Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0003600

Physical Location & Seq

Genomic Coordinates Reverse (-)

6690331 .. 6692766

Gene Structure 2436 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g05530.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

ATGTCTGATCGGGTTGCGCGATCGTATCATGGTAGTGAAGGAACAAGTGAGCTAGCTTCACATCCTTACGAATCTGTTTGGATGGCTCATTGGATGTGCAGAAGTTGTAAGTTAGAAACCAAAGCTCGTGGCCATGTATCAATTCGTTATGAGGAGGCGCAACAACACAATTGTGGTGTTAAGAAGCATTCCTTGTTTAGAGGGTTCGGAGAAGTAACTGAACCGAAGAGAGTAAGAAAGATCGATGGGGGTCTCAGTCTGGCAGAGAGTTCAAAGAAAACAAGGAAAGCGATATCAGAAGGCCAGTCCTTTCCAATGTTCAGTGTTCCTCCAAAGGCTAGTGTGGCTAAACCAAATCAGAAAAATTCTACTTTCCATGGGGGAGTACTTACTGAGTGTAGCCCACCAGCATTGCCTGCCTGGACTCATGCTGATGCATGGGCTTTGGGAGCCACATCACCGCCTCCAGAGCAACAGGTGAAATATCATAATTTTCTTGATAACAATAGCCTAGCTGTTTCCAAGTCTTTTCAGGATGAATCAACGAGATCAGATTCCAAAATTGTGCCGCATCAACTAAAGGGTGGGCGTACTTTCTCATCTTTCCTGTGTAGTGAAAAGGAAATTAATCTATCCAACTCTCTTTTTGCATCTCCACAACATGTCACAAACAGTTACAATCACACGTTGGCTCACGAGAAAAACTTCGATAACAATTTTGTCTCTAGAAGATCAGGAGGTTCATTACCAAGGCAGAATGATATGGTTTTTTTACAGCACAACCCCTCCACAAGCAGTAAGCAGCAACCGAATTTTTTCGGTAGGAATTTCCTGGAAATGCAAAATCAGTCTGGTATTGGATTGCTTTCAAGCCACACCAGTCCCCAAGAGGTGACCGAACTGGAAAAGGTATTTCACCGATCTCTGCCAAGCCTGCAGTGTTCTGTGCATAACACAGAGACTATGAGAATATGTGCTACTGTCAATGCTGAGGAAGAATCATCTAGAGGTCCTCCCGTGTTTTCAAAGACAACTCACCATTTTCAGATCACAAAAAAGACTGGTGTTAACTTGCCTGAACGAGGTCAAGTGTTCGGACAGTCAACTGCATCAACAAAATTGAAAGGAAAAGCTTTCGGTGATCTTTTTGGTTTTTCCACGGACTATGGTCTCCCTGCTCAGCCTAGATTAAAGCTACTACCTTACAGGAGCCCTACAGAGAGTAACGGAGAGGAAGATGTAAGAGATGTCGAGGCTTATGCACTCGATTCATCATCTGAAACAGATATTTTGGACATGGATGCTTTCCAGGATAACCTTCTTCCTGGTGTAGCGTCATCCTCATCAGATAAGCATGTTGAGAGTACCAAGAAGTCACCAAAATCTCGATCAGCCTTCACTTCAGGTGGAGAAGAGAATGGAGCTAGACTTCTGTACACAAAATTACCTGATATAAATCAAGAGCTTCCCAATTCAGCAGAAGAAAGGGAGACGAGCACTTCAAGAACCCAAAGTTTGGGTGCGGAACATCTCCTTTCTCATGCTGAGCAGCCGACAAATTCGAACTGCAATGCGTGTCAAGAAGGATCTCAGGGACTAGAAACAAGAAGCAGTTGGATTAAACGGCTCAAGTTGTCTGCAACTCAGCCTGCTTATGGTGCAAAAAGCTCAAACAGTAGATTTCTTGGTAAAGAACAGATGGTGCCAGATCAAGCTGCAATGCTATTAAGGGATTGGGAGTCGTCTCCCATTGACTCAGCCAGGAAAGGTCGAAATATAATGCTTTCTCATCCTTGGATTCAGAGGTGGTCTAAAGTACCATCCCAAAAGAAGTCTGAAAAAGTTGTTTTTCAATCACAATGTTCGAAGCCAACCGTAGATGAGTTTCAGAAGAAGCAATTTCCAAGCATTGCTGCTATGGCACTCATGGGAAAGGCCATGAATGGTTTCCATCCATGTGAGTTTACGAACAAAGGGTCTTTTGTAGTTTGGAGTACCAAGGATATTAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006996 GO:0007610 GO:0007622 GO:0007623 GO:0008150 GO:0009628 GO:0009657 GO:0009658 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048511 GO:0048512 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071840 GO:0080090 GO:0080167 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

