Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004077.1

Orthogroup ID

OG0008801

Physical Location & Seq

Genomic Coordinates Forward (+)

21148 .. 27098

Gene Structure 5951 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004077.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2643 bp

atggcgggccttgcagtgataagagtcggaggcaaaggctcatctctctcctcctccgccgtctacgccgtcgccaatgccctcgctcacgtcactatcgactcttccgccctggacagactctcctcctcctcgtccgccgccaatctcaagccttaccacctcgtctctctcctcccttccttcccgtccgtccaagaatccagagcctccctcgttgtcctcctcgccaagctcctctccctcaacatccgtacggttctcccggttcgaatcgccgccgccctaaattccggctccactcaagacttggggctcgaaaccctcgatttgaccgaagaggaggctcttgcactggagaagctcaaagattcgtctgctttgtacggcgtctgtgcgcttctggaccaccaatcggcggctctgtccacggtttcggacgccgtcgcggcgctttcttgcgaggcgttgaaggccgacgtggcggggtttaattcggttgacgccggggacgggtacgccgcgaaggaggtgatcggagttgctagtgatttgaaggttttgttgaacgggtcgaagttagtcggcaaagttgagactgaagctgtatcggagattccgaaaattcacgccagtctgagagtgcaagtgaaattggtgcatgctaagactagggaggagctgaattctggagccaaagtagcgaaaggtggttcccggagcgccaggtcggaaaggacggcattgttggcgttggcggcggcgctgtttgacttgggggattactgtctccggcgagcgaagttggatttggaggcagtgggaagtgagagtctgcgtttgagattggtggagttgtttgggaagcaatgccctagtggtgaaagcttgagaagtgggcttaagctggttcaggagttggctttcgaagaggaggagaattatgttaagtttgcgcatgcagtgaatgtgttgatggagcttgtttggaagattgtgacttgggaggccataacagtgtttgtggcgctggagggagcagagttgagtggaaagggtcaaggaggtgaagtgaatggagaagtgaatgcgaaagcagggaagaagagtgagaagaagaagaaggcggttttggggaaagggacaactgttatggtacagttgattaaagataagctgctgggtgagggaggaaatgctgttgatagttcagagttgttggaaaattgggtcaaggagcttttattgtttttggacccgaagagctctgagtttgatggtttgttgaacaaggtgaaggagatagtagaaagcaatgaaactagaagactcccaaagcttccaaagggtactcgtgactttgcaaaagaacaaatgacaataagaaagaaagcattttcgataatagaagatgtttttgagaggcatggtgccacagctctggatactccagtttttgaattgagagacactctcatgggcaaatatggggaagactcgaaattgatttatgatcttgctgaccagggaggagagctttcctcactgcgatatgatttaactgttccatttgctaggtatgttgccatgaatggtatcacatcctttaaaaggtaccaaatagcaaaggtctacagaagagacaatccctctaagggtagataccgtgagttctaccaatgcgactttgatattgctggcccaagtgaaaaaatgggaccagattttgaggctgtctatgtgctaacagaacttcttgatgagctgaatattggagactacgaggttaagttaaatcaccgaaagttgttggatggaatgttggaaatatgtggagtgcctcctgaaaaattcagaactatttgttctagtatcgacaagttagacaagcagtcattcgagcaaataaaaaaagaaatggtggaggagaagggcttaagtgttgagacagccgacagaattggtacttttgtgaaagagcggggacatcctttggaattgttatctaagcttaaacaggagggcagcgagttcttggagaacaattcatctatagatgcactgaatgacctggagatcttgttcaaatgtttggaaaagtcacagtgtattggaaaagtggtttttgacttgagtcttgcaaggggtcttgattattatactggagtcatatatgaagctgttttcaagggtggtgcgcagatgggttccattgctgctggtggacgatatgacaaccttattgggatgtttggtacaaagcaagttccagcagttggtgtcagccttggaattgagcgagtatttgctataatggagcagcttcacaaagaccagaatcagacaacccgggcaaccaagactgaggtcctagtgagtatattaggggatgatataggactagcagcagagctatcaggtgagttgtggaagggaaaagtgcaagcagaattcttggtcaataagagagtgacgaagcactttgatcgagcaaaggattctaagattccctggatgataattgtgggtgaaaaagagcagaaagaaggggttgttcgattgaagaacattgcagctggggaagaagttgtaattcagagaagtgatattgttgaagaacttaagaagcggttgaatgcatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0019538 GO:0032543 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:0140053 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

