F-Box protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G16290 AT2G16300 AT2G16365 AT2G16365 AT2G16365 AT2G16365 AT2G16365 AT2G16365 AT4G34550 AT4G34550 |
| fragaria_vesca | FvH4_2g09190 FvH4_2g09190 FvH4_2g09190 FvH4_2g09190 |
| malus_domestica | MD05G1064100.v1.1 MD10G1072800.v1.1 |
| prunus_persica | Prupe.8G094200_v2.0.a1 Prupe.8G094200_v2.0.a1 Prupe.8G094200_v2.0.a1 |
| pyrus_communis | pycom05g05530 pycom10g05750 |
| rosa_chinensis | RchiOBHm_Chr6g0265031 |
| rosa_laevigata | RLG00000014214 |
| rosa_multiflora | Rmu_sc0002934.1_g000016 Rmu_sc0011803.1_g000002 Rmu_sc0042979.1_g000001 |
| rosa_roxburghii | Rroxscaffold_175G00432110 Rroxscaffold_7G00203080 |
| rosa_rugosa | Rorug06G0013500 Rorug06G0013600 |
| rosa_samantha | Rh6AG136300 Rh6BG133200 Rh6CG131700 Rh6DG119000 |
| rosa_wichuraiana | Rw6G011760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 3 cut(s) | 415, 448, 1614 |
| Acc36I | ACCTGC | 3 cut(s) | 415, 448, 1614 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1528 |
| AciI | CCGC | 4 cut(s) | 453, 761, 1265, 1746 |
| AclI | AACGTT | 1 cut(s) | 1966 |
| AclWI | GGATC | 1 cut(s) | 1815 |
| AcoI | YGGCCR | 1 cut(s) | 929 |
| AcsI | RAATTY | 6 cut(s) | 364, 823, 1570, 1721, 1866, 1988 |
| AcuI | CTGAAG | 4 cut(s) | 923, 1101, 1392, 1959 |
| AcyI | GRCGYC | 1 cut(s) | 1340 |
| AfaI | GTAC | 4 cut(s) | 387, 771, 1245, 1672 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1528, 1616, 1772 |
| AgsI | TTSAA | 9 cut(s) | 273, 1126, 1195, 1515, 1575, 1871, 1957, 1972, 1994 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 647 |
| AhlI | ACTAGT | 1 cut(s) | 1754 |
| AjnI | CCWGG | 5 cut(s) | 419, 1186, 1311, 1327, 1615 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 153, 185 |
| Alw21I | GWGCWC | 4 cut(s) | 575, 1090, 1149, 1217 |
| Alw26I | GTCTC | 2 cut(s) | 1496, 1643 |
| AlwI | GGATC | 1 cut(s) | 1815 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 539, 1985 |
| Ama87I | CYCGRG | 2 cut(s) | 1602, 1855 |
| AoxI | GGCC | 3 cut(s) | 301, 929, 2040 |
| ApeKI | GCWGC | 6 cut(s) | 870, 873, 1198, 1561, 1620, 2018 |
| ApoI | RAATTY | 6 cut(s) | 364, 823, 1570, 1721, 1866, 1988 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2066, 2098 |
| AseI | ATTAAT | 3 cut(s) | 524, 612, 663 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1135 |
| AspS9I | GGNCC | 3 cut(s) | 1013, 1598, 1607 |
| AsuC2I | CCSGG | 1 cut(s) | 450 |
| AsuHPI | GGTGA | 6 cut(s) | 47, 396, 472, 901, 1374, 1847 |
| AsuII | TTCGAA | 1 cut(s) | 620 |
| AvaI | CYCGRG | 2 cut(s) | 1602, 1855 |
| AvaII | GGWCC | 3 cut(s) | 1013, 1598, 1607 |
| BanII | GRGCYC | 4 cut(s) | 427, 1090, 1149, 1217 |
| BbsI | GAAGAC | 2 cut(s) | 317, 1836 |
| Bbv12I | GWGCWC | 4 cut(s) | 575, 1090, 1149, 1217 |
| BbvCI | CCTCAGC | 1 cut(s) | 993 |
