Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000175

Orthogroup ID

OG0003600

Physical Location & Seq

Genomic Coordinates Forward (+)

400997 .. 405282

Gene Structure 4286 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_175G00432110.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2073 bp

ATGTCTGATTGCGTGGTTCGATCATATCCCGAGAGTGAAGGAACAAATGAGCAAACTTGTGACTCTGTTTGGATGGCTCATTGGATGTGCACAAGCTGCAATTCAGAAACCAAGGCATGTGGTCATGTATCAATTCATTATGAGGAAGCCCGGAAACAGAATGATGGTGTTCAGAAGCATCCGTTGTTTCGAGGATTTGGAGAAGTAGCTGAACCTAAAAGAGTGAGGAAAAACAATGCGGGTGTCACTCTGACAGAGAGTTCAAAGAAACTAAGGGAGGAGAGATTGGTAGGCCAGTCCTTTCCAATGTTCAATGTTCCTCAGAAAACTAGTTTGGCTAAACAGAATCAGCAAGATTCGACTGTCAATAGGAGATTACTAAGTGAGAGTAACTCATCTGCAATGCTGCGATGGGCGCCTGCTGATGTGCGGCCTCTGGAAGCTATCCCACCCCTAAAAGAACAACAGTTGAAATATCATAATTTTCTCAAGGACAGCAGCCCAGCTGTTTCCAAGTCTTTTCAGGATGGACCGGTGAGATTAGATTCTAAACTTGCACTGCATCAATTTAAGTGTGGGAACACTTCTATGCCATTCTTCATTTGTAGAGACAAGGAAGTTAATCAATCCAACTCTCTTTTAGCACCTCAGCATGTTGCAAACACTAATAATTACTCAAGTTCCACATTTTTGATTCATGAGGAGAATATCAATAGCAAGTTGTCGTCTAGAAAATCAGGAGGTTCAGTTTCAAGGCAGAATGATGTGATGCTGTTGCCACGTGATCCTTCAACATCCCGTAAGCATGTCCAGGAAATCCAAAGTAAGTCTGGAGTTGGATTGTTTCCAAGCCAGAGTTCTTCCTCAGAGGTGACCAGACATGAAAAACCATATCTTGGATTTTATTCAGCCCCAATCCTGCAAGATGCTGATCGTAACACAGAGACCATGAGAATATGTGCTGCTGCTGATGTTGAGAAAGAATCTTCTACAGGTTATCCCAAGTGTTCTCAGACAACCACTTTTCCAAGAAAGACTGGTTTTAACTCGTCTGAAGGAGGTCACATGTTTGGAGAGACAACCGTATCAACAAAATTGAAAGGAAAAGCTTTTTGTGAGCTTCTTGTTTCCCCAGAGCATGCTTTCCCTGTTCAGACTGGATTGAGATTGCTACCATACAGGAGCTCTACAGACAGTGAAGAGGAAGATGTAAGAGATGTTAAGCGTCCTGCAAATAGTTTGGATAATGAATCATCATCTGAAACTGATACCATGGACATGGATGCCTTCCAGTTCCAGGATAACCTTCCTCTTGCATACTGGGGGGGCCAGAAGTCACCAACATCTCGATCTGCCTTTACTTCAGCTAGAGAAGAGGTCAGAGGTAGACCTCCATTCACCAAATTACCTGATATGAACCAAGAGCTTCCAGCTCTTGCAAGTTTAGTGGATGAAAGAGAGATGAGCCCTTCAAGAACCCAAAGTTTGGACGTGGAACATCTCCTTTCCCATGCTGAGCCCACAAATTCAAAATCCAGTGCAAGTCCAGATGGCCCTCAGGGAATAGAGCCAACCTGCAGGTGGGTTAAACGCCTCAAGTTGAGTGCTTCTCACTTTGCTTATGGTACAAAAAGCACAAAAATGGGAGAGGCTTCTTCCCATGAAAAAGTTAACGCACTTTATAAGAAAAATATGAAATGCAGTGCAACTAATTCACAGCCTGCTATGGGCAGATTTCATAGTAGGGAAAAGATGTCAGTAGACGAAACTCCAATGTTATTAAGGAATGGTGAGTCGTCTTCTGGTGATTCAGCAAGGACAAGTCAAAATATATCACTCTCACATCCTTGGATTAGGAGGTGGTCCCACAAAGTAGTTGCACCTCACAAGAATTCTGAAGCTGCGGCGGTTTCTCGACCTCAAAGTTCAAAGGCAACATTTGATCAATTTCAGAAAAAAAGGTTTCCAAGCATTGCTGCTATGGCACTCATGGGGAAGGCCATGAATGGTTTCAATCCATGTGAGTTTGCGAAAAAGGGGTCTTTTGTGGTTTGGAATGCGAAGGGATTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006996 GO:0007610 GO:0007622 GO:0007623 GO:0008150 GO:0009628 GO:0009657 GO:0009658 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048511 GO:0048512 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071840 GO:0080090 GO:0080167 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