HGTP_anticodon Lyase_aromatic tRNA-synt_His

Protein Analysis

880

Amino Acids

96.05

Weight (kDa)

5.92

Isoelectric Point (pI)

33.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008801)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02760 AT3G02760
fragaria_vesca	FvH4_2g00780 FvH4_2g00780 FvH4_2g00780 FvH4_2g00780 FvH4_3g14280 FvH4_3g25240
malus_domestica	MD05G1003500.v1.1 MD10G1004600.v1.1
prunus_persica	Prupe.8G006900_v2.0.a1
pyrus_communis	pycom05g00320 pycom10g00360
rosa_chinensis	RchiOBHm_Chr6g0251201
rosa_laevigata	RLG00000015474
rosa_multiflora	Rmu_sc0004077.1_g000009
rosa_roxburghii	Rroxscaffold_7G00216930
rosa_rugosa	Rorug05G0500700.1
rosa_samantha	Rh6AG010100 Rh6BG001900 Rh6CG007000 Rh6DG007500
rosa_wichuraiana	Rw6G000990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	957, 2199
Acc65I	GGTACC	1 cut(s)	1614
AccB1I	GGYRCC	2 cut(s)	1430, 1614
AccB7I	CCANNNNNTGG	1 cut(s)	2276
AccBSI	CCGCTC	1 cut(s)	1981
AccI	GTMKAC	2 cut(s)	63, 1632
AccII	CGCG	2 cut(s)	449, 524
AcsI	RAATTY	5 cut(s)	289, 624, 685, 1850, 2450
AcuI	CTGAAG	1 cut(s)	621
AcyI	GRCGYC	3 cut(s)	390, 441, 504
AfaI	GTAC	8 cut(s)	256, 386, 518, 1158, 1351, 1616, 1966, 2257
AfiI	CCNNNNNNNGG	6 cut(s)	415, 418, 513, 1611, 1655, 2276
AflII	CTTAAG	3 cut(s)	902, 1936, 2621
AhdI	GACNNNNNGTC	1 cut(s)	1891
AjiI	CACGTC	2 cut(s)	91, 481
AjnI	CCWGG	5 cut(s)	111, 725, 1524, 2070, 2510
AjuI	GAANNNNNNNTTGG	4 cut(s)	794, 826, 1115, 1147
AloI	GAACNNNNNNTCC	2 cut(s)	2066, 2098
Alw21I	GWGCWC	1 cut(s)	1268
Alw26I	GTCTC	7 cut(s)	172, 590, 794, 1461, 1635, 1770, 1940
Ama87I	CYCGRG	1 cut(s)	2349
AoxI	GGCC	4 cut(s)	7, 474, 1008, 1699
ApeKI	GCWGC	6 cut(s)	1177, 2025, 2216, 2320, 2405, 2573
ApoI	RAATTY	5 cut(s)	289, 624, 685, 1850, 2450
Asp718I	GGTACC	1 cut(s)	1614
AspLEI	GCGC	7 cut(s)	400, 454, 725, 766, 958, 1030, 2200
AspS9I	GGNCC	6 cut(s)	7, 406, 1255, 1700, 1718, 2368
AsuC2I	CCSGG	5 cut(s)	266, 508, 718, 2350, 2351
AsuHPI	GGTGA	8 cut(s)	544, 893, 1079, 1196, 1306, 1790, 2432, 2540
AsuII	TTCGAA	2 cut(s)	271, 927
AvaI	CYCGRG	1 cut(s)	2349
AvaII	GGWCC	4 cut(s)	406, 1255, 1718, 2368
