Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0003600

Physical Location & Seq

Genomic Coordinates Reverse (-)

49445243 .. 49448596

Gene Structure 3354 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000014214

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2181 bp

ATGTCTGATTGCGTGGTTCGATCATATCCGGAGAGTGAAGGAACAAATGAGCAAACTTGTGAATCTGTTTCGATGGCTCATTGGACGTGCACAAGCTGCAATTCAGAAACCAAGGCATGTGGTCATGTATCAATTCATTATGAGGAAGCCCAGAAACACAATGATGGTGTTCAGAAGCATCCGTTGTTTCGAGGATTTGGAGAAGTAGCTGAACCTAAAAGAGTGAGGAAAAACAATGAGGGTGTCACTCTGACAGAGAGTTCAAAGAAATTAAGGAAGGAGAGATTGGAAGGCCAATCCTTTCCAATGTTCAACGTTCCTCCAAAAACTAGTTTGGCTAAACAGAATCAGCAAGATTTGACTGTCAATAGGAGATTACTAAGTGAGAGTAACCCATCTGCAATGCTGGGATGGGCGCCTGCTGATGTGCGGCCTCTGGAAGCTATCCCACCCCTAAAAGAACAACAGGTGAAATATCATAATTTTCTCGAGGACAGCAGCCCAGCTGTTTCCAAGTCTTTCCAGGATGGACCGGTGAGATTAGATTCTAAACTAGCACTGCATCAATTCAAGTGTGGGAGCACTTCTATGCCGTTCTTCATTTGTAGAGACAAGGAAGTTAATCAATCTAACTCTCTTTTAGCACCTCAGCATGTTGCAAACACTAATAATTACTCAAGTTCCACATTTTTGATTCATGAGGAGAATATCAATAGCAAGTTGGCGTCTAAAAAATCAGGAGGTTCATTTTCAAGGCAGAATGATCTGATGCTGTTGCAACGTGATCCCTCAACATCCCGTAAGCATGTCCAGGAAATGCAAAGTAAGTCTGGAGTTGGATTATTTCCAAGTCAGAGTTCTTCCTCAGAGGTCACCAGACATGAAAAACCATATCTTGGATTTTATTCAGCCCCAATCCTGCAACATGCTGATCGTAACACAGAGAGCATGAGAATATGTGCTGCTGTTGATGTTGAGAAAGAATATTCTAGAGGTTATCCCAAGTGTTCTCAGACAACCACTTTTCCAAGAAAGACTGGTTTTAACTTGTCTGAAGGAGGTCACATGTTTGGAGAGACAACCGTATCAACAAAATTGAAAGGAAAAGCTTTTTGTGAGCTCCTTGTTTCCCCAGAGCATGCTCTCCCTGTTCAGACTGGATTGAGATTGCTACCATACAGGAGCTCTACGGACAGTGAAGAGGAAGATGTAAGAGATGTTAAGCGTCCTGCAAATACTTTGGATAATGAATCATCATCTGAAACTGATACCATGGACATGGATGCCTTCCAGTTCCAGGATAACCTTCGTCTTGGTGTGGCTTCATCCCCAACGAATGAGCATATTGAGGGGGGCCAGAAGTCACCAACAGCTCGATCTGCCTTTACTTCAGCTAGAGAAGAGGTCAGAGGTAGACCTCCATTCACCAAATTAACTGATATGAACCAAGAGCTTCCAGAGCTTGCAGCTCTTGCAAGTTTAGTGGATGAAAGAGAGACAAGCCCTTCAAGAACCCAAAGTTTGGACGTGGAACATCTCCTTTCCCATGCTGAGCCCACAAATTCAAAATCCAGTCCAAGTCCAGATGGCCCTCAGGGAATAGATCCAAGCTGCAGGTGGGTTAAACGCCTCAAGTTGAGTGCTTCTCACTTTGCTTATGGTACAAAAAGCACAAAAATGGGAGAGGCTTCTTCCCATGAAAAAGTTAACGCACTTTATAAGAAAAATATGAAATGCAGTGCAACTAATTCACAGCCTGCTATGGGCAGATTTCATGGTAGGGAACCGATGTCATTAGATGAAACTCCAATGTTATTAAGGAATGGTGAGTCATCTTCCAGTGATTCAGCAAGGACAAGTCAAAATATATCACTCTCACATCCTTGGATTAGGAGGTGGTCCCACAAAGTAGTTGCACCCCACAAGAATTCTGAAGCTGCGGCGGTTTCTCGACCTCAAAGTTCGAAGGCAACATTTGATCAATTTCAGAAAAAAAGGTTTCCAAGCATTGCTGCTATGGCACTCATGGGGAAGGCCATGAATGGTTTCAATCCATTGATGGCTGATATGGGATTGACGAGGCTCTGGGCATCTACAAGAATCAATCGGTTGAAGTGGACAGTGGAATCACTGGCCACCCACAAGGGAGATGGAGTGGAGTTGTTTAAGACCATGATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006996 GO:0007610 GO:0007622 GO:0007623 GO:0008150 GO:0009628 GO:0009657 GO:0009658 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048511 GO:0048512 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071840 GO:0080090 GO:0080167 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

727

Amino Acids

80.68

Weight (kDa)

8.79

Isoelectric Point (pI)

58.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003600)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16290 AT2G16300 AT2G16365 AT2G16365 AT2G16365 AT2G16365 AT2G16365 AT2G16365 AT4G34550 AT4G34550
fragaria_vesca	FvH4_2g09190 FvH4_2g09190 FvH4_2g09190 FvH4_2g09190
malus_domestica	MD05G1064100.v1.1 MD10G1072800.v1.1
prunus_persica	Prupe.8G094200_v2.0.a1 Prupe.8G094200_v2.0.a1 Prupe.8G094200_v2.0.a1
pyrus_communis	pycom05g05530 pycom10g05750
rosa_chinensis	RchiOBHm_Chr6g0265031
rosa_laevigata	RLG00000014214
rosa_multiflora	Rmu_sc0002934.1_g000016 Rmu_sc0011803.1_g000002 Rmu_sc0042979.1_g000001
rosa_roxburghii	Rroxscaffold_175G00432110 Rroxscaffold_7G00203080
rosa_rugosa	Rorug06G0013500 Rorug06G0013600
rosa_samantha	Rh6AG136300 Rh6BG133200 Rh6CG131700 Rh6DG119000
rosa_wichuraiana	Rw6G011760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1719
AarI	CACCTGC	1 cut(s)	1605
Acc36I	ACCTGC	1 cut(s)	1605
AccB1I	GGYRCC	1 cut(s)	415
AccB7I	CCANNNNNTGG	2 cut(s)	896, 1522
AccI	GTMKAC	1 cut(s)	1414
AccIII	TCCGGA	1 cut(s)	28
AciI	CCGC	3 cut(s)	430, 1940, 1943
AclI	AACGTT	1 cut(s)	315
AclWI	GGATC	2 cut(s)	779, 1598
AcoI	YGGCCR	1 cut(s)	2133
AcsI	RAATTY	2 cut(s)	1561, 1927
AcuI	CTGAAG	3 cut(s)	1074, 1374, 1953
AcyI	GRCGYC	2 cut(s)	416, 725
AfaI	GTAC	1 cut(s)	1663
AfiI	CCNNNNNNNGG	4 cut(s)	896, 1297, 1522, 1763
AflIII	ACRYGT	1 cut(s)	1065
AgeI	ACCGGT	1 cut(s)	532
