Prupe.8G088700_v2.0.a1

Belongs to the peptidase C1 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
12195980 .. 12198790
2811 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G088700.1

Sequence Viewer

Length: 1104 bp
ATGGATCGCTATCTCTCTCTTCTTCTCGCATTCTCTCTCTTGATCGTCTCGCGTGCGCAATCGGACGGGGCAGATCCGCTGATCAGGCAAGTGGTCGACGGCGGCGATGATCACCAGCACGACCATCGGCTCGGAGCCGAACACCACTTCTCGCTCTTCAAGCACCAATTCGGCAAGTCGTACGCGAGCCAGGAGGAGCACGACTACAGGTTCGAAGTGTTCAAGGCGAACCTGCGCCGAGCCGCGCGACACCAGATGCTCGATCCTTCGGCTCAACACGGCGTGACTCGGTTCTCCGATATGACCCCGGCCGAGTTCCGAAAGAGTCAACTCGGACTCAGAGGGCTGAGGCTCCCTTCCGATGCCACCAAGGCTCCGATTCTCCCGACCGAGAATCTGCCTGAGGATTTTGATTGGAGGGATCGTGGAGCTGTCACCGCCGTTAAAAATCAGGGCTCGTGCGGGTCGTGCTGGAGTTTCAGTACTACAGGAGCTTTGGAAGGTGCCCATTTTCTGGCGACTGGAGAGCTTGTGAGCCTCAGTGAGCAGCAGCTTGTGGATTGTGATCACGAGTGTGATCCAGAGGAGGCAGGTTCATGCGACTCTGGATGCAATGGCGGGCTCATGAACAGTGCCTTTGAGTACACACTCAAAGCTGGTGGACTAATGAAGGAAGAAGAATATCCATACACTGGTACTGATCGCGGAAGCTGCAAATTTGACAAAAGCAAAATTGCAGCAAAGGTTGCCAATTTCAGTGTTGTCTCCCTTGATGAAGAACAAATTGCTGCAAACCTTGTGAAAAATGGCCCTCTTGCAGTGGCTATCAACGCAGTGTTCATGCAAACATATGTTGGTGGAGTGTCATGCCCCTACATTTGCTCAAAGAGATTGGATCATGGGGTGCTGCTCGTGGGTTATGGTGCAGCTGGCTATTCTCCCATCAGAATGAAAGAGAAGCCATACTGGATCATAAAGAACTCATGGGGAGAGAACTGGGGAGAGAAGGGATTTTACAAAATCTGCAAGGGCCGTAATATCTGCGGTGTAGACTCCATGGTCTCAACTGTTGCTGCAGCATCTGTTGAGACCAACCCACAGTAG

Protein Analysis

368

Amino Acids

40.27

Weight (kDa)

5.86

Isoelectric Point (pI)

