Rh6AG136300

F-Box protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Forward (+)
20733367 .. 20737693
4327 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG136300.1

Sequence Viewer

Length: 1374 bp
ATGTCCGATTGCGTGGTTCGATCATATCCGGAGAGTGAAGGAACAAATGAGCAAACTTGTGAATCTGTTTGGATGGCTCATTGGATGTGCACAAGCTGCAATTCAGAAACCAAGGCGTGTGGTCATGTATCAATTCATTATGAGGAAGCCCAGAAACACAATGATGGTGTTCAGAAGCATCCGTTGTTTCGAGGATTTGGAGAAGTAGCTGAACCTAAAAGAGTGAGGAAAAACAATGAGGGTGTCACTCTGATAGAGAGTTCAAAGAAATTAAGGAAGGAGAGATTGGAAGGCCAGTCCTTTCCAATGTTCAATGTTCCTCAGAAAACTAGTTTGGCTAAACAGAATCAGCAAGATTCGACTGTCAATAGGAGATTACTAAGTGAGAGTAACTCATCTGCAATGCTGCGATGGGCGCCTGCTGATGCGCGGCCTCTGGAAGCTATCCCACCCCTAAAAGAACAACAGGTGAAATATCATAATTTTCTTGAGGACAGCAGCCCAGCTGTTTCCAAGTCTTTTCAGGATGGACCGGTGAGATTAGATTCTAAACTTGCACTGCATCAATTTAAGTGTGGGAGCACTTCTATGCCATTCTTCATTTGTAGAGACAAGGAAGTTAATCAATCCAACTCTCTTTTAGCACCTCAGCATGTTGCAAACACTAATAATTACTCAAGTTCCACATTTTTGATTCATGAGGAGAATATCAATAGCAAGTTGGCGTCTAGAAAATCAGGAGGTTCATTTTCAAGGCAGAATGATGTGATGCTGTTGCAACGTGATCCCTCAACATCCCGTAAGCATGTCCAGGAAATGCAAAGTAAGTCTGGAGTTGGATTGTTTCCAAGCCAGAGTTCTTCCTCAGAGGTGACCAGACATGAAAAACCATATCTTGGATTTTATTCAGCCCCAATCCTGCAACATGCTGATCGTAACACAGAGACCATGAGAATATGTGCTGCTGTTGATGTTGAGAAAGAATCTTCTAGAGGTTATCCCAAGTGTTCTCAGACAACCACTTCTCCAAGAAAGACTGGTTTTAACTTGTCTGAAGGAGGTCACATGTTTGGAGAGAGAACCGTATCAACAAAATTGAAAGGAAAAGCTCTTTGTGAGCTCCTTGTTTCTCCAGAGCATGCTCTCCCTGTTCAGACTGGATTGAGATTGCTACCACACAGGAGCTCTACAGACAGTGAAGAGGAAGATGTAAGAGATGTTAAGCGTCCTGCAAATAGTTTGGATAATGAATCATCATCTGAAACTGATACCATGGACATGGATACCTTCCAGTTCCAGGATAACCTTCCTCTTGGTATTACACTCTATCTCACATATTCTGGCTGTTTAAACTTTTTTTTTGTTTTGTTTTAG

Protein Analysis

457

Amino Acids

51.28

Weight (kDa)

6.95

Isoelectric Point (pI)

