Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0008801

Physical Location & Seq

Genomic Coordinates Reverse (-)

889086 .. 896861

Gene Structure 7776 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG007000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2358 bp

ATGGCGGGCCTTGCAGTGATAAGAGTCGGAGGCAAAGGCTCATCTCTCTCCTCCTCCGCCGTCTACGCCGTCGCCAATGCCCTCGCTCACGTCACTATCGACTCTTCCGCCCTCGACAGACTCTCCTCCTCCGCCGTCGCCAATCTCAAGCCTTACCACCTCGTCTCTCTCCTCCCTTCCTTCCCGTCCGTCCAAGAATCCAGAGCCTCCCTCGTTGTCCTCCTCGCCAAGCTCCTCTCCCTCAACATCCGTACCGTTCTCCCGGTTCGAATCGCCGCCGCCCTAAATTCCGGCTCCACTCAAGACCTGGGGCTCGAAACCCTCGATTTGACCGAAGAAGAGGCTCTTGCATTGGAGAAGCTCAAAGATTCGTCTGCTTTGTACGGCGTCTGTGCGCTTCTGGACCACCAATCGGCGGCTCTGTCCACGGTTTCGGACGCCGTGGCGGCGCTTTCTTGCGAGGCGTTGAAGGCTGACGTGGCGGGGTTCAATTCGGTTGATGCCGGGGACGGGTACGCGGCGAAGGAGGTGATCGGAGTTGCTAGTGATTTGAAGGTTTTGTTGAACGGGTCGAAGTTAGTCGGCAAAGTTGAGACTGAAGCTGTATCGGAGATTCCGAAAATTCACGCCAGTCTGAGAGTGCAAGTGAAATTGGTGCATGCTAAGACTAGGGAGGAGCTGAATTCTGGAGCTAAAGTAGGGAAAGGTGGTTCCCGGAGCGCCAGGTCGGAGAGGACGGCATTGTTGGCGTTGGCGGCGGCGCTGTTTGACTTGGGGGATTACAGTCTCCGGCGAGCGAAGTTGGATTTGGAGGCAGTGGGGAGTGAGAGTTTGTGTTTGAGATTGGTGGAGTTGTTTGGGAAGCAATGCCCTAGTGGTGAAAGCTTGAGAAGTGGGCTTAAGCTGGTTCAGGAGTTGGCTTTCAAAGAGGAAGAGAATTATGTTAAGTTTGCGCATGCAGTGAATGTGTTGATGGAGCTTGTTTGGAAGATTGTGACGTGGGAGGCAATAGCAGTGTTTGTGGCGTTGGAGGGAGCAGAGTTGACTGGGAAGGGTCAAGGAGGTGAAGTGAATGGAGAAGTGAATGCGAAAACAGGGAAGAAGAGTGAGAAGAAGAAGAAGGCGGTTTTGGGGAAAGGGACAACTGTTATGGTACAGTTGATTAAAGATAAGCTGCAGGGTGAGGGAGGAAATGCTGTTGATAGTTCAGAGTTGTTGGAAAATTGGGTCAAGGAGCTTTTATTGTTTTTGGACCCGAAGAGCTCTGAGTTTGATGGTTTGTTGAACAAGGTGAAGGAGATAGTAGAAAGCAATGAAACTAGAAGACTCCCAAAGCTTCCAAAGGGTACTCGTGACTTTGCAAAAGAACAAATGACAATAAGAAAGAAAGCATTTTCGATAATAGAAGATGTTTTTGAGAGGCATGGTGCCACAGCTCTGGATACTCCAGTTTTTGAATTGAGAGACACTCTCATGGGCAAATATGGGGAAGACTCGAAATTGATTTATGATCTTGCTGACCAGGGAGGAGAGCTTTCCTCACTGCGATATGATTTAACTGTTCCATTTGCTAGGTATGTTGCTATGAATGGTATCACATCCTTTAAAAGGTACCAAATAGCAAAGGTCTACAGAAGAGACAATCCCTCTAAGGGTAGATACCGTGAGTTCTACCAATGCGACTTTGATATTGCTGGCCAAAGTGAAAAAATGGGACCAGATTTTGAGGCTGTCTATGTGCTAACAGAACTTCTTGATGAGCTGAATATTGGAGACTACGAGGTTAAGTTAAATCACCGAAAGTTGTTGGATGGAATGTTGGAAATATGTGGAGTGCCTCCTGAAAAATTCAGAACTATTTGTTCTAGTATTGACAAGTTAGACAAGCAGTCATTCGAGCAAATAAAAAAAGAAATGGTGGAGGAGAAGGGCTTAAGTGTTGAGACAGCCGACAGAATTGGTACTTTTGTGAAAGAGCGGGGACATCCTTTGGAATTGTTATCTAAGCTTAAACAGGAGGGCAGCGAGTTCTTGGAGAACAATTCATCTATAGATGCACTGAATGACCTGGAGATTTTGTTCAAATGTTTGGAAAAGTCACAGTGTATTGGAAAAGTGGTTTTTGACTTGAGTCTTGCAAGGGGTCTTGATTATTATACTGGAGTCATATATGAAGCCGTTTTCAAGGGTGGTGCGCAGGTAAAATTATGTATATGTCATTTGGAATTTCTTTGCATTCATTACCTGTATAATCTGTGTCATCTGACTCAAGTGGCTTGTGACATTTCATTAATCAATGTGATGTTGCCTTGTTTGCCAAGAAAAAACTGTGATGTTGCCTTCCAAAAGAATATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0019538 GO:0032543 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:0140053 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

