Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0008801

Physical Location & Seq

Genomic Coordinates Reverse (-)

361675 .. 371570

Gene Structure 9896 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g00320.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2646 bp

ATGGCGGAGCTGCCAATGATAACAGTAGGAGGCAAGGGCTCGTCTCTGTCCTCCTCCTCCGTCTGCTCCATCGCCAAGGGCCTTGCTCATCTGCGCACCGACTCGTCGGCGCTCAATCGGCTCGACTCCTCCTCCTCCTCCTCCTCCTCCTCATCGCCCCTCGCCCACAATCTCGTCTCTCTCCTCCCCTCCCTCCCAACTGTCGAAGAATCCAGAGCCTCCCTCGTCGTCCTCCTCTGCAAGCTTTTATCTCTCTCCGGTTCCCCCAACGTCCGTACGGTTCTTGCGGTTCGACTCGCCGAAGCCATCAATTCCCGAGACTTGGAGCTCGGGTCGCTCGTTTTGACCGAAGAGGAGGCTCTTGCGTTGGAGGAATTCAAGTTATCCTCAGCTTTGTGCGGGATATGTGCGCTTCTGGACCACCAGTCCGCCGCTTTGTCTACTGTTTCCGATGCGGTGGCAGCGATGTCTTGCGAGGCGTTGAAGGCCGATGTAAGGGCGTTTAATTCGATGGATTTGGGGGATGGGTACGCAGCGAAGGAGGTCATTGCTGTGGCCAGTGATTTGAAGGTGCTGCTCAATGGGTCTAAATTAGTGGGTAAGCTTGAAATTGAAGCGGTATCGGAAATCCCACAAATTCACGCGAGTTTGAGAGAGCAGGTGAAATCTTTGCACTCCAAGACTCGAACGGAGCTGAATTCTGGCGGGAAAGTAGTTACTCCTAGGACAGTGGTGACCACATTGTTGTCACTGGCGTCGGCGCTTCATCACTTGGGTGACCTTAGTTTGTCCCGTGCGAAGATGATTGTGGATGCGGTGGGGAGTGAAGATTTGAGGTCGAGTTTGGTGGCATTGTTTGAGAAAAAATGCCCAAGTGGTGAAAGCTTGATTAGTGGGTTCAAGTTGGTTTCCCATTTGGGATCTGACGCGGAAGTGAATTATGATAATTTTGCTCACGAAGTGAATCTGTTAATGGGAATTGTGTGGAAGATTGTGACTTGGGAGGCAATAACGGCATTTGTGGTGCTCGAGGGAGCTGAGTTGAATGTGAAGAAGAGTGAAGGTAGTGAAGTGAATGGAGGAGGGAATGTGAGAGTAGAGAAGAAGAGTGAGAAGAAGAAGAAGGTGGTTTTGGGTAAGGGGACTAGTGTTGTAGTACAGTTGATTAAAGATAGGTTGCAGGGCAAGGGAGGAAATGCTGTTGATAGTTTGGGGTTGTTGGTAATTTGGGCGGACGAGCTTTCATCGTTTTTGGACCCCAAGGACCTGGAATTTGATAGTTTGTTGAACAAGGTGAAGGAGATAGTGGAAAGCAATGAGAGTAGAAGACTCCCAAAGCTTCCAAAGGGTACTCGTGACTTCGCGAAAGAACAAATGGTAGTAAGAAAGACAGCATTTTCGATTATTGAAGAGGTCTTTGAGAGGCACGGTGCGATGGCCCTTGACACTCCAGTTTTTGAATTGAGAGAAACCCTCATGGGAAAATATGGGGAAGATTCAAAATTGATTTATGATCTTGCTGACCAGGGAGGAGAGCTTTTATCACTGCGATATGATCTTACTGTTCCATTTGCTAGATATGTAGCTATGAATGGTATCACATCTTTCAAAAGGTACCAAATAGCAAAGGTTTATAGAAGAGACAATCCATCCAAAGGACGATATCGTGAATTTTACCAATGCGACTTTGATATTGCTGGCCAATTTGAAAAAATGGGTCCAGATTTTGAGGTTATTAAGATTTTGACAGAACTTCTTGATGAGCTGAATATTGGAGATTATGAGATTAAATTGAATCACCGAAAGTTGTTGGATGGAATGTTGGAAATCTGTGGAGTGCCTCCTGAAAAATTCAGAACTATTTGTTCAAGTATTGACAAGTTAGACAAGCAGCCTTTTGAGCAGATAAAAGGGGAAATGGTGGAGGAGAAGGGCTTAAGTGTTGAGACAGCTGACAAAATTGGTGCTTTTGTAAAAGAGCATGGTCATCCTTTGGAATTGTTAAGTAAGCTTAAACAGGAGGGCAGCAAGTTCTTGGAAAGCAGTGCATCTATAGATGCGTTGAATGACCTGGAGATCTTATTTAATGCTTTGCAAAAATCAAAGTGCATAGGAAAAGTGGTTTTTGACTTAAGTCTTGCAAGGGGTCTCGATTATTATACGGGAGTAATATTTGAAGCTGTTTTTAGGGGGGGTGCCCAGGTTGGTTCAATTGCTGCTGGTGGACGCTACGACAACCTTATAGGAATGTTTGGTACAAAGCAGGTTCCAGCTGTTGGTGTCAGCCTTGGAATTGAACGAGTATTTAACATAATGGAGCAGCTTAACAAAGACCAGAATCAGAGAACACGAGCAACGAAGACTGAAGTCCTAGTGAGTATATTGGGGGATGATTTAGGACGAGCAGCAGAGCTATCAACGGAGTTGTGGGACGTAAAAGTGAAAGCAGAGTACTCGGTGAATAAAAGAGTGACGAAACACTTTGATCGATCAAAGGAATCTTCGATCCCTTGGATGATAATTGAGGGTGAACGGGAGCGGAATGATAATGTTGTGAGATTGAAAAACATGGAGGCTGGCGAGGAAATCACAATTTCTAGAGATACAATTGTGGAAGAAGTTCAAAAACGGTTGAGTTCGTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0019538 GO:0032543 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:0140053 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

