Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0008801

Physical Location & Seq

Genomic Coordinates Forward (+)

66586528 .. 66592532

Gene Structure 6005 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000015474

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2370 bp

ATGGCGGGCCTTGCAGTGATAAGAGTCGGAGGCAAAGGCTCATCTCTCTCCTCCTCCGCCGTCTACGCCGTCGCCAATGCCCTCGCTCACGTCACTATCGACTCTTCCGCCCTCGACAGACTCTCCTCCTCCTCCTCCGCCAATCTCAAGCCTTACCAGCTCATCTCTCTCCTCCCTTCCTTCCCGTCCGTCCAAGAATCCAGAGCCTCCCTCGTTGTCCTCCTCGCCAAGCTCCTCTCCCTCAACATCCGTACCGTTCTCCCGGTTCGAATCGCCGCCGCCCTAAATTCGGGCTCCACTCAAGACCTAGGGCTCGAAACCCTCGATTTGACCGAAGAGGAGGCTCTTGTGTTGGAGAAGCTCAAAGATTCGTCTGCTTTGTACGGCGTCTGTGCGCTTCTGGACCACCAATCGGCGGCTCTGTCCACGGTTTCGGACGCCGTCGCGGCGCTTTCTTGCGAGGCGTTGAAGGCCGACGTGGCGGGGTTTAATTCGGTTGACGCCGGGGACGGGTACGCCGCGAAGGAGGTGATCGGAGTTGCTAGTGATTTGAAGGTTTTGTTGAACGGGTCGAAGTTAGTCGGCAAAGTTGAGACTGAAGCTGTATCGGAGATTCCGAAAATTCACGCCAGTCTGAGAGTGCAAGTGAAATTGGTGCATGCGAAGACTAGGGAGGAGCTGAATTCTGGAGCCAAAGTAGGGAAAGGTGGTTCCCGGAGCGCCAGGTCGGAAAGGACGGCATTGCTGGCCTTGGCGGCGGCGCTGTTTGACTTGGGGGACTATAGTCTCCGAAGAGCGAAGTTGGATTTGGAGGCAGTGGGGAGTGAGAGTTTGCGTTTGAGATTGGTGGAGTTGTTTGGGAAGCAATGCCCTACTGGTGAAAGCTTGAGAGGTGGGCTTAAGTTGGTTCAGGAGTTGGCTTTCGAAGAGGAAGAGAATTATGTTAAGTTTGCGCATGCAGTGAATGTGTTGATGGAGCTTGTATGGAAGATTGTGACTTGGGAGGCAATAACAGTGTTTGTGGCGCTGGAGGGAGCAGAGTTGACTGGGAAGGGTCAAGGAGGTGAAGTGAATGGAGAAGTGAATGCAAAAACAGGGAAGAAGAGTGAGAAGAAGAAGAAGGCAGTTTTGGGGAAAGGGACAACTGTTATGGTACAGTTGATTAAAGATAAGCTGCAGGGTGAGGGAGGAAATGCTGTTGATAGTTCAGAGTTGTTGGAAAATTGGGTCAAGGAGCTTTTATTGTTTTTGGACCCGAAGAGCTCTGAGTTTGATGGTTTGTTGAACAAGGTGAAGGAGATAGTAGAAAGCAATGAAACTAGAAGACTCCCAAAGCTTCCAAAGGGTACTCGTGACTTTGCAAAAGAACAAATGACAATAAGAAAGAAAGCATTTTCGATAATAGAAGATGTTTTTGAGAGGCATGGTGCCACAGCTCTGGATACTCCAGTTTTTGAATTGAGAGACACTCTCATGGGCAAATATGGGGAAGACTCGAAATTGATTTATGATCTGGCTGACCAGGGAGGAGAGCTTTCCTCACTGCGATATGATTTAACTGTTCCATTTGCTAGTGAAAAAATGGGACCAGATTTTGAGGCGGTCTATGTGCTAACAGAACTTCTTGATGAGCTGAATATTGGAGACTACGAGGTTAAGTTAAATCACCGAAAGTTGTTGGATGGAATGTTGGAAATATGTGGAGTGCCTCCTGAAAAATTCAGAACTATTTGTTCTAGTATTGACAAGTTAGACAAGCAGTCATTCGAGCAAATAAAAAAAGAAATGGTGGAGGAGAAGGGCTTAAGTGTTGAGACAGCCGACAGAATTGGTACTTTTGTGAAAGAGCGGGGACATCCTTTGGAATTGTTATCTAAGCTTAAACAGGAGGGCAGCGAGTTCTTGGAGAACAATTCATCTATAGATGCACTGAATGACCTGGAGATCTTGTTCAAATGTTTGGAAAAGTCAGAGTGTATTGGAAAAGTGGTTTTTGACTTGAGTCTTGCAAGGGGTCTTGATTATTATACAGGAGTCATATATGAAGCCGTTTTCAAGGGTGGTGCGCAGACAACCCGGGCAACCAAGACTGAGGTCCTAGTGAGTATATTAGGGGATGATATAGGACTAGCAGCAGAGCTATCAGGTGAGTTGTGGAAGGGAAAAGTGCAAGCAGAATTCTTGGCCAATAAGAGAGTGACGAAGCACTTTGATCGAGCAAAGGATTCTAAGATTCCCTGGATGATAATTGTGGGTGAAAAAGAGCAGAATGAAGGGGTTGTTCGATTGAAGAACATTGCAGCTGGGGAAGAAGTCGTAATTCAGAGAAGTGATATTGTTGAAGAACTTAAGAAGCGGTTGAATGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0019538 GO:0032543 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:0140053 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