62.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 415
AccB7I CCANNNNNTGG 1 cut(s) 896
AccII CGCG 1 cut(s) 430
AccIII TCCGGA 1 cut(s) 28
AciI CCGC 1 cut(s) 430
AclWI GGATC 1 cut(s) 779
AcuI CTGAAG 1 cut(s) 1074
AcyI GRCGYC 2 cut(s) 416, 725
AfiI CCNNNNNNNGG 2 cut(s) 896, 1297
AflIII ACRYGT 1 cut(s) 1065
AgeI ACCGGT 1 cut(s) 532
AgsI TTSAA 4 cut(s) 264, 313, 753, 1099
AhlI ACTAGT 1 cut(s) 329
AjnI CCWGG 2 cut(s) 810, 1296
AjuI GAANNNNNNNTTGG 6 cut(s) 269, 301, 317, 349, 841, 873
AluBI AGCT 7 cut(s) 96, 209, 443, 506, 1109, 1120, 1185
AluI AGCT 7 cut(s) 96, 209, 443, 506, 1109, 1120, 1185
Alw21I GWGCWC 4 cut(s) 92, 584, 1122, 1187
Alw26I GTCTC 2 cut(s) 603, 938
Alw44I GTGCAC 1 cut(s) 88
AlwI GGATC 1 cut(s) 779
Aor13HI TCCGGA 1 cut(s) 28
AoxI GGCC 2 cut(s) 292, 431
ApaLI GTGCAC 1 cut(s) 88
ApeKI GCWGC 4 cut(s) 96, 406, 498, 962
AsiGI ACCGGT 1 cut(s) 532
AspLEI GCGC 2 cut(s) 418, 430
AspS9I GGNCC 1 cut(s) 530
AsuHPI GGTGA 3 cut(s) 481, 547, 883
AvaII GGWCC 1 cut(s) 530
BaeGI GKGCMC 1 cut(s) 92
BanI GGYRCC 1 cut(s) 415
BanII GRGCYC 2 cut(s) 1122, 1187
Bbv12I GWGCWC 4 cut(s) 92, 584, 1122, 1187
BbvCI CCTCAGC 1 cut(s) 648
BbvI GCAGC 4 cut(s) 83, 393, 510, 949
BccI CCATC 4 cut(s) 67, 158, 405, 521
BciT130I CCWGG 2 cut(s) 812, 1298
BciVI GTATCC 1 cut(s) 1276
BcoDI GTCTC 2 cut(s) 603, 938
BcuI ACTAGT 1 cut(s) 329
BfaI CTAG 3 cut(s) 330, 729, 990
BfmI CTRYAG 1 cut(s) 1188
BfoI RGCGCY 1 cut(s) 419
BfuI GTATCC 1 cut(s) 1276
BisI GCNGC 5 cut(s) 97, 407, 431, 499, 963
BlsI GCNGC 5 cut(s) 98, 408, 432, 500, 964
Bme1390I CCNGG 2 cut(s) 812, 1298
Bme18I GGWCC 1 cut(s) 530
BmgT120I GGNCC 1 cut(s) 530
BmiI GGNNCC 1 cut(s) 417
BmrFI CCNGG 2 cut(s) 812, 1298
BmsI GCATC 4 cut(s) 187, 415, 571, 759
BplI GAGNNNNNCTC 2 cut(s) 377, 409
BpmI CTGGAG 2 cut(s) 852, 1116
Bpu10I CCTNAGC 1 cut(s) 648
BpuEI CTTGAG 2 cut(s) 509, 661
BsaHI GRCGYC 2 cut(s) 416, 725
BsaI GGTCTC 1 cut(s) 938
BsaJI CCNNGG 2 cut(s) 111, 1272
BsaWI WCCGGW 2 cut(s) 28, 532
BsaXI ACNNNNNCTCC 2 cut(s) 1009, 1039
Bsc4I CCNNNNNNNGG 2 cut(s) 896, 1297
Bse118I RCCGGY 1 cut(s) 532
Bse1I ACTGG 4 cut(s) 295, 1042, 1162, 1291
Bse3DI GCAATG 1 cut(s) 408
BseAI TCCGGA 1 cut(s) 28
BseBI CCWGG 2 cut(s) 812, 1298
BseDI CCNNGG 2 cut(s) 111, 1272
BseGI GGATG 5 cut(s) 78, 90, 178, 532, 794
BseLI CCNNNNNNNGG 2 cut(s) 896, 1297
BseMI GCAATG 1 cut(s) 408
BseMII CTCAG 4 cut(s) 335, 662, 879, 1025
BseNI ACTGG 4 cut(s) 295, 1042, 1162, 1291
BseRI GAGGAG 1 cut(s) 716
BseSI GKGCMC 1 cut(s) 92