HGTP_anticodon Lyase_aromatic tRNA-synt_His

Protein Analysis

882

Amino Acids

96.37

Weight (kDa)

5.71

Isoelectric Point (pI)

35.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008801)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02760 AT3G02760
fragaria_vesca	FvH4_2g00780 FvH4_2g00780 FvH4_2g00780 FvH4_2g00780 FvH4_3g14280 FvH4_3g25240
malus_domestica	MD05G1003500.v1.1 MD10G1004600.v1.1
prunus_persica	Prupe.8G006900_v2.0.a1
pyrus_communis	pycom05g00320 pycom10g00360
rosa_chinensis	RchiOBHm_Chr6g0251201
rosa_laevigata	RLG00000015474
rosa_multiflora	Rmu_sc0004077.1_g000009
rosa_roxburghii	Rroxscaffold_7G00216930
rosa_rugosa	Rorug05G0500700.1
rosa_samantha	Rh6AG010100 Rh6BG001900 Rh6CG007000 Rh6DG007500
rosa_wichuraiana	Rw6G000990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	649
Acc16I	TGCGCA	1 cut(s)	95
Acc36I	ACCTGC	2 cut(s)	649, 2254
Acc65I	GGTACC	1 cut(s)	1614
AccB1I	GGYRCC	2 cut(s)	1614, 2195
AccB7I	CCANNNNNTGG	1 cut(s)	2276
AccBSI	CCGCTC	1 cut(s)	2539
AccI	GTMKAC	1 cut(s)	440
AccII	CGCG	3 cut(s)	644, 929, 1364
AclWI	GGATC	2 cut(s)	928, 2500
AcoI	YGGCCR	2 cut(s)	555, 1699
AcsI	RAATTY	6 cut(s)	374, 636, 697, 1271, 1670, 1850
AcuI	CTGAAG	1 cut(s)	2385
AcyI	GRCGYC	1 cut(s)	755
AdeI	CACNNNGTG	1 cut(s)	961
AfaI	GTAC	7 cut(s)	277, 530, 1158, 1351, 1616, 2257, 2453
AfiI	CCNNNNNNNGG	4 cut(s)	322, 495, 1655, 2276
AflII	CTTAAG	2 cut(s)	1936, 2131
AhdI	GACNNNNNGTC	1 cut(s)	424
AhlI	ACTAGT	1 cut(s)	1145
AjnI	CCWGG	4 cut(s)	1266, 1524, 2070, 2199
AjuI	GAANNNNNNNTTGG	2 cut(s)	1115, 1147
AleI	CACNNNNGTG	1 cut(s)	774
Alw21I	GWGCWC	2 cut(s)	330, 1029
Alw26I	GTCTC	6 cut(s)	48, 181, 312, 1635, 1940, 2153
AlwI	GGATC	2 cut(s)	928, 2500
Ama87I	CYCGRG	3 cut(s)	315, 329, 1028
AoxI	GGCC	5 cut(s)	79, 486, 555, 1437, 1699
ApeKI	GCWGC	9 cut(s)	10, 461, 533, 574, 1891, 2025, 2216, 2320, 2405
ApoI	RAATTY	6 cut(s)	374, 636, 697, 1271, 1670, 1850
ArsI	GACNNNNNNTTYG	4 cut(s)	1256, 1288, 1381, 1413
Asp700I	GAANNNNTTC	1 cut(s)	2619
Asp718I	GGTACC	1 cut(s)	1614
AspA2I	CCTAGG	1 cut(s)	722
AspLEI	GCGC	4 cut(s)	96, 112, 412, 763
AspS9I	GGNCC	6 cut(s)	79, 418, 1255, 1264, 1438, 1718
