12, 2188
Alw26I	GTCTC	3 cut(s)	169, 1301, 1623
Alw44I	GTGCAC	1 cut(s)	2184
AlwI	GGATC	2 cut(s)	2482, 2495
Ama87I	CYCGRG	3 cut(s)	610, 672, 2331
AoxI	GGCC	7 cut(s)	79, 474, 543, 741, 1687, 1706, 2314
ApaLI	GTGCAC	1 cut(s)	2184
ApeKI	GCWGC	5 cut(s)	419, 2013, 2387, 2414, 2558
ApoI	RAATTY	5 cut(s)	624, 685, 817, 1658, 1838
ArsI	GACNNNNNNTTYG	2 cut(s)	1244, 1276
Asp700I	GAANNNNTTC	1 cut(s)	2601
Asp718I	GGTACC	2 cut(s)	1602, 1952
AspLEI	GCGC	2 cut(s)	112, 400
AspS9I	GGNCC	6 cut(s)	406, 723, 766, 1243, 1252, 1706
AsuC2I	CCSGG	1 cut(s)	712
AsuHPI	GGTGA	4 cut(s)	132, 878, 2368, 2522
AsuII	TTCGAA	1 cut(s)	1487
AvaI	CYCGRG	3 cut(s)	610, 672, 2331
AvaII	GGWCC	5 cut(s)	406, 723, 766, 1243, 1252
BaeGI	GKGCMC	2 cut(s)	519, 2188
BaeI	ACNNNNGTAYC	4 cut(s)	1425, 1458, 1944, 1977
BalI	TGGCCA	2 cut(s)	545, 1689
BamHI	GGATCC	1 cut(s)	2487
BanI	GGYRCC	3 cut(s)	1418, 1602, 1952
BanII	GRGCYC	2 cut(s)	12, 41
BauI	CACGAG	2 cut(s)	103, 1341
BbsI	GAAGAC	1 cut(s)	1321
Bbv12I	GWGCWC	2 cut(s)	12, 2188
BbvCI	CCTCAGC	1 cut(s)	224
BbvI	GCAGC	5 cut(s)	406, 2025, 2399, 2401, 2545
BccI	CCATC	5 cut(s)	506, 794, 955, 1645, 1796
BceAI	ACGGC	2 cut(s)	53, 1017
BcgI	CGANNNNNNTGC	2 cut(s)	2450, 2484
BciT130I	CCWGG	3 cut(s)	1514, 2060, 2354
BciVI	GTATCC	2 cut(s)	269, 1426
BcnI	CCSGG	1 cut(s)	712
BcoDI	GTCTC	3 cut(s)	169, 1301, 1623
BcuI	ACTAGT	1 cut(s)	1133
BfaI	CTAG	4 cut(s)	1134, 1311, 1563, 2484
BfoI	RGCGCY	1 cut(s)	113
BfrI	CTTAAG	1 cut(s)	1924
BfuAI	ACCTGC	1 cut(s)	2242
BfuI	GTATCC	2 cut(s)	269, 1426
BglII	AGATCT	1 cut(s)	2064
Bme1390I	CCNGG	4 cut(s)	712, 1514, 2060, 2354
Bme18I	GGWCC	5 cut(s)	406, 723, 766, 1243, 1252
BmeRI	GACNNNNNGTC	2 cut(s)	412, 1879
BmeT110I	CYCGRG	3 cut(s)	610, 672, 2331
BmgT120I	GGNCC	6 cut(s)	406, 723, 766, 1243, 1252, 1706
BmrFI	CCNGG	4 cut(s)	712, 1514, 2060, 2354
BmrI	ACTGGG	1 cut(s)	249
BmsI	GCATC	4 cut(s)	105, 430, 2035, 2045
BmuI	ACTGGG	1 cut(s)	249
BoxI	GACNNNNGTC	2 cut(s)	2121, 2348
BpiI	GAAGAC	1 cut(s)	1321
BplI	GAGNNNNNCTC	8 cut(s)	195, 227, 1444, 1476, 1446, 1478, 2000, 2032
BpmI	CTGGAG	2 cut(s)	1422, 2081
Bpu10I	CCTNAGC	1 cut(s)	224
Bpu14I	TTCGAA	1 cut(s)	1487
BpuEI	CTTGAG	3 cut(s)	350, 895, 2140