HGTP_anticodon Lyase_aromatic tRNA-synt_His

Protein Analysis

785

Amino Acids

85.86

Weight (kDa)

5.92

Isoelectric Point (pI)

33.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lyase_aromatic	PF00221	101 - 229	1.3e-06	Aromatic amino acid lyase
tRNA-synt_His	PF13393	449 - 730	1.2e-28	Histidyl-tRNA synthetase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008801)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02760 AT3G02760
fragaria_vesca	FvH4_2g00780 FvH4_2g00780 FvH4_2g00780 FvH4_2g00780 FvH4_3g14280 FvH4_3g25240
malus_domestica	MD05G1003500.v1.1 MD10G1004600.v1.1
prunus_persica	Prupe.8G006900_v2.0.a1
pyrus_communis	pycom05g00320 pycom10g00360
rosa_chinensis	RchiOBHm_Chr6g0251201
rosa_laevigata	RLG00000015474
rosa_multiflora	Rmu_sc0004077.1_g000009
rosa_roxburghii	Rroxscaffold_7G00216930
rosa_rugosa	Rorug05G0500700.1
rosa_samantha	Rh6AG010100 Rh6BG001900 Rh6CG007000 Rh6DG007500
rosa_wichuraiana	Rw6G000990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	954, 2196
Acc36I	ACCTGC	1 cut(s)	2188
Acc65I	GGTACC	1 cut(s)	1611
AccB1I	GGYRCC	2 cut(s)	1427, 1611
AccBSI	CCGCTC	1 cut(s)	1978
AccI	GTMKAC	2 cut(s)	63, 1629
AccII	CGCG	1 cut(s)	518
AcoI	YGGCCR	1 cut(s)	1696
AcsI	RAATTY	5 cut(s)	286, 621, 682, 1847, 2225
AcuI	CTGAAG	1 cut(s)	618
AcyI	GRCGYC	2 cut(s)	387, 438
AfaI	GTAC	7 cut(s)	253, 383, 515, 1155, 1348, 1613, 1963
AfiI	CCNNNNNNNGG	5 cut(s)	412, 415, 510, 1608, 1652
AflII	CTTAAG	2 cut(s)	899, 1933
AgsI	TTSAA	9 cut(s)	469, 490, 553, 565, 925, 1285, 1457, 2083, 2185
AhdI	GACNNNNNGTC	1 cut(s)	1888
AjiI	CACGTC	3 cut(s)	91, 478, 999
AjnI	CCWGG	4 cut(s)	306, 722, 1521, 2067
AjuI	GAANNNNNNNTTGG	4 cut(s)	791, 823, 1112, 1144
AloI	GAACNNNNNNTCC	4 cut(s)	694, 726, 2063, 2095
Alw21I	GWGCWC	1 cut(s)	1265
Alw26I	GTCTC	7 cut(s)	169, 587, 791, 1458, 1632, 1767, 1937
AoxI	GGCC	2 cut(s)	7, 1696
ApeKI	GCWGC	2 cut(s)	1174, 2022
ApoI	RAATTY	5 cut(s)	286, 621, 682, 1847, 2225
AseI	ATTAAT	1 cut(s)	2291