690

Amino Acids

76.71

Weight (kDa)

9.05

Isoelectric Point (pI)

62.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003600)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16290 AT2G16300 AT2G16365 AT2G16365 AT2G16365 AT2G16365 AT2G16365 AT2G16365 AT4G34550 AT4G34550
fragaria_vesca	FvH4_2g09190 FvH4_2g09190 FvH4_2g09190 FvH4_2g09190
malus_domestica	MD05G1064100.v1.1 MD10G1072800.v1.1
prunus_persica	Prupe.8G094200_v2.0.a1 Prupe.8G094200_v2.0.a1 Prupe.8G094200_v2.0.a1
pyrus_communis	pycom05g05530 pycom10g05750
rosa_chinensis	RchiOBHm_Chr6g0265031
rosa_laevigata	RLG00000014214
rosa_multiflora	Rmu_sc0002934.1_g000016 Rmu_sc0011803.1_g000002 Rmu_sc0042979.1_g000001
rosa_roxburghii	Rroxscaffold_175G00432110 Rroxscaffold_7G00203080
rosa_rugosa	Rorug06G0013500 Rorug06G0013600
rosa_samantha	Rh6AG136300 Rh6BG133200 Rh6CG131700 Rh6DG119000
rosa_wichuraiana	Rw6G011760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1683
AarI	CACCTGC	1 cut(s)	1569
Acc36I	ACCTGC	2 cut(s)	1569, 1583
AccB1I	GGYRCC	1 cut(s)	415
AccB7I	CCANNNNNTGG	2 cut(s)	896, 1486
AccI	GTMKAC	2 cut(s)	1387, 1761
AciI	CCGC	4 cut(s)	239, 430, 1904, 1907
AclWI	GGATC	1 cut(s)	779
AcsI	RAATTY	2 cut(s)	1525, 1891
AcuI	CTGAAG	3 cut(s)	1074, 1347, 1917
AcvI	CACGTG	1 cut(s)	782
AcyI	GRCGYC	1 cut(s)	416
AfaI	GTAC	1 cut(s)	1627
AfiI	CCNNNNNNNGG	5 cut(s)	896, 1297, 1486, 1581, 1727
AflIII	ACRYGT	1 cut(s)	1065
AgeI	ACCGGT	1 cut(s)	532
AhlI	ACTAGT	1 cut(s)	329
AjiI	CACGTC	1 cut(s)	1492
AjnI	CCWGG	2 cut(s)	810, 1296
AjuI	GAANNNNNNNTTGG	4 cut(s)	317, 349, 841, 873
Alw21I	GWGCWC	2 cut(s)	92, 1187
Alw26I	GTCTC	3 cut(s)	603, 938, 1070
Alw44I	GTGCAC	1 cut(s)	88
AlwI	GGATC	1 cut(s)	779
Ama87I	CYCGRG	1 cut(s)	29
AoxI	GGCC	5 cut(s)	292, 431, 1327, 1552, 1998
ApaLI	GTGCAC	1 cut(s)	88
ApeKI	GCWGC	7 cut(s)	96, 406, 498, 962, 965, 1901, 1976
ApoI	RAATTY	2 cut(s)	1525, 1891
ArsI	GACNNNNNNTTYG	2 cut(s)	2024, 2056
AsiGI	ACCGGT	1 cut(s)	532
Asp700I	GAANNNNTTC	1 cut(s)	2009
AspLEI	GCGC	1 cut(s)	418