BpuMI	CCSGG	1 cut(s)	712
Bsa29I	ATCGAT	1 cut(s)	501
BsaBI	GATNNNNATC	1 cut(s)	2501
BsaJI	CCNNGG	8 cut(s)	711, 744, 1248, 1513, 2275, 2475, 2492, 2562
BsaWI	WCCGGW	1 cut(s)	245
BsaXI	ACNNNNNCTCC	4 cut(s)	165, 195, 1062, 1092
Bsc4I	CCNNNNNNNGG	4 cut(s)	415, 672, 1643, 2264
Bse1I	ACTGG	4 cut(s)	255, 275, 546, 1439
Bse3DI	GCAATG	1 cut(s)	1309
Bse8I	GATNNNNATC	1 cut(s)	2501
BseBI	CCWGG	3 cut(s)	1514, 2060, 2354
BseCI	ATCGAT	1 cut(s)	501
BseDI	CCNNGG	8 cut(s)	711, 744, 1248, 1513, 2275, 2475, 2492, 2562
BseGI	GGATG	8 cut(s)	445, 517, 805, 1807, 1975, 2241, 2377, 2502
BseJI	GATNNNNATC	1 cut(s)	2501
BseLI	CCNNNNNNNGG	4 cut(s)	415, 672, 1643, 2264
BseMI	GCAATG	1 cut(s)	1309
BseMII	CTCAG	4 cut(s)	27, 101, 238, 2382
BseNI	ACTGG	4 cut(s)	255, 275, 546, 1439
BseSI	GKGCMC	2 cut(s)	519, 2188
BseXI	GCAGC	5 cut(s)	406, 2025, 2399, 2401, 2545
Bsh1236I	CGCG	4 cut(s)	287, 524, 632, 746
BshFI	GGCC	7 cut(s)	81, 476, 545, 743, 1689, 1708, 2316
BshNI	GGYRCC	3 cut(s)	1418, 1602, 1952
BshVI	ATCGAT	1 cut(s)	501
BsiHKAI	GWGCWC	2 cut(s)	12, 2188
BsiHKCI	CYCGRG	3 cut(s)	610, 672, 2331
BsiSI	CCGG	2 cut(s)	246, 711
BslFI	GGGAC	4 cut(s)	763, 770, 779, 1351
BslI	CCNNNNNNNGG	4 cut(s)	415, 672, 1643, 2264
BsmAI	GTCTC	3 cut(s)	169, 1301, 1623
BsmBI	CGTCTC	1 cut(s)	169
BsmFI	GGGAC	4 cut(s)	763, 770, 779, 1351
BsnI	GGCC	7 cut(s)	81, 476, 545, 743, 1689, 1708, 2316
BsoBI	CYCGRG	3 cut(s)	610, 672, 2331
Bsp119I	TTCGAA	1 cut(s)	1487
Bsp1286I	GDGCHC	4 cut(s)	12, 41, 519, 2188
Bsp1407I	TGTACA	1 cut(s)	1620
Bsp143I	GATC	7 cut(s)	498, 606, 1501, 1543, 2064, 2467, 2487
BspANI	GGCC	7 cut(s)	81, 476, 545, 743, 1689, 1708, 2316
BspCNI	CTCAG	4 cut(s)	26, 100, 237, 2383
BspDI	ATCGAT	1 cut(s)	501
BspFNI	CGCG	4 cut(s)	287, 524, 632, 746
BspHI	TCATGA	2 cut(s)	943, 2621
BspMI	ACCTGC	1 cut(s)	2242
BspPI	GGATC	2 cut(s)	2482, 2495
BspQI	GCTCTTC	1 cut(s)	1218
BspT104I	TTCGAA	1 cut(s)	1487
BspT107I	GGYRCC	3 cut(s)	1418, 1602, 1952
BspTI	CTTAAG	1 cut(s)	1924
BsrBI	CCGCTC	1 cut(s)	1025
BsrDI	GCAATG	1 cut(s)	1309
BsrGI	TGTACA	1 cut(s)	1620
BsrI	ACTGG	4 cut(s)	255, 275, 546, 1439
BssECI	CCNNGG	8 cut(s)	711, 744, 1248, 1513, 2275, 2475, 2492, 2562
BssMI	GATC	7 cut(s)	498, 606, 1501, 1543, 2064, 2467, 2487