HGTP_anticodon Lyase_aromatic tRNA-synt_His

Protein Analysis

790

Amino Acids

85.79

Weight (kDa)

5.43

Isoelectric Point (pI)

32.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_His	PF13393	530 - 688	3.3e-12	Histidyl-tRNA synthetase
HGTP_anticodon2	PF12745	695 - 787	1.2e-06	Anticodon binding domain of tRNAs
HGTP_anticodon	PF03129	709 - 786	6.7e-13	Anticodon binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008801)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02760 AT3G02760
fragaria_vesca	FvH4_2g00780 FvH4_2g00780 FvH4_2g00780 FvH4_2g00780 FvH4_3g14280 FvH4_3g25240
malus_domestica	MD05G1003500.v1.1 MD10G1004600.v1.1
prunus_persica	Prupe.8G006900_v2.0.a1
pyrus_communis	pycom05g00320 pycom10g00360
rosa_chinensis	RchiOBHm_Chr6g0251201
rosa_laevigata	RLG00000015474
rosa_multiflora	Rmu_sc0004077.1_g000009
rosa_roxburghii	Rroxscaffold_7G00216930
rosa_rugosa	Rorug05G0500700.1
rosa_samantha	Rh6AG010100 Rh6BG001900 Rh6CG007000 Rh6DG007500
rosa_wichuraiana	Rw6G000990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	954, 2067
AccB1I	GGYRCC	1 cut(s)	1427
AccBSI	CCGCTC	1 cut(s)	1849
AccI	GTMKAC	1 cut(s)	63
AccII	CGCG	2 cut(s)	446, 521
AcoI	YGGCCR	1 cut(s)	2184
AcsI	RAATTY	5 cut(s)	286, 621, 682, 1718, 2177
AcuI	CTGAAG	1 cut(s)	618
AcyI	GRCGYC	3 cut(s)	387, 438, 501
AfaI	GTAC	6 cut(s)	253, 383, 515, 1155, 1348, 1834
AfiI	CCNNNNNNNGG	5 cut(s)	289, 412, 415, 510, 699
AflII	CTTAAG	3 cut(s)	899, 1804, 2348
AhdI	GACNNNNNGTC	1 cut(s)	1759
AjiI	CACGTC	2 cut(s)	91, 478
AjnI	CCWGG	4 cut(s)	722, 1521, 1938, 2237
AjuI	GAANNNNNNNTTGG	4 cut(s)	791, 823, 1112, 1144
AloI	GAACNNNNNNTCC	4 cut(s)	694, 726, 1934, 1966
Alw21I	GWGCWC	1 cut(s)	1265
Alw26I	GTCTC	5 cut(s)	587, 791, 1458, 1638, 1808
Ama87I	CYCGRG	1 cut(s)	2076
AoxI	GGCC	4 cut(s)	7, 471, 747, 2184
ApeKI	GCWGC	4 cut(s)	1174, 1893, 2132, 2300
ApoI	RAATTY	5 cut(s)	286, 621, 682, 1718, 2177
AspA2I	CCTAGG	1 cut(s)	307
AspLEI	GCGC	7 cut(s)	397, 451, 722, 763, 955, 1027, 2068
AspS9I	GGNCC	5 cut(s)	7, 403, 1252, 1586, 2095
AsuC2I	CCSGG	5 cut(s)	263, 505, 715, 2077, 2078