AspS9I	GGNCC	4 cut(s)	530, 1327, 1553, 1863
AsuC2I	CCSGG	1 cut(s)	151
AsuHPI	GGTGA	6 cut(s)	547, 883, 1329, 1390, 1802, 1817
AvaI	CYCGRG	1 cut(s)	29
AvaII	GGWCC	2 cut(s)	530, 1863
AxyI	CCTNAGG	1 cut(s)	1557
BaeGI	GKGCMC	1 cut(s)	92
BaeI	ACNNNNGTAYC	2 cut(s)	1068, 1101
BanI	GGYRCC	1 cut(s)	415
BanII	GRGCYC	3 cut(s)	1187, 1469, 1521
BbrPI	CACGTG	1 cut(s)	782
BbsI	GAAGAC	1 cut(s)	1791
Bbv12I	GWGCWC	2 cut(s)	92, 1187
BbvCI	CCTCAGC	1 cut(s)	648
BbvI	GCAGC	7 cut(s)	83, 393, 510, 949, 952, 1888, 1963
BccI	CCATC	5 cut(s)	67, 158, 405, 521, 1544
BciT130I	CCWGG	2 cut(s)	812, 1298
BclI	TGATCA	1 cut(s)	1942
BcnI	CCSGG	1 cut(s)	151
BcoDI	GTCTC	3 cut(s)	603, 938, 1070
BcuI	ACTAGT	1 cut(s)	329
BfaI	CTAG	3 cut(s)	330, 729, 1368
BfmI	CTRYAG	3 cut(s)	990, 1188, 1576
BfoI	RGCGCY	1 cut(s)	419
BfuAI	ACCTGC	2 cut(s)	1569, 1583
BisI	GCNGC	9 cut(s)	97, 407, 431, 499, 963, 966, 1902, 1905, 1977
BlpI	GCTNAGC	1 cut(s)	1515
BlsI	GCNGC	9 cut(s)	98, 408, 432, 500, 964, 967, 1903, 1906, 1978
Bme1390I	CCNGG	3 cut(s)	151, 812, 1298
Bme18I	GGWCC	2 cut(s)	530, 1863
BmeT110I	CYCGRG	1 cut(s)	29
BmgBI	CACGTC	1 cut(s)	1492
BmgT120I	GGNCC	4 cut(s)	530, 1327, 1553, 1863
BmiI	GGNNCC	3 cut(s)	417, 1328, 1865
BmrFI	CCNGG	3 cut(s)	151, 812, 1298
BmrI	ACTGGG	1 cut(s)	1330
BmsI	GCATC	5 cut(s)	187, 571, 759, 916, 1273
BmuI	ACTGGG	1 cut(s)	1330
BpiI	GAAGAC	1 cut(s)	1791
BplI	GAGNNNNNCTC	4 cut(s)	377, 409, 1594, 1626
BpmI	CTGGAG	1 cut(s)	852
Bpu10I	CCTNAGC	1 cut(s)	648
Bpu1102I	GCTNAGC	1 cut(s)	1515
BpuEI	CTTGAG	3 cut(s)	473, 661, 1580
BpuMI	CCSGG	1 cut(s)	151
BsaAI	YACGTR	1 cut(s)	782
BsaBI	GATNNNNATC	1 cut(s)	930
BsaHI	GRCGYC	1 cut(s)	416
BsaI	GGTCTC	1 cut(s)	938
BsaJI	CCNNGG	3 cut(s)	111, 1272, 1847
BsaWI	WCCGGW	1 cut(s)	532
BsaXI	ACNNNNNCTCC	2 cut(s)	732, 762
Bsc4I	CCNNNNNNNGG	5 cut(s)	896, 1297, 1486, 1581, 1727
Bse118I	RCCGGY	1 cut(s)	532
Bse1I	ACTGG	6 cut(s)	295, 1042, 1162, 1291, 1325, 1536
Bse21I	CCTNAGG	1 cut(s)	1557
Bse3DI	GCAATG	2 cut(s)	408, 1971