BssSI	CACGAG	2 cut(s)	103, 1341
BssT1I	CCWWGG	4 cut(s)	1248, 2275, 2475, 2492
Bst2BI	CACGAG	2 cut(s)	103, 1341
Bst2UI	CCWGG	3 cut(s)	1514, 2060, 2354
Bst4CI	ACNGT	7 cut(s)	25, 268, 433, 770, 1149, 1552, 2613
Bst6I	CTCTTC	7 cut(s)	909, 915, 1037, 1088, 1218, 1621, 1908
BstAFI	CTTAAG	1 cut(s)	1924
BstAPI	GCANNNNNTGC	1 cut(s)	395
BstAUI	TGTACA	1 cut(s)	1620
BstBI	TTCGAA	1 cut(s)	1487
BstC8I	GCNNGC	6 cut(s)	230, 519, 1687, 2385, 2401, 2405
BstDEI	CTNAG	5 cut(s)	13, 87, 224, 576, 2391
BstDSI	CCRYGG	1 cut(s)	744
BstF5I	GGATG	8 cut(s)	445, 517, 805, 1807, 1975, 2241, 2377, 2502
BstFNI	CGCG	4 cut(s)	287, 524, 632, 746
BstH2I	RGCGCY	1 cut(s)	113
BstHHI	GCGC	2 cut(s)	112, 400
BstKTI	GATC	7 cut(s)	501, 609, 1504, 1546, 2067, 2470, 2490
BstMAI	GTCTC	3 cut(s)	169, 1301, 1623
BstMBI	GATC	7 cut(s)	498, 606, 1501, 1543, 2064, 2467, 2487
BstMWI	GCNNNNNNNGC	8 cut(s)	118, 386, 395, 449, 473, 482, 1001, 2396
BstNI	CCWGG	3 cut(s)	1514, 2060, 2354
BstPAI	GACNNNNGTC	2 cut(s)	2121, 2348
BstSCI	CCNGG	4 cut(s)	710, 1512, 2058, 2352
BstSLI	GKGCMC	2 cut(s)	519, 2188
BstUI	CGCG	4 cut(s)	287, 524, 632, 746
BstV1I	GCAGC	5 cut(s)	406, 2025, 2399, 2401, 2545
BstV2I	GAAGAC	1 cut(s)	1321
BstX2I	RGATCY	2 cut(s)	2064, 2487
BstXI	CCANNNNNNTGG	1 cut(s)	1429
BstYI	RGATCY	2 cut(s)	2064, 2487
Bsu15I	ATCGAT	1 cut(s)	501
BsuI	GTATCC	2 cut(s)	269, 1426
BsuRI	GGCC	7 cut(s)	81, 476, 545, 743, 1689, 1708, 2316
BsuTUI	ATCGAT	1 cut(s)	501
BtgI	CCRYGG	1 cut(s)	744
BtsCI	GGATG	8 cut(s)	445, 517, 805, 1807, 1975, 2241, 2377, 2502
BtsI	GCAGTG	1 cut(s)	1532
BtsIMutI	CAGTG	3 cut(s)	21, 553, 1532
BveI	ACCTGC	1 cut(s)	2242
Cac8I	GCNNGC	6 cut(s)	230, 519, 1687, 2385, 2401, 2405
CciI	TCATGA	2 cut(s)	943, 2621
CfoI	GCGC	2 cut(s)	112, 400
Cfr13I	GGNCC	6 cut(s)	406, 723, 766, 1243, 1252, 1706
Cfr42I	CCGCGG	1 cut(s)	747
ClaI	ATCGAT	1 cut(s)	501
CseI	GACGC	1 cut(s)	2223
Csp6I	GTAC	8 cut(s)	264, 385, 659, 1603, 1621, 1826, 1953, 2244
CviAII	CATG	4 cut(s)	944, 1415, 1465, 2622
CviQI	GTAC	8 cut(s)	264, 385, 659, 1603, 1621, 1826, 1953, 2244
DdeI	CTNAG	5 cut(s)	13, 87, 224, 576, 2391
DpnI	GATC	7 cut(s)	500, 608, 1503, 1545, 2066, 2469, 2489