AsuHPI	GGTGA	8 cut(s)	673, 745, 788, 890, 1306, 1790, 2470, 2540
AvaI	CYCGRG	3 cut(s)	315, 329, 1028
AvaII	GGWCC	4 cut(s)	418, 1255, 1264, 1718
AvrII	CCTAGG	1 cut(s)	722
BaeGI	GKGCMC	1 cut(s)	2200
BaeI	ACNNNNGTAYC	2 cut(s)	2595, 2628
BalI	TGGCCA	2 cut(s)	557, 1701
BanI	GGYRCC	2 cut(s)	1614, 2195
BanII	GRGCYC	2 cut(s)	41, 330
BauI	CACGAG	2 cut(s)	1353, 2349
BbsI	GAAGAC	2 cut(s)	1333, 2366
Bbv12I	GWGCWC	2 cut(s)	330, 1029
BbvCI	CCTCAGC	1 cut(s)	388
BbvI	GCAGC	8 cut(s)	473, 545, 561, 1903, 2037, 2203, 2332, 2417
BccI	CCATC	7 cut(s)	77, 314, 505, 518, 1429, 1657, 1808
BceAI	ACGGC	1 cut(s)	1029
BcgI	CGANNNNNNTGC	2 cut(s)	2436, 2470
BciT130I	CCWGG	4 cut(s)	1268, 1526, 2072, 2201
BcoDI	GTCTC	6 cut(s)	48, 181, 312, 1635, 1940, 2153
BcuI	ACTAGT	1 cut(s)	1145
BfaI	CTAG	5 cut(s)	723, 1146, 1575, 2372, 2598
BfmI	CTRYAG	1 cut(s)	2052
BfoI	RGCGCY	2 cut(s)	113, 764
BfrI	CTTAAG	2 cut(s)	1936, 2131
BfuAI	ACCTGC	2 cut(s)	649, 2254
BglII	AGATCT	1 cut(s)	2076
BlnI	CCTAGG	1 cut(s)	722
BmcAI	AGTACT	1 cut(s)	2453
Bme1390I	CCNGG	4 cut(s)	1268, 1526, 2072, 2201
Bme18I	GGWCC	4 cut(s)	418, 1255, 1264, 1718
BmeRI	GACNNNNNGTC	1 cut(s)	424
BmeT110I	CYCGRG	3 cut(s)	315, 329, 1028
BmgT120I	GGNCC	6 cut(s)	79, 418, 1255, 1264, 1438, 1718
BmiI	GGNNCC	6 cut(s)	262, 1257, 1616, 1719, 2197, 2268
BmrFI	CCNGG	4 cut(s)	1268, 1526, 2072, 2201
BmsI	GCATC	4 cut(s)	442, 802, 2047, 2057
BoxI	GACNNNNGTC	2 cut(s)	2133, 2366
BpiI	GAAGAC	2 cut(s)	1333, 2366
BplI	GAGNNNNNCTC	4 cut(s)	207, 239, 1458, 1490
BpmI	CTGGAG	2 cut(s)	1434, 2093
Bpu10I	CCTNAGC	1 cut(s)	388
Bsa29I	ATCGAT	1 cut(s)	2488
BsaHI	GRCGYC	1 cut(s)	755
BsaI	GGTCTC	1 cut(s)	2153
BsaJI	CCNNGG	7 cut(s)	75, 722, 1260, 1525, 2199, 2287, 2510
BsaWI	WCCGGW	1 cut(s)	257
BsaXI	ACNNNNNCTCC	6 cut(s)	116, 146, 317, 347, 1074, 1104
Bsc4I	CCNNNNNNNGG	4 cut(s)	322, 495, 1655, 2276
Bse1I	ACTGG	4 cut(s)	424, 558, 756, 1451
Bse3DI	GCAATG	2 cut(s)	546, 1321
BseBI	CCWGG	4 cut(s)	1268, 1526, 2072, 2201
BseCI	ATCGAT	1 cut(s)	2488
BseDI	CCNNGG	7 cut(s)	75, 722, 1260, 1525, 2199, 2287, 2510
BseGI	GGATG	7 cut(s)	529, 817, 1649, 1819, 1987, 2395, 2520