Asp718I	GGTACC	1 cut(s)	1611
AspLEI	GCGC	6 cut(s)	397, 451, 722, 763, 955, 2197
AspS9I	GGNCC	4 cut(s)	7, 403, 1252, 1715
AsuC2I	CCSGG	3 cut(s)	263, 505, 715
AsuHPI	GGTGA	6 cut(s)	541, 890, 1076, 1193, 1303, 1787
AsuII	TTCGAA	1 cut(s)	268
AvaII	GGWCC	3 cut(s)	403, 1252, 1715
BaeI	ACNNNNGTAYC	6 cut(s)	235, 268, 1434, 1467, 1953, 1986
BalI	TGGCCA	1 cut(s)	1698
BanI	GGYRCC	2 cut(s)	1427, 1611
BanII	GRGCYC	2 cut(s)	315, 1265
BauI	CACGAG	1 cut(s)	1350
BbsI	GAAGAC	2 cut(s)	1330, 1497
Bbv12I	GWGCWC	1 cut(s)	1265
BbvI	GCAGC	2 cut(s)	1161, 2034
BccI	CCATC	3 cut(s)	967, 1268, 1805
BceAI	ACGGC	7 cut(s)	44, 53, 119, 400, 425, 753, 2162
BciT130I	CCWGG	4 cut(s)	308, 724, 1523, 2069
BciVI	GTATCC	1 cut(s)	1435
BcnI	CCSGG	3 cut(s)	263, 505, 715
BcoDI	GTCTC	7 cut(s)	169, 587, 791, 1458, 1632, 1767, 1937
BfaI	CTAG	6 cut(s)	543, 669, 873, 1320, 1572, 1866
BfmI	CTRYAG	3 cut(s)	1175, 1630, 2049
BfoI	RGCGCY	3 cut(s)	452, 723, 764
BfrI	CTTAAG	2 cut(s)	899, 1933
BfuAI	ACCTGC	1 cut(s)	2188
BfuI	GTATCC	1 cut(s)	1435
BglI	GCCNNNNNGGC	1 cut(s)	446
BisI	GCNGC	9 cut(s)	276, 279, 417, 447, 519, 756, 759, 1175, 2023
BlsI	GCNGC	9 cut(s)	277, 280, 418, 448, 520, 757, 760, 1176, 2024
Bme1390I	CCNGG	7 cut(s)	263, 308, 505, 715, 724, 1523, 2069
Bme18I	GGWCC	3 cut(s)	403, 1252, 1715
BmeRI	GACNNNNNGTC	1 cut(s)	1888
BmgBI	CACGTC	3 cut(s)	91, 478, 999
BmgT120I	GGNCC	4 cut(s)	7, 403, 1252, 1715
BmiI	GGNNCC	6 cut(s)	295, 712, 1254, 1429, 1613, 1716
BmrFI	CCNGG	7 cut(s)	263, 308, 505, 715, 724, 1523, 2069
BmrI	ACTGGG	1 cut(s)	1056
BmsI	GCATC	2 cut(s)	490, 2044
BmuI	ACTGGG	1 cut(s)	1056
BoxI	GACNNNNGTC	1 cut(s)	2130
BpiI	GAAGAC	2 cut(s)	1330, 1497
BplI	GAGNNNNNCTC	8 cut(s)	195, 227, 1453, 1485, 1455, 1487, 1523, 1555
BpmI	CTGGAG	4 cut(s)	708, 1431, 2090, 2181
Bpu14I	TTCGAA	1 cut(s)	268
BpuEI	CTTGAG	5 cut(s)	131, 285, 907, 2149, 2253
BpuMI	CCSGG	3 cut(s)	263, 505, 715
BsaHI	GRCGYC	2 cut(s)	387, 438
BsaJI	CCNNGG	5 cut(s)	307, 426, 441, 504, 1522