DpnII	GATC	7 cut(s)	498, 606, 1501, 1543, 2064, 2467, 2487
DriI	GACNNNNNGTC	2 cut(s)	412, 1879
EaeI	YGGCCR	3 cut(s)	543, 741, 1687
Eam1104I	CTCTTC	7 cut(s)	909, 915, 1037, 1088, 1218, 1621, 1908
Eam1105I	GACNNNNNGTC	2 cut(s)	412, 1879
EarI	CTCTTC	7 cut(s)	909, 915, 1037, 1088, 1218, 1621, 1908
EciI	GGCGGA	1 cut(s)	20
Ecl136II	GAGCTC	1 cut(s)	10
Eco130I	CCWWGG	4 cut(s)	1248, 2275, 2475, 2492
Eco24I	GRGCYC	2 cut(s)	12, 41
Eco32I	GATATC	1 cut(s)	1652
Eco47I	GGWCC	5 cut(s)	406, 723, 766, 1243, 1252
Eco53kI	GAGCTC	1 cut(s)	10
Eco57I	CTGAAG	1 cut(s)	2367
Eco88I	CYCGRG	3 cut(s)	610, 672, 2331
EcoICRI	GAGCTC	1 cut(s)	10
EcoO109I	RGGNCCY	1 cut(s)	1252
EcoRI	GAATTC	2 cut(s)	685, 817
EcoRII	CCWGG	3 cut(s)	1512, 2058, 2352
EcoRV	GATATC	1 cut(s)	1652
EcoT14I	CCWWGG	4 cut(s)	1248, 2275, 2475, 2492
EcoT22I	ATGCAT	2 cut(s)	2038, 2050
EcoT38I	GRGCYC	2 cut(s)	12, 41
ErhI	CCWWGG	4 cut(s)	1248, 2275, 2475, 2492
Esp3I	CGTCTC	1 cut(s)	169
FaeI	CATG	4 cut(s)	947, 1418, 1468, 2625
FaqI	GGGAC	4 cut(s)	763, 770, 779, 1351
FatI	CATG	4 cut(s)	943, 1414, 1464, 2621
FblI	GTMKAC	2 cut(s)	63, 428
FokI	GGATG	8 cut(s)	452, 524, 812, 1814, 1962, 2248, 2384, 2509
FriOI	GRGCYC	2 cut(s)	12, 41
FspBI	CTAG	4 cut(s)	1134, 1311, 1563, 2484
GlaI	GCGC	2 cut(s)	111, 399
GsuI	CTGGAG	2 cut(s)	1422, 2081
HaeII	RGCGCY	1 cut(s)	113
HaeIII	GGCC	7 cut(s)	81, 476, 545, 743, 1689, 1708, 2316
HapII	CCGG	2 cut(s)	246, 711
HgaI	GACGC	1 cut(s)	2223
HhaI	GCGC	2 cut(s)	112, 400
Hin1II	CATG	4 cut(s)	947, 1418, 1468, 2625
Hin6I	GCGC	2 cut(s)	110, 398
HinP1I	GCGC	2 cut(s)	110, 398
HincII	GTYRAC	1 cut(s)	429
HindII	GTYRAC	1 cut(s)	429
HindIII	AAGCTT	1 cut(s)	871
HpaII	CCGG	2 cut(s)	246, 711
HphI	GGTGA	4 cut(s)	132, 878, 2368, 2522
Hpy166II	GTNNAC	8 cut(s)	64, 429, 661, 1621, 1973, 2186, 2213, 2513
Hpy188I	TCNGA	3 cut(s)	439, 2102, 2325
Hpy8I	GTNNAC	8 cut(s)	64, 429, 661, 1621, 1973, 2186, 2213, 2513
Hpy99I	CGWCG	3 cut(s)	218, 433, 482
HpyCH4III	ACNGT	7 cut(s)	25, 268, 433, 770, 1149, 1552, 2613
HpyCH4IV	ACGT	2 cut(s)	480, 2106
HpyCH4V	TGCA	8 cut(s)	443, 1168, 1352, 2036, 2048, 2129, 2186, 2417
HpyF10VI	GCNNNNNNNGC	8 cut(s)	118, 386, 395, 449, 473, 482, 1001, 2396