671

Amino Acids

74.27

Weight (kDa)

8.95

Isoelectric Point (pI)

52.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003600)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16290 AT2G16300 AT2G16365 AT2G16365 AT2G16365 AT2G16365 AT2G16365 AT2G16365 AT4G34550 AT4G34550
fragaria_vesca	FvH4_2g09190 FvH4_2g09190 FvH4_2g09190 FvH4_2g09190
malus_domestica	MD05G1064100.v1.1 MD10G1072800.v1.1
prunus_persica	Prupe.8G094200_v2.0.a1 Prupe.8G094200_v2.0.a1 Prupe.8G094200_v2.0.a1
pyrus_communis	pycom05g05530 pycom10g05750
rosa_chinensis	RchiOBHm_Chr6g0265031
rosa_laevigata	RLG00000014214
rosa_multiflora	Rmu_sc0002934.1_g000016 Rmu_sc0011803.1_g000002 Rmu_sc0042979.1_g000001
rosa_roxburghii	Rroxscaffold_175G00432110 Rroxscaffold_7G00203080
rosa_rugosa	Rorug06G0013500 Rorug06G0013600
rosa_samantha	Rh6AG136300 Rh6BG133200 Rh6CG131700 Rh6DG119000
rosa_wichuraiana	Rw6G011760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1702
AccB7I	CCANNNNNTGG	1 cut(s)	1516
AccII	CGCG	1 cut(s)	19
AciI	CCGC	3 cut(s)	461, 569, 1523
AclWI	GGATC	1 cut(s)	1594
AcoI	YGGCCR	1 cut(s)	130
AcsI	RAATTY	4 cut(s)	364, 811, 826, 1558
AcuI	CTGAAG	1 cut(s)	1386
AfaI	GTAC	6 cut(s)	387, 592, 1366, 1436, 1818, 1996
AfiI	CCNNNNNNNGG	3 cut(s)	1082, 1516, 1655
AflIII	ACRYGT	2 cut(s)	661, 684
AgsI	TTSAA	6 cut(s)	273, 870, 1026, 1123, 1503, 1853
AjnI	CCWGG	5 cut(s)	419, 831, 1308, 1324, 1760
AleI	CACNNNNGTG	1 cut(s)	171
Alw21I	GWGCWC	1 cut(s)	1499
Alw26I	GTCTC	6 cut(s)	257, 727, 953, 1175, 1484, 1749
AlwI	GGATC	1 cut(s)	1594
AoxI	GGCC	3 cut(s)	130, 301, 1935
ApeKI	GCWGC	4 cut(s)	802, 1549, 1715, 1913
ApoI	RAATTY	4 cut(s)	364, 811, 826, 1558
ArsI	GACNNNNNNTTYG	2 cut(s)	1961, 1993
AseI	ATTAAT	1 cut(s)	627
Asp700I	GAANNNNTTC	3 cut(s)	704, 815, 1946
AspLEI	GCGC	2 cut(s)	19, 160
AspS9I	GGNCC	1 cut(s)	1010
AsuHPI	GGTGA	7 cut(s)	450, 490, 904, 908, 1028, 1151, 1368
AsuII	TTCGAA	2 cut(s)	1562, 1865
AsuNHI	GCTAGC	1 cut(s)	52
AvaII	GGWCC	1 cut(s)	1010
BalI	TGGCCA	1 cut(s)	132
BanI	GGYRCC	1 cut(s)	1702
BanII	GRGCYC	1 cut(s)	1214
BauI	CACGAG	2 cut(s)	126, 695
Bbv12I	GWGCWC	1 cut(s)	1499
BbvCI	CCTCAGC	1 cut(s)	990