| BbvI | GCAGC | 6 cut(s) | 882, 885, 1185, 1573, 1632, 2005 |
| BccI | CCATC | 6 cut(s) | 76, 288, 725, 1357, 1792, 2064 |
| BciT130I | CCWGG | 5 cut(s) | 421, 1188, 1313, 1329, 1617 |
| BciVI | GTATCC | 2 cut(s) | 911, 955 |
| BcnI | CCSGG | 1 cut(s) | 450 |
| BcoDI | GTCTC | 2 cut(s) | 1496, 1643 |
| BcuI | ACTAGT | 1 cut(s) | 1754 |
| BfaI | CTAG | 4 cut(s) | 632, 723, 1431, 1755 |
| BfmI | CTRYAG | 1 cut(s) | 1218 |
| BfuAI | ACCTGC | 3 cut(s) | 415, 448, 1614 |
| BfuI | GTATCC | 2 cut(s) | 911, 955 |
| BisI | GCNGC | 6 cut(s) | 871, 874, 1199, 1562, 1621, 2019 |
| BlpI | GCTNAGC | 1 cut(s) | 1557 |
| BlsI | GCNGC | 6 cut(s) | 872, 875, 1200, 1563, 1622, 2020 |
| Bme1390I | CCNGG | 6 cut(s) | 421, 450, 1188, 1313, 1329, 1617 |
| Bme18I | GGWCC | 3 cut(s) | 1013, 1598, 1607 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 647 |
| BmeT110I | CYCGRG | 2 cut(s) | 1602, 1855 |
| BmgT120I | GGNCC | 3 cut(s) | 1013, 1598, 1607 |
| BmiI | GGNNCC | 2 cut(s) | 1260, 1608 |
| BmrFI | CCNGG | 6 cut(s) | 421, 450, 1188, 1313, 1329, 1617 |
| BmsI | GCATC | 5 cut(s) | 19, 145, 748, 1294, 1931 |
| BpiI | GAAGAC | 2 cut(s) | 317, 1836 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 386, 418, 1639, 1671 |
| BpmI | CTGGAG | 3 cut(s) | 769, 1029, 1146 |
| Bpu10I | CCTNAGC | 1 cut(s) | 993 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1557 |
| Bpu14I | TTCGAA | 1 cut(s) | 620 |
| BpuEI | CTTGAG | 4 cut(s) | 500, 655, 1074, 1625 |
| BpuMI | CCSGG | 1 cut(s) | 450 |
| BsaHI | GRCGYC | 1 cut(s) | 1340 |
| BsaJI | CCNNGG | 5 cut(s) | 120, 420, 1150, 1601, 1892 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1077, 1107 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1528, 1616, 1772 |
| Bse1I | ACTGG | 3 cut(s) | 304, 844, 1140 |
| Bse3DI | GCAATG | 3 cut(s) | 417, 1581, 2013 |
| BseBI | CCWGG | 5 cut(s) | 421, 1188, 1313, 1329, 1617 |
| BseDI | CCNNGG | 5 cut(s) | 120, 420, 1150, 1601, 1892 |
| BseGI | GGATG | 8 cut(s) | 87, 99, 160, 1309, 1537, 1888, 1922, 2056 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1528, 1616, 1772 |
| BseMI | GCAATG | 3 cut(s) | 417, 1581, 2013 |
| BseMII | CTCAG | 4 cut(s) | 495, 984, 1548, 1670 |
| BseNI | ACTGG | 3 cut(s) | 304, 844, 1140 |
| BseRI | GAGGAG | 1 cut(s) | 617 |
| BseXI | GCAGC | 6 cut(s) | 882, 885, 1185, 1573, 1632, 2005 |
| BseYI | CCCAGC | 1 cut(s) | 493 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1269 |
| BshFI | GGCC | 3 cut(s) | 303, 931, 2042 |
| BsiEI | CGRYCG | 1 cut(s) | 1269 |
| BsiHKAI | GWGCWC | 4 cut(s) | 575, 1090, 1149, 1217 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1602, 1855 |
| BsiSI | CCGG | 1 cut(s) | 450 |
| BslFI | GGGAC | 2 cut(s) | 864, 1620 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1528, 1616, 1772 |
| BsmAI | GTCTC | 2 cut(s) | 1496, 1643 |