AsuHPI	GGTGA	8 cut(s)	541, 890, 1076, 1193, 1303, 1658, 2159, 2267
AsuII	TTCGAA	2 cut(s)	268, 924
AvaI	CYCGRG	1 cut(s)	2076
AvaII	GGWCC	4 cut(s)	403, 1252, 1586, 2095
AvrII	CCTAGG	1 cut(s)	307
BaeI	ACNNNNGTAYC	6 cut(s)	235, 268, 1434, 1467, 1824, 1857
BalI	TGGCCA	1 cut(s)	2186
BanI	GGYRCC	1 cut(s)	1427
BanII	GRGCYC	3 cut(s)	296, 315, 1265
BauI	CACGAG	1 cut(s)	1350
BbsI	GAAGAC	3 cut(s)	671, 1330, 1497
Bbv12I	GWGCWC	1 cut(s)	1265
BbvI	GCAGC	4 cut(s)	1161, 1905, 2144, 2312
BccI	CCATC	3 cut(s)	967, 1268, 1676
BceAI	ACGGC	6 cut(s)	44, 53, 400, 425, 753, 2033
BcgI	CGANNNNNNTGC	2 cut(s)	2195, 2229
BciT130I	CCWGG	4 cut(s)	724, 1523, 1940, 2239
BciVI	GTATCC	1 cut(s)	1435
BcnI	CCSGG	5 cut(s)	263, 505, 715, 2077, 2078
BcoDI	GTCTC	5 cut(s)	587, 791, 1458, 1638, 1808
BfaI	CTAG	8 cut(s)	308, 543, 669, 1320, 1572, 1737, 2099, 2129
BfmI	CTRYAG	3 cut(s)	781, 1175, 1920
BfoI	RGCGCY	4 cut(s)	452, 723, 764, 1028
BfrI	CTTAAG	3 cut(s)	899, 1804, 2348
BfuI	GTATCC	1 cut(s)	1435
BglI	GCCNNNNNGGC	3 cut(s)	446, 479, 755
BglII	AGATCT	1 cut(s)	1944
BlnI	CCTAGG	1 cut(s)	307
Bme1390I	CCNGG	9 cut(s)	263, 505, 715, 724, 1523, 1940, 2077, 2078, 2239
Bme18I	GGWCC	4 cut(s)	403, 1252, 1586, 2095
BmeRI	GACNNNNNGTC	1 cut(s)	1759
BmeT110I	CYCGRG	1 cut(s)	2076
BmgBI	CACGTC	2 cut(s)	91, 478
BmgT120I	GGNCC	5 cut(s)	7, 403, 1252, 1586, 2095
BmiI	GGNNCC	6 cut(s)	295, 691, 712, 1254, 1429, 1587
BmrFI	CCNGG	9 cut(s)	263, 505, 715, 724, 1523, 1940, 2077, 2078, 2239
BmrI	ACTGGG	1 cut(s)	1056
BmsI	GCATC	1 cut(s)	1915
BmuI	ACTGGG	1 cut(s)	1056
BoxI	GACNNNNGTC	3 cut(s)	783, 2001, 2093
BpiI	GAAGAC	3 cut(s)	671, 1330, 1497
BplI	GAGNNNNNCTC	8 cut(s)	195, 227, 1453, 1485, 1455, 1487, 1523, 1555
BpmI	CTGGAG	4 cut(s)	708, 1049, 1431, 1961
Bpu14I	TTCGAA	2 cut(s)	268, 924
BpuEI	CTTGAG	4 cut(s)	131, 285, 907, 2020
BpuMI	CCSGG	5 cut(s)	263, 505, 715, 2077, 2078
BsaHI	GRCGYC	3 cut(s)	387, 438, 501
BsaJI	CCNNGG	7 cut(s)	307, 426, 504, 750, 1522, 2076, 2237
Bsc4I	CCNNNNNNNGG	5 cut(s)	289, 412, 415, 510, 699
Bse1I	ACTGG	4 cut(s)	630, 880, 1051, 1448
Bse3DI	GCAATG	4 cut(s)	740, 872, 1318, 2295