BbvI	GCAGC	4 cut(s)	814, 1561, 1702, 1900
BccI	CCATC	5 cut(s)	76, 239, 1693, 1828, 1959
BceAI	ACGGC	1 cut(s)	1640
BcgI	CGANNNNNNTGC	2 cut(s)	1241, 1275
BciT130I	CCWGG	5 cut(s)	421, 833, 1310, 1326, 1762
BcoDI	GTCTC	6 cut(s)	257, 727, 953, 1175, 1484, 1749
BfaI	CTAG	8 cut(s)	53, 339, 512, 726, 1005, 1185, 1425, 1598
BfmI	CTRYAG	2 cut(s)	935, 1215
BisI	GCNGC	5 cut(s)	569, 803, 1550, 1716, 1914
BlpI	GCTNAGC	2 cut(s)	1179, 1545
BlsI	GCNGC	5 cut(s)	570, 804, 1551, 1717, 1915
BmcAI	AGTACT	1 cut(s)	387
Bme1390I	CCNGG	5 cut(s)	421, 833, 1310, 1326, 1762
Bme18I	GGWCC	1 cut(s)	1010
BmgT120I	GGNCC	1 cut(s)	1010
BmiI	GGNNCC	3 cut(s)	451, 1211, 1704
BmrFI	CCNGG	5 cut(s)	421, 833, 1310, 1326, 1762
BmsI	GCATC	5 cut(s)	424, 580, 659, 1118, 1291
BmtI	GCTAGC	1 cut(s)	56
BoxI	GACNNNNGTC	1 cut(s)	1167
BpmI	CTGGAG	1 cut(s)	450
Bpu10I	CCTNAGC	1 cut(s)	990
Bpu1102I	GCTNAGC	2 cut(s)	1179, 1545
Bpu14I	TTCGAA	2 cut(s)	1562, 1865
BpuEI	CTTGAG	1 cut(s)	1613
Bsa29I	ATCGAT	1 cut(s)	243
BsaBI	GATNNNNATC	1 cut(s)	1455
BsaI	GGTCTC	2 cut(s)	257, 1175
BsaJI	CCNNGG	5 cut(s)	376, 749, 1158, 1793, 1998
BsaXI	ACNNNNNCTCC	2 cut(s)	770, 800
Bsc4I	CCNNNNNNNGG	3 cut(s)	1082, 1516, 1655
Bse1I	ACTGG	4 cut(s)	304, 879, 906, 1066
Bse3DI	GCAATG	4 cut(s)	410, 1576, 1725, 1908
Bse8I	GATNNNNATC	1 cut(s)	1455
BseBI	CCWGG	5 cut(s)	421, 833, 1310, 1326, 1762
BseCI	ATCGAT	1 cut(s)	243
BseDI	CCNNGG	5 cut(s)	376, 749, 1158, 1793, 1998
BseGI	GGATG	9 cut(s)	61, 87, 99, 541, 1306, 1337, 1789, 1820, 1951
BseJI	GATNNNNATC	1 cut(s)	1455
BseLI	CCNNNNNNNGG	3 cut(s)	1082, 1516, 1655
BseMI	GCAATG	4 cut(s)	410, 1576, 1725, 1908
BseMII	CTCAG	8 cut(s)	268, 384, 981, 1193, 1536, 1604, 1658, 1770
BseNI	ACTGG	4 cut(s)	304, 879, 906, 1066
BseRI	GAGGAG	1 cut(s)	167
BseXI	GCAGC	4 cut(s)	814, 1561, 1702, 1900
BsgI	GTGCAG	1 cut(s)	118
Bsh1236I	CGCG	1 cut(s)	19
Bsh1285I	CGRYCG	1 cut(s)	23
BshFI	GGCC	3 cut(s)	132, 303, 1937
BshNI	GGYRCC	1 cut(s)	1702
BshVI	ATCGAT	1 cut(s)	243
BsiEI	CGRYCG	1 cut(s)	23
BsiHKAI	GWGCWC	1 cut(s)	1499
BslFI	GGGAC	2 cut(s)	867, 1608
BslI	CCNNNNNNNGG	3 cut(s)	1082, 1516, 1655
BsmAI	GTCTC	6 cut(s)	257, 727, 953, 1175, 1484, 1749
BsmBI	CGTCTC	2 cut(s)	1484, 1749
