Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0007971

Physical Location & Seq

Genomic Coordinates Reverse (-)

7037268 .. 7041836

Gene Structure 4569 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G057300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2700 bp

ATGTTTTTTTCTCTGAGAAATTTATCCAAATCTAGGGCCAGCACCAACTACCACTATGTCTTCTCCTTGCTCAATGCCAATGGTTTTGTAAGCTCCGGTCCCTGCTCACCTTCTTCTTTCTGCTTTGGCCCTAGTGCTGCGTTTTCAACGACATCAACCGCCTGCTTGATCCAAGCCAAGGACGTCGTCCTCTCTTTCAAAGAATGGTTCAAGAGCCGCAACGACGCGTTGTTCGACCACATCTTCCAGATCCTCAAGACCACCGGAGACGATAACACCGTCCTCGACCTCGAGAACTCCAACGACTTGTCGTTTCATTATCACCACCGCTCCTCCGCCGACTTGGCGCTTGCCCATCTGAACCTCTGCCTCTCTGAGACCTTCGTCTTGGAGGTGCTCCGCTATGGTAGCAGCGGCCACGACGTCCTCTCCTGCCTCAAGTTCTTCGACTGGGTCGGCCGCCAGCCCGGCTTTAACCACACCCGCGCGACCTTCCACGCCATTTTCAAGATTCTTTCTCGCGCCAAGCTCATGTCACTGATGCTTGACTTCCTGTCCACGTACAGCAAGCAGAGGTATGCGCATAGGGTTCGATTTCGCGACACTTTGGTGATGGGTTATGCTGTGGCTGGCAAACCCGACATTGCACTCCAACTGTTTGGTAAAATGCGCTTTCAGGGGCTTGACCTGGATGTGTTTGCTTACCATGTTCTTTTGAATGCTTTGGTGGAAGAGAATTGTTTTGATGCTGTTCAGGTCATTGCCAAGCAGATTTCTTTGAGGGGTTTTGAGAACGAGATCACTCATTCCGTCATGCTCAAGTGCTATTGTAAGCAGAACTTGCTGGATGATGCTGAAAAGTACTTGCGTAAATTGTTGTCTGACGGGAGGGCCGTCAATGGGCATGCCGTGAGTGTTCTTGTTGATGCCCTTTGTAAGAATAATAAGTTCGAGCAGGCTGGGAAGTTGGTGGAGGAGTTTCAGGGCGCTGGGGTGGAACTCATGGAGAGTGTCTATGGTGTGTGGATACGTGATCTTGTTCAGGCTGGGAGGTTAGATGGGGCGTTGGAGTTTCTGCATGACAAGAGGTCATTGGAAGGGTATGTGCCTGATACTTTTAGGTACAATACTTTGATATGTAGGCTTTTGAGGGAGGATCGGCTTGAGGAGGTTTGTGATTTGTTGATGGAGATGAAGGATGGTCAGATTTGCCCTGATAAGGTCACCATGAATGCTGCCTTGTGCTTCTTTTGCAAAGCAGGAATGGTTGATGTTGCTCTTGAGTTGTATAATTCGAAATCTGAGTTTGGGCTCTCTCCTAATAGTTTGGCTTACAACTATTTGATCAATACTTTCTGTGGGGATGGCAGCGTGGATGAAGCATATGAAGTGTTGAAGAATTCTATAAAACAAGATTATTTTCCGGGTAGGAAAACATTTTCTATACTTGCAGATGCTTTGTGCAGAGAGGGAAAGCTCGATAAGATGAAGGAGTTGGTTATTTTTGCGCTAGAGCGAAACTTTATGCCAAGTGGTTCCACATACGATAAGTTCATTACAACTCTTTGTAGAACTAAGAGGGTAGAAGATGGTTATTTAATACATGGGGAACTCAACAGACTAAATAAAGTTGCTAGAAAGAGTACATACTTTAACTTGATACGTGGTTTTAACGAGTCAAGTAGGGGTGATATTGCTGCCAGACTTCTGATTGAAATGCAAGAAAGGGGTCACTCGCCGACTCGTAACCTGTTCAGAGATGTAATTTGCTGTCTATGTGCTACGGAAAATCCAGATAAGCAATTTTTTAATTTGTTAGAGCTGCAGTTGTGTTGTCGGGAACCTAGTTGTCAAATATACAACTTTTTCATCTATGGAGCTGGGCATGCGAAAAGGCCCGATCTGGCTAGACAAGTATATGAGACGATGCAGCGAAGTGGGATTGAGCCCAATCTGAGATCTGATGTTCTTATGTTGCAGAGTTATTTGAGGAGTGAACGAATTTCGGATGCTTTGAATTTCTTCAATGATCTGCACCAGAGAAGGGAAATGGGGAGAAGATTATACAGCACAATGATTGTTGGTCTCTGCAAGGTCAAAAGGGTGGATATTGCACTTGACTTCTTGAAGGAAATGAGAGAGAAGGGAGTGGTTCCAAGCGATGACTGTTATGAGTTTCTTATACAGTTGTCGTGCTGGAATCAAGGATATCATATAGCAGTAAATCTCATTAATGACTTGGAGAAAGTTGGCCGCCATATTACATCCTTTACTGGTAACATACTTCTGTTGCATTCTCTGAAAAGTCAAGAGCTCTACGACGCTTGGGTTCAACTGAGACAGGTGCCAAATGAGAAGTCTGATAGTTCAATGCTTGGTCTGCTTATTGGTGCATTTTCTGGTCGTGTCAGGTTGAGCCAAGATATTGAGAATTTGGAAGAAGTAATTGAAAAGTGCTTTCCGTTAGATGTGTACACATACAATTTGTTGCTGAGAAGCCTAAGCGAGACTAATATGGACCGTGCTTGTGCATTGTTCTATAAGATCTGCCAGAAAGGGTATGAGCCGAACCGGTGGACTTATGACACCTTAGTACAAGGTTTTCTTAAACATGGGAGGACTTCTGAGGCAAGGAGATGGTTAGAAGTGATGTACCGGAAAGGGTTTCATCCAACAGAGCGTACGAAGCTATTCATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

900

Amino Acids

103.06

Weight (kDa)

7.67

Isoelectric Point (pI)

39.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007971)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71210
fragaria_vesca	FvH4_3g29690 FvH4_3g29690 FvH4_3g29690 FvH4_3g29690 FvH4_3g29690 FvH4_3g29690
malus_domestica	MD05G1041400.v1.1 MD10G1047800.v1.1
prunus_persica	Prupe.8G057300_v2.0.a1 Prupe.8G057300_v2.0.a1
pyrus_communis	pycom05g03410 pycom10g03380 pycom17g22250
rosa_chinensis	RchiOBHm_Chr5g0055041
rosa_laevigata	RLG00000034959
rosa_multiflora	Rmu_sc0000925.1_g000011
rosa_roxburghii	Rroxscaffold_1G00025450
rosa_rugosa	Rorug05G0290400
rosa_samantha	Rh5AG360300 Rh5BG371300 Rh5CG393600 Rh5DG385100
rosa_wichuraiana	Rw5G033900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	186, 426
Acc16I	TGCGCA	1 cut(s)	582
AccB1I	GGYRCC	1 cut(s)	2344
AccBSI	CCGCTC	1 cut(s)	330
AccII	CGCG	5 cut(s)	227, 486, 488, 522, 600
AciI	CCGC	9 cut(s)	159, 217, 328, 336, 400, 414, 460, 484, 2254
AclWI	GGATC	3 cut(s)	163, 244, 1164
AcoI	YGGCCR	3 cut(s)	415, 457, 2251
AcsI	RAATTY	5 cut(s)	19, 1399, 2001, 2017, 2431
AcyI	GRCGYC	2 cut(s)	183, 423
AfaI	GTAC	8 cut(s)	563, 863, 1124, 1645, 2474, 2595, 2654, 2683
AfiI	CCNNNNNNNGG	5 cut(s)	33, 178, 900, 1219, 2044