HpyF3I	CTNAG	5 cut(s)	13, 87, 224, 576, 2391
HpySE526I	ACGT	2 cut(s)	480, 2106
Hsp92II	CATG	4 cut(s)	947, 1418, 1468, 2625
HspAI	GCGC	2 cut(s)	110, 398
KpnI	GGTACC	2 cut(s)	1606, 1956
KspI	CCGCGG	1 cut(s)	747
Kzo9I	GATC	7 cut(s)	498, 606, 1501, 1543, 2064, 2467, 2487
LguI	GCTCTTC	1 cut(s)	1218
LmnI	GCTCC	8 cut(s)	7, 126, 237, 679, 1022, 1332, 2305, 2518
Lsp1109I	GCAGC	5 cut(s)	406, 2025, 2399, 2401, 2545
LweI	GCATC	4 cut(s)	105, 430, 2035, 2045
MaeI	CTAG	4 cut(s)	1134, 1311, 1563, 2484
MaeII	ACGT	2 cut(s)	480, 2106
MaeIII	GTNAC	5 cut(s)	90, 982, 1343, 1670, 2107
MalI	GATC	7 cut(s)	500, 608, 1503, 1545, 2066, 2469, 2489
MbiI	CCGCTC	1 cut(s)	1025
MboI	GATC	7 cut(s)	498, 606, 1501, 1543, 2064, 2467, 2487
MfeI	CAATTG	1 cut(s)	2199
MflI	RGATCY	2 cut(s)	2064, 2487
MhlI	GDGCHC	4 cut(s)	12, 41, 519, 2188
MlsI	TGGCCA	2 cut(s)	545, 1689
MluNI	TGGCCA	2 cut(s)	545, 1689
MlyI	GAGTC	5 cut(s)	95, 664, 1311, 1333, 2131
MmeI	TCCRAC	4 cut(s)	336, 996, 1779, 1791
Mox20I	TGGCCA	2 cut(s)	545, 1689
Mph1103I	ATGCAT	2 cut(s)	2038, 2050
MroXI	GAANNNNTTC	1 cut(s)	2601
MscI	TGGCCA	2 cut(s)	545, 1689
Msp20I	TGGCCA	2 cut(s)	545, 1689
MspA1I	CMGCKG	3 cut(s)	746, 2261, 2390
MspCI	CTTAAG	1 cut(s)	1924
MspI	CCGG	2 cut(s)	246, 711
MspR9I	CCNGG	4 cut(s)	712, 1514, 2060, 2354
MunI	CAATTG	1 cut(s)	2199
MvaI	CCWGG	3 cut(s)	1514, 2060, 2354
MvnI	CGCG	4 cut(s)	287, 524, 632, 746
MwoI	GCNNNNNNNGC	8 cut(s)	118, 386, 395, 449, 473, 482, 1001, 2396
NciI	CCSGG	1 cut(s)	712
NdeII	GATC	7 cut(s)	498, 606, 1501, 1543, 2064, 2467, 2487
NlaIII	CATG	4 cut(s)	947, 1418, 1468, 2625
NmeAIII	GCCGAG	1 cut(s)	2587
NmuCI	GTSAC	4 cut(s)	982, 1343, 1670, 2107
NsiI	ATGCAT	2 cut(s)	2038, 2050
NspV	TTCGAA	1 cut(s)	1487
PaeR7I	CTCGAG	1 cut(s)	610
PagI	TCATGA	2 cut(s)	943, 2621
PciSI	GCTCTTC	1 cut(s)	1218
PcsI	WCGNNNNNNNCGW	1 cut(s)	324
PdmI	GAANNNNTTC	1 cut(s)	2601
PfeI	GAWTC	7 cut(s)	197, 320, 503, 615, 1484, 2320, 2480
PflMI	CCANNNNNTGG	1 cut(s)	2264
PleI	GAGTC	5 cut(s)	95, 664, 1311, 1333, 2130
PpsI	GAGTC	5 cut(s)	95, 664, 1311, 1333, 2130
PpuMI	RGGWCCY	1 cut(s)	1252
PshAI	GACNNNNGTC	2 cut(s)	2121, 2348
PsiI	TTATAA	1 cut(s)	1142
Psp124BI	GAGCTC	1 cut(s)	12
