Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0003600

Physical Location & Seq

Genomic Coordinates Reverse (-)

51565699 .. 51569881

Gene Structure 4183 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00203080.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2100 bp

ATGTCTGATTGCGTGGTTCGATCATATCCCGAGAGTGAAGGAACAAATGAGCAAACTTGTGACTCTGTTTGGATGGCTCATTGGATGTGCACAAGCTGCAATTCAGAAACCAAGGCATGTGGTCATGTATCAATTCATTATGAGGAAGCCCGGAAACAGAATGATGGTGTTCAGAAGCATCCGTTGTTTCGAGGATTTGGAGAAGTAGCTGAACCTAAAAGAGTGAGGAAAAACAATGCGGGTGTCACTCTGACAGAGAGTTCAAAGAAACTAAGGGAGGAGAGATTGGAAGGCCAGTCCTTTCCAATGTTCAATGTTCCTCCGAAAACTAGTTTGGCTAAACAGAATCAGCAAGATTCGACTGTCAATAGGAGATTACTAAGTGAAGGTAACTCATCTGCAATGCTGCGATGGGCGCCTGCTGATGCGCGGCCTCTGGAAGCTATCCCACCCCTAAAAGAACAACAGTTGAAATATCATAATTTTCTCAAGGACAGCAGCCCAGCTGTTTCCAAGTCTTTTCAGGATGGACCGGTGAGATTAGATTCTAAACTTGCACTGCATCAATTTAAGTGTGGGAGCACTTCTATGCCATTCTTCATTTGTAGAGACAGGGAAGTTAATCAATCCAACTCTCTTTTAGCACCTCAGCATGTTGCAAACACTAATAATTACTCAAGTTCCACATTTTTGATTCATGAGGAGAATGTCAATAGCAAGTTGTCGTCTAGAAAATCAGGAGGTTCAGTTTCAAGGCAGAATGATGTGATGCTGTTGCCACGTGATCCTTCAACATCCCGTAAGCATGTCCAGGAAATCCAAAGTAAGTCTGGAGTTGGATTGTTTCCAAGCCAGAGTTCTTCCTCAGAGGTGACCAGACGTGAAAAACCATATCTTGGATTTTATTCAGCCCCAATCCTGCAAGATGCTGATCGTAACACAGAGACCATGAGAATATGTACTGCTGCTGATGTTGAGAAAAAATCTTCTACAGGTTATCCCAAGTGTTCTCAGACAACCACTTTTCCAAGAAAGACTGGTTTTAACTCGTCTGAAGGAGGTCACATGTTTGGAGAGACAACCGTATCAACAAAATTGAAAGGAAAAGCTTTTTGTGAGCTCCTTGTTTCCCCAGAGCATGCTTTCCCTGTTCAGACTGGATTGAGATTGCTACCATACAGGAGCTCTACAGACAGCGAAGAGGAAGATGTAAGAGATGTTAAGCGTCCTGCAAATAGTTTGGATAATGAGTCATCATCTGAAACTGATACCATGGACATGGATGCCTTCCAGTTCCAGGATAACCTTCCTCTTGGTGTGGCTTCATCCCCAACAAATGAGCATACTGAGGGGGGCCAGAAGTCACCAACATCTCGGTCTGCCTTTACTTCAGCTAGAGAAGAGGTCAGAGGTAGACCTCCATTCACCAAATTACCTGATATGAACCAAGAGCTTCCAGCTCTTGCAAGTTTAGTGGATGAAAGAGAGACGAGCCCTTCAAGAACCCAAAGTTTGGACGTGGAACATCTCCTTTCCCATGCTGAGCCGACAAATTCAAAATCCAGTGCAAGTCCAGATGGCCCTCAGGGAATAGAGCCAACCTGCAGGTGGGTTAAACGCCTCAAGTTGAGTGCTTCTCACTTTGCTTATGGTACAAAAAGCACAAAAATGGGAGAGGCTTCTTCCCATGAAAAAGTTAGCGCACTTTATAAGAAAAATATGAAATGCAGTGCAACTAATTCACAGCCTGCTATGGGCAGATTTCATAGTAGGGAACAGATGTCAGTAGATGAAACTCCAATGTTATTAAGGAATGGTGAGTCGTCTTCCAGTGATTCAGCAAGGACAAGTCAAAATATATCACTCTCACATCCTTGGATTAGGAGGTGGTCCCACAAAGTAGTTGCACCCAACAAGAATTCTGAAGCTGCGGCGGTTTCTCGACCTCAAAGTTCGAAGGCAACATTTGATCAATTTCAGAAAAAAAGGTTTCCAAGCATTGCTGCTATGGCACTCATGGGGAAGGCCATGAATGGTTTCAATCCATGTGAGTTTGCGAAAAAGGGGTCTTTTGTGGTTTGGAATGCGAAGGGATTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006996 GO:0007610 GO:0007622 GO:0007623 GO:0008150 GO:0009628 GO:0009657 GO:0009658 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048511 GO:0048512 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071840 GO:0080090 GO:0080167 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

699

Amino Acids

77.43

Weight (kDa)

9.01

Isoelectric Point (pI)

62.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003600)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16290 AT2G16300 AT2G16365 AT2G16365 AT2G16365 AT2G16365 AT2G16365 AT2G16365 AT4G34550 AT4G34550
fragaria_vesca	FvH4_2g09190 FvH4_2g09190 FvH4_2g09190 FvH4_2g09190
malus_domestica	MD05G1064100.v1.1 MD10G1072800.v1.1
prunus_persica	Prupe.8G094200_v2.0.a1 Prupe.8G094200_v2.0.a1 Prupe.8G094200_v2.0.a1
pyrus_communis	pycom05g05530 pycom10g05750
rosa_chinensis	RchiOBHm_Chr6g0265031
rosa_laevigata	RLG00000014214
rosa_multiflora	Rmu_sc0002934.1_g000016 Rmu_sc0011803.1_g000002 Rmu_sc0042979.1_g000001
rosa_roxburghii	Rroxscaffold_175G00432110 Rroxscaffold_7G00203080
rosa_rugosa	Rorug06G0013500 Rorug06G0013600
rosa_samantha	Rh6AG136300 Rh6BG133200 Rh6CG131700 Rh6DG119000
rosa_wichuraiana	Rw6G011760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1710
AarI	CACCTGC	1 cut(s)	1596
Acc36I	ACCTGC	2 cut(s)	1596, 1610
AccB1I	GGYRCC	1 cut(s)	415
AccB7I	CCANNNNNTGG	2 cut(s)	896, 1513
AccI	GTMKAC	1 cut(s)	1414
AccII	CGCG	1 cut(s)	430
AciI	CCGC	4 cut(s)	239, 430, 1931, 1934
AclWI	GGATC	1 cut(s)	779
AcsI	RAATTY	2 cut(s)	1552, 1918
AcuI	CTGAAG	3 cut(s)	1074, 1374, 1944
AcvI	CACGTG	1 cut(s)	782
AcyI	GRCGYC	1 cut(s)	416
AfaI	GTAC	2 cut(s)	961, 1654
AfiI	CCNNNNNNNGG	5 cut(s)	896, 1297, 1513, 1608, 1754
AflIII	ACRYGT	1 cut(s)	1065
AgeI	ACCGGT	1 cut(s)	532
AgsI	TTSAA	9 cut(s)	264, 313, 472, 753, 792, 1099, 1500, 1557, 2041