BaeI	ACNNNNGTAYC	4 cut(s)	1437, 1470, 1956, 1989
BanI	GGYRCC	2 cut(s)	1430, 1614
BanII	GRGCYC	2 cut(s)	318, 1268
BauI	CACGAG	1 cut(s)	1353
BbsI	GAAGAC	2 cut(s)	1333, 1500
Bbv12I	GWGCWC	1 cut(s)	1268
BbvI	GCAGC	6 cut(s)	1164, 2037, 2203, 2332, 2417, 2585
BccI	CCATC	4 cut(s)	970, 1271, 1808, 2197
BceAI	ACGGC	5 cut(s)	44, 53, 403, 428, 756
BcgI	CGANNNNNNTGC	2 cut(s)	2468, 2502
BciT130I	CCWGG	5 cut(s)	113, 727, 1526, 2072, 2512
BciVI	GTATCC	1 cut(s)	1438
BcnI	CCSGG	5 cut(s)	266, 508, 718, 2350, 2351
BcoDI	GTCTC	7 cut(s)	172, 590, 794, 1461, 1635, 1770, 1940
BfaI	CTAG	8 cut(s)	546, 672, 876, 1323, 1575, 1869, 2372, 2402
BfmI	CTRYAG	2 cut(s)	1633, 2052
BfoI	RGCGCY	4 cut(s)	455, 726, 767, 1031
BfrI	CTTAAG	3 cut(s)	902, 1936, 2621
BfuI	GTATCC	1 cut(s)	1438
BglI	GCCNNNNNGGC	2 cut(s)	449, 482
BglII	AGATCT	1 cut(s)	2076
Bme18I	GGWCC	4 cut(s)	406, 1255, 1718, 2368
BmeRI	GACNNNNNGTC	1 cut(s)	1891
BmeT110I	CYCGRG	1 cut(s)	2349
BmgBI	CACGTC	2 cut(s)	91, 481
BmgT120I	GGNCC	6 cut(s)	7, 406, 1255, 1700, 1718, 2368
BmiI	GGNNCC	8 cut(s)	298, 694, 715, 1257, 1432, 1616, 1719, 2209
BmsI	GCATC	1 cut(s)	2047
BoxI	GACNNNNGTC	2 cut(s)	2133, 2366
BpiI	GAAGAC	2 cut(s)	1333, 1500
BplI	GAGNNNNNCTC	8 cut(s)	198, 230, 1456, 1488, 1458, 1490, 1526, 1558
BpmI	CTGGAG	6 cut(s)	377, 711, 1052, 1434, 2093, 2184
Bpu14I	TTCGAA	2 cut(s)	271, 927
BpuEI	CTTGAG	4 cut(s)	134, 288, 910, 2152
BpuMI	CCSGG	5 cut(s)	266, 508, 718, 2350, 2351
BsaHI	GRCGYC	3 cut(s)	390, 441, 504
BsaJI	CCNNGG	7 cut(s)	111, 429, 507, 1525, 2287, 2349, 2510
BsaXI	ACNNNNNCTCC	8 cut(s)	107, 137, 684, 714, 1056, 1086, 2066, 2096
Bsc4I	CCNNNNNNNGG	6 cut(s)	415, 418, 513, 1611, 1655, 2276
Bse1I	ACTGG	4 cut(s)	360, 633, 1451, 2167
Bse3DI	GCAATG	4 cut(s)	875, 1321, 2211, 2568
BseBI	CCWGG	5 cut(s)	113, 727, 1526, 2072, 2512
BseDI	CCNNGG	7 cut(s)	111, 429, 507, 1525, 2287, 2349, 2510
BseGI	GGATG	7 cut(s)	249, 1601, 1819, 1987, 2253, 2395, 2520
BseLI	CCNNNNNNNGG	6 cut(s)	415, 418, 513, 1611, 1655, 2276
BseMI	GCAATG	4 cut(s)	875, 1321, 2211, 2568
BseMII	CTCAG	3 cut(s)	629, 1260, 2355