Psp5II	RGGWCCY	1 cut(s)	1252
Psp6I	CCWGG	3 cut(s)	1512, 2058, 2352
PspGI	CCWGG	3 cut(s)	1512, 2058, 2352
PspPI	GGNCC	6 cut(s)	406, 723, 766, 1243, 1252, 1706
PspPPI	RGGWCCY	1 cut(s)	1252
PsuI	RGATCY	2 cut(s)	2064, 2487
PvuII	CAGCTG	2 cut(s)	2261, 2390
RsaI	GTAC	8 cut(s)	265, 386, 660, 1604, 1622, 1827, 1954, 2245
RsaNI	GTAC	8 cut(s)	264, 385, 659, 1603, 1621, 1826, 1953, 2244
SacI	GAGCTC	1 cut(s)	12
SacII	CCGCGG	1 cut(s)	747
SalI	GTCGAC	1 cut(s)	427
SapI	GCTCTTC	1 cut(s)	1218
Sau3AI	GATC	7 cut(s)	498, 606, 1501, 1543, 2064, 2467, 2487
Sau96I	GGNCC	6 cut(s)	406, 723, 766, 1243, 1252, 1706
SchI	GAGTC	5 cut(s)	95, 664, 1311, 1333, 2131
ScrFI	CCNGG	4 cut(s)	712, 1514, 2060, 2354
SduI	GDGCHC	4 cut(s)	12, 41, 519, 2188
SfaNI	GCATC	4 cut(s)	105, 430, 2035, 2045
Sfr274I	CTCGAG	1 cut(s)	610
Sfr303I	CCGCGG	1 cut(s)	747
SfuI	TTCGAA	1 cut(s)	1487
SgrBI	CCGCGG	1 cut(s)	747
SinI	GGWCC	5 cut(s)	406, 723, 766, 1243, 1252
SlaI	CTCGAG	1 cut(s)	610
SmlI	CTYRAG	5 cut(s)	365, 610, 874, 1924, 2119
SmoI	CTYRAG	5 cut(s)	365, 610, 874, 1924, 2119
SpeI	ACTAGT	1 cut(s)	1133
SspMI	CTAG	4 cut(s)	1134, 1311, 1563, 2484
SstI	GAGCTC	1 cut(s)	12
StyD4I	CCNGG	4 cut(s)	710, 1512, 2058, 2352
StyI	CCWWGG	4 cut(s)	1248, 2275, 2475, 2492
TaaI	ACNGT	7 cut(s)	25, 268, 433, 770, 1149, 1552, 2613
TaiI	ACGT	2 cut(s)	483, 2109
TatI	WGTACW	2 cut(s)	658, 1620
TauI	GCSGC	5 cut(s)	452, 488, 524, 746, 749
TfiI	GAWTC	7 cut(s)	197, 320, 503, 615, 1484, 2320, 2480
TscAI	CASTG	3 cut(s)	21, 553, 1539
TseFI	GTSAC	4 cut(s)	982, 1343, 1670, 2107
TseI	GCWGC	5 cut(s)	419, 2013, 2387, 2414, 2558
Tsp45I	GTSAC	4 cut(s)	982, 1343, 1670, 2107
TspDTI	ATGAA	6 cut(s)	806, 960, 1592, 1710, 2178, 2610
TspGWI	ACGGA	1 cut(s)	251
TspRI	CASTG	3 cut(s)	21, 553, 1539
Van91I	CCANNNNNTGG	1 cut(s)	2264
Vha464I	CTTAAG	1 cut(s)	1924
VneI	GTGCAC	1 cut(s)	2184
VpaK11BI	GGWCC	5 cut(s)	406, 723, 766, 1243, 1252
XapI	RAATTY	5 cut(s)	624, 685, 817, 1658, 1838
XcmI	CCANNNNNNNNNTGG	1 cut(s)	673
XhoI	CTCGAG	1 cut(s)	610
XmiI	GTMKAC	2 cut(s)	63, 428
XmnI	GAANNNNTTC	1 cut(s)	2601
XspI	CTAG	4 cut(s)	1134, 1311, 1563, 2484
Zsp2I	ATGCAT	2 cut(s)	2038, 2050

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.