BseLI	CCNNNNNNNGG	4 cut(s)	322, 495, 1655, 2276
BseMI	GCAATG	2 cut(s)	546, 1321
BseMII	CTCAG	2 cut(s)	402, 1029
BseNI	ACTGG	4 cut(s)	424, 558, 756, 1451
BseSI	GKGCMC	1 cut(s)	2200
BseXI	GCAGC	8 cut(s)	473, 545, 561, 1903, 2037, 2203, 2332, 2417
Bsh1236I	CGCG	3 cut(s)	644, 929, 1364
BshFI	GGCC	5 cut(s)	81, 488, 557, 1439, 1701
BshNI	GGYRCC	2 cut(s)	1614, 2195
BshVI	ATCGAT	1 cut(s)	2488
BsiHKAI	GWGCWC	2 cut(s)	330, 1029
BsiHKCI	CYCGRG	3 cut(s)	315, 329, 1028
BsiSI	CCGG	1 cut(s)	258
BsiWI	CGTACG	1 cut(s)	275
BslFI	GGGAC	3 cut(s)	775, 1156, 2444
BslI	CCNNNNNNNGG	4 cut(s)	322, 495, 1655, 2276
BsmAI	GTCTC	6 cut(s)	48, 181, 312, 1635, 1940, 2153
BsmBI	CGTCTC	2 cut(s)	48, 181
BsmFI	GGGAC	3 cut(s)	775, 1156, 2444
BsnI	GGCC	5 cut(s)	81, 488, 557, 1439, 1701
Bso31I	GGTCTC	1 cut(s)	2153
BsoBI	CYCGRG	3 cut(s)	315, 329, 1028
Bsp1286I	GDGCHC	4 cut(s)	41, 330, 1029, 2200
Bsp143I	GATC	7 cut(s)	920, 1513, 1555, 2076, 2485, 2489, 2505
Bsp68I	TCGCGA	1 cut(s)	1364
BspANI	GGCC	5 cut(s)	81, 488, 557, 1439, 1701
BspCNI	CTCAG	2 cut(s)	401, 1030
BspDI	ATCGAT	1 cut(s)	2488
BspFNI	CGCG	3 cut(s)	644, 929, 1364
BspLI	GGNNCC	6 cut(s)	262, 1257, 1616, 1719, 2197, 2268
BspMI	ACCTGC	2 cut(s)	649, 2254
BspPI	GGATC	2 cut(s)	928, 2500
BspT107I	GGYRCC	2 cut(s)	1614, 2195
BspTI	CTTAAG	2 cut(s)	1936, 2131
BspTNI	GGTCTC	1 cut(s)	2153
BsrBI	CCGCTC	1 cut(s)	2539
BsrDI	GCAATG	2 cut(s)	546, 1321
BsrI	ACTGG	4 cut(s)	424, 558, 756, 1451
BssECI	CCNNGG	7 cut(s)	75, 722, 1260, 1525, 2199, 2287, 2510
BssMI	GATC	7 cut(s)	920, 1513, 1555, 2076, 2485, 2489, 2505
BssNI	GRCGYC	1 cut(s)	755
BssSI	CACGAG	2 cut(s)	1353, 2349
BssT1I	CCWWGG	5 cut(s)	75, 722, 1260, 2287, 2510
Bst2BI	CACGAG	2 cut(s)	1353, 2349
Bst2UI	CCWGG	4 cut(s)	1268, 1526, 2072, 2201
Bst4CI	ACNGT	9 cut(s)	25, 202, 280, 445, 730, 1161, 1430, 1564, 2631
Bst6I	CTCTTC	5 cut(s)	345, 1049, 1100, 1404, 1633
BstACI	GRCGYC	1 cut(s)	755
BstAFI	CTTAAG	2 cut(s)	1936, 2131
BstC8I	GCNNGC	3 cut(s)	242, 1699, 2578
BstDEI	CTNAG	3 cut(s)	388, 782, 1038
BstEII	GGTNACC	2 cut(s)	733, 776
BstF5I	GGATG	7 cut(s)	529, 817, 1649, 1819, 1987, 2395, 2520