BseXI GCAGC 4 cut(s) 83, 393, 510, 949
BseYI CCCAGC 1 cut(s) 502
Bsh1236I CGCG 1 cut(s) 430
BshFI GGCC 2 cut(s) 294, 433
BshNI GGYRCC 1 cut(s) 415
BshTI ACCGGT 1 cut(s) 532
BsiHKAI GWGCWC 4 cut(s) 92, 584, 1122, 1187
BsiSI CCGG 2 cut(s) 29, 533
BslI CCNNNNNNNGG 2 cut(s) 896, 1297
BsmAI GTCTC 2 cut(s) 603, 938
BsnI GGCC 2 cut(s) 294, 433
Bso31I GGTCTC 1 cut(s) 938
Bsp1286I GDGCHC 4 cut(s) 92, 584, 1122, 1187
Bsp13I TCCGGA 1 cut(s) 28
Bsp143I GATC 3 cut(s) 20, 784, 931
Bsp19I CCATGG 1 cut(s) 1272
BspACI CCGC 1 cut(s) 430
BspANI GGCC 2 cut(s) 294, 433
BspCNI CTCAG 4 cut(s) 334, 661, 878, 1024
BspEI TCCGGA 1 cut(s) 28
BspFNI CGCG 1 cut(s) 430
BspHI TCATGA 1 cut(s) 697
BspLI GGNNCC 1 cut(s) 417
BspPI GGATC 1 cut(s) 779
BspT107I GGYRCC 1 cut(s) 415
BspTNI GGTCTC 1 cut(s) 938
BsrDI GCAATG 1 cut(s) 408
BsrFI RCCGGY 1 cut(s) 532
BsrI ACTGG 4 cut(s) 295, 1042, 1162, 1291
BssAI RCCGGY 1 cut(s) 532
BssECI CCNNGG 2 cut(s) 111, 1272
BssMI GATC 3 cut(s) 20, 784, 931
BssNI GRCGYC 2 cut(s) 416, 725
BssT1I CCWWGG 2 cut(s) 111, 1272
Bst2UI CCWGG 2 cut(s) 812, 1298
Bst4CI ACNGT 3 cut(s) 364, 1084, 1196
Bst6I CTCTTC 1 cut(s) 1194
BstACI GRCGYC 2 cut(s) 416, 725
BstAPI GCANNNNNTGC 1 cut(s) 96
BstC8I GCNNGC 2 cut(s) 420, 1140
BstDEI CTNAG 5 cut(s) 321, 380, 648, 865, 1011
BstDSI CCRYGG 1 cut(s) 1272
BstEII GGTNACC 1 cut(s) 871
BstF5I GGATG 5 cut(s) 78, 90, 178, 532, 794
BstFNI CGCG 1 cut(s) 430
BstH2I RGCGCY 1 cut(s) 419
BstHHI GCGC 2 cut(s) 418, 430
BstKTI GATC 3 cut(s) 23, 787, 934
BstMAI GTCTC 2 cut(s) 603, 938
BstMBI GATC 3 cut(s) 20, 784, 931
BstMWI GCNNNNNNNGC 2 cut(s) 96, 415
BstNI CCWGG 2 cut(s) 812, 1298
BstNSI RCATGY 5 cut(s) 656, 809, 929, 1069, 1142
BstPI GGTNACC 1 cut(s) 871
BstSCI CCNGG 2 cut(s) 810, 1296
BstSFI CTRYAG 1 cut(s) 1188
BstSLI GKGCMC 1 cut(s) 92
BstUI CGCG 1 cut(s) 430
BstV1I GCAGC 4 cut(s) 83, 393, 510, 949
BstXI CCANNNNNNTGG 1 cut(s) 1279
BsuI GTATCC 1 cut(s) 1276
BsuRI GGCC 2 cut(s) 294, 433
BtgI CCRYGG 1 cut(s) 1272
BtgZI GCGATG 1 cut(s) 424
BtsCI GGATG 5 cut(s) 78, 90, 178, 532, 794
BtsI GCAGTG 1 cut(s) 557
BtsIMutI CAGTG 2 cut(s) 557, 1201
Cac8I GCNNGC 2 cut(s) 420, 1140
CciI TCATGA 1 cut(s) 697
CfoI GCGC 2 cut(s) 418, 430
Cfr10I RCCGGY 1 cut(s) 532
Cfr13I GGNCC 1 cut(s) 530
CseI GACGC 2 cut(s) 714, 1214
CspAI ACCGGT 1 cut(s) 532
CspCI CAANNNNNGTGG 2 cut(s) 100, 135
DdeI CTNAG 5 cut(s) 321, 380, 648, 865, 1011
DinI GGCGCC 1 cut(s) 417
DpnI GATC 3 cut(s) 22, 786, 933