| BsmBI | CGTCTC | 1 cut(s) | 1643 |
| BsmFI | GGGAC | 2 cut(s) | 864, 1620 |
| BsnI | GGCC | 3 cut(s) | 303, 931, 2042 |
| BsoBI | CYCGRG | 2 cut(s) | 1602, 1855 |
| Bsp119I | TTCGAA | 1 cut(s) | 620 |
| Bsp1286I | GDGCHC | 5 cut(s) | 427, 575, 1090, 1149, 1217 |
| Bsp143I | GATC | 5 cut(s) | 7, 20, 530, 728, 1807 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1557 |
| BspACI | CCGC | 4 cut(s) | 453, 761, 1265, 1746 |
| BspANI | GGCC | 3 cut(s) | 303, 931, 2042 |
| BspCNI | CTCAG | 4 cut(s) | 496, 985, 1549, 1669 |
| BspHI | TCATGA | 2 cut(s) | 172, 691 |
| BspLI | GGNNCC | 2 cut(s) | 1260, 1608 |
| BspMI | ACCTGC | 3 cut(s) | 415, 448, 1614 |
| BspPI | GGATC | 1 cut(s) | 1815 |
| BspT104I | TTCGAA | 1 cut(s) | 620 |
| BsrDI | GCAATG | 3 cut(s) | 417, 1581, 2013 |
| BsrI | ACTGG | 3 cut(s) | 304, 844, 1140 |
| BssECI | CCNNGG | 5 cut(s) | 120, 420, 1150, 1601, 1892 |
| BssMI | GATC | 5 cut(s) | 7, 20, 530, 728, 1807 |
| BssNI | GRCGYC | 1 cut(s) | 1340 |
| BssT1I | CCWWGG | 2 cut(s) | 120, 1892 |
| Bst2UI | CCWGG | 5 cut(s) | 421, 1188, 1313, 1329, 1617 |
| Bst4CI | ACNGT | 7 cut(s) | 373, 923, 985, 1104, 1111, 1226, 1981 |
| Bst6I | CTCTTC | 3 cut(s) | 633, 1413, 1705 |
| BstACI | GRCGYC | 1 cut(s) | 1340 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 416, 1478 |
| BstBI | TTCGAA | 1 cut(s) | 620 |
| BstC8I | GCNNGC | 5 cut(s) | 54, 189, 417, 432, 455 |
| BstDEI | CTNAG | 5 cut(s) | 389, 504, 993, 1557, 1656 |
| BstDSI | CCRYGG | 1 cut(s) | 1150 |
| BstEII | GGTNACC | 1 cut(s) | 889 |
| BstF5I | GGATG | 8 cut(s) | 87, 99, 160, 1309, 1537, 1888, 1922, 2056 |
| BstKTI | GATC | 5 cut(s) | 10, 23, 533, 731, 1810 |
| BstMAI | GTCTC | 2 cut(s) | 1496, 1643 |
| BstMBI | GATC | 5 cut(s) | 7, 20, 530, 728, 1807 |
| BstMCI | CGRYCG | 1 cut(s) | 1269 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 416, 431, 949, 1478, 1487, 1982, 2024 |
| BstNI | CCWGG | 5 cut(s) | 421, 1188, 1313, 1329, 1617 |
| BstNSI | RCATGY | 3 cut(s) | 129, 191, 1364 |
| BstPI | GGTNACC | 1 cut(s) | 889 |
| BstSCI | CCNGG | 6 cut(s) | 419, 448, 1186, 1311, 1327, 1615 |
| BstSFI | CTRYAG | 1 cut(s) | 1218 |
| BstV1I | GCAGC | 6 cut(s) | 882, 885, 1185, 1573, 1632, 2005 |
| BstV2I | GAAGAC | 2 cut(s) | 317, 1836 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 685 |
| BsuI | GTATCC | 2 cut(s) | 911, 955 |
| BsuRI | GGCC | 3 cut(s) | 303, 931, 2042 |
| BtgI | CCRYGG | 1 cut(s) | 1150 |
| BtsCI | GGATG | 8 cut(s) | 87, 99, 160, 1309, 1537, 1888, 1922, 2056 |
| BtsI | GCAGTG | 1 cut(s) | 1950 |
| BtsIMutI | CAGTG | 3 cut(s) | 1147, 1231, 1950 |
| BveI | ACCTGC | 3 cut(s) | 415, 448, 1614 |
| Cac8I | GCNNGC | 5 cut(s) | 54, 189, 417, 432, 455 |
| CaiI | CAGNNNCTG | 2 cut(s) | 539, 1985 |
| CciI | TCATGA | 2 cut(s) | 172, 691 |
| Cfr13I | GGNCC | 3 cut(s) | 1013, 1598, 1607 |