BstFNI	CGCG	3 cut(s)	644, 929, 1364
BstH2I	RGCGCY	2 cut(s)	113, 764
BstHHI	GCGC	4 cut(s)	96, 112, 412, 763
BstKTI	GATC	7 cut(s)	923, 1516, 1558, 2079, 2488, 2492, 2508
BstMAI	GTCTC	6 cut(s)	48, 181, 312, 1635, 1940, 2153
BstMBI	GATC	7 cut(s)	920, 1513, 1555, 2076, 2485, 2489, 2505
BstMWI	GCNNNNNNNGC	6 cut(s)	118, 334, 461, 485, 1013, 1900
BstNI	CCWGG	4 cut(s)	1268, 1526, 2072, 2201
BstPAI	GACNNNNGTC	2 cut(s)	2133, 2366
BstPI	GGTNACC	2 cut(s)	733, 776
BstSCI	CCNGG	4 cut(s)	1266, 1524, 2070, 2199
BstSFI	CTRYAG	1 cut(s)	2052
BstSLI	GKGCMC	1 cut(s)	2200
BstUI	CGCG	3 cut(s)	644, 929, 1364
BstV1I	GCAGC	8 cut(s)	473, 545, 561, 1903, 2037, 2203, 2332, 2417
BstV2I	GAAGAC	2 cut(s)	1333, 2366
BstX2I	RGATCY	2 cut(s)	920, 2076
BstXI	CCANNNNNNTGG	1 cut(s)	1267
BstYI	RGATCY	2 cut(s)	920, 2076
Bsu15I	ATCGAT	1 cut(s)	2488
BsuRI	GGCC	5 cut(s)	81, 488, 557, 1439, 1701
BsuTUI	ATCGAT	1 cut(s)	2488
BtgZI	GCGATG	4 cut(s)	55, 138, 479, 1448
BtsCI	GGATG	7 cut(s)	529, 817, 1649, 1819, 1987, 2395, 2520
BtsI	GCAGTG	2 cut(s)	1544, 2050
BtsIMutI	CAGTG	5 cut(s)	565, 735, 749, 1544, 2050
BtuMI	TCGCGA	1 cut(s)	1364
BveI	ACCTGC	2 cut(s)	649, 2254
Cac8I	GCNNGC	3 cut(s)	242, 1699, 2578
CfoI	GCGC	4 cut(s)	96, 112, 412, 763
Cfr13I	GGNCC	6 cut(s)	79, 418, 1255, 1264, 1438, 1718
ClaI	ATCGAT	1 cut(s)	2488
CseI	GACGC	3 cut(s)	744, 935, 2235
Csp6I	GTAC	7 cut(s)	276, 529, 1157, 1350, 1615, 2256, 2452
CviAII	CATG	3 cut(s)	1477, 1982, 2569
CviQI	GTAC	7 cut(s)	276, 529, 1157, 1350, 1615, 2256, 2452
DdeI	CTNAG	3 cut(s)	388, 782, 1038
DpnI	GATC	7 cut(s)	922, 1515, 1557, 2078, 2487, 2491, 2507
DpnII	GATC	7 cut(s)	920, 1513, 1555, 2076, 2485, 2489, 2505
DraIII	CACNNNGTG	1 cut(s)	961
DriI	GACNNNNNGTC	1 cut(s)	424
EaeI	YGGCCR	2 cut(s)	555, 1699
Eam1104I	CTCTTC	5 cut(s)	345, 1049, 1100, 1404, 1633
Eam1105I	GACNNNNNGTC	1 cut(s)	424
EarI	CTCTTC	5 cut(s)	345, 1049, 1100, 1404, 1633
EciI	GGCGGA	3 cut(s)	20, 418, 1247
Ecl136II	GAGCTC	1 cut(s)	328
Eco130I	CCWWGG	5 cut(s)	75, 722, 1260, 2287, 2510
Eco24I	GRGCYC	2 cut(s)	41, 330
Eco31I	GGTCTC	1 cut(s)	2153
Eco32I	GATATC	1 cut(s)	1664
Eco47I	GGWCC	4 cut(s)	418, 1255, 1264, 1718
