pycom10g00520

proline-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
555454 .. 561666
6213 bp
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UTR
Exon/CDS
Intron
pycom10g00520.6

Sequence Viewer

Length: 1809 bp
ATGGCGAGCCCTCTGACGCCATCCCACGTTGTCATCGCCTATGACGCCACCAAGGACCGCGGCGTGCATGAGCTTACGCTCGCAGTTGACGGTCTCCAGAAGAGGGGTGACGTTTTGCATTCAGGGGATACCATCATTGTGCTTGGAGTTTTGCACAGGGTCGTCCACCCCATGGGATTTCCCACAAAACCATGCACAGATTTTTGGGAAACTAGCATTCGTGCAGTGGAGGAAGAAGTTACAAAGAAAGTTGACATGTATGTTAGCATGCTTCTTGAAAGCGCGAGAAAGTGTGAAGATCAAGGGGTCAGCATTGAAGTCAAAGTTACTGCTGGTTTTCCCATTAAGCAGGTTATTTTGCAAGAGATTATGGCCTGCAATGCAGCTTGGGTTATACTTGATAGGCACCTTAGACGGGATTTGAGGTTCTACCTTAAGAAGATACCATGCAAGGTTGCAGTAATTCAAGATAGTTTGGCTGTGGATGTTGTAAGACCTCATACAACGGATGACACTGATACCATAGAACACAAATTGTTTTTTTCATTGTCCAAGCCTGTTCCACTATCCAATTATCAATCTAACAGAATCAATGAACAGCCACTCATTGATTCACCTGAAAGTTCTGATATTCAGAAAACCTATTTAACTTCACCTACTGTTACTTCACCTACAGTTAAGTTACGAGACTATTGTTCTTTGTTGAATCTGGGGTCTTCCCCTGTGCAAGAAAATTCAGGTGTAAAACCCAAAGCAGACGATAAACACTTCATAGTTCCTCAAAAAATCCAGAAGCAAAATAACGACTCCTTCCGAGGAAGATGCTCAGATGCCCCAATTCTGTGTTCCATATGTGGAACAAGGACTGAAATGTATGTCAAGAATTCTATGACATTCAGCTACTCAGAGATACAGCTTGCAACAAATGATTTTTCCAAGGAAAATTTATTAGGAGAAGGTGGATATGGTCATGTGTATAAAGGTGAGCTTAAGGACGGACAGCAAATTGCAGCAAAGGTGCGGAAAGAAGCAAGTACACAAGGATTTACAGAATTTCACTCTGAGGTCCATGTCTTGAGTTTTGCACGCCATAAGAACATTGTCATGCTGTTGGGTTATTGTTGCAAGGAGAACCTAAATATATTGGTTTATGAATATATTTGCCACAAGTCTCTTGAATGGCACTTATTTGATGAAAAGGCAGCAGTTCTTGAGTGGCACCAAAGACAGGAAATCGCCATTGGAACTGCGAAGGGATTGCGTTTCCTCCACGAAGAATGTCGTGGAAGTCCTATAATTCATCGAGACACGCGACCAAGCAATATACTGCTAACACATGATTACGTTCCAATGTTAGGTGATTTTGGCTTAGCCAAATGGAAGACGGCGAGGGATGACACTGACCAGACAAGGATACTTGGCACGCTAGGCTACCTTGCTCCAGAGTATGCAGAGAACGGTATTGTTTCTGTACGGACAGATGTGTATGCCTTTGGCATGGTTCTGTTACAACTCGTAACCGGCCGCAAGATTGTTGATTCAAACGGAGAAGGGCAAGCTCAATCCCTACGGGAGTGGGCAGAACCAATAATCCAGAGGCTGGCACTACATGAACTCATTGATCGTCGTCTAGGAGATTCATATGACACATATGAAGTGTACCTTATGGCTAAAACCGCATTCTTATGTGTACAAAGAAATCCTGAAATGCGTCCATCAATGCGAGAGGTTGTCCGCGTTCTTGAAGGTGAAAATGACAATTACCACCACCTAGCAGAGCACTTTGCACCTCAATATCTCACAAAGTGA

Protein Analysis

603

Amino Acids

68.17

Weight (kDa)

6.3

Isoelectric Point (pI)