AgsI	TTSAA	9 cut(s)	264, 313, 571, 753, 1099, 1509, 1566, 2050, 2113
AhlI	ACTAGT	1 cut(s)	329
AjiI	CACGTC	2 cut(s)	87, 1528
AjnI	CCWGG	3 cut(s)	522, 810, 1296
AjuI	GAANNNNNNNTTGG	4 cut(s)	269, 301, 841, 873
Alw21I	GWGCWC	4 cut(s)	92, 584, 1122, 1187
Alw26I	GTCTC	3 cut(s)	603, 1070, 1490
Alw44I	GTGCAC	1 cut(s)	88
AlwI	GGATC	2 cut(s)	779, 1598
Ama87I	CYCGRG	1 cut(s)	488
Aor13HI	TCCGGA	1 cut(s)	28
AoxI	GGCC	6 cut(s)	292, 431, 1354, 1588, 2034, 2133
ApaLI	GTGCAC	1 cut(s)	88
ApeKI	GCWGC	7 cut(s)	96, 498, 962, 1466, 1611, 1937, 2012
ApoI	RAATTY	2 cut(s)	1561, 1927
AsiGI	ACCGGT	1 cut(s)	532
Asp700I	GAANNNNTTC	1 cut(s)	2045
AspLEI	GCGC	1 cut(s)	418
AspS9I	GGNCC	4 cut(s)	530, 1354, 1589, 1899
AsuHPI	GGTGA	6 cut(s)	481, 547, 865, 1356, 1417, 1838
AsuII	TTCGAA	1 cut(s)	1964
AvaI	CYCGRG	1 cut(s)	488
AvaII	GGWCC	2 cut(s)	530, 1899
AxyI	CCTNAGG	1 cut(s)	1593
BaeGI	GKGCMC	1 cut(s)	92
BaeI	ACNNNNGTAYC	2 cut(s)	1068, 1101
BalI	TGGCCA	1 cut(s)	2135
BanI	GGYRCC	1 cut(s)	415
BanII	GRGCYC	3 cut(s)	1122, 1187, 1557
Bbv12I	GWGCWC	4 cut(s)	92, 584, 1122, 1187
BbvCI	CCTCAGC	1 cut(s)	648
BbvI	GCAGC	7 cut(s)	83, 510, 949, 1478, 1598, 1924, 1999
BccI	CCATC	8 cut(s)	67, 158, 403, 405, 521, 1580, 2053, 2144
BceAI	ACGGC	1 cut(s)	577
BciT130I	CCWGG	3 cut(s)	524, 812, 1298
BclI	TGATCA	1 cut(s)	1978
BcoDI	GTCTC	3 cut(s)	603, 1070, 1490
BcuI	ACTAGT	1 cut(s)	329
BfaI	CTAG	4 cut(s)	330, 554, 990, 1395
BfmI	CTRYAG	1 cut(s)	1612
BfoI	RGCGCY	1 cut(s)	419
BfuAI	ACCTGC	1 cut(s)	1605
BisI	GCNGC	9 cut(s)	97, 431, 499, 963, 1467, 1612, 1938, 1941, 2013
BlpI	GCTNAGC	1 cut(s)	1551
BlsI	GCNGC	9 cut(s)	98, 432, 500, 964, 1468, 1613, 1939, 1942, 2014
Bme1390I	CCNGG	3 cut(s)	524, 812, 1298
Bme18I	GGWCC	2 cut(s)	530, 1899
BmeT110I	CYCGRG	1 cut(s)	488
BmgBI	CACGTC	2 cut(s)	87, 1528
BmgT120I	GGNCC	4 cut(s)	530, 1354, 1589, 1899
BmiI	GGNNCC	4 cut(s)	417, 1355, 1785, 1901
BmrFI	CCNGG	3 cut(s)	524, 812, 1298
BmsI	GCATC	5 cut(s)	187, 571, 759, 1273, 2099
BplI	GAGNNNNNCTC	2 cut(s)	1630, 1662
BpmI	CTGGAG	1 cut(s)	852
Bpu10I	CCTNAGC	1 cut(s)	648
Bpu1102I	GCTNAGC	1 cut(s)	1551
Bpu14I	TTCGAA	1 cut(s)	1964
BpuEI	CTTGAG	2 cut(s)	661, 1616
BsaHI	GRCGYC	2 cut(s)	416, 725