BsmFI	GGGAC	2 cut(s)	867, 1608
BsmI	GAATGC	1 cut(s)	187
BsnI	GGCC	3 cut(s)	132, 303, 1937
Bso31I	GGTCTC	2 cut(s)	257, 1175
Bsp119I	TTCGAA	2 cut(s)	1562, 1865
Bsp1286I	GDGCHC	2 cut(s)	1214, 1499
Bsp1407I	TGTACA	1 cut(s)	1434
Bsp1720I	GCTNAGC	2 cut(s)	1179, 1545
Bsp19I	CCATGG	1 cut(s)	376
BspACI	CCGC	3 cut(s)	461, 569, 1523
BspANI	GGCC	3 cut(s)	132, 303, 1937
BspCNI	CTCAG	8 cut(s)	267, 385, 982, 1192, 1537, 1603, 1657, 1769
BspDI	ATCGAT	1 cut(s)	243
BspFNI	CGCG	1 cut(s)	19
BspLI	GGNNCC	3 cut(s)	451, 1211, 1704
BspMAI	CTGCAG	1 cut(s)	939
BspOI	GCTAGC	1 cut(s)	56
BspPI	GGATC	1 cut(s)	1594
BspT104I	TTCGAA	2 cut(s)	1562, 1865
BspT107I	GGYRCC	1 cut(s)	1702
BspTNI	GGTCTC	2 cut(s)	257, 1175
BsrDI	GCAATG	4 cut(s)	410, 1576, 1725, 1908
BsrGI	TGTACA	1 cut(s)	1434
BsrI	ACTGG	4 cut(s)	304, 879, 906, 1066
BssECI	CCNNGG	5 cut(s)	376, 749, 1158, 1793, 1998
BssSI	CACGAG	2 cut(s)	126, 695
BssT1I	CCWWGG	4 cut(s)	376, 749, 1793, 1998
Bst2BI	CACGAG	2 cut(s)	126, 695
Bst2UI	CCWGG	5 cut(s)	421, 833, 1310, 1326, 1762
Bst4CI	ACNGT	5 cut(s)	674, 982, 1101, 1676, 1876
Bst6I	CTCTTC	2 cut(s)	221, 1407
BstAPI	GCANNNNNTGC	1 cut(s)	416
BstAUI	TGTACA	1 cut(s)	1434
BstBI	TTCGAA	2 cut(s)	1562, 1865
BstC8I	GCNNGC	4 cut(s)	54, 417, 935, 1650
BstDEI	CTNAG	8 cut(s)	254, 393, 990, 1179, 1545, 1590, 1644, 1756
BstDSI	CCRYGG	2 cut(s)	376, 1158
BstEII	GGTNACC	1 cut(s)	892
BstENI	CCTNNNNNAGG	1 cut(s)	1080
BstF5I	GGATG	9 cut(s)	61, 87, 99, 541, 1306, 1337, 1789, 1820, 1951
BstFNI	CGCG	1 cut(s)	19
BstHHI	GCGC	2 cut(s)	19, 160
BstMAI	GTCTC	6 cut(s)	257, 727, 953, 1175, 1484, 1749
BstMCI	CGRYCG	1 cut(s)	23
BstMWI	GCNNNNNNNGC	7 cut(s)	344, 416, 449, 469, 934, 1658, 1919
BstNI	CCWGG	5 cut(s)	421, 833, 1310, 1326, 1762
BstNSI	RCATGY	2 cut(s)	665, 1358
BstPAI	GACNNNNGTC	1 cut(s)	1167
BstPI	GGTNACC	1 cut(s)	892
BstSCI	CCNGG	5 cut(s)	419, 831, 1308, 1324, 1760
BstSFI	CTRYAG	2 cut(s)	935, 1215
BstUI	CGCG	1 cut(s)	19
BstV1I	GCAGC	4 cut(s)	814, 1561, 1702, 1900
BstX2I	RGATCY	1 cut(s)	1586
BstYI	RGATCY	1 cut(s)	1586
Bsu15I	ATCGAT	1 cut(s)	243
BsuRI	GGCC	3 cut(s)	132, 303, 1937
BsuTUI	ATCGAT	1 cut(s)	243
BtgI	CCRYGG	2 cut(s)	376, 1158