Bsc4I	CCNNNNNNNGG	5 cut(s)	412, 415, 510, 1608, 1652
Bse1I	ACTGG	4 cut(s)	630, 1051, 1448, 2164
Bse3DI	GCAATG	2 cut(s)	872, 1318
BseBI	CCWGG	4 cut(s)	308, 724, 1523, 2069
BseDI	CCNNGG	5 cut(s)	307, 426, 441, 504, 1522
BseGI	GGATG	4 cut(s)	246, 1598, 1816, 1984
BseLI	CCNNNNNNNGG	5 cut(s)	412, 415, 510, 1608, 1652
BseMI	GCAATG	2 cut(s)	872, 1318
BseMII	CTCAG	2 cut(s)	626, 1257
BseNI	ACTGG	4 cut(s)	630, 1051, 1448, 2164
BseXI	GCAGC	2 cut(s)	1161, 2034
Bsh1236I	CGCG	1 cut(s)	518
BshFI	GGCC	2 cut(s)	9, 1698
BshNI	GGYRCC	2 cut(s)	1427, 1611
BsiHKAI	GWGCWC	1 cut(s)	1265
BsiSI	CCGG	5 cut(s)	263, 291, 504, 715, 790
BslFI	GGGAC	4 cut(s)	521, 1153, 1728, 1995
BslI	CCNNNNNNNGG	5 cut(s)	412, 415, 510, 1608, 1652
BsmAI	GTCTC	7 cut(s)	169, 587, 791, 1458, 1632, 1767, 1937
BsmBI	CGTCTC	1 cut(s)	169
BsmFI	GGGAC	4 cut(s)	521, 1153, 1728, 1995
BsmI	GAATGC	2 cut(s)	1090, 2235
BsnI	GGCC	2 cut(s)	9, 1698
Bsp119I	TTCGAA	1 cut(s)	268
Bsp1286I	GDGCHC	2 cut(s)	315, 1265
Bsp143I	GATC	2 cut(s)	531, 1510
BspANI	GGCC	2 cut(s)	9, 1698
BspCNI	CTCAG	2 cut(s)	627, 1258
BspFNI	CGCG	1 cut(s)	518
BspLI	GGNNCC	6 cut(s)	295, 712, 1254, 1429, 1613, 1716
BspMAI	CTGCAG	1 cut(s)	1179
BspMI	ACCTGC	1 cut(s)	2188
BspQI	GCTCTTC	1 cut(s)	1253
BspT104I	TTCGAA	1 cut(s)	268
BspT107I	GGYRCC	2 cut(s)	1427, 1611
BspTI	CTTAAG	2 cut(s)	899, 1933
BsrBI	CCGCTC	1 cut(s)	1978
BsrDI	GCAATG	2 cut(s)	872, 1318
BsrI	ACTGG	4 cut(s)	630, 1051, 1448, 2164
BssECI	CCNNGG	5 cut(s)	307, 426, 441, 504, 1522
BssMI	GATC	2 cut(s)	531, 1510
BssNI	GRCGYC	2 cut(s)	387, 438
BssSI	CACGAG	1 cut(s)	1350
Bst2BI	CACGAG	1 cut(s)	1350
Bst2UI	CCWGG	4 cut(s)	308, 724, 1523, 2069
Bst4CI	ACNGT	9 cut(s)	256, 430, 785, 1147, 1158, 1561, 1664, 2103, 2330
Bst6I	CTCTTC	6 cut(s)	109, 333, 927, 1097, 1253, 1630
BstACI	GRCGYC	2 cut(s)	387, 438
BstAFI	CTTAAG	2 cut(s)	899, 1933
BstBI	TTCGAA	1 cut(s)	268
BstC8I	GCNNGC	5 cut(s)	7, 660, 795, 957, 1696
BstDEI	CTNAG	5 cut(s)	635, 663, 1266, 1650, 2004
BstDSI	CCRYGG	2 cut(s)	426, 441