BseNI	ACTGG	4 cut(s)	360, 633, 1451, 2167
BseXI	GCAGC	6 cut(s)	1164, 2037, 2203, 2332, 2417, 2585
BseYI	CCCAGC	2 cut(s)	1180, 2576
Bsh1236I	CGCG	2 cut(s)	449, 524
BshFI	GGCC	4 cut(s)	9, 476, 1010, 1701
BshNI	GGYRCC	2 cut(s)	1430, 1614
BsiHKAI	GWGCWC	1 cut(s)	1268
BsiHKCI	CYCGRG	1 cut(s)	2349
BsiSI	CCGG	6 cut(s)	266, 294, 507, 718, 793, 2350
BsiWI	CGTACG	1 cut(s)	254
BslFI	GGGAC	4 cut(s)	524, 1156, 1731, 1998
BslI	CCNNNNNNNGG	6 cut(s)	415, 418, 513, 1611, 1655, 2276
BsmAI	GTCTC	7 cut(s)	172, 590, 794, 1461, 1635, 1770, 1940
BsmBI	CGTCTC	1 cut(s)	172
BsmFI	GGGAC	4 cut(s)	524, 1156, 1731, 1998
BsmI	GAATGC	2 cut(s)	1093, 2641
BsnI	GGCC	4 cut(s)	9, 476, 1010, 1701
BsoBI	CYCGRG	1 cut(s)	2349
Bsp119I	TTCGAA	2 cut(s)	271, 927
Bsp1286I	GDGCHC	2 cut(s)	318, 1268
Bsp143I	GATC	4 cut(s)	534, 1513, 2076, 2485
BspANI	GGCC	4 cut(s)	9, 476, 1010, 1701
BspCNI	CTCAG	3 cut(s)	630, 1261, 2356
BspFNI	CGCG	2 cut(s)	449, 524
BspLI	GGNNCC	8 cut(s)	298, 694, 715, 1257, 1432, 1616, 1719, 2209
BspQI	GCTCTTC	1 cut(s)	1256
BspT104I	TTCGAA	2 cut(s)	271, 927
BspT107I	GGYRCC	2 cut(s)	1430, 1614
BspTI	CTTAAG	3 cut(s)	902, 1936, 2621
BsrBI	CCGCTC	1 cut(s)	1981
BsrDI	GCAATG	4 cut(s)	875, 1321, 2211, 2568
BsrI	ACTGG	4 cut(s)	360, 633, 1451, 2167
BssECI	CCNNGG	7 cut(s)	111, 429, 507, 1525, 2287, 2349, 2510
BssMI	GATC	4 cut(s)	534, 1513, 2076, 2485
BssNI	GRCGYC	3 cut(s)	390, 441, 504
BssSI	CACGAG	1 cut(s)	1353
BssT1I	CCWWGG	1 cut(s)	2287
Bst2BI	CACGAG	1 cut(s)	1353
Bst2UI	CCWGG	5 cut(s)	113, 727, 1526, 2072, 2512
Bst4CI	ACNGT	9 cut(s)	259, 433, 788, 1018, 1150, 1161, 1564, 1667, 2106
Bst6I	CTCTTC	6 cut(s)	109, 333, 924, 1100, 1256, 1633
BstACI	GRCGYC	3 cut(s)	390, 441, 504
BstAFI	CTTAAG	3 cut(s)	902, 1936, 2621
BstBI	TTCGAA	2 cut(s)	271, 927
BstC8I	GCNNGC	6 cut(s)	7, 663, 798, 960, 1699, 2445
BstDEI	CTNAG	7 cut(s)	638, 666, 1269, 1653, 2007, 2364, 2502
BstDSI	CCRYGG	1 cut(s)	429
BstENI	CCTNNNNNAGG	1 cut(s)	1609
BstF5I	GGATG	7 cut(s)	249, 1601, 1819, 1987, 2253, 2395, 2520
BstFNI	CGCG	2 cut(s)	449, 524
BstH2I	RGCGCY	4 cut(s)	455, 726, 767, 1031
BstHHI	GCGC	7 cut(s)	400, 454, 725, 766, 958, 1030, 2200