29.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1058
Acc16I TGCGCA 1 cut(s) 57
Acc36I ACCTGC 2 cut(s) 240, 581
AccB1I GGYRCC 1 cut(s) 503
AccB7I CCANNNNNTGG 2 cut(s) 514, 692
AccI GTMKAC 2 cut(s) 96, 1050
AccII CGCG 5 cut(s) 52, 185, 245, 247, 705
AciI CCGC 8 cut(s) 77, 102, 243, 438, 462, 618, 705, 1044
AclWI GGATC 7 cut(s) 12, 68, 257, 429, 572, 903, 977
AcoI YGGCCR 1 cut(s) 309
AcsI RAATTY 1 cut(s) 716
AdeI CACNNNGTG 1 cut(s) 283
AfaI GTAC 4 cut(s) 182, 484, 644, 697
AfiI CCNNNNNNNGG 2 cut(s) 514, 692
AgsI TTSAA 2 cut(s) 160, 223
AjnI CCWGG 1 cut(s) 189
AleI CACNNNNGTG 1 cut(s) 573
AluBI AGCT 7 cut(s) 431, 494, 529, 553, 656, 711, 929
AluI AGCT 7 cut(s) 431, 494, 529, 553, 656, 711, 929
Alw21I GWGCWC 1 cut(s) 201
Alw26I GTCTC 4 cut(s) 52, 769, 1066, 1082
AlwI GGATC 7 cut(s) 12, 68, 257, 429, 572, 903, 977
AlwNI CAGNNNCTG 1 cut(s) 1082
AoxI GGCC 3 cut(s) 309, 808, 1030
ApeKI GCWGC 9 cut(s) 547, 550, 711, 737, 788, 907, 926, 1073, 1076
ApoI RAATTY 1 cut(s) 716
ArsI GACNNNNNNTTYG 2 cut(s) 194, 226
AspLEI GCGC 3 cut(s) 58, 237, 247
AspS9I GGNCC 2 cut(s) 809, 1030
AsuC2I CCSGG 1 cut(s) 308
AsuHPI GGTGA 2 cut(s) 104, 427
AsuII TTCGAA 1 cut(s) 213
AxyI CCTNAGG 1 cut(s) 402
BaeGI GKGCMC 1 cut(s) 508
BanI GGYRCC 1 cut(s) 503
BanII GRGCYC 2 cut(s) 458, 624
BarI GAAGNNNNNNTAC 2 cut(s) 998, 1030
BauI CACGAG 3 cut(s) 457, 569, 911
Bbv12I GWGCWC 1 cut(s) 201
BbvCI CCTCAGC 1 cut(s) 347
BbvI GCAGC 9 cut(s) 559, 562, 698, 749, 775, 894, 938, 1060, 1088
BccI CCATC 2 cut(s) 132, 950
BceAI ACGGC 4 cut(s) 115, 295, 425, 1017
BcgI CGANNNNNNTGC 2 cut(s) 107, 141
BciT130I CCWGG 1 cut(s) 191
BclI TGATCA 3 cut(s) 81, 109, 565
BcnI CCSGG 1 cut(s) 308
BcoDI GTCTC 4 cut(s) 52, 769, 1066, 1082
BfmI CTRYAG 3 cut(s) 205, 486, 1074
BfuAI ACCTGC 2 cut(s) 240, 581
BglI GCCNNNNNGGC 1 cut(s) 371
BmcAI AGTACT 1 cut(s) 484
Bme1390I CCNGG 2 cut(s) 191, 308
BmgT120I GGNCC 2 cut(s) 809, 1030
BmiI GGNNCC 4 cut(s) 136, 353, 375, 505
BmrFI CCNGG 2 cut(s) 191, 308
BmrI ACTGGG 1 cut(s) 1006
BmsI GCATC 4 cut(s) 246, 352, 599, 1088
BmuI ACTGGG 1 cut(s) 1006
BpmI CTGGAG 2 cut(s) 493, 543
Bpu10I CCTNAGC 1 cut(s) 347
Bpu14I TTCGAA 1 cut(s) 213
BpuMI CCSGG 1 cut(s) 308
BsaBI GATNNNNATC 2 cut(s) 9, 564
BsaI GGTCTC 2 cut(s) 1066, 1082
BsaJI CCNNGG 3 cut(s) 306, 369, 1056
BsaXI ACNNNNNCTCC 8 cut(s) 358, 388, 409, 439, 466, 496, 516, 546
Bsc4I CCNNNNNNNGG 2 cut(s) 514, 692
Bse1I ACTGG 4 cut(s) 526, 697, 971, 1001
Bse21I CCTNAGG 1 cut(s) 402
Bse3DI GCAATG 1 cut(s) 619
Bse8I GATNNNNATC 2 cut(s) 9, 564
BseBI CCWGG 1 cut(s) 191
BseDI CCNNGG 3 cut(s) 306, 369, 1056
BseGI GGATG 1 cut(s) 614
BseJI GATNNNNATC 2 cut(s) 9, 564
BseLI CCNNNNNNNGG 2 cut(s) 514, 692
