Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0009653

Physical Location & Seq

Genomic Coordinates Forward (+)

1004750 .. 1007526

Gene Structure 2777 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G012300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 867 bp

ATGGCAAGCCCAATGACGCCGTCCCATGTTGTTATTGCCTATGATGCGACCAGGGACAGGGGTGAGCTGGAGCTTAAGCTCCCTGTCGATAGTCTTCGAATGAGGGGTGACATTTTACATTCAGGAGATACCATCATTTTCCTGGGCGTCTTGCACAGGGTGGTTCACCCCATGGGATATCAATCAAAACCATCCCCAGAATTTTTTGGAACAAGCATTCGTGCAGTGGAGGAAGAAGTTACAAAGAAAGTTGACGTGTATGTTAACATGCTTCTTCAAAGTGCGGAAAAGTGTGAAGATCAAGGGGTCAGCGTTGAAGTCAAAGTTACTGCTGGTTTTCCCATTAAACAGGTTATTTTGCAAGAGATTATGGCCTGTAATGCAGCTTGGGTTGTGCTTGATAGGCACCTTAGACGGGATTTGAGGTTCTTCCTTAAGCAGATACCTTGCAAGGTTGCAATAATTCAAGATAGCTTGGCTGTGGATGTTGTGAGACCTCGTACAGCAGATGATACTGATACTATAGAACACAAATTGTTTTATTCATTATCCAAGCCTGTTCCGCCATTCACTTGCCCAGGTAATGGAAACAATGAGCACTCATCCATCGCTTGCAGAAGCTACTCTGTATCCGTTGGTGCACTGGAAAGCTCTGATATGCTTAATAACAACTTGATGCCTTCATCTACATTTAAGCTACGAGACTATAGTCCTTTGTTGGATCTAGCGTCTTCCTCTAAGCAAGAAAATTCAGGTCCGAAGCTTGTCATAGTCCTTTATGCATATTATAATGCTTTACAAACTCAAGACATACATTATGCATATTATAATGCTTTACAAACTCAAGACATATATTGTCCTTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

289

Amino Acids

32.25

Weight (kDa)

5.91

Isoelectric Point (pI)