AflIII	ACRYGT	1 cut(s)	225
AgeI	ACCGGT	1 cut(s)	2571
AhdI	GACNNNNNGTC	2 cut(s)	553, 1087
AjnI	CCWGG	1 cut(s)	687
AleI	CACNNNNGTG	1 cut(s)	608
AluBI	AGCT	7 cut(s)	93, 529, 1477, 1822, 1880, 2314, 2689
AluI	AGCT	7 cut(s)	93, 529, 1477, 1822, 1880, 2314, 2689
Alw21I	GWGCWC	2 cut(s)	399, 2316
Alw26I	GTCTC	6 cut(s)	261, 371, 1916, 2090, 2332, 2501
AlwI	GGATC	3 cut(s)	163, 244, 1164
Ama87I	CYCGRG	1 cut(s)	290
AoxI	GGCC	7 cut(s)	36, 127, 415, 457, 891, 1895, 2251
ApeKI	GCWGC	7 cut(s)	137, 411, 1235, 1368, 1697, 1822, 1930
ApoI	RAATTY	5 cut(s)	19, 1399, 2001, 2017, 2431
ArsI	GACNNNNNNTTYG	4 cut(s)	215, 247, 2342, 2374
AseI	ATTAAT	1 cut(s)	2232
AsiGI	ACCGGT	1 cut(s)	2571
Asp700I	GAANNNNTTC	2 cut(s)	2021, 2690
AspLEI	GCGC	7 cut(s)	349, 488, 524, 583, 672, 989, 1510
AspS9I	GGNCC	6 cut(s)	36, 98, 128, 891, 1896, 2518
AsuC2I	CCSGG	2 cut(s)	468, 1425
AsuHPI	GGTGA	5 cut(s)	99, 314, 622, 1216, 1700
AsuII	TTCGAA	1 cut(s)	1295
AvaI	CYCGRG	1 cut(s)	290
AvaII	GGWCC	2 cut(s)	98, 2518
BanI	GGYRCC	1 cut(s)	2344
BanII	GRGCYC	3 cut(s)	1314, 1950, 2316
BbsI	GAAGAC	1 cut(s)	52
Bbv12I	GWGCWC	2 cut(s)	399, 2316
BbvI	GCAGC	7 cut(s)	124, 423, 1222, 1380, 1684, 1809, 1942
BccI	CCATC	8 cut(s)	363, 607, 1052, 1180, 1193, 1358, 1583, 2631
BceAI	ACGGC	2 cut(s)	878, 893
BcgI	CGANNNNNNTGC	2 cut(s)	572, 606
BciT130I	CCWGG	1 cut(s)	689
BciVI	GTATCC	1 cut(s)	1020
BclI	TGATCA	1 cut(s)	1344
BcnI	CCSGG	2 cut(s)	468, 1425
BcoDI	GTCTC	6 cut(s)	261, 371, 1916, 2090, 2332, 2501
BfaI	CTAG	6 cut(s)	33, 132, 1511, 1635, 1845, 1908
BfmI	CTRYAG	1 cut(s)	1823
BfoI	RGCGCY	2 cut(s)	350, 990
BfuI	GTATCC	1 cut(s)	1020
BglI	GCCNNNNNGGC	2 cut(s)	344, 468
BglII	AGATCT	2 cut(s)	1958, 2544
BmcAI	AGTACT	1 cut(s)	863
Bme1390I	CCNGG	3 cut(s)	468, 689, 1425
Bme18I	GGWCC	2 cut(s)	98, 2518
BmeRI	GACNNNNNGTC	2 cut(s)	553, 1087
BmeT110I	CYCGRG	1 cut(s)	290
BmgT120I	GGNCC	6 cut(s)	36, 98, 128, 891, 1896, 2518
BmiI	GGNNCC	5 cut(s)	100, 1537, 1842, 2154, 2346
BmrFI	CCNGG	3 cut(s)	468, 689, 1425
BmrI	ACTGGG	1 cut(s)	460
BmsI	GCATC	7 cut(s)	531, 736, 841, 916, 1444, 1917, 1999
BmuI	ACTGGG	1 cut(s)	460
BoxI	GACNNNNGTC	1 cut(s)	383
BpiI	GAAGAC	1 cut(s)	52