BstKTI	GATC	4 cut(s)	537, 1516, 2079, 2488
BstMAI	GTCTC	7 cut(s)	172, 590, 794, 1461, 1635, 1770, 1940
BstMBI	GATC	4 cut(s)	534, 1513, 2076, 2485
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 65, 449, 473, 482, 701, 749, 758
BstNI	CCWGG	5 cut(s)	113, 727, 1526, 2072, 2512
BstNSI	RCATGY	2 cut(s)	665, 962
BstPAI	GACNNNNGTC	2 cut(s)	2133, 2366
BstSFI	CTRYAG	2 cut(s)	1633, 2052
BstUI	CGCG	2 cut(s)	449, 524
BstV1I	GCAGC	6 cut(s)	1164, 2037, 2203, 2332, 2417, 2585
BstV2I	GAAGAC	2 cut(s)	1333, 1500
BstX2I	RGATCY	1 cut(s)	2076
BstXI	CCANNNNNNTGG	1 cut(s)	1441
BstYI	RGATCY	1 cut(s)	2076
BsuI	GTATCC	1 cut(s)	1438
BsuRI	GGCC	4 cut(s)	9, 476, 1010, 1701
BtgI	CCRYGG	1 cut(s)	429
BtrI	CACGTC	2 cut(s)	91, 481
BtsCI	GGATG	7 cut(s)	249, 1601, 1819, 1987, 2253, 2395, 2520
BtsI	GCAGTG	4 cut(s)	21, 825, 969, 1544
BtsIMutI	CAGTG	8 cut(s)	21, 353, 825, 969, 1023, 1544, 2060, 2111
Cac8I	GCNNGC	6 cut(s)	7, 663, 798, 960, 1699, 2445
CfoI	GCGC	7 cut(s)	400, 454, 725, 766, 958, 1030, 2200
Cfr13I	GGNCC	6 cut(s)	7, 406, 1255, 1700, 1718, 2368
Cfr9I	CCCGGG	1 cut(s)	2349
CseI	GACGC	3 cut(s)	379, 449, 512
Csp6I	GTAC	8 cut(s)	255, 385, 517, 1157, 1350, 1615, 1965, 2256
CviAII	CATG	6 cut(s)	662, 959, 1427, 1477, 1588, 2640
CviQI	GTAC	8 cut(s)	255, 385, 517, 1157, 1350, 1615, 1965, 2256
DdeI	CTNAG	7 cut(s)	638, 666, 1269, 1653, 2007, 2364, 2502
DpnI	GATC	4 cut(s)	536, 1515, 2078, 2487
DpnII	GATC	4 cut(s)	534, 1513, 2076, 2485
DraI	TTTAAA	1 cut(s)	1609
DriI	GACNNNNNGTC	1 cut(s)	1891
Eam1104I	CTCTTC	6 cut(s)	109, 333, 924, 1100, 1256, 1633
Eam1105I	GACNNNNNGTC	1 cut(s)	1891
EarI	CTCTTC	6 cut(s)	109, 333, 924, 1100, 1256, 1633
EciI	GGCGGA	3 cut(s)	46, 97, 127
Ecl136II	GAGCTC	1 cut(s)	1266
Eco130I	CCWWGG	1 cut(s)	2287
Eco24I	GRGCYC	2 cut(s)	318, 1268
Eco47I	GGWCC	4 cut(s)	406, 1255, 1718, 2368
Eco53kI	GAGCTC	1 cut(s)	1266
Eco57I	CTGAAG	1 cut(s)	621
Eco88I	CYCGRG	1 cut(s)	2349
EcoICRI	GAGCTC	1 cut(s)	1266
EcoNI	CCTNNNNNAGG	1 cut(s)	1609
EcoO109I	RGGNCCY	1 cut(s)	2368
EcoRI	GAATTC	2 cut(s)	685, 2450
EcoRII	CCWGG	5 cut(s)	111, 725, 1524, 2070, 2510