Bse8I	GATNNNNATC	1 cut(s)	930
BseBI	CCWGG	2 cut(s)	812, 1298
BseDI	CCNNGG	3 cut(s)	111, 1272, 1847
BseGI	GGATG	8 cut(s)	78, 90, 178, 532, 794, 1288, 1456, 1843
BseJI	GATNNNNATC	1 cut(s)	930
BseLI	CCNNNNNNNGG	5 cut(s)	896, 1297, 1486, 1581, 1727
BseMI	GCAATG	2 cut(s)	408, 1971
BseMII	CTCAG	6 cut(s)	335, 662, 879, 1025, 1506, 1571
BseNI	ACTGG	6 cut(s)	295, 1042, 1162, 1291, 1325, 1536
BseRI	GAGGAG	2 cut(s)	293, 716
BseSI	GKGCMC	1 cut(s)	92
BseXI	GCAGC	7 cut(s)	83, 393, 510, 949, 952, 1888, 1963
BseYI	CCCAGC	1 cut(s)	502
BshFI	GGCC	5 cut(s)	294, 433, 1329, 1554, 2000
BshNI	GGYRCC	1 cut(s)	415
BshTI	ACCGGT	1 cut(s)	532
BsiHKAI	GWGCWC	2 cut(s)	92, 1187
BsiHKCI	CYCGRG	1 cut(s)	29
BsiSI	CCGG	2 cut(s)	151, 533
BslFI	GGGAC	1 cut(s)	1849
BslI	CCNNNNNNNGG	5 cut(s)	896, 1297, 1486, 1581, 1727
BsmAI	GTCTC	3 cut(s)	603, 938, 1070
BsmFI	GGGAC	1 cut(s)	1849
BsmI	GAATGC	1 cut(s)	2062
BsnI	GGCC	5 cut(s)	294, 433, 1329, 1554, 2000
Bso31I	GGTCTC	1 cut(s)	938
BsoBI	CYCGRG	1 cut(s)	29
Bsp1286I	GDGCHC	4 cut(s)	92, 1187, 1469, 1521
Bsp143I	GATC	5 cut(s)	20, 784, 931, 1349, 1942
Bsp1720I	GCTNAGC	1 cut(s)	1515
Bsp19I	CCATGG	1 cut(s)	1272
BspACI	CCGC	4 cut(s)	239, 430, 1904, 1907
BspANI	GGCC	5 cut(s)	294, 433, 1329, 1554, 2000
BspCNI	CTCAG	6 cut(s)	334, 661, 878, 1024, 1507, 1570
BspHI	TCATGA	1 cut(s)	697
BspLI	GGNNCC	3 cut(s)	417, 1328, 1865
BspMAI	CTGCAG	1 cut(s)	1580
BspMI	ACCTGC	2 cut(s)	1569, 1583
BspPI	GGATC	1 cut(s)	779
BspT107I	GGYRCC	1 cut(s)	415
BspTNI	GGTCTC	1 cut(s)	938
BsrDI	GCAATG	2 cut(s)	408, 1971
BsrFI	RCCGGY	1 cut(s)	532
BsrI	ACTGG	6 cut(s)	295, 1042, 1162, 1291, 1325, 1536
BssAI	RCCGGY	1 cut(s)	532
BssECI	CCNNGG	3 cut(s)	111, 1272, 1847
BssMI	GATC	5 cut(s)	20, 784, 931, 1349, 1942
BssNI	GRCGYC	1 cut(s)	416
BssT1I	CCWWGG	3 cut(s)	111, 1272, 1847
Bst2UI	CCWGG	2 cut(s)	812, 1298
Bst4CI	ACNGT	4 cut(s)	364, 468, 1084, 1196
Bst6I	CTCTTC	2 cut(s)	1194, 1368
BstACI	GRCGYC	1 cut(s)	416
BstAPI	GCANNNNNTGC	1 cut(s)	96
BstBAI	YACGTR	1 cut(s)	782