BtsCI	GGATG	9 cut(s)	61, 87, 99, 541, 1306, 1337, 1789, 1820, 1951
BtsI	GCAGTG	1 cut(s)	944
BtsIMutI	CAGTG	2 cut(s)	328, 944
Cac8I	GCNNGC	4 cut(s)	54, 417, 935, 1650
CfoI	GCGC	2 cut(s)	19, 160
Cfr13I	GGNCC	1 cut(s)	1010
ClaI	ATCGAT	1 cut(s)	243
CseI	GACGC	1 cut(s)	1323
Csp6I	GTAC	6 cut(s)	386, 591, 1365, 1435, 1817, 1995
CspCI	CAANNNNNGTGG	4 cut(s)	109, 144, 393, 428
CviQI	GTAC	6 cut(s)	386, 591, 1365, 1435, 1817, 1995
DdeI	CTNAG	8 cut(s)	254, 393, 990, 1179, 1545, 1590, 1644, 1756
EaeI	YGGCCR	1 cut(s)	130
Eam1104I	CTCTTC	2 cut(s)	221, 1407
EarI	CTCTTC	2 cut(s)	221, 1407
Eco130I	CCWWGG	4 cut(s)	376, 749, 1793, 1998
Eco24I	GRGCYC	1 cut(s)	1214
Eco31I	GGTCTC	2 cut(s)	257, 1175
Eco32I	GATATC	1 cut(s)	294
Eco47I	GGWCC	1 cut(s)	1010
Eco57I	CTGAAG	1 cut(s)	1386
Eco91I	GGTNACC	1 cut(s)	892
EcoNI	CCTNNNNNAGG	1 cut(s)	1080
EcoO109I	RGGNCCY	1 cut(s)	1010
EcoO65I	GGTNACC	1 cut(s)	892
EcoRII	CCWGG	5 cut(s)	419, 831, 1308, 1324, 1760
EcoRV	GATATC	1 cut(s)	294
EcoT14I	CCWWGG	4 cut(s)	376, 749, 1793, 1998
EcoT22I	ATGCAT	1 cut(s)	439
EcoT38I	GRGCYC	1 cut(s)	1214
ErhI	CCWWGG	4 cut(s)	376, 749, 1793, 1998
Esp3I	CGTCTC	2 cut(s)	1484, 1749
FalI	AAGNNNNNCTT	2 cut(s)	176, 208
FaqI	GGGAC	2 cut(s)	867, 1608
Fnu4HI	GCNGC	5 cut(s)	569, 803, 1550, 1716, 1914
FokI	GGATG	9 cut(s)	48, 94, 106, 548, 1313, 1324, 1776, 1807, 1938
FriOI	GRGCYC	1 cut(s)	1214
Fsp4HI	GCNGC	5 cut(s)	569, 803, 1550, 1716, 1914
FspBI	CTAG	8 cut(s)	53, 339, 512, 726, 1005, 1185, 1425, 1598
GlaI	GCGC	2 cut(s)	18, 159
GluI	GCNGC	5 cut(s)	569, 803, 1550, 1716, 1914
GsuI	CTGGAG	1 cut(s)	450
HaeIII	GGCC	3 cut(s)	132, 303, 1937
HgaI	GACGC	1 cut(s)	1323
HhaI	GCGC	2 cut(s)	19, 160
Hin6I	GCGC	2 cut(s)	17, 158
HinP1I	GCGC	2 cut(s)	17, 158
HincII	GTYRAC	2 cut(s)	1069, 1104
HindII	GTYRAC	2 cut(s)	1069, 1104
HindIII	AAGCTT	1 cut(s)	1131
HinfI	GANTC	9 cut(s)	71, 424, 539, 554, 998, 1268, 1739, 1754, 1798
HpaI	GTTAAC	1 cut(s)	1069
HphI	GGTGA	7 cut(s)	450, 490, 904, 908, 1028, 1151, 1368
Hpy166II	GTNNAC	4 cut(s)	1069, 1104, 1437, 1965
Hpy8I	GTNNAC	4 cut(s)	1069, 1104, 1437, 1965
HpyAV	CCTTC	5 cut(s)	32, 293, 1328, 1405, 1577
HpyCH4III	ACNGT	5 cut(s)	674, 982, 1101, 1676, 1876