DpnII GATC 3 cut(s) 20, 784, 931
DraI TTTAAA 1 cut(s) 1350
Eam1104I CTCTTC 1 cut(s) 1194
EarI CTCTTC 1 cut(s) 1194
Ecl136II GAGCTC 2 cut(s) 1120, 1185
Eco130I CCWWGG 2 cut(s) 111, 1272
Eco24I GRGCYC 2 cut(s) 1122, 1187
Eco31I GGTCTC 1 cut(s) 938
Eco47I GGWCC 1 cut(s) 530
Eco53kI GAGCTC 2 cut(s) 1120, 1185
Eco57I CTGAAG 1 cut(s) 1074
Eco91I GGTNACC 1 cut(s) 871
EcoICRI GAGCTC 2 cut(s) 1120, 1185
EcoO65I GGTNACC 1 cut(s) 871
EcoRII CCWGG 2 cut(s) 810, 1296
EcoT14I CCWWGG 2 cut(s) 111, 1272
EcoT38I GRGCYC 2 cut(s) 1122, 1187
EgeI GGCGCC 1 cut(s) 417
EheI GGCGCC 1 cut(s) 417
ErhI CCWWGG 2 cut(s) 111, 1272
Fnu4HI GCNGC 5 cut(s) 97, 407, 431, 499, 963
FokI GGATG 5 cut(s) 85, 97, 165, 539, 781
FriOI GRGCYC 2 cut(s) 1122, 1187
Fsp4HI GCNGC 5 cut(s) 97, 407, 431, 499, 963
FspBI CTAG 3 cut(s) 330, 729, 990
GlaI GCGC 2 cut(s) 417, 429
GluI GCNGC 5 cut(s) 97, 407, 431, 499, 963
GsaI CCCAGC 1 cut(s) 506
GsuI CTGGAG 2 cut(s) 852, 1116
HaeII RGCGCY 1 cut(s) 419
HaeIII GGCC 2 cut(s) 294, 433
HapII CCGG 2 cut(s) 29, 533
HgaI GACGC 2 cut(s) 714, 1214
HhaI GCGC 2 cut(s) 418, 430
Hin1I GRCGYC 2 cut(s) 416, 725
Hin6I GCGC 2 cut(s) 416, 428
HinP1I GCGC 2 cut(s) 416, 428
HinfI GANTC 7 cut(s) 62, 346, 356, 545, 694, 983, 1250
HpaII CCGG 2 cut(s) 29, 533
HphI GGTGA 3 cut(s) 481, 547, 883
Hpy166II GTNNAC 1 cut(s) 90
Hpy8I GTNNAC 1 cut(s) 90
HpyAV CCTTC 6 cut(s) 32, 271, 284, 1049, 1297, 1316
HpyCH4III ACNGT 3 cut(s) 364, 1084, 1196
HpyCH4IV ACGT 1 cut(s) 781
HpyF10VI GCNNNNNNNGC 2 cut(s) 96, 415
HpyF3I CTNAG 5 cut(s) 321, 380, 648, 865, 1011
HpySE526I ACGT 1 cut(s) 781
Hsp92I GRCGYC 2 cut(s) 416, 725
HspAI GCGC 2 cut(s) 416, 428
KasI GGCGCC 1 cut(s) 415
Kpn2I TCCGGA 1 cut(s) 28
Kzo9I GATC 3 cut(s) 20, 784, 931
LmnI GCTCC 3 cut(s) 579, 1125, 1182
Lsp1109I GCAGC 4 cut(s) 83, 393, 510, 949
LweI GCATC 4 cut(s) 187, 415, 571, 759
MaeI CTAG 3 cut(s) 330, 729, 990
MaeII ACGT 1 cut(s) 781
MaeIII GTNAC 5 cut(s) 244, 389, 871, 935, 1061
MalI GATC 3 cut(s) 22, 786, 933
MboI GATC 3 cut(s) 20, 784, 931
MboII GAAGA 5 cut(s) 589, 852, 978, 1211, 1217
MhlI GDGCHC 4 cut(s) 92, 584, 1122, 1187
MluCI AATT 7 cut(s) 100, 132, 269, 481, 566, 670, 1094
Mly113I GGCGCC 1 cut(s) 416
MmeI TCCRAC 2 cut(s) 654, 817
MroI TCCGGA 1 cut(s) 28
MseI TTAA 6 cut(s) 272, 570, 621, 1044, 1221, 1349
MslI CAYNNNNRTG 3 cut(s) 162, 587, 1277
MspA1I CMGCKG 1 cut(s) 506
MspI CCGG 2 cut(s) 29, 533
MspR9I CCNGG 2 cut(s) 812, 1298
MssI GTTTAAAC 1 cut(s) 1350
MvaI CCWGG 2 cut(s) 812, 1298