| CseI | GACGC | 1 cut(s) | 1329 |
| Csp6I | GTAC | 4 cut(s) | 386, 770, 1244, 1671 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 109, 144 |
| CviQI | GTAC | 4 cut(s) | 386, 770, 1244, 1671 |
| DdeI | CTNAG | 5 cut(s) | 389, 504, 993, 1557, 1656 |
| DpnI | GATC | 5 cut(s) | 9, 22, 532, 730, 1809 |
| DpnII | GATC | 5 cut(s) | 7, 20, 530, 728, 1807 |
| DriI | GACNNNNNGTC | 1 cut(s) | 647 |
| EaeI | YGGCCR | 1 cut(s) | 929 |
| Eam1104I | CTCTTC | 3 cut(s) | 633, 1413, 1705 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 647 |
| EarI | CTCTTC | 3 cut(s) | 633, 1413, 1705 |
| Ecl136II | GAGCTC | 3 cut(s) | 1088, 1147, 1215 |
| Eco130I | CCWWGG | 2 cut(s) | 120, 1892 |
| Eco24I | GRGCYC | 4 cut(s) | 427, 1090, 1149, 1217 |
| Eco47I | GGWCC | 3 cut(s) | 1013, 1598, 1607 |
| Eco53kI | GAGCTC | 3 cut(s) | 1088, 1147, 1215 |
| Eco57I | CTGAAG | 4 cut(s) | 923, 1101, 1392, 1959 |
| Eco88I | CYCGRG | 2 cut(s) | 1602, 1855 |
| Eco91I | GGTNACC | 1 cut(s) | 889 |
| EcoICRI | GAGCTC | 3 cut(s) | 1088, 1147, 1215 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1013, 1598 |
| EcoO65I | GGTNACC | 1 cut(s) | 889 |
| EcoRII | CCWGG | 5 cut(s) | 419, 1186, 1311, 1327, 1615 |
| EcoT14I | CCWWGG | 2 cut(s) | 120, 1892 |
| EcoT38I | GRGCYC | 4 cut(s) | 427, 1090, 1149, 1217 |
| ErhI | CCWWGG | 2 cut(s) | 120, 1892 |
| Esp3I | CGTCTC | 1 cut(s) | 1643 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 176, 208 |
| FaqI | GGGAC | 2 cut(s) | 864, 1620 |
| FauI | CCCGC | 1 cut(s) | 446 |
| FauNDI | CATATG | 1 cut(s) | 25 |
| Fnu4HI | GCNGC | 6 cut(s) | 871, 874, 1199, 1562, 1621, 2019 |
| FokI | GGATG | 8 cut(s) | 94, 106, 167, 1316, 1544, 1875, 1909, 2043 |
| FriOI | GRGCYC | 4 cut(s) | 427, 1090, 1149, 1217 |
| Fsp4HI | GCNGC | 6 cut(s) | 871, 874, 1199, 1562, 1621, 2019 |
| FspBI | CTAG | 4 cut(s) | 632, 723, 1431, 1755 |
| GluI | GCNGC | 6 cut(s) | 871, 874, 1199, 1562, 1621, 2019 |
| GsaI | CCCAGC | 1 cut(s) | 497 |
| GsuI | CTGGAG | 3 cut(s) | 769, 1029, 1146 |
| HaeIII | GGCC | 3 cut(s) | 303, 931, 2042 |
| HapII | CCGG | 1 cut(s) | 450 |
| HgaI | GACGC | 1 cut(s) | 1329 |
| Hin1I | GRCGYC | 1 cut(s) | 1340 |
| HincII | GTYRAC | 3 cut(s) | 988, 1072, 1107 |
| HindII | GTYRAC | 3 cut(s) | 988, 1072, 1107 |
| HindIII | AAGCTT | 1 cut(s) | 1134 |
| HinfI | GANTC | 8 cut(s) | 71, 506, 536, 1191, 1271, 1838, 1853, 1897 |
| HpaI | GTTAAC | 1 cut(s) | 1072 |
| HpaII | CCGG | 1 cut(s) | 450 |
| HphI | GGTGA | 6 cut(s) | 47, 396, 472, 901, 1374, 1847 |
| Hpy166II | GTNNAC | 8 cut(s) | 99, 386, 797, 988, 1072, 1107, 1717, 1760 |
| Hpy188III | TCNNGA | 9 cut(s) | 173, 479, 515, 692, 723, 786, 1008, 1163, 1592 |
| Hpy8I | GTNNAC | 8 cut(s) | 99, 386, 797, 988, 1072, 1107, 1717, 1760 |
| HpyCH4III | ACNGT | 7 cut(s) | 373, 923, 985, 1104, 1111, 1226, 1981 |