Bpu10I	CCTNAGC	1 cut(s)	2501
Bpu14I	TTCGAA	1 cut(s)	1295
BpuEI	CTTGAG	5 cut(s)	239, 422, 803, 1184, 1301
BpuMI	CCSGG	2 cut(s)	468, 1425
BsaAI	YACGTR	3 cut(s)	561, 1031, 1664
BsaHI	GRCGYC	2 cut(s)	183, 423
BsaI	GGTCTC	2 cut(s)	371, 2090
BsaJI	CCNNGG	1 cut(s)	177
BsaWI	WCCGGW	4 cut(s)	95, 263, 2571, 2655
BsaXI	ACNNNNNCTCC	6 cut(s)	314, 317, 344, 347, 413, 443
Bsc4I	CCNNNNNNNGG	5 cut(s)	33, 178, 900, 1219, 2044
Bse118I	RCCGGY	1 cut(s)	2571
Bse1I	ACTGG	2 cut(s)	455, 2278
Bse3DI	GCAATG	2 cut(s)	642, 759
BseBI	CCWGG	1 cut(s)	689
BseDI	CCNNGG	1 cut(s)	177
BseGI	GGATG	8 cut(s)	697, 853, 1204, 1369, 1381, 2014, 2264, 2668
BseLI	CCNNNNNNNGG	5 cut(s)	33, 178, 900, 1219, 2044
BseMI	GCAATG	2 cut(s)	642, 759
BseMII	CTCAG	7 cut(s)	5, 366, 1293, 1946, 2327, 2483, 2616
BseNI	ACTGG	2 cut(s)	455, 2278
BseRI	GAGGAG	4 cut(s)	322, 989, 1181, 2005
BseX3I	CGGCCG	1 cut(s)	457
BseXI	GCAGC	7 cut(s)	124, 423, 1222, 1380, 1684, 1809, 1942
BseYI	CCCAGC	4 cut(s)	959, 989, 1046, 1880
BsgI	GTGCAG	2 cut(s)	1483, 2018
Bsh1236I	CGCG	5 cut(s)	227, 486, 488, 522, 600
Bsh1285I	CGRYCG	1 cut(s)	460
BshFI	GGCC	7 cut(s)	38, 129, 417, 459, 893, 1897, 2253
BshNI	GGYRCC	1 cut(s)	2344
BshTI	ACCGGT	1 cut(s)	2571
BsiEI	CGRYCG	1 cut(s)	460
BsiHKAI	GWGCWC	2 cut(s)	399, 2316
BsiHKCI	CYCGRG	1 cut(s)	290
BsiSI	CCGG	6 cut(s)	96, 264, 468, 1424, 2572, 2656
BsiWI	CGTACG	1 cut(s)	2681
BslFI	GGGAC	1 cut(s)	84
BslI	CCNNNNNNNGG	5 cut(s)	33, 178, 900, 1219, 2044
BsmAI	GTCTC	6 cut(s)	261, 371, 1916, 2090, 2332, 2501
BsmBI	CGTCTC	2 cut(s)	261, 1916
BsmFI	GGGAC	1 cut(s)	84
BsmI	GAATGC	3 cut(s)	724, 1237, 2293
BsnI	GGCC	7 cut(s)	38, 129, 417, 459, 893, 1897, 2253
Bso31I	GGTCTC	2 cut(s)	371, 2090
BsoBI	CYCGRG	1 cut(s)	290
Bsp119I	TTCGAA	1 cut(s)	1295
Bsp1286I	GDGCHC	4 cut(s)	399, 1314, 1950, 2316
Bsp1407I	TGTACA	1 cut(s)	2472
Bsp68I	TCGCGA	1 cut(s)	600
BspACI	CCGC	9 cut(s)	159, 217, 328, 336, 400, 414, 460, 484, 2254
BspANI	GGCC	7 cut(s)	38, 129, 417, 459, 893, 1897, 2253
BspCNI	CTCAG	7 cut(s)	6, 367, 1294, 1947, 2328, 2484, 2617
BspFNI	CGCG	5 cut(s)	227, 486, 488, 522, 600
BspLI	GGNNCC	5 cut(s)	100, 1537, 1842, 2154, 2346
BspMAI	CTGCAG	1 cut(s)	1827