39.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 340
AccB1I GGYRCC 2 cut(s) 405, 1218
AccB7I CCANNNNNTGG 2 cut(s) 172, 1600
AccII CGCG 4 cut(s) 60, 284, 1312, 1737
AciI CCGC 6 cut(s) 58, 60, 1021, 1525, 1677, 1735
AcoI YGGCCR 1 cut(s) 1522
AcsI RAATTY 4 cut(s) 733, 883, 943, 1052
AcyI GRCGYC 2 cut(s) 17, 45
AdeI CACNNNGTG 1 cut(s) 1806
AfaI GTAC 4 cut(s) 1036, 1473, 1661, 1692
AfiI CCNNNNNNNGG 6 cut(s) 103, 172, 415, 1228, 1355, 1600
AflII CTTAAG 2 cut(s) 434, 989
AflIII ACRYGT 1 cut(s) 255
AgsI TTSAA 7 cut(s) 278, 317, 467, 706, 1178, 1542, 1745
AjuI GAANNNNNNNTTGG 4 cut(s) 829, 861, 1224, 1256
AloI GAACNNNNNNTCC 4 cut(s) 410, 442, 1575, 1607
AluBI AGCT 6 cut(s) 73, 386, 900, 916, 988, 1559
AluI AGCT 6 cut(s) 73, 386, 900, 916, 988, 1559
Alw21I GWGCWC 1 cut(s) 1782
Alw26I GTCTC 4 cut(s) 98, 681, 1176, 1299
AlwNI CAGNNNCTG 1 cut(s) 1600
AoxI GGCC 2 cut(s) 372, 1522
ApeKI GCWGC 3 cut(s) 383, 1010, 1202
ApoI RAATTY 4 cut(s) 733, 883, 943, 1052
AspLEI GCGC 1 cut(s) 284
AspS9I GGNCC 2 cut(s) 55, 1066
AsuHPI GGTGA 7 cut(s) 119, 606, 645, 660, 995, 1370, 1760
AvaII GGWCC 2 cut(s) 55, 1066
BanI GGYRCC 2 cut(s) 405, 1218
BanII GRGCYC 1 cut(s) 11
BbsI GAAGAC 2 cut(s) 708, 1388
Bbv12I GWGCWC 1 cut(s) 1782
BbvI GCAGC 3 cut(s) 395, 1022, 1214
BccI CCATC 3 cut(s) 28, 140, 1723
BceAI ACGGC 1 cut(s) 1401
BcgI CGANNNNNNTGC 4 cut(s) 804, 838, 1240, 1274
BciVI GTATCC 2 cut(s) 121, 1407
BcoDI GTCTC 4 cut(s) 98, 681, 1176, 1299
BfaI CTAG 4 cut(s) 213, 1427, 1631, 1772
BfmI CTRYAG 1 cut(s) 672
BfrI CTTAAG 2 cut(s) 434, 989
BfuAI ACCTGC 1 cut(s) 340
BfuI GTATCC 2 cut(s) 121, 1407
BisI GCNGC 5 cut(s) 61, 384, 1011, 1203, 1525
BlpI GCTNAGC 1 cut(s) 1369
BlsI GCNGC 5 cut(s) 62, 385, 1012, 1204, 1526
Bme18I GGWCC 2 cut(s) 55, 1066
BmgT120I GGNCC 2 cut(s) 55, 1066
BmiI GGNNCC 2 cut(s) 407, 1220
BmsI GCATC 2 cut(s) 812, 820
BpiI GAAGAC 2 cut(s) 708, 1388
BpmI CTGGAG 2 cut(s) 80, 1425
Bpu1102I GCTNAGC 1 cut(s) 1369
BpuEI CTTGAG 2 cut(s) 1096, 1232
BsaHI GRCGYC 2 cut(s) 17, 45
BsaI GGTCTC 1 cut(s) 98
BsaJI CCNNGG 5 cut(s) 51, 58, 171, 814, 936
Bsc4I CCNNNNNNNGG 6 cut(s) 103, 172, 415, 1228, 1355, 1600
Bse118I RCCGGY 1 cut(s) 1520
Bse3DI GCAATG 1 cut(s) 385
BseDI CCNNGG 5 cut(s) 51, 58, 171, 814, 936
BseGI GGATG 4 cut(s) 20, 490, 514, 1399
BseLI CCNNNNNNNGG 6 cut(s) 103, 172, 415, 1228, 1355, 1600
BseMI GCAATG 1 cut(s) 385
BseMII CTCAG 3 cut(s) 840, 918, 1053
BseX3I CGGCCG 1 cut(s) 1522