HpyCH4IV	ACGT	1 cut(s)	686
HpyF10VI	GCNNNNNNNGC	7 cut(s)	344, 416, 449, 469, 934, 1658, 1919
HpyF3I	CTNAG	8 cut(s)	254, 393, 990, 1179, 1545, 1590, 1644, 1756
HpySE526I	ACGT	1 cut(s)	686
HspAI	GCGC	2 cut(s)	17, 158
KspAI	GTTAAC	1 cut(s)	1069
LmnI	GCTCC	3 cut(s)	449, 1209, 1421
Lsp1109I	GCAGC	4 cut(s)	814, 1561, 1702, 1900
LweI	GCATC	5 cut(s)	424, 580, 659, 1118, 1291
MaeI	CTAG	8 cut(s)	53, 339, 512, 726, 1005, 1185, 1425, 1598
MaeII	ACGT	1 cut(s)	686
MaeIII	GTNAC	6 cut(s)	214, 664, 674, 892, 1223, 1374
MboII	GAAGA	8 cut(s)	238, 741, 1007, 1247, 1313, 1424, 1493, 1903
MfeI	CAATTG	1 cut(s)	169
MflI	RGATCY	1 cut(s)	1586
MhlI	GDGCHC	2 cut(s)	1214, 1499
MlsI	TGGCCA	1 cut(s)	132
MluNI	TGGCCA	1 cut(s)	132
MlyI	GAGTC	3 cut(s)	418, 1748, 1748
MmeI	TCCRAC	2 cut(s)	660, 1595
Mox20I	TGGCCA	1 cut(s)	132
Mph1103I	ATGCAT	1 cut(s)	439
MroXI	GAANNNNTTC	3 cut(s)	704, 815, 1946
MscI	TGGCCA	1 cut(s)	132
MseI	TTAA	7 cut(s)	180, 627, 1068, 1190, 1620, 1727, 2007
MslI	CAYNNNNRTG	4 cut(s)	33, 171, 432, 1956
Msp20I	TGGCCA	1 cut(s)	132
MspR9I	CCNGG	5 cut(s)	421, 833, 1310, 1326, 1762
MunI	CAATTG	1 cut(s)	169
Mva1269I	GAATGC	1 cut(s)	187
MvaI	CCWGG	5 cut(s)	421, 833, 1310, 1326, 1762
MvnI	CGCG	1 cut(s)	19
MwoI	GCNNNNNNNGC	7 cut(s)	344, 416, 449, 469, 934, 1658, 1919
NcoI	CCATGG	1 cut(s)	376
NheI	GCTAGC	1 cut(s)	52
NlaIV	GGNNCC	3 cut(s)	451, 1211, 1704
NmuCI	GTSAC	3 cut(s)	664, 892, 1374
NsiI	ATGCAT	1 cut(s)	439
NspI	RCATGY	2 cut(s)	665, 1358
NspV	TTCGAA	2 cut(s)	1562, 1865
OliI	CACNNNNGTG	1 cut(s)	171
PciI	ACATGT	1 cut(s)	661
PcsI	WCGNNNNNNNCGW	1 cut(s)	16
PctI	GAATGC	1 cut(s)	187
PdmI	GAANNNNTTC	3 cut(s)	704, 815, 1946
PfeI	GAWTC	6 cut(s)	71, 539, 554, 998, 1268, 1798
PflMI	CCANNNNNTGG	1 cut(s)	1516
PfoI	TCCNGGA	2 cut(s)	831, 1308
PkrI	GCNGC	5 cut(s)	570, 804, 1551, 1717, 1915
Ple19I	CGATCG	1 cut(s)	23
PleI	GAGTC	3 cut(s)	418, 1747, 1748
PpsI	GAGTC	3 cut(s)	418, 1747, 1748
PpuMI	RGGWCCY	1 cut(s)	1010
PscI	ACATGT	1 cut(s)	661
PshAI	GACNNNNGTC	1 cut(s)	1167
PshBI	ATTAAT	1 cut(s)	627
Psp5II	RGGWCCY	1 cut(s)	1010
Psp6I	CCWGG	5 cut(s)	419, 831, 1308, 1324, 1760
PspEI	GGTNACC	1 cut(s)	892