54.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009653)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g15260
malus_domestica	MD05G1010000.v1.1 MD10G1008700.v1.1
prunus_persica	Prupe.8G012200_v2.0.a1 Prupe.8G012300_v2.0.a1 Prupe.8G012500_v2.0.a1
pyrus_communis	pycom05g00520 pycom10g00520
rosa_chinensis	RchiOBHm_Chr6g0277981
rosa_laevigata	RLG00000013250
rosa_multiflora	Rmu_sc0001474.1_g000022
rosa_roxburghii	Rroxscaffold_7G00190610 Rroxscaffold_7G00190620
rosa_rugosa	Rorug06G0113500 Rorug06G0113600 Rorug06G0113700 Rorug06G0113800
rosa_samantha	Rh6AG223500 Rh6BG227700 Rh6CG230200 Rh6DG221000
rosa_wichuraiana	Rw6G019530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	789, 828
AccB1I	GGYRCC	1 cut(s)	405
AccB7I	CCANNNNNTGG	1 cut(s)	584
AciI	CCGC	2 cut(s)	284, 563
AclWI	GGATC	1 cut(s)	729
AcsI	RAATTY	2 cut(s)	200, 748
AcyI	GRCGYC	2 cut(s)	17, 147
AdeI	CACNNNGTG	1 cut(s)	160
AfaI	GTAC	1 cut(s)	502
AfiI	CCNNNNNNNGG	3 cut(s)	57, 415, 584
AflII	CTTAAG	2 cut(s)	74, 434
AflIII	ACRYGT	1 cut(s)	255
AgsI	TTSAA	3 cut(s)	278, 317, 467
AjiI	CACGTC	1 cut(s)	256
AjnI	CCWGG	3 cut(s)	50, 141, 577
AloI	GAACNNNNNNTCC	2 cut(s)	410, 442
AluBI	AGCT	9 cut(s)	67, 73, 79, 386, 474, 621, 651, 697, 763
AluI	AGCT	9 cut(s)	67, 73, 79, 386, 474, 621, 651, 697, 763
Alw21I	GWGCWC	2 cut(s)	600, 643
Alw26I	GTCTC	2 cut(s)	487, 696
Alw44I	GTGCAC	1 cut(s)	639
AlwI	GGATC	1 cut(s)	729
AoxI	GGCC	1 cut(s)	372
ApaLI	GTGCAC	1 cut(s)	639
ApeKI	GCWGC	1 cut(s)	383
ApoI	RAATTY	2 cut(s)	200, 748
AspS9I	GGNCC	1 cut(s)	755
AsuHPI	GGTGA	3 cut(s)	74, 119, 158
AsuII	TTCGAA	1 cut(s)	97
AvaII	GGWCC	1 cut(s)	755
BaeGI	GKGCMC	1 cut(s)	643
BanI	GGYRCC	1 cut(s)	405
BbsI	GAAGAC	2 cut(s)	86, 723
Bbv12I	GWGCWC	2 cut(s)	600, 643
BbvI	GCAGC	1 cut(s)	395
BccI	CCATC	3 cut(s)	140, 199, 614
BceAI	ACGGC	1 cut(s)	4
BciT130I	CCWGG	3 cut(s)	52, 143, 579
BciVI	GTATCC	1 cut(s)	640
BcoDI	GTCTC	2 cut(s)	487, 696
BfaI	CTAG	1 cut(s)	725
BfmI	CTRYAG	2 cut(s)	522, 706
BfrI	CTTAAG	2 cut(s)	74, 434
BfuI	GTATCC	1 cut(s)	640
BisI	GCNGC	1 cut(s)	384
BlsI	GCNGC	1 cut(s)	385
Bme1390I	CCNGG	3 cut(s)	52, 143, 579
Bme18I	GGWCC	1 cut(s)	755
BmgBI	CACGTC	1 cut(s)	256
BmgT120I	GGNCC	1 cut(s)	755
BmiI	GGNNCC	1 cut(s)	407
BmrFI	CCNGG	3 cut(s)	52, 143, 579
BmsI	GCATC	2 cut(s)	34, 666
BoxI	GACNNNNGTC	1 cut(s)	708
BpiI	GAAGAC	2 cut(s)	86, 723
BpmI	CTGGAG	1 cut(s)	89
Bpu14I	TTCGAA	1 cut(s)	97
BpuEI	CTTGAG	2 cut(s)	789, 828
BsaBI	GATNNNNATC	1 cut(s)	181
BsaHI	GRCGYC	2 cut(s)	17, 147
BsaI	GGTCTC	1 cut(s)	487
BsaJI	CCNNGG	4 cut(s)	51, 142, 171, 577
Bsc4I	CCNNNNNNNGG	3 cut(s)	57, 415, 584
Bse1I	ACTGG	1 cut(s)	648
Bse8I	GATNNNNATC	1 cut(s)	181
BseBI	CCWGG	3 cut(s)	52, 143, 579
BseDI	CCNNGG	4 cut(s)	51, 142, 171, 577
BseGI	GGATG	3 cut(s)	191, 490, 602
BseJI	GATNNNNATC	1 cut(s)	181
BseLI	CCNNNNNNNGG	3 cut(s)	57, 415, 584
BseNI	ACTGG	1 cut(s)	648
BseSI	GKGCMC	1 cut(s)	643
BseXI	GCAGC	1 cut(s)	395
BsgI	GTGCAG	1 cut(s)	243