EcoT14I	CCWWGG	1 cut(s)	2287
EcoT22I	ATGCAT	1 cut(s)	2641
EcoT38I	GRGCYC	2 cut(s)	318, 1268
ErhI	CCWWGG	1 cut(s)	2287
Esp3I	CGTCTC	1 cut(s)	172
FaeI	CATG	6 cut(s)	665, 962, 1430, 1480, 1591, 2643
FaqI	GGGAC	4 cut(s)	524, 1156, 1731, 1998
FatI	CATG	6 cut(s)	661, 958, 1426, 1476, 1587, 2639
FauI	CCCGC	2 cut(s)	478, 1974
FblI	GTMKAC	2 cut(s)	63, 1632
FokI	GGATG	7 cut(s)	236, 1588, 1826, 1974, 2260, 2402, 2527
FriOI	GRGCYC	2 cut(s)	318, 1268
FspBI	CTAG	8 cut(s)	546, 672, 876, 1323, 1575, 1869, 2372, 2402
FspI	TGCGCA	2 cut(s)	957, 2199
GlaI	GCGC	7 cut(s)	399, 453, 724, 765, 957, 1029, 2199
GsaI	CCCAGC	2 cut(s)	1184, 2580
GsuI	CTGGAG	6 cut(s)	377, 711, 1052, 1434, 2093, 2184
HaeII	RGCGCY	4 cut(s)	455, 726, 767, 1031
HaeIII	GGCC	4 cut(s)	9, 476, 1010, 1701
HapII	CCGG	6 cut(s)	266, 294, 507, 718, 793, 2350
HgaI	GACGC	3 cut(s)	379, 449, 512
HhaI	GCGC	7 cut(s)	400, 454, 725, 766, 958, 1030, 2200
Hin1I	GRCGYC	3 cut(s)	390, 441, 504
Hin1II	CATG	6 cut(s)	665, 962, 1430, 1480, 1591, 2643
Hin6I	GCGC	7 cut(s)	398, 452, 723, 764, 956, 1028, 2198
HinP1I	GCGC	7 cut(s)	398, 452, 723, 764, 956, 1028, 2198
HincII	GTYRAC	1 cut(s)	502
HindII	GTYRAC	1 cut(s)	502
HindIII	AAGCTT	3 cut(s)	886, 1337, 2009
HpaII	CCGG	6 cut(s)	266, 294, 507, 718, 793, 2350
HphI	GGTGA	8 cut(s)	544, 893, 1079, 1196, 1306, 1790, 2432, 2540
Hpy166II	GTNNAC	5 cut(s)	64, 429, 502, 1633, 2225
Hpy8I	GTNNAC	5 cut(s)	64, 429, 502, 1633, 2225
Hpy99I	CGWCG	3 cut(s)	74, 449, 482
HpyCH4III	ACNGT	9 cut(s)	259, 433, 788, 1018, 1150, 1161, 1564, 1667, 2106
HpyCH4IV	ACGT	2 cut(s)	90, 480
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 65, 449, 473, 482, 701, 749, 758
HpyF3I	CTNAG	7 cut(s)	638, 666, 1269, 1653, 2007, 2364, 2502
HpySE526I	ACGT	2 cut(s)	90, 480
Hsp92I	GRCGYC	3 cut(s)	390, 441, 504
Hsp92II	CATG	6 cut(s)	665, 962, 1430, 1480, 1591, 2643
HspAI	GCGC	7 cut(s)	398, 452, 723, 764, 956, 1028, 2198
KpnI	GGTACC	1 cut(s)	1618
Kzo9I	GATC	4 cut(s)	534, 1513, 2076, 2485
LguI	GCTCTTC	1 cut(s)	1256
LmnI	GCTCC	9 cut(s)	240, 302, 679, 692, 720, 979, 1037, 1237, 2317