BspPI	GGATC	3 cut(s)	163, 244, 1164
BspT104I	TTCGAA	1 cut(s)	1295
BspT107I	GGYRCC	1 cut(s)	2344
BspTNI	GGTCTC	2 cut(s)	371, 2090
BsrBI	CCGCTC	1 cut(s)	330
BsrDI	GCAATG	2 cut(s)	642, 759
BsrFI	RCCGGY	1 cut(s)	2571
BsrGI	TGTACA	1 cut(s)	2472
BsrI	ACTGG	2 cut(s)	455, 2278
BssAI	RCCGGY	1 cut(s)	2571
BssECI	CCNNGG	1 cut(s)	177
BssNI	GRCGYC	2 cut(s)	183, 423
BssT1I	CCWWGG	1 cut(s)	177
Bst2UI	CCWGG	1 cut(s)	689
Bst4CI	ACNGT	5 cut(s)	280, 657, 2168, 2187, 2522
Bst6I	CTCTTC	1 cut(s)	726
BstACI	GRCGYC	2 cut(s)	183, 423
BstAPI	GCANNNNNTGC	1 cut(s)	841
BstAUI	TGTACA	1 cut(s)	2472
BstBAI	YACGTR	3 cut(s)	561, 1031, 1664
BstBI	TTCGAA	1 cut(s)	1295
BstC8I	GCNNGC	9 cut(s)	40, 163, 351, 464, 569, 631, 906, 957, 1887
BstEII	GGTNACC	1 cut(s)	1222
BstF5I	GGATG	8 cut(s)	697, 853, 1204, 1369, 1381, 2014, 2264, 2668
BstFNI	CGCG	5 cut(s)	227, 486, 488, 522, 600
BstH2I	RGCGCY	2 cut(s)	350, 990
BstHHI	GCGC	7 cut(s)	349, 488, 524, 583, 672, 989, 1510
BstMAI	GTCTC	6 cut(s)	261, 371, 1916, 2090, 2332, 2501
BstMCI	CGRYCG	1 cut(s)	460
BstMWI	GCNNNNNNNGC	8 cut(s)	344, 408, 468, 841, 1251, 1886, 2380, 2686
BstNI	CCWGG	1 cut(s)	689
BstNSI	RCATGY	2 cut(s)	908, 1889
BstPAI	GACNNNNGTC	1 cut(s)	383
BstPI	GGTNACC	1 cut(s)	1222
BstSCI	CCNGG	3 cut(s)	466, 687, 1423
BstSFI	CTRYAG	1 cut(s)	1823
BstUI	CGCG	5 cut(s)	227, 486, 488, 522, 600
BstV1I	GCAGC	7 cut(s)	124, 423, 1222, 1380, 1684, 1809, 1942
BstV2I	GAAGAC	1 cut(s)	52
BstX2I	RGATCY	3 cut(s)	249, 1958, 2544
BstXI	CCANNNNNNTGG	1 cut(s)	659
BstYI	RGATCY	3 cut(s)	249, 1958, 2544
BstZI	CGGCCG	1 cut(s)	457
BsuI	GTATCC	1 cut(s)	1020
BsuRI	GGCC	7 cut(s)	38, 129, 417, 459, 893, 1897, 2253
BtgZI	GCGATG	1 cut(s)	2175
BtsCI	GGATG	8 cut(s)	697, 853, 1204, 1369, 1381, 2014, 2264, 2668
BtsIMutI	CAGTG	1 cut(s)	536
BtuMI	TCGCGA	1 cut(s)	600
Cac8I	GCNNGC	9 cut(s)	40, 163, 351, 464, 569, 631, 906, 957, 1887
CfoI	GCGC	7 cut(s)	349, 488, 524, 583, 672, 989, 1510
Cfr10I	RCCGGY	1 cut(s)	2571
Cfr13I	GGNCC	6 cut(s)	36, 98, 128, 891, 1896, 2518
CseI	GACGC	2 cut(s)	233, 2330
Csp6I	GTAC	8 cut(s)	562, 862, 1123, 1644, 2473, 2594, 2653, 2682
CspAI	ACCGGT	1 cut(s)	2571
CviQI	GTAC	8 cut(s)	562, 862, 1123, 1644, 2473, 2594, 2653, 2682