BstC8I	GCNNGC	3 cut(s)	420, 1140, 1722
BstDEI	CTNAG	8 cut(s)	272, 321, 380, 648, 865, 1011, 1515, 1557
BstDSI	CCRYGG	1 cut(s)	1272
BstEII	GGTNACC	1 cut(s)	871
BstF5I	GGATG	8 cut(s)	78, 90, 178, 532, 794, 1288, 1456, 1843
BstH2I	RGCGCY	1 cut(s)	419
BstHHI	GCGC	1 cut(s)	418
BstKTI	GATC	5 cut(s)	23, 787, 934, 1352, 1945
BstMAI	GTCTC	3 cut(s)	603, 938, 1070
BstMBI	GATC	5 cut(s)	20, 784, 931, 1349, 1942
BstMWI	GCNNNNNNNGC	3 cut(s)	96, 415, 1982
BstNI	CCWGG	2 cut(s)	812, 1298
BstNSI	RCATGY	5 cut(s)	120, 656, 809, 1069, 1142
BstPI	GGTNACC	1 cut(s)	871
BstSCI	CCNGG	3 cut(s)	149, 810, 1296
BstSFI	CTRYAG	3 cut(s)	990, 1188, 1576
BstSLI	GKGCMC	1 cut(s)	92
BstV1I	GCAGC	7 cut(s)	83, 393, 510, 949, 952, 1888, 1963
BstV2I	GAAGAC	1 cut(s)	1791
BstXI	CCANNNNNNTGG	1 cut(s)	1279
Bsu36I	CCTNAGG	1 cut(s)	1557
BsuRI	GGCC	5 cut(s)	294, 433, 1329, 1554, 2000
BtgI	CCRYGG	1 cut(s)	1272
BtgZI	GCGATG	1 cut(s)	424
BtrI	CACGTC	1 cut(s)	1492
BtsCI	GGATG	8 cut(s)	78, 90, 178, 532, 794, 1288, 1456, 1843
BtsI	GCAGTG	2 cut(s)	557, 1708
BtsIMutI	CAGTG	4 cut(s)	557, 1201, 1543, 1708
BveI	ACCTGC	2 cut(s)	1569, 1583
Cac8I	GCNNGC	3 cut(s)	420, 1140, 1722
CciI	TCATGA	1 cut(s)	697
CfoI	GCGC	1 cut(s)	418
Cfr10I	RCCGGY	1 cut(s)	532
Cfr13I	GGNCC	4 cut(s)	530, 1327, 1553, 1863
CseI	GACGC	1 cut(s)	1214
Csp6I	GTAC	1 cut(s)	1626
CspAI	ACCGGT	1 cut(s)	532
CspCI	CAANNNNNGTGG	4 cut(s)	100, 135, 1428, 1463
CviQI	GTAC	1 cut(s)	1626
DdeI	CTNAG	8 cut(s)	272, 321, 380, 648, 865, 1011, 1515, 1557
DinI	GGCGCC	1 cut(s)	417
DpnI	GATC	5 cut(s)	22, 786, 933, 1351, 1944
DpnII	GATC	5 cut(s)	20, 784, 931, 1349, 1942
Eam1104I	CTCTTC	2 cut(s)	1194, 1368
EarI	CTCTTC	2 cut(s)	1194, 1368
Ecl136II	GAGCTC	1 cut(s)	1185
Eco130I	CCWWGG	3 cut(s)	111, 1272, 1847
Eco24I	GRGCYC	3 cut(s)	1187, 1469, 1521
Eco31I	GGTCTC	1 cut(s)	938
Eco47I	GGWCC	2 cut(s)	530, 1863
Eco53kI	GAGCTC	1 cut(s)	1185
Eco57I	CTGAAG	3 cut(s)	1074, 1347, 1917
Eco72I	CACGTG	1 cut(s)	782
Eco81I	CCTNAGG	1 cut(s)	1557
Eco88I	CYCGRG	1 cut(s)	29