AhlI	ACTAGT	1 cut(s)	329
AjiI	CACGTC	2 cut(s)	881, 1519
AjnI	CCWGG	2 cut(s)	810, 1296
AjuI	GAANNNNNNNTTGG	4 cut(s)	317, 349, 841, 873
Alw21I	GWGCWC	4 cut(s)	92, 584, 1122, 1187
Alw26I	GTCTC	4 cut(s)	603, 938, 1070, 1481
Alw44I	GTGCAC	1 cut(s)	88
AlwI	GGATC	1 cut(s)	779
Ama87I	CYCGRG	1 cut(s)	29
AoxI	GGCC	5 cut(s)	292, 431, 1354, 1579, 2025
ApaLI	GTGCAC	1 cut(s)	88
ApeKI	GCWGC	6 cut(s)	96, 406, 498, 965, 1928, 2003
ApoI	RAATTY	2 cut(s)	1552, 1918
ArsI	GACNNNNNNTTYG	2 cut(s)	2051, 2083
AsiGI	ACCGGT	1 cut(s)	532
Asp700I	GAANNNNTTC	1 cut(s)	2036
AspLEI	GCGC	3 cut(s)	418, 430, 1703
AspS9I	GGNCC	4 cut(s)	530, 1354, 1580, 1890
AsuC2I	CCSGG	1 cut(s)	151
AsuHPI	GGTGA	5 cut(s)	547, 883, 1356, 1417, 1829
AsuII	TTCGAA	1 cut(s)	1955
AvaI	CYCGRG	1 cut(s)	29
AvaII	GGWCC	2 cut(s)	530, 1890
AxyI	CCTNAGG	1 cut(s)	1584
BaeGI	GKGCMC	1 cut(s)	92
BaeI	ACNNNNGTAYC	2 cut(s)	1068, 1101
BanI	GGYRCC	1 cut(s)	415
BanII	GRGCYC	3 cut(s)	1122, 1187, 1496
BbrPI	CACGTG	1 cut(s)	782
BbsI	GAAGAC	1 cut(s)	1818
Bbv12I	GWGCWC	4 cut(s)	92, 584, 1122, 1187
BbvCI	CCTCAGC	1 cut(s)	648
BbvI	GCAGC	6 cut(s)	83, 393, 510, 952, 1915, 1990
BccI	CCATC	5 cut(s)	67, 158, 405, 521, 1571
BciT130I	CCWGG	2 cut(s)	812, 1298
BclI	TGATCA	1 cut(s)	1969
BcnI	CCSGG	1 cut(s)	151
BcoDI	GTCTC	4 cut(s)	603, 938, 1070, 1481
BcuI	ACTAGT	1 cut(s)	329
BfaI	CTAG	3 cut(s)	330, 729, 1395
BfmI	CTRYAG	3 cut(s)	990, 1188, 1603
BfoI	RGCGCY	1 cut(s)	419
BfuAI	ACCTGC	2 cut(s)	1596, 1610
BisI	GCNGC	8 cut(s)	97, 407, 431, 499, 966, 1929, 1932, 2004
BlpI	GCTNAGC	1 cut(s)	1542
BlsI	GCNGC	8 cut(s)	98, 408, 432, 500, 967, 1930, 1933, 2005
Bme1390I	CCNGG	3 cut(s)	151, 812, 1298
Bme18I	GGWCC	2 cut(s)	530, 1890
BmeT110I	CYCGRG	1 cut(s)	29
BmgBI	CACGTC	2 cut(s)	881, 1519
BmgT120I	GGNCC	4 cut(s)	530, 1354, 1580, 1890
BmiI	GGNNCC	3 cut(s)	417, 1355, 1892
BmrFI	CCNGG	3 cut(s)	151, 812, 1298
BmsI	GCATC	6 cut(s)	187, 415, 571, 759, 916, 1273
BpiI	GAAGAC	1 cut(s)	1818
BplI	GAGNNNNNCTC	2 cut(s)	1621, 1653
BpmI	CTGGAG	1 cut(s)	852
Bpu10I	CCTNAGC	1 cut(s)	648
Bpu1102I	GCTNAGC	1 cut(s)	1542
Bpu14I	TTCGAA	1 cut(s)	1955