BshFI	GGCC	1 cut(s)	374
BshNI	GGYRCC	1 cut(s)	405
BsiHKAI	GWGCWC	2 cut(s)	600, 643
BslFI	GGGAC	2 cut(s)	7, 68
BslI	CCNNNNNNNGG	3 cut(s)	57, 415, 584
BsmAI	GTCTC	2 cut(s)	487, 696
BsmFI	GGGAC	2 cut(s)	7, 68
BsmI	GAATGC	1 cut(s)	216
BsnI	GGCC	1 cut(s)	374
Bso31I	GGTCTC	1 cut(s)	487
Bsp119I	TTCGAA	1 cut(s)	97
Bsp1286I	GDGCHC	2 cut(s)	600, 643
Bsp143I	GATC	2 cut(s)	298, 721
Bsp19I	CCATGG	1 cut(s)	171
BspACI	CCGC	2 cut(s)	284, 563
BspANI	GGCC	1 cut(s)	374
BspLI	GGNNCC	1 cut(s)	407
BspPI	GGATC	1 cut(s)	729
BspT104I	TTCGAA	1 cut(s)	97
BspT107I	GGYRCC	1 cut(s)	405
BspTI	CTTAAG	2 cut(s)	74, 434
BspTNI	GGTCTC	1 cut(s)	487
BsrI	ACTGG	1 cut(s)	648
BssECI	CCNNGG	4 cut(s)	51, 142, 171, 577
BssMI	GATC	2 cut(s)	298, 721
BssNI	GRCGYC	2 cut(s)	17, 147
BssT1I	CCWWGG	1 cut(s)	171
Bst2UI	CCWGG	3 cut(s)	52, 143, 579
BstACI	GRCGYC	2 cut(s)	17, 147
BstAFI	CTTAAG	2 cut(s)	74, 434
BstBI	TTCGAA	1 cut(s)	97
BstC8I	GCNNGC	2 cut(s)	7, 613
BstDEI	CTNAG	2 cut(s)	410, 738
BstDSI	CCRYGG	1 cut(s)	171
BstF5I	GGATG	3 cut(s)	191, 490, 602
BstKTI	GATC	2 cut(s)	301, 724
BstMAI	GTCTC	2 cut(s)	487, 696
BstMBI	GATC	2 cut(s)	298, 721
BstMWI	GCNNNNNNNGC	4 cut(s)	44, 380, 403, 562
BstNI	CCWGG	3 cut(s)	52, 143, 579
BstNSI	RCATGY	1 cut(s)	271
BstPAI	GACNNNNGTC	1 cut(s)	708
BstSCI	CCNGG	3 cut(s)	50, 141, 577
BstSFI	CTRYAG	2 cut(s)	522, 706
BstSLI	GKGCMC	1 cut(s)	643
BstV1I	GCAGC	1 cut(s)	395
BstV2I	GAAGAC	2 cut(s)	86, 723
BstX2I	RGATCY	1 cut(s)	721
BstYI	RGATCY	1 cut(s)	721
BsuI	GTATCC	1 cut(s)	640
BsuRI	GGCC	1 cut(s)	374
BtgI	CCRYGG	1 cut(s)	171
BtgZI	GCGATG	1 cut(s)	592
BtrI	CACGTC	1 cut(s)	256
BtsCI	GGATG	3 cut(s)	191, 490, 602
BtsI	GCAGTG	1 cut(s)	231
BtsIMutI	CAGTG	2 cut(s)	231, 641
Cac8I	GCNNGC	2 cut(s)	7, 613
Cfr13I	GGNCC	1 cut(s)	755
CseI	GACGC	3 cut(s)	25, 136, 717
Csp6I	GTAC	1 cut(s)	501
CviAII	CATG	3 cut(s)	26, 172, 268
CviQI	GTAC	1 cut(s)	501
DdeI	CTNAG	2 cut(s)	410, 738
DpnI	GATC	2 cut(s)	300, 723
DpnII	GATC	2 cut(s)	298, 721
DraIII	CACNNNGTG	1 cut(s)	160
EciI	GGCGGA	1 cut(s)	552
Eco130I	CCWWGG	1 cut(s)	171
Eco31I	GGTCTC	1 cut(s)	487
Eco32I	GATATC	1 cut(s)	179
Eco47I	GGWCC	1 cut(s)	755
EcoRII	CCWGG	3 cut(s)	50, 141, 577
EcoRV	GATATC	1 cut(s)	179
EcoT14I	CCWWGG	1 cut(s)	171
EcoT22I	ATGCAT	2 cut(s)	784, 823
ErhI	CCWWGG	1 cut(s)	171
FaeI	CATG	3 cut(s)	29, 175, 271
FaqI	GGGAC	2 cut(s)	7, 68
FatI	CATG	3 cut(s)	25, 171, 267
Fnu4HI	GCNGC	1 cut(s)	384
FokI	GGATG	3 cut(s)	178, 497, 589
Fsp4HI	GCNGC	1 cut(s)	384
FspBI	CTAG	1 cut(s)	725
GluI	GCNGC	1 cut(s)	384
GsuI	CTGGAG	1 cut(s)	89
HaeIII	GGCC	1 cut(s)	374
HgaI	GACGC	3 cut(s)	25, 136, 717
Hin1I	GRCGYC	2 cut(s)	17, 147
Hin1II	CATG	3 cut(s)	29, 175, 271
HincII	GTYRAC	2 cut(s)	253, 265
HindII	GTYRAC	2 cut(s)	253, 265
HindIII	AAGCTT	1 cut(s)	761
HpaI	GTTAAC	1 cut(s)	265
HphI	GGTGA	3 cut(s)	74, 119, 158
Hpy166II	GTNNAC	4 cut(s)	166, 253, 265, 641
Hpy188I	TCNGA	3 cut(s)	655, 759, 866
Hpy188III	TCNNGA	4 cut(s)	123, 467, 806, 845