| HpyCH4IV | ACGT | 2 cut(s) | 1636, 1966 |
| HpyCH4V | TGCA | 9 cut(s) | 410, 430, 838, 952, 1472, 1481, 1586, 1817, 2072 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 416, 431, 949, 1478, 1487, 1982, 2024 |
| HpyF3I | CTNAG | 5 cut(s) | 389, 504, 993, 1557, 1656 |
| HpySE526I | ACGT | 2 cut(s) | 1636, 1966 |
| Hsp92I | GRCGYC | 1 cut(s) | 1340 |
| KspAI | GTTAAC | 1 cut(s) | 1072 |
| Kzo9I | GATC | 5 cut(s) | 7, 20, 530, 728, 1807 |
| LmnI | GCTCC | 6 cut(s) | 570, 1085, 1152, 1212, 1264, 1427 |
| Lsp1109I | GCAGC | 6 cut(s) | 882, 885, 1185, 1573, 1632, 2005 |
| LweI | GCATC | 5 cut(s) | 19, 145, 748, 1294, 1931 |
| MaeI | CTAG | 4 cut(s) | 632, 723, 1431, 1755 |
| MaeII | ACGT | 2 cut(s) | 1636, 1966 |
| MaeIII | GTNAC | 5 cut(s) | 13, 214, 398, 889, 1380 |
| MalI | GATC | 5 cut(s) | 9, 22, 532, 730, 1809 |
| MboI | GATC | 5 cut(s) | 7, 20, 530, 728, 1807 |
| MhlI | GDGCHC | 5 cut(s) | 427, 575, 1090, 1149, 1217 |
| MlyI | GAGTC | 3 cut(s) | 515, 1847, 1847 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1135 |
| MseI | TTAA | 9 cut(s) | 180, 524, 561, 612, 663, 1071, 1632, 1826, 2113 |
| MslI | CAYNNNNRTG | 2 cut(s) | 381, 2061 |
| MspA1I | CMGCKG | 1 cut(s) | 497 |
| MspI | CCGG | 1 cut(s) | 450 |
| MspR9I | CCNGG | 6 cut(s) | 421, 450, 1188, 1313, 1329, 1617 |
| MvaI | CCWGG | 5 cut(s) | 421, 1188, 1313, 1329, 1617 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 416, 431, 949, 1478, 1487, 1982, 2024 |
| NciI | CCSGG | 1 cut(s) | 450 |
| NdeI | CATATG | 1 cut(s) | 25 |
| NdeII | GATC | 5 cut(s) | 7, 20, 530, 728, 1807 |
| NlaIV | GGNNCC | 2 cut(s) | 1260, 1608 |
| NmeAIII | GCCGAG | 1 cut(s) | 907 |
| NmuCI | GTSAC | 2 cut(s) | 889, 1380 |
| NspI | RCATGY | 3 cut(s) | 129, 191, 1364 |
| NspV | TTCGAA | 1 cut(s) | 620 |
| PaeI | GCATGC | 1 cut(s) | 191 |
| PagI | TCATGA | 2 cut(s) | 172, 691 |
| PaqCI | CACCTGC | 3 cut(s) | 415, 448, 1614 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 16 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1135 |
| PfeI | GAWTC | 5 cut(s) | 71, 536, 1191, 1271, 1897 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1528 |
| PfoI | TCCNGGA | 1 cut(s) | 1311 |
| PkrI | GCNGC | 6 cut(s) | 872, 875, 1200, 1563, 1622, 2020 |
| PleI | GAGTC | 3 cut(s) | 514, 1846, 1847 |
| PpsI | GAGTC | 3 cut(s) | 514, 1846, 1847 |
| PpuMI | RGGWCCY | 2 cut(s) | 1013, 1598 |
| PshBI | ATTAAT | 3 cut(s) | 524, 612, 663 |
| Psp124BI | GAGCTC | 3 cut(s) | 1090, 1149, 1217 |
| Psp1406I | AACGTT | 1 cut(s) | 1966 |
| Psp5II | RGGWCCY | 2 cut(s) | 1013, 1598 |
| Psp6I | CCWGG | 5 cut(s) | 419, 1186, 1311, 1327, 1615 |
| PspEI | GGTNACC | 1 cut(s) | 889 |
| PspFI | CCCAGC | 1 cut(s) | 493 |
| PspGI | CCWGG | 5 cut(s) | 419, 1186, 1311, 1327, 1615 |
| PspN4I | GGNNCC | 2 cut(s) | 1260, 1608 |