DriI	GACNNNNNGTC	2 cut(s)	553, 1087
EaeI	YGGCCR	3 cut(s)	415, 457, 2251
EagI	CGGCCG	1 cut(s)	457
Eam1104I	CTCTTC	1 cut(s)	726
Eam1105I	GACNNNNNGTC	2 cut(s)	553, 1087
EarI	CTCTTC	1 cut(s)	726
EciI	GGCGGA	1 cut(s)	325
Ecl136II	GAGCTC	1 cut(s)	2314
EclXI	CGGCCG	1 cut(s)	457
Eco130I	CCWWGG	1 cut(s)	177
Eco24I	GRGCYC	3 cut(s)	1314, 1950, 2316
Eco31I	GGTCTC	2 cut(s)	371, 2090
Eco32I	GATATC	1 cut(s)	2210
Eco47I	GGWCC	2 cut(s)	98, 2518
Eco52I	CGGCCG	1 cut(s)	457
Eco53kI	GAGCTC	1 cut(s)	2314
Eco88I	CYCGRG	1 cut(s)	290
Eco91I	GGTNACC	1 cut(s)	1222
EcoICRI	GAGCTC	1 cut(s)	2314
EcoO65I	GGTNACC	1 cut(s)	1222
EcoRI	GAATTC	1 cut(s)	1399
EcoRII	CCWGG	1 cut(s)	687
EcoRV	GATATC	1 cut(s)	2210
EcoT14I	CCWWGG	1 cut(s)	177
EcoT38I	GRGCYC	3 cut(s)	1314, 1950, 2316
ErhI	CCWWGG	1 cut(s)	177
Esp3I	CGTCTC	2 cut(s)	261, 1916
FalI	AAGNNNNNCTT	4 cut(s)	824, 856, 2589, 2621
FaqI	GGGAC	1 cut(s)	84
FauI	CCCGC	1 cut(s)	491
FauNDI	CATATG	1 cut(s)	1384
FbaI	TGATCA	1 cut(s)	1344
FokI	GGATG	8 cut(s)	704, 860, 1211, 1376, 1388, 2021, 2251, 2655
FriOI	GRGCYC	3 cut(s)	1314, 1950, 2316
FspAI	RTGCGCAY	1 cut(s)	582
FspBI	CTAG	6 cut(s)	33, 132, 1511, 1635, 1845, 1908
FspI	TGCGCA	1 cut(s)	582
GlaI	GCGC	7 cut(s)	348, 487, 523, 582, 671, 988, 1509
GsaI	CCCAGC	4 cut(s)	963, 993, 1050, 1884
HaeII	RGCGCY	2 cut(s)	350, 990
HaeIII	GGCC	7 cut(s)	38, 129, 417, 459, 893, 1897, 2253
HapII	CCGG	6 cut(s)	96, 264, 468, 1424, 2572, 2656
HgaI	GACGC	2 cut(s)	233, 2330
HhaI	GCGC	7 cut(s)	349, 488, 524, 583, 672, 989, 1510
Hin1I	GRCGYC	2 cut(s)	183, 423
Hin6I	GCGC	7 cut(s)	347, 486, 522, 581, 670, 987, 1508
HinP1I	GCGC	7 cut(s)	347, 486, 522, 581, 670, 987, 1508
HinfI	GANTC	4 cut(s)	511, 1676, 1741, 2200
HpaII	CCGG	6 cut(s)	96, 264, 468, 1424, 2572, 2656
HphI	GGTGA	5 cut(s)	99, 314, 622, 1216, 1700
Hpy166II	GTNNAC	5 cut(s)	558, 1997, 2473, 2475, 2577
Hpy8I	GTNNAC	5 cut(s)	558, 1997, 2473, 2475, 2577
Hpy99I	CGWCG	4 cut(s)	188, 227, 425, 2324
HpyAV	CCTTC	9 cut(s)	120, 391, 502, 1091, 1189, 1483, 2037, 2122, 2137
HpyCH4III	ACNGT	5 cut(s)	280, 657, 2168, 2187, 2522
HpyCH4IV	ACGT	5 cut(s)	183, 423, 560, 1030, 1663