Hpy8I	GTNNAC	4 cut(s)	166, 253, 265, 641
HpyAV	CCTTC	1 cut(s)	690
HpyCH4IV	ACGT	1 cut(s)	255
HpyF10VI	GCNNNNNNNGC	4 cut(s)	44, 380, 403, 562
HpyF3I	CTNAG	2 cut(s)	410, 738
HpySE526I	ACGT	1 cut(s)	255
Hsp92I	GRCGYC	2 cut(s)	17, 147
Hsp92II	CATG	3 cut(s)	29, 175, 271
KspAI	GTTAAC	1 cut(s)	265
Kzo9I	GATC	2 cut(s)	298, 721
LmnI	GCTCC	2 cut(s)	70, 84
Lsp1109I	GCAGC	1 cut(s)	395
LweI	GCATC	2 cut(s)	34, 666
MaeI	CTAG	1 cut(s)	725
MaeII	ACGT	1 cut(s)	255
MaeIII	GTNAC	3 cut(s)	107, 238, 325
MalI	GATC	2 cut(s)	300, 723
MboI	GATC	2 cut(s)	298, 721
MboII	GAAGA	6 cut(s)	86, 245, 266, 308, 421, 723
MflI	RGATCY	1 cut(s)	721
MhlI	GDGCHC	2 cut(s)	600, 643
MluCI	AATT	4 cut(s)	200, 462, 533, 748
MmeI	TCCRAC	1 cut(s)	699
MnlI	CCTC	5 cut(s)	96, 223, 417, 507, 745
Mph1103I	ATGCAT	2 cut(s)	784, 823
MseI	TTAA	6 cut(s)	75, 264, 345, 435, 663, 693
MspCI	CTTAAG	2 cut(s)	74, 434
MspR9I	CCNGG	3 cut(s)	52, 143, 579
Mva1269I	GAATGC	1 cut(s)	216
MvaI	CCWGG	3 cut(s)	52, 143, 579
MwoI	GCNNNNNNNGC	4 cut(s)	44, 380, 403, 562
NcoI	CCATGG	1 cut(s)	171
NdeII	GATC	2 cut(s)	298, 721
NlaIII	CATG	3 cut(s)	29, 175, 271
NlaIV	GGNNCC	1 cut(s)	407
NmuCI	GTSAC	1 cut(s)	107
NsiI	ATGCAT	2 cut(s)	784, 823
NspI	RCATGY	1 cut(s)	271
NspV	TTCGAA	1 cut(s)	97
PctI	GAATGC	1 cut(s)	216
PflFI	GACNNNGTC	1 cut(s)	19
PflMI	CCANNNNNTGG	1 cut(s)	584
PkrI	GCNGC	1 cut(s)	385
PshAI	GACNNNNGTC	1 cut(s)	708
PsiI	TTATAA	2 cut(s)	789, 828
Psp6I	CCWGG	3 cut(s)	50, 141, 577
PspGI	CCWGG	3 cut(s)	50, 141, 577
PspN4I	GGNNCC	1 cut(s)	407
PspPI	GGNCC	1 cut(s)	755
PsuI	RGATCY	1 cut(s)	721
PsyI	GACNNNGTC	1 cut(s)	19
RsaI	GTAC	1 cut(s)	502
RsaNI	GTAC	1 cut(s)	501
SaqAI	TTAA	6 cut(s)	75, 264, 345, 435, 663, 693
SatI	GCNGC	1 cut(s)	384
Sau3AI	GATC	2 cut(s)	298, 721
Sau96I	GGNCC	1 cut(s)	755
ScrFI	CCNGG	3 cut(s)	52, 143, 579
SduI	GDGCHC	2 cut(s)	600, 643
SfaNI	GCATC	2 cut(s)	34, 666
SfcI	CTRYAG	2 cut(s)	522, 706
SfuI	TTCGAA	1 cut(s)	97
SinI	GGWCC	1 cut(s)	755
SmlI	CTYRAG	4 cut(s)	74, 434, 804, 843
SmoI	CTYRAG	4 cut(s)	74, 434, 804, 843
Sse9I	AATT	4 cut(s)	200, 462, 533, 748
SsiI	CCGC	2 cut(s)	284, 563
SspMI	CTAG	1 cut(s)	725
StyD4I	CCNGG	3 cut(s)	50, 141, 577
StyI	CCWWGG	1 cut(s)	171
TaiI	ACGT	1 cut(s)	258
TaqI	TCGA	2 cut(s)	87, 97
TasI	AATT	4 cut(s)	200, 462, 533, 748
Tru1I	TTAA	6 cut(s)	75, 264, 345, 435, 663, 693
Tru9I	TTAA	6 cut(s)	75, 264, 345, 435, 663, 693
TscAI	CASTG	2 cut(s)	231, 648
TseFI	GTSAC	1 cut(s)	107
TseI	GCWGC	1 cut(s)	383
Tsp45I	GTSAC	1 cut(s)	107
TspDTI	ATGAA	2 cut(s)	534, 672
TspGWI	ACGGA	1 cut(s)	622
TspRI	CASTG	2 cut(s)	231, 648
Tth111I	GACNNNGTC	1 cut(s)	19
Van91I	CCANNNNNTGG	1 cut(s)	584
Vha464I	CTTAAG	2 cut(s)	74, 434
VneI	GTGCAC	1 cut(s)	639
VpaK11BI	GGWCC	1 cut(s)	755
XapI	RAATTY	2 cut(s)	200, 748
XceI	RCATGY	1 cut(s)	271
XcmI	CCANNNNNNNNNTGG	1 cut(s)	139
XspI	CTAG	1 cut(s)	725
Zsp2I	ATGCAT	2 cut(s)	784, 823

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.