| PspPI | GGNCC | 3 cut(s) | 1013, 1598, 1607 |
| PspPPI | RGGWCCY | 2 cut(s) | 1013, 1598 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1741, 1773 |
| PstNI | CAGNNNCTG | 2 cut(s) | 539, 1985 |
| PvuII | CAGCTG | 1 cut(s) | 497 |
| RsaI | GTAC | 4 cut(s) | 387, 771, 1245, 1672 |
| RsaNI | GTAC | 4 cut(s) | 386, 770, 1244, 1671 |
| RseI | CAYNNNNRTG | 2 cut(s) | 381, 2061 |
| SacI | GAGCTC | 3 cut(s) | 1090, 1149, 1217 |
| SaqAI | TTAA | 9 cut(s) | 180, 524, 561, 612, 663, 1071, 1632, 1826, 2113 |
| SatI | GCNGC | 6 cut(s) | 871, 874, 1199, 1562, 1621, 2019 |
| Sau3AI | GATC | 5 cut(s) | 7, 20, 530, 728, 1807 |
| Sau96I | GGNCC | 3 cut(s) | 1013, 1598, 1607 |
| SchI | GAGTC | 3 cut(s) | 515, 1847, 1847 |
| ScrFI | CCNGG | 6 cut(s) | 421, 450, 1188, 1313, 1329, 1617 |
| SduI | GDGCHC | 5 cut(s) | 427, 575, 1090, 1149, 1217 |
| SfaNI | GCATC | 5 cut(s) | 19, 145, 748, 1294, 1931 |
| SfcI | CTRYAG | 1 cut(s) | 1218 |
| SfuI | TTCGAA | 1 cut(s) | 620 |
| SinI | GGWCC | 3 cut(s) | 1013, 1598, 1607 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 381, 2061 |
| SmlI | CTYRAG | 4 cut(s) | 479, 670, 1089, 1640 |
| SmoI | CTYRAG | 4 cut(s) | 479, 670, 1089, 1640 |
| SpeI | ACTAGT | 1 cut(s) | 1754 |
| SphI | GCATGC | 1 cut(s) | 191 |
| SsiI | CCGC | 4 cut(s) | 453, 761, 1265, 1746 |
| SspI | AATATT | 1 cut(s) | 169 |
| SspMI | CTAG | 4 cut(s) | 632, 723, 1431, 1755 |
| SstI | GAGCTC | 3 cut(s) | 1090, 1149, 1217 |
| StyD4I | CCNGG | 6 cut(s) | 419, 448, 1186, 1311, 1327, 1615 |
| StyI | CCWWGG | 2 cut(s) | 120, 1892 |
| TaaI | ACNGT | 7 cut(s) | 373, 923, 985, 1104, 1111, 1226, 1981 |
| TaiI | ACGT | 2 cut(s) | 1639, 1969 |
| TaqI | TCGA | 4 cut(s) | 620, 640, 746, 1269 |
| TatI | WGTACW | 1 cut(s) | 385 |
| TfiI | GAWTC | 5 cut(s) | 71, 536, 1191, 1271, 1897 |
| Tru1I | TTAA | 9 cut(s) | 180, 524, 561, 612, 663, 1071, 1632, 1826, 2113 |
| Tru9I | TTAA | 9 cut(s) | 180, 524, 561, 612, 663, 1071, 1632, 1826, 2113 |
| TscAI | CASTG | 3 cut(s) | 1147, 1231, 1950 |
| TseFI | GTSAC | 2 cut(s) | 889, 1380 |
| TseI | GCWGC | 6 cut(s) | 870, 873, 1198, 1561, 1620, 2018 |
| Tsp45I | GTSAC | 2 cut(s) | 889, 1380 |
| TspDTI | ATGAA | 8 cut(s) | 48, 134, 161, 534, 580, 729, 1722, 1754 |
| TspGWI | ACGGA | 1 cut(s) | 1139 |
| TspRI | CASTG | 3 cut(s) | 1147, 1231, 1950 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1528 |
| VpaK11BI | GGWCC | 3 cut(s) | 1013, 1598, 1607 |
| VspI | ATTAAT | 3 cut(s) | 524, 612, 663 |
| XapI | RAATTY | 6 cut(s) | 364, 823, 1570, 1721, 1866, 1988 |
| XbaI | TCTAGA | 1 cut(s) | 722 |
| XceI | RCATGY | 3 cut(s) | 129, 191, 1364 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 851, 1623 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1135 |
| XspI | CTAG | 4 cut(s) | 632, 723, 1431, 1755 |