Eco91I	GGTNACC	1 cut(s)	871
EcoICRI	GAGCTC	1 cut(s)	1185
EcoO65I	GGTNACC	1 cut(s)	871
EcoRI	GAATTC	1 cut(s)	1891
EcoRII	CCWGG	2 cut(s)	810, 1296
EcoT14I	CCWWGG	3 cut(s)	111, 1272, 1847
EcoT38I	GRGCYC	3 cut(s)	1187, 1469, 1521
EgeI	GGCGCC	1 cut(s)	417
EheI	GGCGCC	1 cut(s)	417
ErhI	CCWWGG	3 cut(s)	111, 1272, 1847
FaqI	GGGAC	1 cut(s)	1849
FauI	CCCGC	1 cut(s)	232
FbaI	TGATCA	1 cut(s)	1942
FblI	GTMKAC	2 cut(s)	1387, 1761
Fnu4HI	GCNGC	9 cut(s)	97, 407, 431, 499, 963, 966, 1902, 1905, 1977
FokI	GGATG	8 cut(s)	85, 97, 165, 539, 781, 1295, 1463, 1830
FriOI	GRGCYC	3 cut(s)	1187, 1469, 1521
Fsp4HI	GCNGC	9 cut(s)	97, 407, 431, 499, 963, 966, 1902, 1905, 1977
FspBI	CTAG	3 cut(s)	330, 729, 1368
GlaI	GCGC	1 cut(s)	417
GluI	GCNGC	9 cut(s)	97, 407, 431, 499, 963, 966, 1902, 1905, 1977
GsaI	CCCAGC	1 cut(s)	506
GsuI	CTGGAG	1 cut(s)	852
HaeII	RGCGCY	1 cut(s)	419
HaeIII	GGCC	5 cut(s)	294, 433, 1329, 1554, 2000
HapII	CCGG	2 cut(s)	151, 533
HgaI	GACGC	1 cut(s)	1214
HhaI	GCGC	1 cut(s)	418
Hin1I	GRCGYC	1 cut(s)	416
Hin6I	GCGC	1 cut(s)	416
HinP1I	GCGC	1 cut(s)	416
HincII	GTYRAC	1 cut(s)	1672
HindII	GTYRAC	1 cut(s)	1672
HindIII	AAGCTT	1 cut(s)	1107
HinfI	GANTC	9 cut(s)	62, 346, 356, 545, 694, 983, 1250, 1793, 1808
HpaI	GTTAAC	1 cut(s)	1672
HpaII	CCGG	2 cut(s)	151, 533
HphI	GGTGA	6 cut(s)	547, 883, 1329, 1390, 1802, 1817
Hpy166II	GTNNAC	4 cut(s)	90, 1388, 1672, 1762
Hpy8I	GTNNAC	4 cut(s)	90, 1388, 1672, 1762
HpyAV	CCTTC	8 cut(s)	32, 798, 1049, 1297, 1316, 1479, 1990, 2056
HpyCH4III	ACNGT	4 cut(s)	364, 468, 1084, 1196
HpyCH4IV	ACGT	2 cut(s)	781, 1491
HpyF10VI	GCNNNNNNNGC	3 cut(s)	96, 415, 1982
HpyF3I	CTNAG	8 cut(s)	272, 321, 380, 648, 865, 1011, 1515, 1557
HpySE526I	ACGT	2 cut(s)	781, 1491
Hsp92I	GRCGYC	1 cut(s)	416
HspAI	GCGC	1 cut(s)	416
KasI	GGCGCC	1 cut(s)	415
Ksp22I	TGATCA	1 cut(s)	1942
KspAI	GTTAAC	1 cut(s)	1672
Kzo9I	GATC	5 cut(s)	20, 784, 931, 1349, 1942
LmnI	GCTCC	1 cut(s)	1182
Lsp1109I	GCAGC	7 cut(s)	83, 393, 510, 949, 952, 1888, 1963