BpuEI	CTTGAG	3 cut(s)	473, 661, 1607
BpuMI	CCSGG	1 cut(s)	151
BsaAI	YACGTR	1 cut(s)	782
BsaBI	GATNNNNATC	1 cut(s)	930
BsaHI	GRCGYC	1 cut(s)	416
BsaI	GGTCTC	1 cut(s)	938
BsaJI	CCNNGG	3 cut(s)	111, 1272, 1874
BsaWI	WCCGGW	1 cut(s)	532
BsaXI	ACNNNNNCTCC	2 cut(s)	732, 762
Bsc4I	CCNNNNNNNGG	5 cut(s)	896, 1297, 1513, 1608, 1754
Bse118I	RCCGGY	1 cut(s)	532
Bse1I	ACTGG	6 cut(s)	295, 1042, 1162, 1291, 1563, 1830
Bse21I	CCTNAGG	1 cut(s)	1584
Bse3DI	GCAATG	2 cut(s)	408, 1998
Bse8I	GATNNNNATC	1 cut(s)	930
BseBI	CCWGG	2 cut(s)	812, 1298
BseDI	CCNNGG	3 cut(s)	111, 1272, 1874
BseGI	GGATG	9 cut(s)	78, 90, 178, 532, 794, 1288, 1325, 1483, 1870
BseJI	GATNNNNATC	1 cut(s)	930
BseLI	CCNNNNNNNGG	5 cut(s)	896, 1297, 1513, 1608, 1754
BseMI	GCAATG	2 cut(s)	408, 1998
BseMII	CTCAG	6 cut(s)	662, 879, 1025, 1338, 1533, 1598
BseNI	ACTGG	6 cut(s)	295, 1042, 1162, 1291, 1563, 1830
BseRI	GAGGAG	2 cut(s)	293, 716
BseSI	GKGCMC	1 cut(s)	92
BseXI	GCAGC	6 cut(s)	83, 393, 510, 952, 1915, 1990
BseYI	CCCAGC	1 cut(s)	502
Bsh1236I	CGCG	1 cut(s)	430
BshFI	GGCC	5 cut(s)	294, 433, 1356, 1581, 2027
BshNI	GGYRCC	1 cut(s)	415
BshTI	ACCGGT	1 cut(s)	532
BsiHKAI	GWGCWC	4 cut(s)	92, 584, 1122, 1187
BsiHKCI	CYCGRG	1 cut(s)	29
BsiSI	CCGG	2 cut(s)	151, 533
BslFI	GGGAC	1 cut(s)	1876
BslI	CCNNNNNNNGG	5 cut(s)	896, 1297, 1513, 1608, 1754
BsmAI	GTCTC	4 cut(s)	603, 938, 1070, 1481
BsmBI	CGTCTC	1 cut(s)	1481
BsmFI	GGGAC	1 cut(s)	1876
BsmI	GAATGC	1 cut(s)	2089
BsnI	GGCC	5 cut(s)	294, 433, 1356, 1581, 2027
Bso31I	GGTCTC	1 cut(s)	938
BsoBI	CYCGRG	1 cut(s)	29
Bsp119I	TTCGAA	1 cut(s)	1955
Bsp1286I	GDGCHC	5 cut(s)	92, 584, 1122, 1187, 1496
Bsp143I	GATC	4 cut(s)	20, 784, 931, 1969
Bsp1720I	GCTNAGC	1 cut(s)	1542
Bsp19I	CCATGG	1 cut(s)	1272
BspACI	CCGC	4 cut(s)	239, 430, 1931, 1934
BspANI	GGCC	5 cut(s)	294, 433, 1356, 1581, 2027
BspCNI	CTCAG	6 cut(s)	661, 878, 1024, 1339, 1534, 1597
BspFNI	CGCG	1 cut(s)	430
BspHI	TCATGA	1 cut(s)	697
BspLI	GGNNCC	3 cut(s)	417, 1355, 1892
BspMAI	CTGCAG	1 cut(s)	1607
BspMI	ACCTGC	2 cut(s)	1596, 1610
BspPI	GGATC	1 cut(s)	779
BspT104I	TTCGAA	1 cut(s)	1955
BspT107I	GGYRCC	1 cut(s)	415
BspTNI	GGTCTC	1 cut(s)	938