Eco53kI	GAGCTC	1 cut(s)	328
Eco57I	CTGAAG	1 cut(s)	2385
Eco88I	CYCGRG	3 cut(s)	315, 329, 1028
Eco91I	GGTNACC	2 cut(s)	733, 776
EcoICRI	GAGCTC	1 cut(s)	328
EcoO109I	RGGNCCY	2 cut(s)	79, 1264
EcoO65I	GGTNACC	2 cut(s)	733, 776
EcoRI	GAATTC	2 cut(s)	374, 697
EcoRII	CCWGG	4 cut(s)	1266, 1524, 2070, 2199
EcoRV	GATATC	1 cut(s)	1664
EcoT14I	CCWWGG	5 cut(s)	75, 722, 1260, 2287, 2510
EcoT38I	GRGCYC	2 cut(s)	41, 330
ErhI	CCWWGG	5 cut(s)	75, 722, 1260, 2287, 2510
Esp3I	CGTCTC	2 cut(s)	48, 181
FaeI	CATG	3 cut(s)	1480, 1985, 2572
FaqI	GGGAC	3 cut(s)	775, 1156, 2444
FatI	CATG	3 cut(s)	1476, 1981, 2568
FauI	CCCGC	2 cut(s)	392, 698
FblI	GTMKAC	1 cut(s)	440
FokI	GGATG	7 cut(s)	536, 824, 1636, 1826, 1974, 2402, 2527
FriOI	GRGCYC	2 cut(s)	41, 330
FspBI	CTAG	5 cut(s)	723, 1146, 1575, 2372, 2598
FspI	TGCGCA	1 cut(s)	95
GlaI	GCGC	4 cut(s)	95, 111, 411, 762
GsuI	CTGGAG	2 cut(s)	1434, 2093
HaeII	RGCGCY	2 cut(s)	113, 764
HaeIII	GGCC	5 cut(s)	81, 488, 557, 1439, 1701
HapII	CCGG	1 cut(s)	258
HgaI	GACGC	3 cut(s)	744, 935, 2235
HhaI	GCGC	4 cut(s)	96, 112, 412, 763
Hin1I	GRCGYC	1 cut(s)	755
Hin1II	CATG	3 cut(s)	1480, 1985, 2572
Hin6I	GCGC	4 cut(s)	94, 110, 410, 761
HinP1I	GCGC	4 cut(s)	94, 110, 410, 761
HindIII	AAGCTT	5 cut(s)	242, 602, 883, 1337, 2009
HpaII	CCGG	1 cut(s)	258
HphI	GGTGA	8 cut(s)	673, 745, 788, 890, 1306, 1790, 2470, 2540
Hpy166II	GTNNAC	3 cut(s)	441, 2225, 2531
Hpy188I	TCNGA	5 cut(s)	451, 625, 925, 1856, 2343
Hpy8I	GTNNAC	3 cut(s)	441, 2225, 2531
Hpy99I	CGWCG	3 cut(s)	109, 230, 760
HpyAV	CCTTC	7 cut(s)	478, 532, 562, 1055, 1117, 1291, 1924
HpyCH4III	ACNGT	9 cut(s)	25, 202, 280, 445, 730, 1161, 1430, 1564, 2631
HpyCH4IV	ACGT	2 cut(s)	270, 2433
HpyCH4V	TGCA	7 cut(s)	240, 673, 1180, 2048, 2095, 2109, 2141
HpyF10VI	GCNNNNNNNGC	6 cut(s)	118, 334, 461, 485, 1013, 1900
HpyF3I	CTNAG	3 cut(s)	388, 782, 1038
HpySE526I	ACGT	2 cut(s)	270, 2433
Hsp92I	GRCGYC	1 cut(s)	755
Hsp92II	CATG	3 cut(s)	1480, 1985, 2572
HspAI	GCGC	4 cut(s)	94, 110, 410, 761
KpnI	GGTACC	1 cut(s)	1618
Kzo9I	GATC	7 cut(s)	920, 1513, 1555, 2076, 2485, 2489, 2505
LmnI	GCTCC	7 cut(s)	7, 71, 325, 691, 1034, 2317, 2536