PspGI	CCWGG	5 cut(s)	419, 831, 1308, 1324, 1760
PspN4I	GGNNCC	3 cut(s)	451, 1211, 1704
PspPI	GGNCC	1 cut(s)	1010
PspPPI	RGGWCCY	1 cut(s)	1010
PstI	CTGCAG	1 cut(s)	939
PsuI	RGATCY	1 cut(s)	1586
PvuI	CGATCG	1 cut(s)	23
RsaI	GTAC	6 cut(s)	387, 592, 1366, 1436, 1818, 1996
RsaNI	GTAC	6 cut(s)	386, 591, 1365, 1435, 1817, 1995
RseI	CAYNNNNRTG	4 cut(s)	33, 171, 432, 1956
SaqAI	TTAA	7 cut(s)	180, 627, 1068, 1190, 1620, 1727, 2007
SatI	GCNGC	5 cut(s)	569, 803, 1550, 1716, 1914
Sau96I	GGNCC	1 cut(s)	1010
ScaI	AGTACT	1 cut(s)	387
SchI	GAGTC	3 cut(s)	418, 1748, 1748
ScrFI	CCNGG	5 cut(s)	421, 833, 1310, 1326, 1762
SduI	GDGCHC	2 cut(s)	1214, 1499
SfaNI	GCATC	5 cut(s)	424, 580, 659, 1118, 1291
SfcI	CTRYAG	2 cut(s)	935, 1215
SfuI	TTCGAA	2 cut(s)	1562, 1865
SinI	GGWCC	1 cut(s)	1010
SmiMI	CAYNNNNRTG	4 cut(s)	33, 171, 432, 1956
SmlI	CTYRAG	1 cut(s)	1628
SmoI	CTYRAG	1 cut(s)	1628
SsiI	CCGC	3 cut(s)	461, 569, 1523
SspMI	CTAG	8 cut(s)	53, 339, 512, 726, 1005, 1185, 1425, 1598
StyD4I	CCNGG	5 cut(s)	419, 831, 1308, 1324, 1760
StyI	CCWWGG	4 cut(s)	376, 749, 1793, 1998
TaaI	ACNGT	5 cut(s)	674, 982, 1101, 1676, 1876
TaiI	ACGT	1 cut(s)	689
TaqI	TCGA	8 cut(s)	243, 708, 1251, 1266, 1387, 1562, 1771, 1865
TaqII	GACCGA	1 cut(s)	911
TatI	WGTACW	2 cut(s)	385, 1434
TauI	GCSGC	1 cut(s)	571
TfiI	GAWTC	6 cut(s)	71, 539, 554, 998, 1268, 1798
Tru1I	TTAA	7 cut(s)	180, 627, 1068, 1190, 1620, 1727, 2007
Tru9I	TTAA	7 cut(s)	180, 627, 1068, 1190, 1620, 1727, 2007
TscAI	CASTG	2 cut(s)	328, 944
TseFI	GTSAC	3 cut(s)	664, 892, 1374
TseI	GCWGC	4 cut(s)	802, 1549, 1715, 1913
Tsp45I	GTSAC	3 cut(s)	664, 892, 1374
TspDTI	ATGAA	4 cut(s)	552, 732, 1260, 1955
TspGWI	ACGGA	2 cut(s)	1175, 1242
TspRI	CASTG	2 cut(s)	328, 944
Van91I	CCANNNNNTGG	1 cut(s)	1516
VpaK11BI	GGWCC	1 cut(s)	1010
VspI	ATTAAT	1 cut(s)	627
XagI	CCTNNNNNAGG	1 cut(s)	1080
XapI	RAATTY	4 cut(s)	364, 811, 826, 1558
XbaI	TCTAGA	2 cut(s)	725, 1004
XceI	RCATGY	2 cut(s)	665, 1358
XmnI	GAANNNNTTC	3 cut(s)	704, 815, 1946
XspI	CTAG	8 cut(s)	53, 339, 512, 726, 1005, 1185, 1425, 1598
ZrmI	AGTACT	1 cut(s)	387
Zsp2I	ATGCAT	1 cut(s)	439

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.