BsrDI	GCAATG	2 cut(s)	408, 1998
BsrFI	RCCGGY	1 cut(s)	532
BsrI	ACTGG	6 cut(s)	295, 1042, 1162, 1291, 1563, 1830
BssAI	RCCGGY	1 cut(s)	532
BssECI	CCNNGG	3 cut(s)	111, 1272, 1874
BssMI	GATC	4 cut(s)	20, 784, 931, 1969
BssNI	GRCGYC	1 cut(s)	416
BssT1I	CCWWGG	3 cut(s)	111, 1272, 1874
Bst2UI	CCWGG	2 cut(s)	812, 1298
Bst4CI	ACNGT	3 cut(s)	364, 468, 1084
Bst6I	CTCTTC	2 cut(s)	1194, 1395
BstACI	GRCGYC	1 cut(s)	416
BstAPI	GCANNNNNTGC	1 cut(s)	96
BstBAI	YACGTR	1 cut(s)	782
BstBI	TTCGAA	1 cut(s)	1955
BstC8I	GCNNGC	3 cut(s)	420, 1140, 1749
BstDEI	CTNAG	8 cut(s)	272, 380, 648, 865, 1011, 1347, 1542, 1584
BstDSI	CCRYGG	1 cut(s)	1272
BstEII	GGTNACC	1 cut(s)	871
BstF5I	GGATG	9 cut(s)	78, 90, 178, 532, 794, 1288, 1325, 1483, 1870
BstFNI	CGCG	1 cut(s)	430
BstH2I	RGCGCY	1 cut(s)	419
BstHHI	GCGC	3 cut(s)	418, 430, 1703
BstKTI	GATC	4 cut(s)	23, 787, 934, 1972
BstMAI	GTCTC	4 cut(s)	603, 938, 1070, 1481
BstMBI	GATC	4 cut(s)	20, 784, 931, 1969
BstMWI	GCNNNNNNNGC	3 cut(s)	96, 415, 2009
BstNI	CCWGG	2 cut(s)	812, 1298
BstNSI	RCATGY	5 cut(s)	120, 656, 809, 1069, 1142
BstPI	GGTNACC	1 cut(s)	871
BstSCI	CCNGG	3 cut(s)	149, 810, 1296
BstSFI	CTRYAG	3 cut(s)	990, 1188, 1603
BstSLI	GKGCMC	1 cut(s)	92
BstUI	CGCG	1 cut(s)	430
BstV1I	GCAGC	6 cut(s)	83, 393, 510, 952, 1915, 1990
BstV2I	GAAGAC	1 cut(s)	1818
BstXI	CCANNNNNNTGG	1 cut(s)	1279
Bsu36I	CCTNAGG	1 cut(s)	1584
BsuRI	GGCC	5 cut(s)	294, 433, 1356, 1581, 2027
BtgI	CCRYGG	1 cut(s)	1272
BtgZI	GCGATG	1 cut(s)	424
BtrI	CACGTC	2 cut(s)	881, 1519
BtsCI	GGATG	9 cut(s)	78, 90, 178, 532, 794, 1288, 1325, 1483, 1870
BtsI	GCAGTG	2 cut(s)	557, 1735
BtsIMutI	CAGTG	4 cut(s)	557, 1570, 1735, 1837
BveI	ACCTGC	2 cut(s)	1596, 1610
Cac8I	GCNNGC	3 cut(s)	420, 1140, 1749
CciI	TCATGA	1 cut(s)	697
CfoI	GCGC	3 cut(s)	418, 430, 1703
Cfr10I	RCCGGY	1 cut(s)	532
Cfr13I	GGNCC	4 cut(s)	530, 1354, 1580, 1890
CseI	GACGC	1 cut(s)	1214
Csp6I	GTAC	2 cut(s)	960, 1653
CspAI	ACCGGT	1 cut(s)	532
CspCI	CAANNNNNGTGG	4 cut(s)	100, 135, 1455, 1490
CviQI	GTAC	2 cut(s)	960, 1653
DdeI	CTNAG	8 cut(s)	272, 380, 648, 865, 1011, 1347, 1542, 1584
DinI	GGCGCC	1 cut(s)	417
DpnI	GATC	4 cut(s)	22, 786, 933, 1971