Lsp1109I	GCAGC	8 cut(s)	473, 545, 561, 1903, 2037, 2203, 2332, 2417
LweI	GCATC	4 cut(s)	442, 802, 2047, 2057
MaeI	CTAG	5 cut(s)	723, 1146, 1575, 2372, 2598
MaeII	ACGT	2 cut(s)	270, 2433
MaeIII	GTNAC	7 cut(s)	715, 733, 747, 776, 994, 1355, 2470
MalI	GATC	7 cut(s)	922, 1515, 1557, 2078, 2487, 2491, 2507
MbiI	CCGCTC	1 cut(s)	2539
MboI	GATC	7 cut(s)	920, 1513, 1555, 2076, 2485, 2489, 2505
MfeI	CAATTG	2 cut(s)	2211, 2607
MflI	RGATCY	2 cut(s)	920, 2076
MhlI	GDGCHC	4 cut(s)	41, 330, 1029, 2200
MlsI	TGGCCA	2 cut(s)	557, 1701
MluNI	TGGCCA	2 cut(s)	557, 1701
MlyI	GAGTC	5 cut(s)	95, 119, 288, 676, 1323
MmeI	TCCRAC	3 cut(s)	348, 1791, 1803
Mox20I	TGGCCA	2 cut(s)	557, 1701
MroXI	GAANNNNTTC	1 cut(s)	2619
MscI	TGGCCA	2 cut(s)	557, 1701
MslI	CAYNNNNRTG	2 cut(s)	551, 774
Msp20I	TGGCCA	2 cut(s)	557, 1701
MspA1I	CMGCKG	2 cut(s)	1952, 2273
MspCI	CTTAAG	2 cut(s)	1936, 2131
MspI	CCGG	1 cut(s)	258
MspR9I	CCNGG	4 cut(s)	1268, 1526, 2072, 2201
MunI	CAATTG	2 cut(s)	2211, 2607
MvaI	CCWGG	4 cut(s)	1268, 1526, 2072, 2201
MvnI	CGCG	3 cut(s)	644, 929, 1364
MwoI	GCNNNNNNNGC	6 cut(s)	118, 334, 461, 485, 1013, 1900
NdeII	GATC	7 cut(s)	920, 1513, 1555, 2076, 2485, 2489, 2505
NlaIII	CATG	3 cut(s)	1480, 1985, 2572
NlaIV	GGNNCC	6 cut(s)	262, 1257, 1616, 1719, 2197, 2268
NmuCI	GTSAC	6 cut(s)	733, 747, 776, 994, 1355, 2470
NruI	TCGCGA	1 cut(s)	1364
NsbI	TGCGCA	1 cut(s)	95
OliI	CACNNNNGTG	1 cut(s)	774
PaeR7I	CTCGAG	1 cut(s)	1028
PaqCI	CACCTGC	1 cut(s)	649
PcsI	WCGNNNNNNNCGW	2 cut(s)	336, 345
PdmI	GAANNNNTTC	1 cut(s)	2619
PfeI	GAWTC	6 cut(s)	209, 964, 1496, 1795, 2338, 2498
Pfl23II	CGTACG	1 cut(s)	275
PflMI	CCANNNNNTGG	1 cut(s)	2276
PleI	GAGTC	5 cut(s)	95, 119, 288, 676, 1323
PpsI	GAGTC	5 cut(s)	95, 119, 288, 676, 1323
PpuMI	RGGWCCY	1 cut(s)	1264
PshAI	GACNNNNGTC	2 cut(s)	2133, 2366
Psp124BI	GAGCTC	1 cut(s)	330
Psp5II	RGGWCCY	1 cut(s)	1264
Psp6I	CCWGG	4 cut(s)	1266, 1524, 2070, 2199
PspEI	GGTNACC	2 cut(s)	733, 776
PspGI	CCWGG	4 cut(s)	1266, 1524, 2070, 2199
PspLI	CGTACG	1 cut(s)	275
PspN4I	GGNNCC	6 cut(s)	262, 1257, 1616, 1719, 2197, 2268
PspPI	GGNCC	6 cut(s)	79, 418, 1255, 1264, 1438, 1718