BseBI	CCWGG	4 cut(s)	724, 1523, 1940, 2239
BseDI	CCNNGG	7 cut(s)	307, 426, 504, 750, 1522, 2076, 2237
BseGI	GGATG	5 cut(s)	246, 1687, 1855, 2122, 2247
BseLI	CCNNNNNNNGG	5 cut(s)	289, 412, 415, 510, 699
BseMI	GCAATG	4 cut(s)	740, 872, 1318, 2295
BseMII	CTCAG	3 cut(s)	626, 1257, 2082
BseNI	ACTGG	4 cut(s)	630, 880, 1051, 1448
BseXI	GCAGC	4 cut(s)	1161, 1905, 2144, 2312
BseYI	CCCAGC	1 cut(s)	2303
Bsh1236I	CGCG	2 cut(s)	446, 521
BshFI	GGCC	4 cut(s)	9, 473, 749, 2186
BshNI	GGYRCC	1 cut(s)	1427
BsiHKAI	GWGCWC	1 cut(s)	1265
BsiHKCI	CYCGRG	1 cut(s)	2076
BsiSI	CCGG	4 cut(s)	263, 504, 715, 2077
BslFI	GGGAC	5 cut(s)	521, 791, 1153, 1599, 1866
BslI	CCNNNNNNNGG	5 cut(s)	289, 412, 415, 510, 699
BsmAI	GTCTC	5 cut(s)	587, 791, 1458, 1638, 1808
BsmFI	GGGAC	5 cut(s)	521, 791, 1153, 1599, 1866
BsmI	GAATGC	2 cut(s)	1090, 2368
BsnI	GGCC	4 cut(s)	9, 473, 749, 2186
BsoBI	CYCGRG	1 cut(s)	2076
Bsp119I	TTCGAA	2 cut(s)	268, 924
Bsp1286I	GDGCHC	3 cut(s)	296, 315, 1265
Bsp143I	GATC	4 cut(s)	531, 1510, 1944, 2212
BspANI	GGCC	4 cut(s)	9, 473, 749, 2186
BspCNI	CTCAG	3 cut(s)	627, 1258, 2083
BspFNI	CGCG	2 cut(s)	446, 521
BspLI	GGNNCC	6 cut(s)	295, 691, 712, 1254, 1429, 1587
BspMAI	CTGCAG	1 cut(s)	1179
BspQI	GCTCTTC	2 cut(s)	787, 1253
BspT104I	TTCGAA	2 cut(s)	268, 924
BspT107I	GGYRCC	1 cut(s)	1427
BspTI	CTTAAG	3 cut(s)	899, 1804, 2348
BsrBI	CCGCTC	1 cut(s)	1849
BsrDI	GCAATG	4 cut(s)	740, 872, 1318, 2295
BsrI	ACTGG	4 cut(s)	630, 880, 1051, 1448
BssECI	CCNNGG	7 cut(s)	307, 426, 504, 750, 1522, 2076, 2237
BssMI	GATC	4 cut(s)	531, 1510, 1944, 2212
BssNI	GRCGYC	3 cut(s)	387, 438, 501
BssSI	CACGAG	1 cut(s)	1350
BssT1I	CCWWGG	2 cut(s)	307, 750
Bst2BI	CACGAG	1 cut(s)	1350
Bst2UI	CCWGG	4 cut(s)	724, 1523, 1940, 2239
Bst4CI	ACNGT	6 cut(s)	256, 430, 1015, 1147, 1158, 1561
Bst6I	CTCTTC	7 cut(s)	109, 330, 787, 921, 927, 1097, 1253
BstACI	GRCGYC	3 cut(s)	387, 438, 501
BstAFI	CTTAAG	3 cut(s)	899, 1804, 2348
BstBI	TTCGAA	2 cut(s)	268, 924
BstC8I	GCNNGC	5 cut(s)	7, 660, 747, 957, 2172
BstDEI	CTNAG	5 cut(s)	635, 1266, 1875, 2091, 2229
BstDSI	CCRYGG	1 cut(s)	426