BseXI GCAGC 3 cut(s) 395, 1022, 1214
BsgI GTGCAG 1 cut(s) 243
Bsh1236I CGCG 4 cut(s) 60, 284, 1312, 1737
Bsh1285I CGRYCG 1 cut(s) 1525
BshFI GGCC 2 cut(s) 374, 1524
BshNI GGYRCC 2 cut(s) 405, 1218
BsiEI CGRYCG 1 cut(s) 1525
BsiHKAI GWGCWC 1 cut(s) 1782
BsiSI CCGG 1 cut(s) 1521
BslI CCNNNNNNNGG 6 cut(s) 103, 172, 415, 1228, 1355, 1600
BsmAI GTCTC 4 cut(s) 98, 681, 1176, 1299
BsmI GAATGC 3 cut(s) 118, 216, 1679
BsnI GGCC 2 cut(s) 374, 1524
Bso31I GGTCTC 1 cut(s) 98
Bsp1286I GDGCHC 2 cut(s) 11, 1782
Bsp1407I TGTACA 1 cut(s) 1690
Bsp143I GATC 2 cut(s) 298, 1621
Bsp1720I GCTNAGC 1 cut(s) 1369
Bsp19I CCATGG 1 cut(s) 171
BspACI CCGC 6 cut(s) 58, 60, 1021, 1525, 1677, 1735
BspANI GGCC 2 cut(s) 374, 1524
BspCNI CTCAG 3 cut(s) 839, 917, 1054
BspFNI CGCG 4 cut(s) 60, 284, 1312, 1737
BspLI GGNNCC 2 cut(s) 407, 1220
BspMI ACCTGC 1 cut(s) 340
BspT107I GGYRCC 2 cut(s) 405, 1218
BspTI CTTAAG 2 cut(s) 434, 989
BspTNI GGTCTC 1 cut(s) 98
BsrDI GCAATG 1 cut(s) 385
BsrFI RCCGGY 1 cut(s) 1520
BsrGI TGTACA 1 cut(s) 1690
BssAI RCCGGY 1 cut(s) 1520
BssECI CCNNGG 5 cut(s) 51, 58, 171, 814, 936
BssMI GATC 2 cut(s) 298, 1621
BssNI GRCGYC 2 cut(s) 17, 45
BssT1I CCWWGG 3 cut(s) 51, 171, 936
Bst4CI ACNGT 4 cut(s) 92, 661, 676, 1460
Bst6I CTCTTC 1 cut(s) 95
BstACI GRCGYC 2 cut(s) 17, 45
BstAFI CTTAAG 2 cut(s) 434, 989
BstAUI TGTACA 1 cut(s) 1690
BstDEI CTNAG 5 cut(s) 410, 826, 904, 1062, 1369
BstDSI CCRYGG 2 cut(s) 58, 171
BstF5I GGATG 4 cut(s) 20, 490, 514, 1399
BstFNI CGCG 4 cut(s) 60, 284, 1312, 1737
BstHHI GCGC 1 cut(s) 284
BstKTI GATC 2 cut(s) 301, 1624
BstMAI GTCTC 4 cut(s) 98, 681, 1176, 1299
BstMBI GATC 2 cut(s) 298, 1621
BstMCI CGRYCG 1 cut(s) 1525
BstMWI GCNNNNNNNGC 4 cut(s) 44, 380, 1428, 1676
BstNSI RCATGY 2 cut(s) 259, 271
BstSFI CTRYAG 1 cut(s) 672
BstUI CGCG 4 cut(s) 60, 284, 1312, 1737
BstV1I GCAGC 3 cut(s) 395, 1022, 1214
BstV2I GAAGAC 2 cut(s) 708, 1388
BstZI CGGCCG 1 cut(s) 1522
BsuI GTATCC 2 cut(s) 121, 1407
BsuRI GGCC 2 cut(s) 374, 1524
BtgI CCRYGG 2 cut(s) 58, 171
BtgZI GCGATG 1 cut(s) 19
BtsCI GGATG 4 cut(s) 20, 490, 514, 1399
BtsI GCAGTG 1 cut(s) 231
BtsIMutI CAGTG 3 cut(s) 231, 513, 1398
BveI ACCTGC 1 cut(s) 340
CaiI CAGNNNCTG 1 cut(s) 1600
CfoI GCGC 1 cut(s) 284
Cfr10I RCCGGY 1 cut(s) 1520
Cfr13I GGNCC 2 cut(s) 55, 1066
Cfr42I CCGCGG 1 cut(s) 61
CseI GACGC 3 cut(s) 25, 53, 1700
Csp6I GTAC 4 cut(s) 1035, 1472, 1660, 1691
CviQI GTAC 4 cut(s) 1035, 1472, 1660, 1691