DpnII	GATC	4 cut(s)	20, 784, 931, 1969
Eam1104I	CTCTTC	2 cut(s)	1194, 1395
EarI	CTCTTC	2 cut(s)	1194, 1395
Ecl136II	GAGCTC	2 cut(s)	1120, 1185
Eco130I	CCWWGG	3 cut(s)	111, 1272, 1874
Eco24I	GRGCYC	3 cut(s)	1122, 1187, 1496
Eco31I	GGTCTC	1 cut(s)	938
Eco47I	GGWCC	2 cut(s)	530, 1890
Eco53kI	GAGCTC	2 cut(s)	1120, 1185
Eco57I	CTGAAG	3 cut(s)	1074, 1374, 1944
Eco72I	CACGTG	1 cut(s)	782
Eco81I	CCTNAGG	1 cut(s)	1584
Eco88I	CYCGRG	1 cut(s)	29
Eco91I	GGTNACC	1 cut(s)	871
EcoICRI	GAGCTC	2 cut(s)	1120, 1185
EcoO65I	GGTNACC	1 cut(s)	871
EcoRI	GAATTC	1 cut(s)	1918
EcoRII	CCWGG	2 cut(s)	810, 1296
EcoT14I	CCWWGG	3 cut(s)	111, 1272, 1874
EcoT38I	GRGCYC	3 cut(s)	1122, 1187, 1496
EgeI	GGCGCC	1 cut(s)	417
EheI	GGCGCC	1 cut(s)	417
ErhI	CCWWGG	3 cut(s)	111, 1272, 1874
Esp3I	CGTCTC	1 cut(s)	1481
FaqI	GGGAC	1 cut(s)	1876
FauI	CCCGC	1 cut(s)	232
FbaI	TGATCA	1 cut(s)	1969
FblI	GTMKAC	1 cut(s)	1414
Fnu4HI	GCNGC	8 cut(s)	97, 407, 431, 499, 966, 1929, 1932, 2004
FokI	GGATG	9 cut(s)	85, 97, 165, 539, 781, 1295, 1312, 1490, 1857
FriOI	GRGCYC	3 cut(s)	1122, 1187, 1496
Fsp4HI	GCNGC	8 cut(s)	97, 407, 431, 499, 966, 1929, 1932, 2004
FspBI	CTAG	3 cut(s)	330, 729, 1395
GlaI	GCGC	3 cut(s)	417, 429, 1702
GluI	GCNGC	8 cut(s)	97, 407, 431, 499, 966, 1929, 1932, 2004
GsaI	CCCAGC	1 cut(s)	506
GsuI	CTGGAG	1 cut(s)	852
HaeII	RGCGCY	1 cut(s)	419
HaeIII	GGCC	5 cut(s)	294, 433, 1356, 1581, 2027
HapII	CCGG	2 cut(s)	151, 533
HgaI	GACGC	1 cut(s)	1214
HhaI	GCGC	3 cut(s)	418, 430, 1703
Hin1I	GRCGYC	1 cut(s)	416
Hin6I	GCGC	3 cut(s)	416, 428, 1701
HinP1I	GCGC	3 cut(s)	416, 428, 1701
HindIII	AAGCTT	1 cut(s)	1107
HinfI	GANTC	8 cut(s)	62, 346, 356, 545, 694, 1250, 1820, 1835
HpaII	CCGG	2 cut(s)	151, 533
HphI	GGTGA	5 cut(s)	547, 883, 1356, 1417, 1829
Hpy166II	GTNNAC	2 cut(s)	90, 1415
Hpy8I	GTNNAC	2 cut(s)	90, 1415
HpyCH4III	ACNGT	3 cut(s)	364, 468, 1084
HpyCH4IV	ACGT	3 cut(s)	781, 880, 1518
HpyF10VI	GCNNNNNNNGC	3 cut(s)	96, 415, 2009
HpyF3I	CTNAG	8 cut(s)	272, 380, 648, 865, 1011, 1347, 1542, 1584
HpySE526I	ACGT	3 cut(s)	781, 880, 1518
Hsp92I	GRCGYC	1 cut(s)	416
HspAI	GCGC	3 cut(s)	416, 428, 1701
KasI	GGCGCC	1 cut(s)	415