BsaJI	CCNNGG	3 cut(s)	111, 1272, 1883
BsaWI	WCCGGW	2 cut(s)	28, 532
BsaXI	ACNNNNNCTCC	2 cut(s)	2139, 2169
Bsc4I	CCNNNNNNNGG	4 cut(s)	896, 1297, 1522, 1763
Bse118I	RCCGGY	1 cut(s)	532
Bse1I	ACTGG	6 cut(s)	1042, 1162, 1291, 1572, 1839, 2136
Bse21I	CCTNAGG	1 cut(s)	1593
Bse3DI	GCAATG	2 cut(s)	408, 2007
BseAI	TCCGGA	1 cut(s)	28
BseBI	CCWGG	3 cut(s)	524, 812, 1298
BseDI	CCNNGG	3 cut(s)	111, 1272, 1883
BseGI	GGATG	8 cut(s)	178, 416, 532, 794, 1288, 1325, 1492, 1879
BseLI	CCNNNNNNNGG	4 cut(s)	896, 1297, 1522, 1763
BseMI	GCAATG	2 cut(s)	408, 2007
BseMII	CTCAG	5 cut(s)	662, 879, 1025, 1542, 1607
BseNI	ACTGG	6 cut(s)	1042, 1162, 1291, 1572, 1839, 2136
BseRI	GAGGAG	1 cut(s)	716
BseSI	GKGCMC	1 cut(s)	92
BseXI	GCAGC	7 cut(s)	83, 510, 949, 1478, 1598, 1924, 1999
BseYI	CCCAGC	2 cut(s)	406, 502
BshFI	GGCC	6 cut(s)	294, 433, 1356, 1590, 2036, 2135
BshNI	GGYRCC	1 cut(s)	415
BshTI	ACCGGT	1 cut(s)	532
BsiHKAI	GWGCWC	4 cut(s)	92, 584, 1122, 1187
BsiHKCI	CYCGRG	1 cut(s)	488
BsiSI	CCGG	2 cut(s)	29, 533
BslFI	GGGAC	1 cut(s)	1885
BslI	CCNNNNNNNGG	4 cut(s)	896, 1297, 1522, 1763
BsmAI	GTCTC	3 cut(s)	603, 1070, 1490
BsmFI	GGGAC	1 cut(s)	1885
BsnI	GGCC	6 cut(s)	294, 433, 1356, 1590, 2036, 2135
BsoBI	CYCGRG	1 cut(s)	488
Bsp119I	TTCGAA	1 cut(s)	1964
Bsp1286I	GDGCHC	5 cut(s)	92, 584, 1122, 1187, 1557
Bsp13I	TCCGGA	1 cut(s)	28
Bsp143I	GATC	7 cut(s)	20, 763, 784, 931, 1376, 1603, 1978
Bsp1720I	GCTNAGC	1 cut(s)	1551
Bsp19I	CCATGG	1 cut(s)	1272
BspACI	CCGC	3 cut(s)	430, 1940, 1943
BspANI	GGCC	6 cut(s)	294, 433, 1356, 1590, 2036, 2135
BspCNI	CTCAG	5 cut(s)	661, 878, 1024, 1543, 1606
BspEI	TCCGGA	1 cut(s)	28
BspHI	TCATGA	1 cut(s)	697
BspLI	GGNNCC	4 cut(s)	417, 1355, 1785, 1901
BspMAI	CTGCAG	1 cut(s)	1616
BspMI	ACCTGC	1 cut(s)	1605
BspPI	GGATC	2 cut(s)	779, 1598
BspT104I	TTCGAA	1 cut(s)	1964
BspT107I	GGYRCC	1 cut(s)	415
BsrDI	GCAATG	2 cut(s)	408, 2007
BsrFI	RCCGGY	1 cut(s)	532
BsrI	ACTGG	6 cut(s)	1042, 1162, 1291, 1572, 1839, 2136
BssAI	RCCGGY	1 cut(s)	532
BssECI	CCNNGG	3 cut(s)	111, 1272, 1883
BssMI	GATC	7 cut(s)	20, 763, 784, 931, 1376, 1603, 1978
BssNI	GRCGYC	2 cut(s)	416, 725
BssT1I	CCWWGG	3 cut(s)	111, 1272, 1883
Bst2UI	CCWGG	3 cut(s)	524, 812, 1298