BstF5I	GGATG	5 cut(s)	246, 1687, 1855, 2122, 2247
BstFNI	CGCG	2 cut(s)	446, 521
BstH2I	RGCGCY	4 cut(s)	452, 723, 764, 1028
BstHHI	GCGC	7 cut(s)	397, 451, 722, 763, 955, 1027, 2068
BstKTI	GATC	4 cut(s)	534, 1513, 1947, 2215
BstMAI	GTCTC	5 cut(s)	587, 791, 1458, 1638, 1808
BstMBI	GATC	4 cut(s)	531, 1510, 1944, 2212
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 65, 157, 446, 470, 479, 746, 755
BstNI	CCWGG	4 cut(s)	724, 1523, 1940, 2239
BstNSI	RCATGY	2 cut(s)	662, 959
BstPAI	GACNNNNGTC	3 cut(s)	783, 2001, 2093
BstSCI	CCNGG	9 cut(s)	261, 503, 713, 722, 1521, 1938, 2075, 2076, 2237
BstSFI	CTRYAG	3 cut(s)	781, 1175, 1920
BstUI	CGCG	2 cut(s)	446, 521
BstV1I	GCAGC	4 cut(s)	1161, 1905, 2144, 2312
BstV2I	GAAGAC	3 cut(s)	671, 1330, 1497
BstX2I	RGATCY	1 cut(s)	1944
BstXI	CCANNNNNNTGG	1 cut(s)	1438
BstYI	RGATCY	1 cut(s)	1944
BsuI	GTATCC	1 cut(s)	1435
BsuRI	GGCC	4 cut(s)	9, 473, 749, 2186
BtgI	CCRYGG	1 cut(s)	426
BtrI	CACGTC	2 cut(s)	91, 478
BtsCI	GGATG	5 cut(s)	246, 1687, 1855, 2122, 2247
BtsI	GCAGTG	4 cut(s)	21, 822, 966, 1541
BtsIMutI	CAGTG	6 cut(s)	21, 822, 966, 1020, 1541, 1928
Cac8I	GCNNGC	5 cut(s)	7, 660, 747, 957, 2172
CfoI	GCGC	7 cut(s)	397, 451, 722, 763, 955, 1027, 2068
Cfr13I	GGNCC	5 cut(s)	7, 403, 1252, 1586, 2095
Cfr9I	CCCGGG	1 cut(s)	2076
CseI	GACGC	3 cut(s)	376, 446, 509
Csp6I	GTAC	6 cut(s)	252, 382, 514, 1154, 1347, 1833
CviAII	CATG	5 cut(s)	659, 956, 1424, 1474, 2367
CviQI	GTAC	6 cut(s)	252, 382, 514, 1154, 1347, 1833
DdeI	CTNAG	5 cut(s)	635, 1266, 1875, 2091, 2229
DpnI	GATC	4 cut(s)	533, 1512, 1946, 2214
DpnII	GATC	4 cut(s)	531, 1510, 1944, 2212
DriI	GACNNNNNGTC	1 cut(s)	1759
EaeI	YGGCCR	1 cut(s)	2184
Eam1104I	CTCTTC	7 cut(s)	109, 330, 787, 921, 927, 1097, 1253
Eam1105I	GACNNNNNGTC	1 cut(s)	1759
EarI	CTCTTC	7 cut(s)	109, 330, 787, 921, 927, 1097, 1253
EciI	GGCGGA	3 cut(s)	46, 97, 127
Ecl136II	GAGCTC	1 cut(s)	1263
Eco130I	CCWWGG	2 cut(s)	307, 750
Eco24I	GRGCYC	3 cut(s)	296, 315, 1265
Eco47I	GGWCC	4 cut(s)	403, 1252, 1586, 2095
Eco53kI	GAGCTC	1 cut(s)	1263
Eco57I	CTGAAG	1 cut(s)	618
Eco88I	CYCGRG	1 cut(s)	2076
EcoICRI	GAGCTC	1 cut(s)	1263