BstENI	CCTNNNNNAGG	1 cut(s)	1606
BstF5I	GGATG	4 cut(s)	246, 1598, 1816, 1984
BstFNI	CGCG	1 cut(s)	518
BstH2I	RGCGCY	3 cut(s)	452, 723, 764
BstHHI	GCGC	6 cut(s)	397, 451, 722, 763, 955, 2197
BstKTI	GATC	2 cut(s)	534, 1513
BstMAI	GTCTC	7 cut(s)	169, 587, 791, 1458, 1632, 1767, 1937
BstMBI	GATC	2 cut(s)	531, 1510
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 65, 446, 470, 479, 746, 755, 2314
BstNI	CCWGG	4 cut(s)	308, 724, 1523, 2069
BstNSI	RCATGY	2 cut(s)	662, 959
BstPAI	GACNNNNGTC	1 cut(s)	2130
BstSCI	CCNGG	7 cut(s)	261, 306, 503, 713, 722, 1521, 2067
BstSFI	CTRYAG	3 cut(s)	1175, 1630, 2049
BstUI	CGCG	1 cut(s)	518
BstV1I	GCAGC	2 cut(s)	1161, 2034
BstV2I	GAAGAC	2 cut(s)	1330, 1497
BstXI	CCANNNNNNTGG	1 cut(s)	1438
BsuI	GTATCC	1 cut(s)	1435
BsuRI	GGCC	2 cut(s)	9, 1698
BtgI	CCRYGG	2 cut(s)	426, 441
BtrI	CACGTC	3 cut(s)	91, 478, 999
BtsCI	GGATG	4 cut(s)	246, 1598, 1816, 1984
BtsI	GCAGTG	5 cut(s)	21, 822, 966, 1020, 1541
BtsIMutI	CAGTG	7 cut(s)	21, 822, 966, 1020, 1541, 2057, 2108
BveI	ACCTGC	1 cut(s)	2188
Cac8I	GCNNGC	5 cut(s)	7, 660, 795, 957, 1696
CfoI	GCGC	6 cut(s)	397, 451, 722, 763, 955, 2197
Cfr13I	GGNCC	4 cut(s)	7, 403, 1252, 1715
CseI	GACGC	2 cut(s)	376, 446
Csp6I	GTAC	7 cut(s)	252, 382, 514, 1154, 1347, 1612, 1962
CviAII	CATG	4 cut(s)	659, 956, 1424, 1474
CviQI	GTAC	7 cut(s)	252, 382, 514, 1154, 1347, 1612, 1962
DdeI	CTNAG	5 cut(s)	635, 663, 1266, 1650, 2004
DpnI	GATC	2 cut(s)	533, 1512
DpnII	GATC	2 cut(s)	531, 1510
DraI	TTTAAA	1 cut(s)	1606
DriI	GACNNNNNGTC	1 cut(s)	1888
EaeI	YGGCCR	1 cut(s)	1696
Eam1104I	CTCTTC	6 cut(s)	109, 333, 927, 1097, 1253, 1630
Eam1105I	GACNNNNNGTC	1 cut(s)	1888
EarI	CTCTTC	6 cut(s)	109, 333, 927, 1097, 1253, 1630
EciI	GGCGGA	3 cut(s)	46, 97, 121
Ecl136II	GAGCTC	1 cut(s)	1263
Eco24I	GRGCYC	2 cut(s)	315, 1265
Eco47I	GGWCC	3 cut(s)	403, 1252, 1715
Eco53kI	GAGCTC	1 cut(s)	1263
Eco57I	CTGAAG	1 cut(s)	618
EcoICRI	GAGCTC	1 cut(s)	1263
EcoNI	CCTNNNNNAGG	1 cut(s)	1606
EcoRI	GAATTC	1 cut(s)	682