Bst4CI	ACNGT	4 cut(s)	364, 1084, 1196, 2122
Bst6I	CTCTTC	2 cut(s)	1194, 1395
BstACI	GRCGYC	2 cut(s)	416, 725
BstAPI	GCANNNNNTGC	2 cut(s)	96, 1472
BstBI	TTCGAA	1 cut(s)	1964
BstC8I	GCNNGC	4 cut(s)	420, 1140, 1464, 1758
BstDEI	CTNAG	6 cut(s)	380, 648, 865, 1011, 1551, 1593
BstDSI	CCRYGG	1 cut(s)	1272
BstEII	GGTNACC	1 cut(s)	871
BstF5I	GGATG	8 cut(s)	178, 416, 532, 794, 1288, 1325, 1492, 1879
BstH2I	RGCGCY	1 cut(s)	419
BstHHI	GCGC	1 cut(s)	418
BstKTI	GATC	7 cut(s)	23, 766, 787, 934, 1379, 1606, 1981
BstMAI	GTCTC	3 cut(s)	603, 1070, 1490
BstMBI	GATC	7 cut(s)	20, 763, 784, 931, 1376, 1603, 1978
BstMWI	GCNNNNNNNGC	5 cut(s)	96, 1379, 1459, 1472, 2018
BstNI	CCWGG	3 cut(s)	524, 812, 1298
BstNSI	RCATGY	6 cut(s)	120, 656, 809, 929, 1069, 1142
BstPI	GGTNACC	1 cut(s)	871
BstSCI	CCNGG	3 cut(s)	522, 810, 1296
BstSFI	CTRYAG	1 cut(s)	1612
BstSLI	GKGCMC	1 cut(s)	92
BstV1I	GCAGC	7 cut(s)	83, 510, 949, 1478, 1598, 1924, 1999
BstX2I	RGATCY	1 cut(s)	1603
BstXI	CCANNNNNNTGG	1 cut(s)	1279
BstYI	RGATCY	1 cut(s)	1603
Bsu36I	CCTNAGG	1 cut(s)	1593
BsuRI	GGCC	6 cut(s)	294, 433, 1356, 1590, 2036, 2135
BtgI	CCRYGG	1 cut(s)	1272
BtrI	CACGTC	2 cut(s)	87, 1528
BtsCI	GGATG	8 cut(s)	178, 416, 532, 794, 1288, 1325, 1492, 1879
BtsI	GCAGTG	2 cut(s)	557, 1744
BtsIMutI	CAGTG	6 cut(s)	557, 1201, 1744, 1846, 2127, 2129
BveI	ACCTGC	1 cut(s)	1605
Cac8I	GCNNGC	4 cut(s)	420, 1140, 1464, 1758
CciI	TCATGA	1 cut(s)	697
CfoI	GCGC	1 cut(s)	418
Cfr10I	RCCGGY	1 cut(s)	532
Cfr13I	GGNCC	4 cut(s)	530, 1354, 1589, 1899
CseI	GACGC	2 cut(s)	714, 1214
Csp6I	GTAC	1 cut(s)	1662
CspAI	ACCGGT	1 cut(s)	532
CspCI	CAANNNNNGTGG	4 cut(s)	100, 135, 1464, 1499
CviQI	GTAC	1 cut(s)	1662
DdeI	CTNAG	6 cut(s)	380, 648, 865, 1011, 1551, 1593
DinI	GGCGCC	1 cut(s)	417
DpnI	GATC	7 cut(s)	22, 765, 786, 933, 1378, 1605, 1980
DpnII	GATC	7 cut(s)	20, 763, 784, 931, 1376, 1603, 1978
EaeI	YGGCCR	1 cut(s)	2133
Eam1104I	CTCTTC	2 cut(s)	1194, 1395
EarI	CTCTTC	2 cut(s)	1194, 1395
Ecl136II	GAGCTC	2 cut(s)	1120, 1185
Eco130I	CCWWGG	3 cut(s)	111, 1272, 1883
Eco24I	GRGCYC	3 cut(s)	1122, 1187, 1557
Eco47I	GGWCC	2 cut(s)	530, 1899
Eco53kI	GAGCTC	2 cut(s)	1120, 1185
Eco57I	CTGAAG	3 cut(s)	1074, 1374, 1953