DdeI CTNAG 5 cut(s) 410, 826, 904, 1062, 1369
DpnI GATC 2 cut(s) 300, 1623
DpnII GATC 2 cut(s) 298, 1621
DraIII CACNNNGTG 1 cut(s) 1806
EaeI YGGCCR 1 cut(s) 1522
EagI CGGCCG 1 cut(s) 1522
Eam1104I CTCTTC 1 cut(s) 95
EarI CTCTTC 1 cut(s) 95
EclXI CGGCCG 1 cut(s) 1522
Eco130I CCWWGG 3 cut(s) 51, 171, 936
Eco24I GRGCYC 1 cut(s) 11
Eco31I GGTCTC 1 cut(s) 98
Eco47I GGWCC 2 cut(s) 55, 1066
Eco52I CGGCCG 1 cut(s) 1522
EcoRI GAATTC 1 cut(s) 883
EcoT14I CCWWGG 3 cut(s) 51, 171, 936
EcoT38I GRGCYC 1 cut(s) 11
ErhI CCWWGG 3 cut(s) 51, 171, 936
FalI AAGNNNNNCTT 4 cut(s) 972, 1004, 1647, 1679
FauNDI CATATG 3 cut(s) 851, 1642, 1651
Fnu4HI GCNGC 5 cut(s) 61, 384, 1011, 1203, 1525
FokI GGATG 4 cut(s) 7, 497, 521, 1406
FriOI GRGCYC 1 cut(s) 11
Fsp4HI GCNGC 5 cut(s) 61, 384, 1011, 1203, 1525
FspBI CTAG 4 cut(s) 213, 1427, 1631, 1772
GlaI GCGC 1 cut(s) 283
GluI GCNGC 5 cut(s) 61, 384, 1011, 1203, 1525
GsuI CTGGAG 2 cut(s) 80, 1425
HaeIII GGCC 2 cut(s) 374, 1524
HapII CCGG 1 cut(s) 1521
HgaI GACGC 3 cut(s) 25, 53, 1700
HhaI GCGC 1 cut(s) 284
Hin1I GRCGYC 2 cut(s) 17, 45
Hin6I GCGC 1 cut(s) 282
HinP1I GCGC 1 cut(s) 282
HincII GTYRAC 2 cut(s) 88, 253
HindII GTYRAC 2 cut(s) 88, 253
HinfI GANTC 6 cut(s) 588, 611, 706, 806, 1538, 1637
HpaII CCGG 1 cut(s) 1521
HphI GGTGA 7 cut(s) 119, 606, 645, 660, 995, 1370, 1760
Hpy166II GTNNAC 6 cut(s) 88, 166, 253, 1037, 1660, 1691
Hpy188I TCNGA 7 cut(s) 15, 628, 636, 815, 829, 907, 1063
Hpy8I GTNNAC 6 cut(s) 88, 166, 253, 1037, 1660, 1691
Hpy99I CGWCG 1 cut(s) 1629
HpyAV CCTTC 5 cut(s) 820, 950, 1246, 1544, 1739
HpyCH4III ACNGT 4 cut(s) 92, 661, 676, 1460
HpyCH4IV ACGT 3 cut(s) 27, 111, 1344
HpyF10VI GCNNNNNNNGC 4 cut(s) 44, 380, 1428, 1676
HpyF3I CTNAG 5 cut(s) 410, 826, 904, 1062, 1369
HpySE526I ACGT 3 cut(s) 27, 111, 1344
Hsp92I GRCGYC 2 cut(s) 17, 45
HspAI GCGC 1 cut(s) 282
KspI CCGCGG 1 cut(s) 61
Kzo9I GATC 2 cut(s) 298, 1621
LmnI GCTCC 1 cut(s) 1444
Lsp1109I GCAGC 3 cut(s) 395, 1022, 1214
LweI GCATC 2 cut(s) 812, 820
MaeI CTAG 4 cut(s) 213, 1427, 1631, 1772
MaeII ACGT 3 cut(s) 27, 111, 1344
MaeIII GTNAC 7 cut(s) 107, 238, 325, 661, 681, 1506, 1516
MalI GATC 2 cut(s) 300, 1623
MboI GATC 2 cut(s) 298, 1621
MboII GAAGA 8 cut(s) 112, 245, 308, 451, 708, 831, 1286, 1393
MhlI GDGCHC 2 cut(s) 11, 1782
MlyI GAGTC 1 cut(s) 800
MseI TTAA 5 cut(s) 345, 435, 647, 678, 990
MslI CAYNNNNRTG 3 cut(s) 137, 1103, 1684