Lsp1109I	GCAGC	6 cut(s)	1164, 2037, 2203, 2332, 2417, 2585
LweI	GCATC	1 cut(s)	2047
MaeI	CTAG	8 cut(s)	546, 672, 876, 1323, 1575, 1869, 2372, 2402
MaeII	ACGT	2 cut(s)	90, 480
MaeIII	GTNAC	5 cut(s)	91, 997, 1355, 2100, 2470
MalI	GATC	4 cut(s)	536, 1515, 2078, 2487
MbiI	CCGCTC	1 cut(s)	1981
MboI	GATC	4 cut(s)	534, 1513, 2076, 2485
MflI	RGATCY	1 cut(s)	2076
MhlI	GDGCHC	2 cut(s)	318, 1268
MlyI	GAGTC	8 cut(s)	33, 95, 114, 841, 1323, 1490, 2143, 2175
MmeI	TCCRAC	6 cut(s)	7, 711, 786, 1200, 1791, 1803
Mph1103I	ATGCAT	1 cut(s)	2641
MslI	CAYNNNNRTG	2 cut(s)	1016, 1475
MspA1I	CMGCKG	1 cut(s)	2576
MspCI	CTTAAG	3 cut(s)	902, 1936, 2621
MspI	CCGG	6 cut(s)	266, 294, 507, 718, 793, 2350
Mva1269I	GAATGC	2 cut(s)	1093, 2641
MvaI	CCWGG	5 cut(s)	113, 727, 1526, 2072, 2512
MvnI	CGCG	2 cut(s)	449, 524
MwoI	GCNNNNNNNGC	8 cut(s)	11, 65, 449, 473, 482, 701, 749, 758
NciI	CCSGG	5 cut(s)	266, 508, 718, 2350, 2351
NdeII	GATC	4 cut(s)	534, 1513, 2076, 2485
NlaIII	CATG	6 cut(s)	665, 962, 1430, 1480, 1591, 2643
NlaIV	GGNNCC	8 cut(s)	298, 694, 715, 1257, 1432, 1616, 1719, 2209
NmuCI	GTSAC	5 cut(s)	91, 997, 1355, 2100, 2470
NsbI	TGCGCA	2 cut(s)	957, 2199
NsiI	ATGCAT	1 cut(s)	2641
NspI	RCATGY	2 cut(s)	665, 962
NspV	TTCGAA	2 cut(s)	271, 927
PaeI	GCATGC	2 cut(s)	665, 962
PciSI	GCTCTTC	1 cut(s)	1256
PcsI	WCGNNNNNNNCGW	4 cut(s)	96, 324, 333, 617
PctI	GAATGC	2 cut(s)	1093, 2641
PfeI	GAWTC	7 cut(s)	200, 273, 371, 616, 2338, 2498, 2506
Pfl23II	CGTACG	1 cut(s)	254
PflFI	GACNNNGTC	1 cut(s)	443
PflMI	CCANNNNNTGG	1 cut(s)	2276
PfoI	TCCNGGA	1 cut(s)	716
PleI	GAGTC	8 cut(s)	32, 95, 114, 840, 1323, 1490, 2142, 2174
PpsI	GAGTC	8 cut(s)	32, 95, 114, 840, 1323, 1490, 2142, 2174
PpuMI	RGGWCCY	1 cut(s)	2368
PshAI	GACNNNNGTC	2 cut(s)	2133, 2366
Psp124BI	GAGCTC	1 cut(s)	1268
Psp5II	RGGWCCY	1 cut(s)	2368
Psp6I	CCWGG	5 cut(s)	111, 725, 1524, 2070, 2510
PspFI	CCCAGC	2 cut(s)	1180, 2576
PspGI	CCWGG	5 cut(s)	111, 725, 1524, 2070, 2510
PspLI	CGTACG	1 cut(s)	254
PspN4I	GGNNCC	8 cut(s)	298, 694, 715, 1257, 1432, 1616, 1719, 2209
PspPI	GGNCC	6 cut(s)	7, 406, 1255, 1700, 1718, 2368
PspPPI	RGGWCCY	1 cut(s)	2368