Eco81I	CCTNAGG	1 cut(s)	1593
Eco88I	CYCGRG	1 cut(s)	488
Eco91I	GGTNACC	1 cut(s)	871
EcoICRI	GAGCTC	2 cut(s)	1120, 1185
EcoO65I	GGTNACC	1 cut(s)	871
EcoRI	GAATTC	1 cut(s)	1927
EcoRII	CCWGG	3 cut(s)	522, 810, 1296
EcoT14I	CCWWGG	3 cut(s)	111, 1272, 1883
EcoT38I	GRGCYC	3 cut(s)	1122, 1187, 1557
EgeI	GGCGCC	1 cut(s)	417
EheI	GGCGCC	1 cut(s)	417
ErhI	CCWWGG	3 cut(s)	111, 1272, 1883
FaqI	GGGAC	1 cut(s)	1885
FbaI	TGATCA	1 cut(s)	1978
FblI	GTMKAC	1 cut(s)	1414
Fnu4HI	GCNGC	9 cut(s)	97, 431, 499, 963, 1467, 1612, 1938, 1941, 2013
FokI	GGATG	8 cut(s)	165, 423, 539, 781, 1295, 1312, 1499, 1866
FriOI	GRGCYC	3 cut(s)	1122, 1187, 1557
Fsp4HI	GCNGC	9 cut(s)	97, 431, 499, 963, 1467, 1612, 1938, 1941, 2013
FspBI	CTAG	4 cut(s)	330, 554, 990, 1395
GlaI	GCGC	1 cut(s)	417
GluI	GCNGC	9 cut(s)	97, 431, 499, 963, 1467, 1612, 1938, 1941, 2013
GsaI	CCCAGC	2 cut(s)	410, 506
GsuI	CTGGAG	1 cut(s)	852
HaeII	RGCGCY	1 cut(s)	419
HaeIII	GGCC	6 cut(s)	294, 433, 1356, 1590, 2036, 2135
HapII	CCGG	2 cut(s)	29, 533
HgaI	GACGC	2 cut(s)	714, 1214
HhaI	GCGC	1 cut(s)	418
Hin1I	GRCGYC	2 cut(s)	416, 725
Hin6I	GCGC	1 cut(s)	416
HinP1I	GCGC	1 cut(s)	416
HincII	GTYRAC	1 cut(s)	1708
HindII	GTYRAC	1 cut(s)	1708
HindIII	AAGCTT	1 cut(s)	1107
HinfI	GANTC	9 cut(s)	62, 346, 545, 694, 1250, 1829, 1844, 2100, 2126
HpaI	GTTAAC	1 cut(s)	1708
HpaII	CCGG	2 cut(s)	29, 533
HphI	GGTGA	6 cut(s)	481, 547, 865, 1356, 1417, 1838
Hpy166II	GTNNAC	4 cut(s)	90, 1415, 1708, 2118
Hpy8I	GTNNAC	4 cut(s)	90, 1415, 1708, 2118
HpyAV	CCTTC	9 cut(s)	32, 271, 284, 1049, 1297, 1316, 1515, 1960, 2026
HpyCH4III	ACNGT	4 cut(s)	364, 1084, 1196, 2122
HpyCH4IV	ACGT	4 cut(s)	86, 315, 781, 1527
HpyF10VI	GCNNNNNNNGC	5 cut(s)	96, 1379, 1459, 1472, 2018
HpyF3I	CTNAG	6 cut(s)	380, 648, 865, 1011, 1551, 1593
HpySE526I	ACGT	4 cut(s)	86, 315, 781, 1527
Hsp92I	GRCGYC	2 cut(s)	416, 725
HspAI	GCGC	1 cut(s)	416
KasI	GGCGCC	1 cut(s)	415
Kpn2I	TCCGGA	1 cut(s)	28
Ksp22I	TGATCA	1 cut(s)	1978
KspAI	GTTAAC	1 cut(s)	1708
Kzo9I	GATC	7 cut(s)	20, 763, 784, 931, 1376, 1603, 1978
LmnI	GCTCC	3 cut(s)	579, 1125, 1182
Lsp1109I	GCAGC	7 cut(s)	83, 510, 949, 1478, 1598, 1924, 1999
LweI	GCATC	5 cut(s)	187, 571, 759, 1273, 2099