EcoRII	CCWGG	4 cut(s)	306, 722, 1521, 2067
EcoT38I	GRGCYC	2 cut(s)	315, 1265
Esp3I	CGTCTC	1 cut(s)	169
FaeI	CATG	4 cut(s)	662, 959, 1427, 1477
FalI	AAGNNNNNCTT	2 cut(s)	330, 362
FaqI	GGGAC	4 cut(s)	521, 1153, 1728, 1995
FatI	CATG	4 cut(s)	658, 955, 1423, 1473
FauI	CCCGC	2 cut(s)	475, 1971
FblI	GTMKAC	2 cut(s)	63, 1629
Fnu4HI	GCNGC	9 cut(s)	276, 279, 417, 447, 519, 756, 759, 1175, 2023
FokI	GGATG	4 cut(s)	233, 1585, 1823, 1971
FriOI	GRGCYC	2 cut(s)	315, 1265
Fsp4HI	GCNGC	9 cut(s)	276, 279, 417, 447, 519, 756, 759, 1175, 2023
FspBI	CTAG	6 cut(s)	543, 669, 873, 1320, 1572, 1866
FspI	TGCGCA	2 cut(s)	954, 2196
GlaI	GCGC	6 cut(s)	396, 450, 721, 762, 954, 2196
GluI	GCNGC	9 cut(s)	276, 279, 417, 447, 519, 756, 759, 1175, 2023
GsuI	CTGGAG	4 cut(s)	708, 1431, 2090, 2181
HaeII	RGCGCY	3 cut(s)	452, 723, 764
HaeIII	GGCC	2 cut(s)	9, 1698
HapII	CCGG	5 cut(s)	263, 291, 504, 715, 790
HgaI	GACGC	2 cut(s)	376, 446
HhaI	GCGC	6 cut(s)	397, 451, 722, 763, 955, 2197
Hin1I	GRCGYC	2 cut(s)	387, 438
Hin1II	CATG	4 cut(s)	662, 959, 1427, 1477
Hin6I	GCGC	6 cut(s)	395, 449, 720, 761, 953, 2195
HinP1I	GCGC	6 cut(s)	395, 449, 720, 761, 953, 2195
HincII	GTYRAC	1 cut(s)	1044
HindII	GTYRAC	1 cut(s)	1044
HindIII	AAGCTT	3 cut(s)	883, 1334, 2006
HpaII	CCGG	5 cut(s)	263, 291, 504, 715, 790
HphI	GGTGA	6 cut(s)	541, 890, 1076, 1193, 1303, 1787
Hpy166II	GTNNAC	4 cut(s)	64, 426, 1044, 1630
Hpy8I	GTNNAC	4 cut(s)	64, 426, 1044, 1630
Hpy99I	CGWCG	2 cut(s)	74, 140
HpyCH4III	ACNGT	9 cut(s)	256, 430, 785, 1147, 1158, 1561, 1664, 2103, 2330
HpyCH4IV	ACGT	3 cut(s)	90, 477, 998
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 65, 446, 470, 479, 746, 755, 2314
HpyF3I	CTNAG	5 cut(s)	635, 663, 1266, 1650, 2004
HpySE526I	ACGT	3 cut(s)	90, 477, 998
Hsp92I	GRCGYC	2 cut(s)	387, 438
Hsp92II	CATG	4 cut(s)	662, 959, 1427, 1477
HspAI	GCGC	6 cut(s)	395, 449, 720, 761, 953, 2195
KpnI	GGTACC	1 cut(s)	1615
Kzo9I	GATC	2 cut(s)	531, 1510
LguI	GCTCTTC	1 cut(s)	1253