EcoO109I	RGGNCCY	1 cut(s)	2095
EcoRI	GAATTC	2 cut(s)	682, 2177
EcoRII	CCWGG	4 cut(s)	722, 1521, 1938, 2237
EcoT14I	CCWWGG	2 cut(s)	307, 750
EcoT22I	ATGCAT	1 cut(s)	2368
EcoT38I	GRGCYC	3 cut(s)	296, 315, 1265
ErhI	CCWWGG	2 cut(s)	307, 750
FaeI	CATG	5 cut(s)	662, 959, 1427, 1477, 2370
FaqI	GGGAC	5 cut(s)	521, 791, 1153, 1599, 1866
FatI	CATG	5 cut(s)	658, 955, 1423, 1473, 2366
FauI	CCCGC	2 cut(s)	475, 1842
FblI	GTMKAC	1 cut(s)	63
FokI	GGATG	5 cut(s)	233, 1694, 1842, 2129, 2254
FriOI	GRGCYC	3 cut(s)	296, 315, 1265
FspBI	CTAG	8 cut(s)	308, 543, 669, 1320, 1572, 1737, 2099, 2129
FspI	TGCGCA	2 cut(s)	954, 2067
GlaI	GCGC	7 cut(s)	396, 450, 721, 762, 954, 1026, 2067
GsaI	CCCAGC	1 cut(s)	2307
GsuI	CTGGAG	4 cut(s)	708, 1049, 1431, 1961
HaeII	RGCGCY	4 cut(s)	452, 723, 764, 1028
HaeIII	GGCC	4 cut(s)	9, 473, 749, 2186
HapII	CCGG	4 cut(s)	263, 504, 715, 2077
HgaI	GACGC	3 cut(s)	376, 446, 509
HhaI	GCGC	7 cut(s)	397, 451, 722, 763, 955, 1027, 2068
Hin1I	GRCGYC	3 cut(s)	387, 438, 501
Hin1II	CATG	5 cut(s)	662, 959, 1427, 1477, 2370
Hin6I	GCGC	7 cut(s)	395, 449, 720, 761, 953, 1025, 2066
HinP1I	GCGC	7 cut(s)	395, 449, 720, 761, 953, 1025, 2066
HincII	GTYRAC	2 cut(s)	499, 1044
HindII	GTYRAC	2 cut(s)	499, 1044
HindIII	AAGCTT	3 cut(s)	883, 1334, 1877
HpaII	CCGG	4 cut(s)	263, 504, 715, 2077
HphI	GGTGA	8 cut(s)	541, 890, 1076, 1193, 1303, 1658, 2159, 2267
Hpy166II	GTNNAC	4 cut(s)	64, 426, 499, 1044
Hpy8I	GTNNAC	4 cut(s)	64, 426, 499, 1044
Hpy99I	CGWCG	3 cut(s)	74, 446, 479
HpyCH4III	ACNGT	6 cut(s)	256, 430, 1015, 1147, 1158, 1561
HpyCH4IV	ACGT	2 cut(s)	90, 477
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 65, 157, 446, 470, 479, 746, 755
HpyF3I	CTNAG	5 cut(s)	635, 1266, 1875, 2091, 2229
HpySE526I	ACGT	2 cut(s)	90, 477
Hsp92I	GRCGYC	3 cut(s)	387, 438, 501
Hsp92II	CATG	5 cut(s)	662, 959, 1427, 1477, 2370
HspAI	GCGC	7 cut(s)	395, 449, 720, 761, 953, 1025, 2066
Kzo9I	GATC	4 cut(s)	531, 1510, 1944, 2212
LguI	GCTCTTC	2 cut(s)	787, 1253
LmnI	GCTCC	8 cut(s)	237, 299, 676, 689, 717, 976, 1034, 1234
Lsp1109I	GCAGC	4 cut(s)	1161, 1905, 2144, 2312