LweI	GCATC	5 cut(s)	187, 571, 759, 916, 1273
MaeI	CTAG	3 cut(s)	330, 729, 1368
MaeII	ACGT	2 cut(s)	781, 1491
MaeIII	GTNAC	7 cut(s)	59, 244, 389, 871, 935, 1061, 1335
MalI	GATC	5 cut(s)	22, 786, 933, 1351, 1944
MboI	GATC	5 cut(s)	20, 784, 931, 1349, 1942
MboII	GAAGA	8 cut(s)	589, 852, 978, 1211, 1217, 1385, 1647, 1791
MhlI	GDGCHC	4 cut(s)	92, 1187, 1469, 1521
Mly113I	GGCGCC	1 cut(s)	416
MlyI	GAGTC	2 cut(s)	56, 1802
MmeI	TCCRAC	2 cut(s)	654, 817
MroXI	GAANNNNTTC	1 cut(s)	2009
MseI	TTAA	8 cut(s)	570, 621, 1044, 1221, 1587, 1671, 1781, 2071
MslI	CAYNNNNRTG	3 cut(s)	587, 1277, 1640
MspA1I	CMGCKG	1 cut(s)	506
MspI	CCGG	2 cut(s)	151, 533
MspR9I	CCNGG	3 cut(s)	151, 812, 1298
Mva1269I	GAATGC	1 cut(s)	2062
MvaI	CCWGG	2 cut(s)	812, 1298
MwoI	GCNNNNNNNGC	3 cut(s)	96, 415, 1982
NarI	GGCGCC	1 cut(s)	416
NciI	CCSGG	1 cut(s)	151
NcoI	CCATGG	1 cut(s)	1272
NdeII	GATC	5 cut(s)	20, 784, 931, 1349, 1942
NlaIV	GGNNCC	3 cut(s)	417, 1328, 1865
NmuCI	GTSAC	5 cut(s)	59, 244, 871, 1061, 1335
NspI	RCATGY	5 cut(s)	120, 656, 809, 1069, 1142
PaeI	GCATGC	1 cut(s)	1142
PagI	TCATGA	1 cut(s)	697
PaqCI	CACCTGC	1 cut(s)	1569
PciI	ACATGT	1 cut(s)	1065
PctI	GAATGC	1 cut(s)	2062
PdmI	GAANNNNTTC	1 cut(s)	2009
PfeI	GAWTC	7 cut(s)	346, 356, 545, 694, 983, 1250, 1808
PflMI	CCANNNNNTGG	2 cut(s)	896, 1486
PfoI	TCCNGGA	2 cut(s)	810, 1296
PinAI	ACCGGT	1 cut(s)	532
PkrI	GCNGC	9 cut(s)	98, 408, 432, 500, 964, 967, 1903, 1906, 1978
PleI	GAGTC	2 cut(s)	56, 1801
PluTI	GGCGCC	1 cut(s)	419
PmaCI	CACGTG	1 cut(s)	782
PmlI	CACGTG	1 cut(s)	782
PpsI	GAGTC	2 cut(s)	56, 1801
Ppu21I	YACGTR	1 cut(s)	782
PscI	ACATGT	1 cut(s)	1065
PsiI	TTATAA	1 cut(s)	1683
Psp124BI	GAGCTC	1 cut(s)	1187
Psp6I	CCWGG	2 cut(s)	810, 1296
PspCI	CACGTG	1 cut(s)	782
PspEI	GGTNACC	1 cut(s)	871
PspFI	CCCAGC	1 cut(s)	502
PspGI	CCWGG	2 cut(s)	810, 1296
PspN4I	GGNNCC	3 cut(s)	417, 1328, 1865
PspPI	GGNCC	4 cut(s)	530, 1327, 1553, 1863
PstI	CTGCAG	1 cut(s)	1580
PvuII	CAGCTG	1 cut(s)	506
RsaI	GTAC	1 cut(s)	1627
RsaNI	GTAC	1 cut(s)	1626