BseMI GCAATG 1 cut(s) 619
BseMII CTCAG 4 cut(s) 338, 352, 393, 553
BseNI ACTGG 4 cut(s) 526, 697, 971, 1001
BseRI GAGGAG 2 cut(s) 209, 599
BseSI GKGCMC 1 cut(s) 508
BseX3I CGGCCG 1 cut(s) 309
BseXI GCAGC 9 cut(s) 559, 562, 698, 749, 775, 894, 938, 1060, 1088
BsgI GTGCAG 1 cut(s) 945
Bsh1236I CGCG 5 cut(s) 52, 185, 245, 247, 705
Bsh1285I CGRYCG 2 cut(s) 312, 390
BshFI GGCC 3 cut(s) 311, 810, 1032
BshNI GGYRCC 1 cut(s) 503
BsiEI CGRYCG 2 cut(s) 312, 390
BsiHKAI GWGCWC 1 cut(s) 201
BsiSI CCGG 1 cut(s) 308
BsiWI CGTACG 1 cut(s) 180
BslI CCNNNNNNNGG 2 cut(s) 514, 692
BsmAI GTCTC 4 cut(s) 52, 769, 1066, 1082
BsmBI CGTCTC 1 cut(s) 52
BsmI GAATGC 1 cut(s) 29
BsnI GGCC 3 cut(s) 311, 810, 1032
Bso31I GGTCTC 2 cut(s) 1066, 1082
Bsp119I TTCGAA 1 cut(s) 213
Bsp1286I GDGCHC 4 cut(s) 201, 458, 508, 624
Bsp19I CCATGG 1 cut(s) 1056
BspACI CCGC 8 cut(s) 77, 102, 243, 438, 462, 618, 705, 1044
BspANI GGCC 3 cut(s) 311, 810, 1032
BspCNI CTCAG 4 cut(s) 339, 351, 394, 552
BspFNI CGCG 5 cut(s) 52, 185, 245, 247, 705
BspHI TCATGA 1 cut(s) 624
BspLI GGNNCC 4 cut(s) 136, 353, 375, 505
BspMAI CTGCAG 1 cut(s) 1078
BspMI ACCTGC 2 cut(s) 240, 581
BspPI GGATC 7 cut(s) 12, 68, 257, 429, 572, 903, 977
BspQI GCTCTTC 1 cut(s) 161
BspT104I TTCGAA 1 cut(s) 213
BspT107I GGYRCC 1 cut(s) 503
BspTNI GGTCTC 2 cut(s) 1066, 1082
BsrDI GCAATG 1 cut(s) 619
BsrI ACTGG 4 cut(s) 526, 697, 971, 1001
BssECI CCNNGG 3 cut(s) 306, 369, 1056
BssSI CACGAG 3 cut(s) 457, 569, 911
BssT1I CCWWGG 2 cut(s) 369, 1056
Bst2BI CACGAG 3 cut(s) 457, 569, 911
Bst2UI CCWGG 1 cut(s) 191
Bst4CI ACNGT 3 cut(s) 632, 1069, 1101
Bst6I CTCTTC 2 cut(s) 24, 161
BstAPI GCANNNNNTGC 1 cut(s) 746
BstBI TTCGAA 1 cut(s) 213
BstC8I GCNNGC 4 cut(s) 54, 187, 620, 931
BstDEI CTNAG 4 cut(s) 338, 347, 402, 539
BstDSI CCRYGG 1 cut(s) 1056
BstF5I GGATG 1 cut(s) 614
BstFNI CGCG 5 cut(s) 52, 185, 245, 247, 705
BstHHI GCGC 3 cut(s) 58, 237, 247
BstMAI GTCTC 4 cut(s) 52, 769, 1066, 1082
BstMCI CGRYCG 2 cut(s) 312, 390
BstMWI GCNNNNNNNGC 8 cut(s) 85, 160, 371, 437, 468, 711, 746, 830
BstNI CCWGG 1 cut(s) 191
BstSCI CCNGG 2 cut(s) 189, 306
BstSFI CTRYAG 3 cut(s) 205, 486, 1074
BstSLI GKGCMC 1 cut(s) 508
BstUI CGCG 5 cut(s) 52, 185, 245, 247, 705
BstV1I GCAGC 9 cut(s) 559, 562, 698, 749, 775, 894, 938, 1060, 1088
BstX2I RGATCY 1 cut(s) 73
BstYI RGATCY 1 cut(s) 73
BstZI CGGCCG 1 cut(s) 309
Bsu36I CCTNAGG 1 cut(s) 402
BsuRI GGCC 3 cut(s) 311, 810, 1032
BtgI CCRYGG 1 cut(s) 1056
BtgZI GCGATG 1 cut(s) 120
BtsCI GGATG 1 cut(s) 614
BtsI GCAGTG 2 cut(s) 825, 840
BtsIMutI CAGTG 6 cut(s) 547, 637, 690, 763, 825, 840
BveI ACCTGC 2 cut(s) 240, 581
Cac8I GCNNGC 4 cut(s) 54, 187, 620, 931