Ksp22I	TGATCA	1 cut(s)	1969
Kzo9I	GATC	4 cut(s)	20, 784, 931, 1969
LmnI	GCTCC	3 cut(s)	579, 1125, 1182
Lsp1109I	GCAGC	6 cut(s)	83, 393, 510, 952, 1915, 1990
LweI	GCATC	6 cut(s)	187, 415, 571, 759, 916, 1273
MaeI	CTAG	3 cut(s)	330, 729, 1395
MaeII	ACGT	3 cut(s)	781, 880, 1518
MaeIII	GTNAC	7 cut(s)	59, 244, 389, 871, 935, 1061, 1362
MalI	GATC	4 cut(s)	22, 786, 933, 1971
MboI	GATC	4 cut(s)	20, 784, 931, 1969
MboII	GAAGA	8 cut(s)	589, 852, 978, 1211, 1217, 1412, 1674, 1818
MhlI	GDGCHC	5 cut(s)	92, 584, 1122, 1187, 1496
Mly113I	GGCGCC	1 cut(s)	416
MlyI	GAGTC	3 cut(s)	56, 1259, 1829
MmeI	TCCRAC	2 cut(s)	654, 817
MroXI	GAANNNNTTC	1 cut(s)	2036
MseI	TTAA	7 cut(s)	570, 621, 1044, 1221, 1614, 1808, 2098
MslI	CAYNNNNRTG	3 cut(s)	587, 1277, 1667
MspA1I	CMGCKG	1 cut(s)	506
MspI	CCGG	2 cut(s)	151, 533
MspR9I	CCNGG	3 cut(s)	151, 812, 1298
Mva1269I	GAATGC	1 cut(s)	2089
MvaI	CCWGG	2 cut(s)	812, 1298
MvnI	CGCG	1 cut(s)	430
MwoI	GCNNNNNNNGC	3 cut(s)	96, 415, 2009
NarI	GGCGCC	1 cut(s)	416
NciI	CCSGG	1 cut(s)	151
NcoI	CCATGG	1 cut(s)	1272
NdeII	GATC	4 cut(s)	20, 784, 931, 1969
NlaIV	GGNNCC	3 cut(s)	417, 1355, 1892
NmuCI	GTSAC	5 cut(s)	59, 244, 871, 1061, 1362
NspI	RCATGY	5 cut(s)	120, 656, 809, 1069, 1142
NspV	TTCGAA	1 cut(s)	1955
PaeI	GCATGC	1 cut(s)	1142
PagI	TCATGA	1 cut(s)	697
PaqCI	CACCTGC	1 cut(s)	1596
PciI	ACATGT	1 cut(s)	1065
PctI	GAATGC	1 cut(s)	2089
PdmI	GAANNNNTTC	1 cut(s)	2036
PfeI	GAWTC	5 cut(s)	346, 356, 545, 694, 1835
PflMI	CCANNNNNTGG	2 cut(s)	896, 1513
PfoI	TCCNGGA	2 cut(s)	810, 1296
PinAI	ACCGGT	1 cut(s)	532
PkrI	GCNGC	8 cut(s)	98, 408, 432, 500, 967, 1930, 1933, 2005
PleI	GAGTC	3 cut(s)	56, 1258, 1828
PluTI	GGCGCC	1 cut(s)	419
PmaCI	CACGTG	1 cut(s)	782
PmlI	CACGTG	1 cut(s)	782
PpsI	GAGTC	3 cut(s)	56, 1258, 1828
Ppu21I	YACGTR	1 cut(s)	782
PscI	ACATGT	1 cut(s)	1065
PsiI	TTATAA	1 cut(s)	1710
Psp124BI	GAGCTC	2 cut(s)	1122, 1187
Psp6I	CCWGG	2 cut(s)	810, 1296
PspCI	CACGTG	1 cut(s)	782
PspEI	GGTNACC	1 cut(s)	871
PspFI	CCCAGC	1 cut(s)	502
PspGI	CCWGG	2 cut(s)	810, 1296
PspN4I	GGNNCC	3 cut(s)	417, 1355, 1892
PspPI	GGNCC	4 cut(s)	530, 1354, 1580, 1890
PstI	CTGCAG	1 cut(s)	1607