HpyF10VI	GCNNNNNNNGC	8 cut(s)	344, 408, 468, 841, 1251, 1886, 2380, 2686
HpySE526I	ACGT	5 cut(s)	183, 423, 560, 1030, 1663
Hsp92I	GRCGYC	2 cut(s)	183, 423
HspAI	GCGC	7 cut(s)	347, 486, 522, 581, 670, 987, 1508
Ksp22I	TGATCA	1 cut(s)	1344
LmnI	GCTCC	4 cut(s)	98, 335, 402, 1877
Lsp1109I	GCAGC	7 cut(s)	124, 423, 1222, 1380, 1684, 1809, 1942
LweI	GCATC	7 cut(s)	531, 736, 841, 916, 1444, 1917, 1999
MaeI	CTAG	6 cut(s)	33, 132, 1511, 1635, 1845, 1908
MaeII	ACGT	5 cut(s)	183, 423, 560, 1030, 1663
MaeIII	GTNAC	5 cut(s)	534, 1222, 1730, 1745, 2276
MbiI	CCGCTC	1 cut(s)	330
MflI	RGATCY	3 cut(s)	249, 1958, 2544
MhlI	GDGCHC	4 cut(s)	399, 1314, 1950, 2316
MluI	ACGCGT	1 cut(s)	225
MlyI	GAGTC	2 cut(s)	1685, 1735
MmeI	TCCRAC	4 cut(s)	324, 676, 1047, 2696
MroXI	GAANNNNTTC	2 cut(s)	2021, 2690
MseI	TTAA	7 cut(s)	474, 1598, 1653, 1671, 1809, 2232, 2607
MslI	CAYNNNNRTG	1 cut(s)	608
MspA1I	CMGCKG	1 cut(s)	414
MspI	CCGG	6 cut(s)	96, 264, 468, 1424, 2572, 2656
MspR9I	CCNGG	3 cut(s)	468, 689, 1425
Mva1269I	GAATGC	3 cut(s)	724, 1237, 2293
MvaI	CCWGG	1 cut(s)	689
MvnI	CGCG	5 cut(s)	227, 486, 488, 522, 600
MwoI	GCNNNNNNNGC	8 cut(s)	344, 408, 468, 841, 1251, 1886, 2380, 2686
NciI	CCSGG	2 cut(s)	468, 1425
NdeI	CATATG	1 cut(s)	1384
NlaIV	GGNNCC	5 cut(s)	100, 1537, 1842, 2154, 2346
NmuCI	GTSAC	3 cut(s)	534, 1222, 1730
NruI	TCGCGA	1 cut(s)	600
NsbI	TGCGCA	1 cut(s)	582
NspI	RCATGY	2 cut(s)	908, 1889
NspV	TTCGAA	1 cut(s)	1295
OliI	CACNNNNGTG	1 cut(s)	608
PaeI	GCATGC	2 cut(s)	908, 1889
PaeR7I	CTCGAG	1 cut(s)	290
PcsI	WCGNNNNNNNCGW	3 cut(s)	231, 276, 891
PctI	GAATGC	3 cut(s)	724, 1237, 2293
PdmI	GAANNNNTTC	2 cut(s)	2021, 2690
PfeI	GAWTC	2 cut(s)	511, 2200
Pfl23II	CGTACG	1 cut(s)	2681
PflFI	GACNNNGTC	2 cut(s)	185, 452
PinAI	ACCGGT	1 cut(s)	2571
PleI	GAGTC	2 cut(s)	1684, 1735
PpsI	GAGTC	2 cut(s)	1684, 1735
Ppu21I	YACGTR	3 cut(s)	561, 1031, 1664
PshAI	GACNNNNGTC	1 cut(s)	383
PshBI	ATTAAT	1 cut(s)	2232
Psp124BI	GAGCTC	1 cut(s)	2316
Psp6I	CCWGG	1 cut(s)	687
PspEI	GGTNACC	1 cut(s)	1222
PspFI	CCCAGC	4 cut(s)	959, 989, 1046, 1880
PspGI	CCWGG	1 cut(s)	687
PspLI	CGTACG	1 cut(s)	2681
PspN4I	GGNNCC	5 cut(s)	100, 1537, 1842, 2154, 2346
PspPI	GGNCC	6 cut(s)	36, 98, 128, 891, 1896, 2518