CaiI CAGNNNCTG 1 cut(s) 1082
CciI TCATGA 1 cut(s) 624
CfoI GCGC 3 cut(s) 58, 237, 247
Cfr13I GGNCC 2 cut(s) 809, 1030
Csp6I GTAC 4 cut(s) 181, 483, 643, 696
CspCI CAANNNNNGTGG 2 cut(s) 640, 675
CviAII CATG 7 cut(s) 597, 625, 841, 867, 899, 984, 1057
CviQI GTAC 4 cut(s) 181, 483, 643, 696
DdeI CTNAG 4 cut(s) 338, 347, 402, 539
DraIII CACNNNGTG 1 cut(s) 283
DrdI GACNNNNNNGTC 1 cut(s) 1058
DseDI GACNNNNNNGTC 1 cut(s) 1058
EaeI YGGCCR 1 cut(s) 309
EagI CGGCCG 1 cut(s) 309
Eam1104I CTCTTC 2 cut(s) 24, 161
EarI CTCTTC 2 cut(s) 24, 161
EclXI CGGCCG 1 cut(s) 309
Eco130I CCWWGG 2 cut(s) 369, 1056
Eco24I GRGCYC 2 cut(s) 458, 624
Eco31I GGTCTC 2 cut(s) 1066, 1082
Eco52I CGGCCG 1 cut(s) 309
Eco81I CCTNAGG 1 cut(s) 402
EcoRII CCWGG 1 cut(s) 189
EcoT14I CCWWGG 2 cut(s) 369, 1056
EcoT38I GRGCYC 2 cut(s) 458, 624
ErhI CCWWGG 2 cut(s) 369, 1056
Esp3I CGTCTC 1 cut(s) 52
FaeI CATG 7 cut(s) 600, 628, 844, 870, 902, 987, 1060
FatI CATG 7 cut(s) 596, 624, 840, 866, 898, 983, 1056
FauI CCCGC 2 cut(s) 455, 611
FauNDI CATATG 1 cut(s) 850
FbaI TGATCA 3 cut(s) 81, 109, 565
FblI GTMKAC 2 cut(s) 96, 1050
FokI GGATG 1 cut(s) 621
FriOI GRGCYC 2 cut(s) 458, 624
FspI TGCGCA 1 cut(s) 57
GlaI GCGC 3 cut(s) 57, 236, 246
GsuI CTGGAG 2 cut(s) 493, 543
HaeIII GGCC 3 cut(s) 311, 810, 1032
HapII CCGG 1 cut(s) 308
HhaI GCGC 3 cut(s) 58, 237, 247
Hin1II CATG 7 cut(s) 600, 628, 844, 870, 902, 987, 1060
Hin6I GCGC 3 cut(s) 56, 235, 245
HinP1I GCGC 3 cut(s) 56, 235, 245
HincII GTYRAC 2 cut(s) 97, 329
HindII GTYRAC 2 cut(s) 97, 329
HinfI GANTC 7 cut(s) 286, 325, 336, 379, 394, 602, 1052
HpaII CCGG 1 cut(s) 308
HphI GGTGA 2 cut(s) 104, 427
Hpy166II GTNNAC 5 cut(s) 97, 329, 645, 662, 1051
Hpy188I TCNGA 9 cut(s) 64, 134, 298, 320, 335, 341, 361, 378, 947
Hpy188III TCNNGA 6 cut(s) 40, 385, 569, 581, 606, 625
Hpy8I GTNNAC 5 cut(s) 97, 329, 645, 662, 1051
Hpy99I CGWCG 1 cut(s) 101
HpyAV CCTTC 5 cut(s) 276, 366, 494, 664, 1000
HpyCH4III ACNGT 3 cut(s) 632, 1069, 1101
HpyCH4V TGCA 9 cut(s) 612, 714, 737, 791, 818, 844, 926, 1026, 1076
HpyF10VI GCNNNNNNNGC 8 cut(s) 85, 160, 371, 437, 468, 711, 746, 830
HpyF3I CTNAG 4 cut(s) 338, 347, 402, 539
Hsp92II CATG 7 cut(s) 600, 628, 844, 870, 902, 987, 1060
HspAI GCGC 3 cut(s) 56, 235, 245
Ksp22I TGATCA 3 cut(s) 81, 109, 565
LguI GCTCTTC 1 cut(s) 161
LmnI GCTCC 6 cut(s) 134, 196, 357, 379, 428, 491
Lsp1109I GCAGC 9 cut(s) 559, 562, 698, 749, 775, 894, 938, 1060, 1088
LweI GCATC 4 cut(s) 246, 352, 599, 1088
MaeIII GTNAC 2 cut(s) 283, 433
MboII GAAGA 6 cut(s) 11, 14, 148, 686, 689, 788
MflI RGATCY 1 cut(s) 73
MhlI GDGCHC 4 cut(s) 201, 458, 508, 624
MluCI AATT 5 cut(s) 167, 716, 732, 751, 783