MvnI CGCG 1 cut(s) 430
MwoI GCNNNNNNNGC 2 cut(s) 96, 415
NarI GGCGCC 1 cut(s) 416
NcoI CCATGG 1 cut(s) 1272
NdeII GATC 3 cut(s) 20, 784, 931
NlaIV GGNNCC 1 cut(s) 417
NmuCI GTSAC 3 cut(s) 244, 871, 1061
NspI RCATGY 5 cut(s) 656, 809, 929, 1069, 1142
PaeI GCATGC 1 cut(s) 1142
PagI TCATGA 1 cut(s) 697
PciI ACATGT 1 cut(s) 1065
PfeI GAWTC 7 cut(s) 62, 346, 356, 545, 694, 983, 1250
PflMI CCANNNNNTGG 1 cut(s) 896
PfoI TCCNGGA 2 cut(s) 810, 1296
PinAI ACCGGT 1 cut(s) 532
PkrI GCNGC 5 cut(s) 98, 408, 432, 500, 964
PluTI GGCGCC 1 cut(s) 419
PmeI GTTTAAAC 1 cut(s) 1350
PscI ACATGT 1 cut(s) 1065
Psp124BI GAGCTC 2 cut(s) 1122, 1187
Psp6I CCWGG 2 cut(s) 810, 1296
PspEI GGTNACC 1 cut(s) 871
PspFI CCCAGC 1 cut(s) 502
PspGI CCWGG 2 cut(s) 810, 1296
PspN4I GGNNCC 1 cut(s) 417
PspPI GGNCC 1 cut(s) 530
PvuII CAGCTG 1 cut(s) 506
RseI CAYNNNNRTG 3 cut(s) 162, 587, 1277
SacI GAGCTC 2 cut(s) 1122, 1187
SaqAI TTAA 6 cut(s) 272, 570, 621, 1044, 1221, 1349
SatI GCNGC 5 cut(s) 97, 407, 431, 499, 963
Sau3AI GATC 3 cut(s) 20, 784, 931
Sau96I GGNCC 1 cut(s) 530
ScrFI CCNGG 2 cut(s) 812, 1298
SduI GDGCHC 4 cut(s) 92, 584, 1122, 1187
SfaNI GCATC 4 cut(s) 187, 415, 571, 759
SfcI CTRYAG 1 cut(s) 1188
SfoI GGCGCC 1 cut(s) 417
SinI GGWCC 1 cut(s) 530
SmiMI CAYNNNNRTG 3 cut(s) 162, 587, 1277
SmlI CTYRAG 2 cut(s) 488, 676
SmoI CTYRAG 2 cut(s) 488, 676
SpeI ACTAGT 1 cut(s) 329
SphI GCATGC 1 cut(s) 1142
Sse9I AATT 7 cut(s) 100, 132, 269, 481, 566, 670, 1094
SsiI CCGC 1 cut(s) 430
SspDI GGCGCC 1 cut(s) 415
SspMI CTAG 3 cut(s) 330, 729, 990
SstI GAGCTC 2 cut(s) 1122, 1187
StyD4I CCNGG 2 cut(s) 810, 1296
StyI CCWWGG 2 cut(s) 111, 1272
TaaI ACNGT 3 cut(s) 364, 1084, 1196
TaiI ACGT 1 cut(s) 784
TaqI TCGA 3 cut(s) 19, 190, 359
TasI AATT 7 cut(s) 100, 132, 269, 481, 566, 670, 1094
TauI GCSGC 1 cut(s) 433
TfiI GAWTC 7 cut(s) 62, 346, 356, 545, 694, 983, 1250
Tru1I TTAA 6 cut(s) 272, 570, 621, 1044, 1221, 1349
Tru9I TTAA 6 cut(s) 272, 570, 621, 1044, 1221, 1349
TscAI CASTG 2 cut(s) 564, 1201
TseFI GTSAC 3 cut(s) 244, 871, 1061
TseI GCWGC 4 cut(s) 96, 406, 498, 962
Tsp45I GTSAC 3 cut(s) 244, 871, 1061
TspDTI ATGAA 6 cut(s) 125, 589, 686, 735, 897, 1263
TspGWI ACGGA 1 cut(s) 171
TspRI CASTG 2 cut(s) 564, 1201
Van91I CCANNNNNTGG 1 cut(s) 896
VneI GTGCAC 1 cut(s) 88
VpaK11BI GGWCC 1 cut(s) 530
XbaI TCTAGA 2 cut(s) 728, 989
XceI RCATGY 5 cut(s) 656, 809, 929, 1069, 1142
XspI CTAG 3 cut(s) 330, 729, 990
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.