PstI	CTGCAG	1 cut(s)	1827
PsuI	RGATCY	3 cut(s)	249, 1958, 2544
PsyI	GACNNNGTC	2 cut(s)	185, 452
RruI	TCGCGA	1 cut(s)	600
RsaI	GTAC	8 cut(s)	563, 863, 1124, 1645, 2474, 2595, 2654, 2683
RsaNI	GTAC	8 cut(s)	562, 862, 1123, 1644, 2473, 2594, 2653, 2682
RseI	CAYNNNNRTG	1 cut(s)	608
SacI	GAGCTC	1 cut(s)	2316
SaqAI	TTAA	7 cut(s)	474, 1598, 1653, 1671, 1809, 2232, 2607
Sau96I	GGNCC	6 cut(s)	36, 98, 128, 891, 1896, 2518
ScaI	AGTACT	1 cut(s)	863
SchI	GAGTC	2 cut(s)	1685, 1735
ScrFI	CCNGG	3 cut(s)	468, 689, 1425
SduI	GDGCHC	4 cut(s)	399, 1314, 1950, 2316
SfaNI	GCATC	7 cut(s)	531, 736, 841, 916, 1444, 1917, 1999
SfcI	CTRYAG	1 cut(s)	1823
Sfr274I	CTCGAG	1 cut(s)	290
SfuI	TTCGAA	1 cut(s)	1295
SinI	GGWCC	2 cut(s)	98, 2518
SlaI	CTCGAG	1 cut(s)	290
SmiMI	CAYNNNNRTG	1 cut(s)	608
SmlI	CTYRAG	6 cut(s)	254, 290, 437, 818, 1163, 1280
SmoI	CTYRAG	6 cut(s)	254, 290, 437, 818, 1163, 1280
SphI	GCATGC	2 cut(s)	908, 1889
SsiI	CCGC	9 cut(s)	159, 217, 328, 336, 400, 414, 460, 484, 2254
SspMI	CTAG	6 cut(s)	33, 132, 1511, 1635, 1845, 1908
SstI	GAGCTC	1 cut(s)	2316
StyD4I	CCNGG	3 cut(s)	466, 687, 1423
StyI	CCWWGG	1 cut(s)	177
TaaI	ACNGT	5 cut(s)	280, 657, 2168, 2187, 2522
TaiI	ACGT	5 cut(s)	186, 426, 563, 1033, 1666
TaqI	TCGA	8 cut(s)	234, 285, 291, 447, 592, 951, 1295, 1479
TatI	WGTACW	4 cut(s)	861, 1643, 2472, 2593
TauI	GCSGC	4 cut(s)	219, 417, 462, 2256
TfiI	GAWTC	2 cut(s)	511, 2200
Tru1I	TTAA	7 cut(s)	474, 1598, 1653, 1671, 1809, 2232, 2607
Tru9I	TTAA	7 cut(s)	474, 1598, 1653, 1671, 1809, 2232, 2607
TscAI	CASTG	1 cut(s)	543
TseFI	GTSAC	3 cut(s)	534, 1222, 1730
TseI	GCWGC	7 cut(s)	137, 411, 1235, 1368, 1697, 1822, 1930
Tsp45I	GTSAC	3 cut(s)	534, 1222, 1730
TspGWI	ACGGA	3 cut(s)	799, 1799, 2451
TspRI	CASTG	1 cut(s)	543
Tth111I	GACNNNGTC	2 cut(s)	185, 452
VpaK11BI	GGWCC	2 cut(s)	98, 2518
VspI	ATTAAT	1 cut(s)	2232
XapI	RAATTY	5 cut(s)	19, 1399, 2001, 2017, 2431
XceI	RCATGY	2 cut(s)	908, 1889
XhoI	CTCGAG	1 cut(s)	290
XmnI	GAANNNNTTC	2 cut(s)	2021, 2690
XspI	CTAG	6 cut(s)	33, 132, 1511, 1635, 1845, 1908
ZraI	GACGTC	2 cut(s)	184, 424
ZrmI	AGTACT	1 cut(s)	863

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.