LweI	GCATC	1 cut(s)	1915
MaeI	CTAG	8 cut(s)	308, 543, 669, 1320, 1572, 1737, 2099, 2129
MaeII	ACGT	2 cut(s)	90, 477
MaeIII	GTNAC	4 cut(s)	91, 994, 1352, 2197
MalI	GATC	4 cut(s)	533, 1512, 1946, 2214
MbiI	CCGCTC	1 cut(s)	1849
MboI	GATC	4 cut(s)	531, 1510, 1944, 2212
MflI	RGATCY	1 cut(s)	1944
MhlI	GDGCHC	3 cut(s)	296, 315, 1265
MlsI	TGGCCA	1 cut(s)	2186
MluNI	TGGCCA	1 cut(s)	2186
MlyI	GAGTC	7 cut(s)	33, 95, 114, 1320, 1487, 2011, 2043
MmeI	TCCRAC	7 cut(s)	7, 333, 708, 783, 1197, 1659, 1671
Mox20I	TGGCCA	1 cut(s)	2186
Mph1103I	ATGCAT	1 cut(s)	2368
MscI	TGGCCA	1 cut(s)	2186
MslI	CAYNNNNRTG	1 cut(s)	1472
Msp20I	TGGCCA	1 cut(s)	2186
MspA1I	CMGCKG	1 cut(s)	2303
MspCI	CTTAAG	3 cut(s)	899, 1804, 2348
MspI	CCGG	4 cut(s)	263, 504, 715, 2077
MspR9I	CCNGG	9 cut(s)	263, 505, 715, 724, 1523, 1940, 2077, 2078, 2239
Mva1269I	GAATGC	2 cut(s)	1090, 2368
MvaI	CCWGG	4 cut(s)	724, 1523, 1940, 2239
MvnI	CGCG	2 cut(s)	446, 521
MwoI	GCNNNNNNNGC	8 cut(s)	11, 65, 157, 446, 470, 479, 746, 755
NciI	CCSGG	5 cut(s)	263, 505, 715, 2077, 2078
NdeII	GATC	4 cut(s)	531, 1510, 1944, 2212
NlaIII	CATG	5 cut(s)	662, 959, 1427, 1477, 2370
NlaIV	GGNNCC	6 cut(s)	295, 691, 712, 1254, 1429, 1587
NmuCI	GTSAC	4 cut(s)	91, 994, 1352, 2197
NsbI	TGCGCA	2 cut(s)	954, 2067
NsiI	ATGCAT	1 cut(s)	2368
NspI	RCATGY	2 cut(s)	662, 959
NspV	TTCGAA	2 cut(s)	268, 924
PaeI	GCATGC	2 cut(s)	662, 959
PciSI	GCTCTTC	2 cut(s)	787, 1253
PcsI	WCGNNNNNNNCGW	4 cut(s)	96, 321, 330, 614
PctI	GAATGC	2 cut(s)	1090, 2368
PfeI	GAWTC	6 cut(s)	197, 270, 368, 613, 2225, 2233
PflFI	GACNNNGTC	1 cut(s)	440
PfoI	TCCNGGA	1 cut(s)	713
PleI	GAGTC	7 cut(s)	32, 95, 114, 1320, 1487, 2010, 2042
PpsI	GAGTC	7 cut(s)	32, 95, 114, 1320, 1487, 2010, 2042
PpuMI	RGGWCCY	1 cut(s)	2095
PshAI	GACNNNNGTC	3 cut(s)	783, 2001, 2093
Psp124BI	GAGCTC	1 cut(s)	1265
Psp5II	RGGWCCY	1 cut(s)	2095
Psp6I	CCWGG	4 cut(s)	722, 1521, 1938, 2237
PspFI	CCCAGC	1 cut(s)	2303
PspGI	CCWGG	4 cut(s)	722, 1521, 1938, 2237
PspN4I	GGNNCC	6 cut(s)	295, 691, 712, 1254, 1429, 1587
PspPI	GGNCC	5 cut(s)	7, 403, 1252, 1586, 2095
PspPPI	RGGWCCY	1 cut(s)	2095