LmnI	GCTCC	8 cut(s)	237, 299, 676, 689, 717, 976, 1034, 1234
Lsp1109I	GCAGC	2 cut(s)	1161, 2034
LweI	GCATC	2 cut(s)	490, 2044
MaeI	CTAG	6 cut(s)	543, 669, 873, 1320, 1572, 1866
MaeII	ACGT	3 cut(s)	90, 477, 998
MaeIII	GTNAC	5 cut(s)	91, 994, 1352, 2097, 2279
MalI	GATC	2 cut(s)	533, 1512
MbiI	CCGCTC	1 cut(s)	1978
MboI	GATC	2 cut(s)	531, 1510
MhlI	GDGCHC	2 cut(s)	315, 1265
MlsI	TGGCCA	1 cut(s)	1698
MluNI	TGGCCA	1 cut(s)	1698
MlyI	GAGTC	8 cut(s)	33, 95, 114, 1320, 1487, 2140, 2172, 2260
MmeI	TCCRAC	7 cut(s)	7, 708, 783, 1008, 1197, 1788, 1800
Mox20I	TGGCCA	1 cut(s)	1698
MscI	TGGCCA	1 cut(s)	1698
MslI	CAYNNNNRTG	1 cut(s)	1472
Msp20I	TGGCCA	1 cut(s)	1698
MspCI	CTTAAG	2 cut(s)	899, 1933
MspI	CCGG	5 cut(s)	263, 291, 504, 715, 790
MspR9I	CCNGG	7 cut(s)	263, 308, 505, 715, 724, 1523, 2069
Mva1269I	GAATGC	2 cut(s)	1090, 2235
MvaI	CCWGG	4 cut(s)	308, 724, 1523, 2069
MvnI	CGCG	1 cut(s)	518
MwoI	GCNNNNNNNGC	8 cut(s)	11, 65, 446, 470, 479, 746, 755, 2314
NciI	CCSGG	3 cut(s)	263, 505, 715
NdeII	GATC	2 cut(s)	531, 1510
NlaIII	CATG	4 cut(s)	662, 959, 1427, 1477
NlaIV	GGNNCC	6 cut(s)	295, 712, 1254, 1429, 1613, 1716
NmuCI	GTSAC	5 cut(s)	91, 994, 1352, 2097, 2279
NsbI	TGCGCA	2 cut(s)	954, 2196
NspI	RCATGY	2 cut(s)	662, 959
NspV	TTCGAA	1 cut(s)	268
PaeI	GCATGC	2 cut(s)	662, 959
PciSI	GCTCTTC	1 cut(s)	1253
PcsI	WCGNNNNNNNCGW	4 cut(s)	96, 321, 330, 614
PctI	GAATGC	2 cut(s)	1090, 2235
PfeI	GAWTC	4 cut(s)	197, 270, 368, 613
PfoI	TCCNGGA	1 cut(s)	713
PkrI	GCNGC	9 cut(s)	277, 280, 418, 448, 520, 757, 760, 1176, 2024
PleI	GAGTC	8 cut(s)	32, 95, 114, 1320, 1487, 2139, 2171, 2260
PpsI	GAGTC	8 cut(s)	32, 95, 114, 1320, 1487, 2139, 2171, 2260
PshAI	GACNNNNGTC	1 cut(s)	2130
PshBI	ATTAAT	1 cut(s)	2291
Psp124BI	GAGCTC	1 cut(s)	1265
Psp6I	CCWGG	4 cut(s)	306, 722, 1521, 2067
PspGI	CCWGG	4 cut(s)	306, 722, 1521, 2067
PspN4I	GGNNCC	6 cut(s)	295, 712, 1254, 1429, 1613, 1716
PspPI	GGNCC	4 cut(s)	7, 403, 1252, 1715
PstI	CTGCAG	1 cut(s)	1179