PvuII	CAGCTG	1 cut(s)	506
RsaI	GTAC	2 cut(s)	961, 1654
RsaNI	GTAC	2 cut(s)	960, 1653
RseI	CAYNNNNRTG	3 cut(s)	587, 1277, 1667
SacI	GAGCTC	2 cut(s)	1122, 1187
SaqAI	TTAA	7 cut(s)	570, 621, 1044, 1221, 1614, 1808, 2098
SatI	GCNGC	8 cut(s)	97, 407, 431, 499, 966, 1929, 1932, 2004
Sau3AI	GATC	4 cut(s)	20, 784, 931, 1969
Sau96I	GGNCC	4 cut(s)	530, 1354, 1580, 1890
SbfI	CCTGCAGG	1 cut(s)	1607
SchI	GAGTC	3 cut(s)	56, 1259, 1829
ScrFI	CCNGG	3 cut(s)	151, 812, 1298
SdaI	CCTGCAGG	1 cut(s)	1607
SduI	GDGCHC	5 cut(s)	92, 584, 1122, 1187, 1496
SfaNI	GCATC	6 cut(s)	187, 415, 571, 759, 916, 1273
SfcI	CTRYAG	3 cut(s)	990, 1188, 1603
SfoI	GGCGCC	1 cut(s)	417
SfuI	TTCGAA	1 cut(s)	1955
SinI	GGWCC	2 cut(s)	530, 1890
SmiMI	CAYNNNNRTG	3 cut(s)	587, 1277, 1667
SmlI	CTYRAG	3 cut(s)	488, 676, 1622
SmoI	CTYRAG	3 cut(s)	488, 676, 1622
SpeI	ACTAGT	1 cut(s)	329
SphI	GCATGC	1 cut(s)	1142
Sse8387I	CCTGCAGG	1 cut(s)	1607
SsiI	CCGC	4 cut(s)	239, 430, 1931, 1934
SspDI	GGCGCC	1 cut(s)	415
SspMI	CTAG	3 cut(s)	330, 729, 1395
SstI	GAGCTC	2 cut(s)	1122, 1187
StyD4I	CCNGG	3 cut(s)	149, 810, 1296
StyI	CCWWGG	3 cut(s)	111, 1272, 1874
TaaI	ACNGT	3 cut(s)	364, 468, 1084
TaiI	ACGT	3 cut(s)	784, 883, 1521
TaqI	TCGA	5 cut(s)	19, 190, 359, 1942, 1955
TaqII	GACCGA	1 cut(s)	1365
TatI	WGTACW	1 cut(s)	959
TauI	GCSGC	2 cut(s)	433, 1934
TfiI	GAWTC	5 cut(s)	346, 356, 545, 694, 1835
Tru1I	TTAA	7 cut(s)	570, 621, 1044, 1221, 1614, 1808, 2098
Tru9I	TTAA	7 cut(s)	570, 621, 1044, 1221, 1614, 1808, 2098
TscAI	CASTG	4 cut(s)	564, 1570, 1735, 1837
TseFI	GTSAC	5 cut(s)	59, 244, 871, 1061, 1362
TseI	GCWGC	6 cut(s)	96, 406, 498, 965, 1928, 2003
Tsp45I	GTSAC	5 cut(s)	59, 244, 871, 1061, 1362
TspGWI	ACGGA	1 cut(s)	171
TspRI	CASTG	4 cut(s)	564, 1570, 1735, 1837
Van91I	CCANNNNNTGG	2 cut(s)	896, 1513
VneI	GTGCAC	1 cut(s)	88
VpaK11BI	GGWCC	2 cut(s)	530, 1890
XapI	RAATTY	2 cut(s)	1552, 1918
XbaI	TCTAGA	1 cut(s)	728
XceI	RCATGY	5 cut(s)	120, 656, 809, 1069, 1142
XcmI	CCANNNNNNNNNTGG	2 cut(s)	827, 1605
XmiI	GTMKAC	1 cut(s)	1414
XmnI	GAANNNNTTC	1 cut(s)	2036
XspI	CTAG	3 cut(s)	330, 729, 1395

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.