PsuI	RGATCY	1 cut(s)	2076
PsyI	GACNNNGTC	1 cut(s)	443
PvuII	CAGCTG	1 cut(s)	2576
RsaI	GTAC	8 cut(s)	256, 386, 518, 1158, 1351, 1616, 1966, 2257
RsaNI	GTAC	8 cut(s)	255, 385, 517, 1157, 1350, 1615, 1965, 2256
RseI	CAYNNNNRTG	2 cut(s)	1016, 1475
SacI	GAGCTC	1 cut(s)	1268
SapI	GCTCTTC	1 cut(s)	1256
Sau3AI	GATC	4 cut(s)	534, 1513, 2076, 2485
Sau96I	GGNCC	6 cut(s)	7, 406, 1255, 1700, 1718, 2368
SchI	GAGTC	8 cut(s)	33, 95, 114, 841, 1323, 1490, 2143, 2175
SduI	GDGCHC	2 cut(s)	318, 1268
SfaNI	GCATC	1 cut(s)	2047
SfcI	CTRYAG	2 cut(s)	1633, 2052
SfuI	TTCGAA	2 cut(s)	271, 927
SinI	GGWCC	4 cut(s)	406, 1255, 1718, 2368
SmaI	CCCGGG	1 cut(s)	2351
SmiMI	CAYNNNNRTG	2 cut(s)	1016, 1475
SmlI	CTYRAG	7 cut(s)	149, 303, 889, 902, 1936, 2131, 2621
SmoI	CTYRAG	7 cut(s)	149, 303, 889, 902, 1936, 2131, 2621
SphI	GCATGC	2 cut(s)	665, 962
SspI	AATATT	1 cut(s)	1771
SspMI	CTAG	8 cut(s)	546, 672, 876, 1323, 1575, 1869, 2372, 2402
SstI	GAGCTC	1 cut(s)	1268
StyI	CCWWGG	1 cut(s)	2287
TaaI	ACNGT	9 cut(s)	259, 433, 788, 1018, 1150, 1161, 1564, 1667, 2106
TaiI	ACGT	2 cut(s)	93, 483
TaqII	GACCGA	1 cut(s)	350
TauI	GCSGC	8 cut(s)	143, 281, 284, 422, 452, 524, 761, 764
TfiI	GAWTC	7 cut(s)	200, 273, 371, 616, 2338, 2498, 2506
TscAI	CASTG	8 cut(s)	21, 360, 825, 969, 1023, 1551, 2067, 2111
TseFI	GTSAC	5 cut(s)	91, 997, 1355, 2100, 2470
TseI	GCWGC	6 cut(s)	1177, 2025, 2216, 2320, 2405, 2573
Tsp45I	GTSAC	5 cut(s)	91, 997, 1355, 2100, 2470
TspDTI	ATGAA	4 cut(s)	1332, 1604, 2037, 2190
TspGWI	ACGGA	2 cut(s)	181, 242
TspMI	CCCGGG	1 cut(s)	2349
TspRI	CASTG	8 cut(s)	21, 360, 825, 969, 1023, 1551, 2067, 2111
Tth111I	GACNNNGTC	1 cut(s)	443
Van91I	CCANNNNNTGG	1 cut(s)	2276
Vha464I	CTTAAG	3 cut(s)	902, 1936, 2621
VpaK11BI	GGWCC	4 cut(s)	406, 1255, 1718, 2368
XagI	CCTNNNNNAGG	1 cut(s)	1609
XapI	RAATTY	5 cut(s)	289, 624, 685, 1850, 2450
XceI	RCATGY	2 cut(s)	665, 962
XcmI	CCANNNNNNNNNTGG	1 cut(s)	307
XmaI	CCCGGG	1 cut(s)	2349
XmiI	GTMKAC	2 cut(s)	63, 1632
XspI	CTAG	8 cut(s)	546, 672, 876, 1323, 1575, 1869, 2372, 2402
Zsp2I	ATGCAT	1 cut(s)	2641

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.