RsaI	GTAC	7 cut(s)	253, 383, 515, 1155, 1348, 1613, 1963
RsaNI	GTAC	7 cut(s)	252, 382, 514, 1154, 1347, 1612, 1962
RseI	CAYNNNNRTG	1 cut(s)	1472
SacI	GAGCTC	1 cut(s)	1265
SapI	GCTCTTC	1 cut(s)	1253
SatI	GCNGC	9 cut(s)	276, 279, 417, 447, 519, 756, 759, 1175, 2023
Sau3AI	GATC	2 cut(s)	531, 1510
Sau96I	GGNCC	4 cut(s)	7, 403, 1252, 1715
SchI	GAGTC	8 cut(s)	33, 95, 114, 1320, 1487, 2140, 2172, 2260
ScrFI	CCNGG	7 cut(s)	263, 308, 505, 715, 724, 1523, 2069
SduI	GDGCHC	2 cut(s)	315, 1265
SfaNI	GCATC	2 cut(s)	490, 2044
SfcI	CTRYAG	3 cut(s)	1175, 1630, 2049
SfuI	TTCGAA	1 cut(s)	268
SinI	GGWCC	3 cut(s)	403, 1252, 1715
SmiMI	CAYNNNNRTG	1 cut(s)	1472
SmlI	CTYRAG	7 cut(s)	146, 300, 886, 899, 1933, 2128, 2268
SmoI	CTYRAG	7 cut(s)	146, 300, 886, 899, 1933, 2128, 2268
SphI	GCATGC	2 cut(s)	662, 959
SspI	AATATT	2 cut(s)	1768, 2353
SspMI	CTAG	6 cut(s)	543, 669, 873, 1320, 1572, 1866
SstI	GAGCTC	1 cut(s)	1265
StyD4I	CCNGG	7 cut(s)	261, 306, 503, 713, 722, 1521, 2067
TaaI	ACNGT	9 cut(s)	256, 430, 785, 1147, 1158, 1561, 1664, 2103, 2330
TaiI	ACGT	3 cut(s)	93, 480, 1001
TaqI	TCGA	9 cut(s)	99, 114, 268, 315, 324, 572, 1397, 1496, 1896
TaqII	GACCGA	1 cut(s)	347
TauI	GCSGC	7 cut(s)	278, 281, 419, 449, 521, 758, 761
TfiI	GAWTC	4 cut(s)	197, 270, 368, 613
TscAI	CASTG	7 cut(s)	21, 822, 966, 1020, 1548, 2064, 2108
TseFI	GTSAC	5 cut(s)	91, 994, 1352, 2097, 2279
TseI	GCWGC	2 cut(s)	1174, 2022
Tsp45I	GTSAC	5 cut(s)	91, 994, 1352, 2097, 2279
TspDTI	ATGAA	6 cut(s)	1329, 1601, 2034, 2187, 2228, 2277
TspGWI	ACGGA	2 cut(s)	178, 239
TspRI	CASTG	7 cut(s)	21, 822, 966, 1020, 1548, 2064, 2108
Vha464I	CTTAAG	2 cut(s)	899, 1933
VpaK11BI	GGWCC	3 cut(s)	403, 1252, 1715
VspI	ATTAAT	1 cut(s)	2291
XagI	CCTNNNNNAGG	1 cut(s)	1606
XapI	RAATTY	5 cut(s)	286, 621, 682, 1847, 2225
XceI	RCATGY	2 cut(s)	662, 959
XcmI	CCANNNNNNNNNTGG	1 cut(s)	304
XmiI	GTMKAC	2 cut(s)	63, 1629
XspI	CTAG	6 cut(s)	543, 669, 873, 1320, 1572, 1866

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.