PstI	CTGCAG	1 cut(s)	1179
PsuI	RGATCY	1 cut(s)	1944
PsyI	GACNNNGTC	1 cut(s)	440
PvuII	CAGCTG	1 cut(s)	2303
RsaI	GTAC	6 cut(s)	253, 383, 515, 1155, 1348, 1834
RsaNI	GTAC	6 cut(s)	252, 382, 514, 1154, 1347, 1833
RseI	CAYNNNNRTG	1 cut(s)	1472
SacI	GAGCTC	1 cut(s)	1265
SapI	GCTCTTC	2 cut(s)	787, 1253
Sau3AI	GATC	4 cut(s)	531, 1510, 1944, 2212
Sau96I	GGNCC	5 cut(s)	7, 403, 1252, 1586, 2095
SchI	GAGTC	7 cut(s)	33, 95, 114, 1320, 1487, 2011, 2043
ScrFI	CCNGG	9 cut(s)	263, 505, 715, 724, 1523, 1940, 2077, 2078, 2239
SduI	GDGCHC	3 cut(s)	296, 315, 1265
SfaNI	GCATC	1 cut(s)	1915
SfcI	CTRYAG	3 cut(s)	781, 1175, 1920
SfuI	TTCGAA	2 cut(s)	268, 924
SinI	GGWCC	4 cut(s)	403, 1252, 1586, 2095
SmaI	CCCGGG	1 cut(s)	2078
SmiMI	CAYNNNNRTG	1 cut(s)	1472
SmlI	CTYRAG	7 cut(s)	146, 300, 886, 899, 1804, 1999, 2348
SmoI	CTYRAG	7 cut(s)	146, 300, 886, 899, 1804, 1999, 2348
SphI	GCATGC	2 cut(s)	662, 959
SspI	AATATT	1 cut(s)	1639
SspMI	CTAG	8 cut(s)	308, 543, 669, 1320, 1572, 1737, 2099, 2129
SstI	GAGCTC	1 cut(s)	1265
StyD4I	CCNGG	9 cut(s)	261, 503, 713, 722, 1521, 1938, 2075, 2076, 2237
StyI	CCWWGG	2 cut(s)	307, 750
TaaI	ACNGT	6 cut(s)	256, 430, 1015, 1147, 1158, 1561
TaiI	ACGT	2 cut(s)	93, 480
TaqII	GACCGA	1 cut(s)	347
TauI	GCSGC	7 cut(s)	278, 281, 419, 449, 521, 758, 761
TfiI	GAWTC	6 cut(s)	197, 270, 368, 613, 2225, 2233
TscAI	CASTG	6 cut(s)	21, 822, 966, 1020, 1548, 1935
TseFI	GTSAC	4 cut(s)	91, 994, 1352, 2197
TseI	GCWGC	4 cut(s)	1174, 1893, 2132, 2300
Tsp45I	GTSAC	4 cut(s)	91, 994, 1352, 2197
TspDTI	ATGAA	4 cut(s)	1329, 1905, 2058, 2286
TspGWI	ACGGA	2 cut(s)	178, 239
TspMI	CCCGGG	1 cut(s)	2076
TspRI	CASTG	6 cut(s)	21, 822, 966, 1020, 1548, 1935
Tth111I	GACNNNGTC	1 cut(s)	440
Vha464I	CTTAAG	3 cut(s)	899, 1804, 2348
VpaK11BI	GGWCC	4 cut(s)	403, 1252, 1586, 2095
XapI	RAATTY	5 cut(s)	286, 621, 682, 1718, 2177
XceI	RCATGY	2 cut(s)	662, 959
XmaI	CCCGGG	1 cut(s)	2076
XmaJI	CCTAGG	1 cut(s)	307
XmiI	GTMKAC	1 cut(s)	63
XspI	CTAG	8 cut(s)	308, 543, 669, 1320, 1572, 1737, 2099, 2129
Zsp2I	ATGCAT	1 cut(s)	2368

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.