MspA1I CMGCKG 1 cut(s) 60
MspCI CTTAAG 2 cut(s) 434, 989
MspI CCGG 1 cut(s) 1521
Mva1269I GAATGC 3 cut(s) 118, 216, 1679
MvnI CGCG 4 cut(s) 60, 284, 1312, 1737
MwoI GCNNNNNNNGC 4 cut(s) 44, 380, 1428, 1676
NcoI CCATGG 1 cut(s) 171
NdeI CATATG 3 cut(s) 851, 1642, 1651
NdeII GATC 2 cut(s) 298, 1621
NlaIV GGNNCC 2 cut(s) 407, 1220
NmuCI GTSAC 1 cut(s) 107
NspI RCATGY 2 cut(s) 259, 271
PaeI GCATGC 1 cut(s) 271
PciI ACATGT 1 cut(s) 255
PcsI WCGNNNNNNNCGW 1 cut(s) 1309
PctI GAATGC 3 cut(s) 118, 216, 1679
PfeI GAWTC 5 cut(s) 588, 611, 706, 1538, 1637
PflMI CCANNNNNTGG 2 cut(s) 172, 1600
PkrI GCNGC 5 cut(s) 62, 385, 1012, 1204, 1526
PleI GAGTC 1 cut(s) 800
PpsI GAGTC 1 cut(s) 800
PscI ACATGT 1 cut(s) 255
PspN4I GGNNCC 2 cut(s) 407, 1220
PspPI GGNCC 2 cut(s) 55, 1066
PstNI CAGNNNCTG 1 cut(s) 1600
RsaI GTAC 4 cut(s) 1036, 1473, 1661, 1692
RsaNI GTAC 4 cut(s) 1035, 1472, 1660, 1691
RseI CAYNNNNRTG 3 cut(s) 137, 1103, 1684
SacII CCGCGG 1 cut(s) 61
SaqAI TTAA 5 cut(s) 345, 435, 647, 678, 990
SatI GCNGC 5 cut(s) 61, 384, 1011, 1203, 1525
Sau3AI GATC 2 cut(s) 298, 1621
Sau96I GGNCC 2 cut(s) 55, 1066
SchI GAGTC 1 cut(s) 800
SduI GDGCHC 2 cut(s) 11, 1782
SfaNI GCATC 2 cut(s) 812, 820
SfcI CTRYAG 1 cut(s) 672
Sfr303I CCGCGG 1 cut(s) 61
SgrBI CCGCGG 1 cut(s) 61
SinI GGWCC 2 cut(s) 55, 1066
SmiMI CAYNNNNRTG 3 cut(s) 137, 1103, 1684
SmlI CTYRAG 4 cut(s) 434, 989, 1075, 1211
SmoI CTYRAG 4 cut(s) 434, 989, 1075, 1211
SphI GCATGC 1 cut(s) 271
SsiI CCGC 6 cut(s) 58, 60, 1021, 1525, 1677, 1735
SspMI CTAG 4 cut(s) 213, 1427, 1631, 1772
StyI CCWWGG 3 cut(s) 51, 171, 936
TaaI ACNGT 4 cut(s) 92, 661, 676, 1460
TaiI ACGT 3 cut(s) 30, 114, 1347
TaqI TCGA 1 cut(s) 1303
TatI WGTACW 2 cut(s) 1034, 1690
TauI GCSGC 2 cut(s) 63, 1527
TfiI GAWTC 5 cut(s) 588, 611, 706, 1538, 1637
Tru1I TTAA 5 cut(s) 345, 435, 647, 678, 990
Tru9I TTAA 5 cut(s) 345, 435, 647, 678, 990
TscAI CASTG 3 cut(s) 231, 520, 1405
TseFI GTSAC 1 cut(s) 107
TseI GCWGC 3 cut(s) 383, 1010, 1202
Tsp45I GTSAC 1 cut(s) 107
TspDTI ATGAA 9 cut(s) 534, 609, 760, 1167, 1209, 1289, 1626, 1629, 1668
TspGWI ACGGA 4 cut(s) 521, 1011, 1489, 1560
TspRI CASTG 3 cut(s) 231, 520, 1405
Van91I CCANNNNNTGG 2 cut(s) 172, 1600
Vha464I CTTAAG 2 cut(s) 434, 989
VpaK11BI GGWCC 2 cut(s) 55, 1066
XapI RAATTY 4 cut(s) 733, 883, 943, 1052
XceI RCATGY 2 cut(s) 259, 271
XspI CTAG 4 cut(s) 213, 1427, 1631, 1772
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.