RseI	CAYNNNNRTG	3 cut(s)	587, 1277, 1640
SacI	GAGCTC	1 cut(s)	1187
SaqAI	TTAA	8 cut(s)	570, 621, 1044, 1221, 1587, 1671, 1781, 2071
SatI	GCNGC	9 cut(s)	97, 407, 431, 499, 963, 966, 1902, 1905, 1977
Sau3AI	GATC	5 cut(s)	20, 784, 931, 1349, 1942
Sau96I	GGNCC	4 cut(s)	530, 1327, 1553, 1863
SbfI	CCTGCAGG	1 cut(s)	1580
SchI	GAGTC	2 cut(s)	56, 1802
ScrFI	CCNGG	3 cut(s)	151, 812, 1298
SdaI	CCTGCAGG	1 cut(s)	1580
SduI	GDGCHC	4 cut(s)	92, 1187, 1469, 1521
SfaNI	GCATC	5 cut(s)	187, 571, 759, 916, 1273
SfcI	CTRYAG	3 cut(s)	990, 1188, 1576
SfoI	GGCGCC	1 cut(s)	417
SinI	GGWCC	2 cut(s)	530, 1863
SmiMI	CAYNNNNRTG	3 cut(s)	587, 1277, 1640
SmlI	CTYRAG	3 cut(s)	488, 676, 1595
SmoI	CTYRAG	3 cut(s)	488, 676, 1595
SpeI	ACTAGT	1 cut(s)	329
SphI	GCATGC	1 cut(s)	1142
Sse8387I	CCTGCAGG	1 cut(s)	1580
SsiI	CCGC	4 cut(s)	239, 430, 1904, 1907
SspDI	GGCGCC	1 cut(s)	415
SspMI	CTAG	3 cut(s)	330, 729, 1368
SstI	GAGCTC	1 cut(s)	1187
StyD4I	CCNGG	3 cut(s)	149, 810, 1296
StyI	CCWWGG	3 cut(s)	111, 1272, 1847
TaaI	ACNGT	4 cut(s)	364, 468, 1084, 1196
TaiI	ACGT	2 cut(s)	784, 1494
TaqI	TCGA	5 cut(s)	19, 190, 359, 1348, 1915
TauI	GCSGC	2 cut(s)	433, 1907
TfiI	GAWTC	7 cut(s)	346, 356, 545, 694, 983, 1250, 1808
Tru1I	TTAA	8 cut(s)	570, 621, 1044, 1221, 1587, 1671, 1781, 2071
Tru9I	TTAA	8 cut(s)	570, 621, 1044, 1221, 1587, 1671, 1781, 2071
TscAI	CASTG	4 cut(s)	564, 1201, 1543, 1708
TseFI	GTSAC	5 cut(s)	59, 244, 871, 1061, 1335
TseI	GCWGC	7 cut(s)	96, 406, 498, 962, 965, 1901, 1976
Tsp45I	GTSAC	5 cut(s)	59, 244, 871, 1061, 1335
TspGWI	ACGGA	1 cut(s)	171
TspRI	CASTG	4 cut(s)	564, 1201, 1543, 1708
Van91I	CCANNNNNTGG	2 cut(s)	896, 1486
VneI	GTGCAC	1 cut(s)	88
VpaK11BI	GGWCC	2 cut(s)	530, 1863
XapI	RAATTY	2 cut(s)	1525, 1891
XbaI	TCTAGA	1 cut(s)	728
XceI	RCATGY	5 cut(s)	120, 656, 809, 1069, 1142
XcmI	CCANNNNNNNNNTGG	2 cut(s)	827, 1578
XmiI	GTMKAC	2 cut(s)	1387, 1761
XmnI	GAANNNNTTC	1 cut(s)	2009
XspI	CTAG	3 cut(s)	330, 729, 1368

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.