PspPPI	RGGWCCY	1 cut(s)	1264
PspXI	VCTCGAGB	1 cut(s)	1028
PsuI	RGATCY	2 cut(s)	920, 2076
PvuII	CAGCTG	2 cut(s)	1952, 2273
RruI	TCGCGA	1 cut(s)	1364
RsaI	GTAC	7 cut(s)	277, 530, 1158, 1351, 1616, 2257, 2453
RsaNI	GTAC	7 cut(s)	276, 529, 1157, 1350, 1615, 2256, 2452
RseI	CAYNNNNRTG	2 cut(s)	551, 774
SacI	GAGCTC	1 cut(s)	330
Sau3AI	GATC	7 cut(s)	920, 1513, 1555, 2076, 2485, 2489, 2505
Sau96I	GGNCC	6 cut(s)	79, 418, 1255, 1264, 1438, 1718
ScaI	AGTACT	1 cut(s)	2453
SchI	GAGTC	5 cut(s)	95, 119, 288, 676, 1323
ScrFI	CCNGG	4 cut(s)	1268, 1526, 2072, 2201
SduI	GDGCHC	4 cut(s)	41, 330, 1029, 2200
SfaNI	GCATC	4 cut(s)	442, 802, 2047, 2057
SfcI	CTRYAG	1 cut(s)	2052
Sfr274I	CTCGAG	1 cut(s)	1028
SinI	GGWCC	4 cut(s)	418, 1255, 1264, 1718
SlaI	CTCGAG	1 cut(s)	1028
SmiMI	CAYNNNNRTG	2 cut(s)	551, 774
SmlI	CTYRAG	3 cut(s)	1028, 1936, 2131
SmoI	CTYRAG	3 cut(s)	1028, 1936, 2131
SpeI	ACTAGT	1 cut(s)	1145
SspI	AATATT	2 cut(s)	1771, 2172
SspMI	CTAG	5 cut(s)	723, 1146, 1575, 2372, 2598
SstI	GAGCTC	1 cut(s)	330
StyD4I	CCNGG	4 cut(s)	1266, 1524, 2070, 2199
StyI	CCWWGG	5 cut(s)	75, 722, 1260, 2287, 2510
TaaI	ACNGT	9 cut(s)	25, 202, 280, 445, 730, 1161, 1430, 1564, 2631
TaiI	ACGT	2 cut(s)	273, 2436
TaqII	GACCGA	1 cut(s)	362
TatI	WGTACW	2 cut(s)	1156, 2451
TauI	GCSGC	1 cut(s)	434
TfiI	GAWTC	6 cut(s)	209, 964, 1496, 1795, 2338, 2498
TscAI	CASTG	5 cut(s)	565, 735, 756, 1551, 2050
TseFI	GTSAC	6 cut(s)	733, 747, 776, 994, 1355, 2470
TseI	GCWGC	9 cut(s)	10, 461, 533, 574, 1891, 2025, 2216, 2320, 2405
Tsp45I	GTSAC	6 cut(s)	733, 747, 776, 994, 1355, 2470
TspDTI	ATGAA	3 cut(s)	755, 1233, 1604
TspGWI	ACGGA	4 cut(s)	49, 263, 704, 2435
TspRI	CASTG	5 cut(s)	565, 735, 756, 1551, 2050
Van91I	CCANNNNNTGG	1 cut(s)	2276
Vha464I	CTTAAG	2 cut(s)	1936, 2131
VpaK11BI	GGWCC	4 cut(s)	418, 1255, 1264, 1718
XapI	RAATTY	6 cut(s)	374, 636, 697, 1271, 1670, 1850
XbaI	TCTAGA	1 cut(s)	2597
XhoI	CTCGAG	1 cut(s)	1028
XmaJI	CCTAGG	1 cut(s)	722
XmiI	GTMKAC	1 cut(s)	440
XmnI	GAANNNNTTC	1 cut(s)	2619
XspI	CTAG	5 cut(s)	723, 1146, 1575, 2372, 2598
ZrmI	AGTACT	1 cut(s)	2453

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.