MaeI	CTAG	4 cut(s)	330, 554, 990, 1395
MaeII	ACGT	4 cut(s)	86, 315, 781, 1527
MaeIII	GTNAC	6 cut(s)	244, 389, 871, 935, 1061, 1362
MalI	GATC	7 cut(s)	22, 765, 786, 933, 1378, 1605, 1980
MboI	GATC	7 cut(s)	20, 763, 784, 931, 1376, 1603, 1978
MboII	GAAGA	7 cut(s)	589, 852, 1211, 1217, 1412, 1683, 1827
MflI	RGATCY	1 cut(s)	1603
MhlI	GDGCHC	5 cut(s)	92, 584, 1122, 1187, 1557
MlsI	TGGCCA	1 cut(s)	2135
MluNI	TGGCCA	1 cut(s)	2135
Mly113I	GGCGCC	1 cut(s)	416
MlyI	GAGTC	1 cut(s)	1838
MmeI	TCCRAC	1 cut(s)	817
Mox20I	TGGCCA	1 cut(s)	2135
MroI	TCCGGA	1 cut(s)	28
MroXI	GAANNNNTTC	1 cut(s)	2045
MscI	TGGCCA	1 cut(s)	2135
MseI	TTAA	9 cut(s)	272, 621, 1044, 1221, 1433, 1623, 1707, 1817, 2166
MslI	CAYNNNNRTG	4 cut(s)	162, 587, 1277, 1676
Msp20I	TGGCCA	1 cut(s)	2135
MspA1I	CMGCKG	1 cut(s)	506
MspI	CCGG	2 cut(s)	29, 533
MspR9I	CCNGG	3 cut(s)	524, 812, 1298
MvaI	CCWGG	3 cut(s)	524, 812, 1298
MwoI	GCNNNNNNNGC	5 cut(s)	96, 1379, 1459, 1472, 2018
NarI	GGCGCC	1 cut(s)	416
NcoI	CCATGG	1 cut(s)	1272
NdeII	GATC	7 cut(s)	20, 763, 784, 931, 1376, 1603, 1978
NlaIV	GGNNCC	4 cut(s)	417, 1355, 1785, 1901
NmuCI	GTSAC	4 cut(s)	244, 871, 1061, 1362
NspI	RCATGY	6 cut(s)	120, 656, 809, 929, 1069, 1142
NspV	TTCGAA	1 cut(s)	1964
PaeI	GCATGC	1 cut(s)	1142
PaeR7I	CTCGAG	1 cut(s)	488
PagI	TCATGA	1 cut(s)	697
PaqCI	CACCTGC	1 cut(s)	1605
PciI	ACATGT	1 cut(s)	1065
PdmI	GAANNNNTTC	1 cut(s)	2045
PfeI	GAWTC	8 cut(s)	62, 346, 545, 694, 1250, 1844, 2100, 2126
PflMI	CCANNNNNTGG	2 cut(s)	896, 1522
PfoI	TCCNGGA	3 cut(s)	522, 810, 1296
PinAI	ACCGGT	1 cut(s)	532
PkrI	GCNGC	9 cut(s)	98, 432, 500, 964, 1468, 1613, 1939, 1942, 2014
PleI	GAGTC	1 cut(s)	1837
PluTI	GGCGCC	1 cut(s)	419
PpsI	GAGTC	1 cut(s)	1837
PscI	ACATGT	1 cut(s)	1065
PsiI	TTATAA	1 cut(s)	1719
Psp124BI	GAGCTC	2 cut(s)	1122, 1187
Psp1406I	AACGTT	1 cut(s)	315
Psp6I	CCWGG	3 cut(s)	522, 810, 1296
PspEI	GGTNACC	1 cut(s)	871
PspFI	CCCAGC	2 cut(s)	406, 502
PspGI	CCWGG	3 cut(s)	522, 810, 1296
PspN4I	GGNNCC	4 cut(s)	417, 1355, 1785, 1901
PspPI	GGNCC	4 cut(s)	530, 1354, 1589, 1899
PstI	CTGCAG	1 cut(s)	1616
PsuI	RGATCY	1 cut(s)	1603
PvuII	CAGCTG	1 cut(s)	506
RsaI	GTAC	1 cut(s)	1663
RsaNI	GTAC	1 cut(s)	1662