MlyI GAGTC 5 cut(s) 280, 330, 334, 596, 1046
MnlI CCTC 9 cut(s) 187, 335, 342, 397, 411, 548, 577, 580, 822
MseI TTAA 1 cut(s) 444
MslI CAYNNNNRTG 2 cut(s) 573, 947
MspA1I CMGCKG 2 cut(s) 79, 929
MspI CCGG 1 cut(s) 308
MspR9I CCNGG 2 cut(s) 191, 308
Mva1269I GAATGC 1 cut(s) 29
MvaI CCWGG 1 cut(s) 191
MvnI CGCG 5 cut(s) 52, 185, 245, 247, 705
MwoI GCNNNNNNNGC 8 cut(s) 85, 160, 371, 437, 468, 711, 746, 830
NciI CCSGG 1 cut(s) 308
NcoI CCATGG 1 cut(s) 1056
NdeI CATATG 1 cut(s) 850
NlaIII CATG 7 cut(s) 600, 628, 844, 870, 902, 987, 1060
NlaIV GGNNCC 4 cut(s) 136, 353, 375, 505
NmeAIII GCCGAG 2 cut(s) 263, 337
NmuCI GTSAC 2 cut(s) 283, 433
NsbI TGCGCA 1 cut(s) 57
NspV TTCGAA 1 cut(s) 213
OliI CACNNNNGTG 1 cut(s) 573
PagI TCATGA 1 cut(s) 624
PciSI GCTCTTC 1 cut(s) 161
PcsI WCGNNNNNNNCGW 2 cut(s) 102, 464
PctI GAATGC 1 cut(s) 29
PfeI GAWTC 2 cut(s) 379, 394
Pfl23II CGTACG 1 cut(s) 180
PflMI CCANNNNNTGG 2 cut(s) 514, 692
PleI GAGTC 5 cut(s) 280, 330, 333, 596, 1046
PpsI GAGTC 5 cut(s) 280, 330, 333, 596, 1046
Psp6I CCWGG 1 cut(s) 189
PspGI CCWGG 1 cut(s) 189
PspLI CGTACG 1 cut(s) 180
PspN4I GGNNCC 4 cut(s) 136, 353, 375, 505
PspPI GGNCC 2 cut(s) 809, 1030
PstI CTGCAG 1 cut(s) 1078
PstNI CAGNNNCTG 1 cut(s) 1082
PsuI RGATCY 1 cut(s) 73
PvuII CAGCTG 1 cut(s) 929
RsaI GTAC 4 cut(s) 182, 484, 644, 697
RsaNI GTAC 4 cut(s) 181, 483, 643, 696
RseI CAYNNNNRTG 2 cut(s) 573, 947
SalI GTCGAC 1 cut(s) 95
SapI GCTCTTC 1 cut(s) 161
SaqAI TTAA 1 cut(s) 444
Sau96I GGNCC 2 cut(s) 809, 1030
ScaI AGTACT 1 cut(s) 484
SchI GAGTC 5 cut(s) 280, 330, 334, 596, 1046
ScrFI CCNGG 2 cut(s) 191, 308
SduI GDGCHC 4 cut(s) 201, 458, 508, 624
SfaNI GCATC 4 cut(s) 246, 352, 599, 1088
SfcI CTRYAG 3 cut(s) 205, 486, 1074
SfuI TTCGAA 1 cut(s) 213
SmiMI CAYNNNNRTG 2 cut(s) 573, 947
Sse9I AATT 5 cut(s) 167, 716, 732, 751, 783
SsiI CCGC 8 cut(s) 77, 102, 243, 438, 462, 618, 705, 1044
StyD4I CCNGG 2 cut(s) 189, 306
StyI CCWWGG 2 cut(s) 369, 1056
TaaI ACNGT 3 cut(s) 632, 1069, 1101
TaqI TCGA 3 cut(s) 96, 213, 261
TaqII GACCGA 1 cut(s) 404
TasI AATT 5 cut(s) 167, 716, 732, 751, 783
TatI WGTACW 2 cut(s) 482, 642
TauI GCSGC 2 cut(s) 105, 245
TfiI GAWTC 2 cut(s) 379, 394
Tru1I TTAA 1 cut(s) 444
Tru9I TTAA 1 cut(s) 444
TscAI CASTG 6 cut(s) 547, 637, 697, 763, 825, 840
TseFI GTSAC 2 cut(s) 283, 433
TseI GCWGC 9 cut(s) 547, 550, 711, 737, 788, 907, 926, 1073, 1076
Tsp45I GTSAC 2 cut(s) 283, 433
TspDTI ATGAA 6 cut(s) 585, 641, 683, 789, 829, 965
TspRI CASTG 6 cut(s) 547, 637, 697, 763, 825, 840
Van91I CCANNNNNTGG 2 cut(s) 514, 692
XapI RAATTY 1 cut(s) 716
XmiI GTMKAC 2 cut(s) 96, 1050
ZrmI AGTACT 1 cut(s) 484
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.