RseI	CAYNNNNRTG	4 cut(s)	162, 587, 1277, 1676
SacI	GAGCTC	2 cut(s)	1122, 1187
SaqAI	TTAA	9 cut(s)	272, 621, 1044, 1221, 1433, 1623, 1707, 1817, 2166
SatI	GCNGC	9 cut(s)	97, 431, 499, 963, 1467, 1612, 1938, 1941, 2013
Sau3AI	GATC	7 cut(s)	20, 763, 784, 931, 1376, 1603, 1978
Sau96I	GGNCC	4 cut(s)	530, 1354, 1589, 1899
SchI	GAGTC	1 cut(s)	1838
ScrFI	CCNGG	3 cut(s)	524, 812, 1298
SduI	GDGCHC	5 cut(s)	92, 584, 1122, 1187, 1557
SfaNI	GCATC	5 cut(s)	187, 571, 759, 1273, 2099
SfcI	CTRYAG	1 cut(s)	1612
SfoI	GGCGCC	1 cut(s)	417
Sfr274I	CTCGAG	1 cut(s)	488
SfuI	TTCGAA	1 cut(s)	1964
SinI	GGWCC	2 cut(s)	530, 1899
SlaI	CTCGAG	1 cut(s)	488
SmiMI	CAYNNNNRTG	4 cut(s)	162, 587, 1277, 1676
SmlI	CTYRAG	3 cut(s)	488, 676, 1631
SmoI	CTYRAG	3 cut(s)	488, 676, 1631
SpeI	ACTAGT	1 cut(s)	329
SphI	GCATGC	1 cut(s)	1142
SsiI	CCGC	3 cut(s)	430, 1940, 1943
SspDI	GGCGCC	1 cut(s)	415
SspI	AATATT	1 cut(s)	986
SspMI	CTAG	4 cut(s)	330, 554, 990, 1395
SstI	GAGCTC	2 cut(s)	1122, 1187
StyD4I	CCNGG	3 cut(s)	522, 810, 1296
StyI	CCWWGG	3 cut(s)	111, 1272, 1883
TaaI	ACNGT	4 cut(s)	364, 1084, 1196, 2122
TaiI	ACGT	4 cut(s)	89, 318, 784, 1530
TaqI	TCGA	7 cut(s)	19, 71, 190, 489, 1375, 1951, 1964
TauI	GCSGC	2 cut(s)	433, 1943
TfiI	GAWTC	8 cut(s)	62, 346, 545, 694, 1250, 1844, 2100, 2126
Tru1I	TTAA	9 cut(s)	272, 621, 1044, 1221, 1433, 1623, 1707, 1817, 2166
Tru9I	TTAA	9 cut(s)	272, 621, 1044, 1221, 1433, 1623, 1707, 1817, 2166
TscAI	CASTG	6 cut(s)	564, 1201, 1744, 1846, 2127, 2136
TseFI	GTSAC	4 cut(s)	244, 871, 1061, 1362
TseI	GCWGC	7 cut(s)	96, 498, 962, 1466, 1611, 1937, 2012
Tsp45I	GTSAC	4 cut(s)	244, 871, 1061, 1362
TspGWI	ACGGA	2 cut(s)	171, 1205
TspRI	CASTG	6 cut(s)	564, 1201, 1744, 1846, 2127, 2136
Van91I	CCANNNNNTGG	2 cut(s)	896, 1522
VneI	GTGCAC	1 cut(s)	88
VpaK11BI	GGWCC	2 cut(s)	530, 1899
XapI	RAATTY	2 cut(s)	1561, 1927
XbaI	TCTAGA	1 cut(s)	989
XceI	RCATGY	6 cut(s)	120, 656, 809, 929, 1069, 1142
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1614, 2147
XhoI	CTCGAG	1 cut(s)	488
XmiI	GTMKAC	1 cut(s)	1414
XmnI	GAANNNNTTC	1 cut(s)	2045
XspI	CTAG	4 cut(s)	330, 554, 990, 1395

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.