Prupe.8G138000_v2.0.a1

Protein of unknown function (DUF760)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0010134
Physical Location & Seq
Forward (+)
15743903 .. 15748650
4748 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G138000.2

Sequence Viewer

Length: 1185 bp
ATGGCGACCCTTCCCTCCTTCGTCTCCTTCTCTTCTTCTCTTCCTCTACTTCCTCTGCGCCCTCCTCCTCTTCATCCTCTTATCTCCTCCACCACGACCTCTAACCTCAAACCTAGAAGATTCTCAGGCCTAGTTCTCGCTTCTTCCTCCGCTTCTCCTTTTGACGATCTCAGCTCCAGAAGCAGCTCGCGCCCAATCCAATCCTCCAAATCCAAGAAATCAGTTCTCTCGAATTTGATACAAGAGATAGAACCATTGAACGTGAGCCTTATTCAGAAAGATGTTCCACCTACTACCGTGGATGCCATGAAAAGGACGATTTCGGGCATGTTGGGATTACTTCCATCTGATCAATTTCAAGTTCTTATTGAGGCCTTATGGGAACCTCTATCTAAGTTGTTGGTTTCTTCAATGATGACTGGGTATACCTTAAGGAATGCTGAATATAGGCTTTGCCTAGAACGGAATTTTGATATGTGTGACACAAAACTTGAAAAACAAACACCAGAAAATTCTGAGGTTGATTTGCAAGGGATGTTGCTTGAAAGTGCAAACATAATCAAATTTCCTTCAAAAGATGAGTTTTCATCCAAAGATGGAGAAGTTACTGAAGACTCATTGGAGAATATTGATATTCAAGGTCTTGGTGAAGTGTCTCCTGAGGCTCTACAATATGTTCTTCATTTGCAGGCTCATTTATCTTCTGTCAAAAAGGAACTCCATGATGTCAAGAGACAAAGTGCTGCTCTTCAAATGCAACAGTTTGTTGGAGAAGAAAAGAATGATTTGCTGGACTATTTGAGATCGCTACAGCCAGAAAAGGTAGCTGAGTTATCAGAACCAACATCACCTGAACTGAAAGAAATAATCCACTCTGTTATCCACGGTCTACTTGCAACCCTTTCTCCGAAGATGCATTCTAAGGCACCTCCTTTATCTGATAATGCCTCAACTGGAGTATTAAATGTTGGGAGTGAAGATTGTGCTGAACTTGTTGAGAACACTTCACTTCAGTTTCAGCCACTTATTTCATTAACGCGGGACTACCTAGCACGTCTCCTCTTCTGGTGCATGCTTCTAGGACACTACCTCAAAGGTCTTGAGTATCGGATGGAGCTGACGGAACTTTTGTCCCTGACTAACGATGCTGAAAGCGATACCCTTGATGGCAACCACATTGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF760

Protein Analysis

395

Amino Acids

43.65

Weight (kDa)

5.01

Isoelectric Point (pI)

60.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 925
AccI GTMKAC 2 cut(s) 425, 889
AccII CGCG 2 cut(s) 190, 1039
AciI CCGC 2 cut(s) 150, 1039
AcsI RAATTY 4 cut(s) 232, 466, 511, 563
AcuI CTGAAG 2 cut(s) 630, 995
AfiI CCNNNNNNNGG 1 cut(s) 312
AflII CTTAAG 1 cut(s) 430
AgsI TTSAA 8 cut(s) 259, 359, 411, 494, 545, 573, 638, 752
AjiI CACGTC 1 cut(s) 1055
AluBI AGCT 4 cut(s) 174, 186, 827, 1117
AluI AGCT 4 cut(s) 174, 186, 827, 1117
Alw26I GTCTC 4 cut(s) 28, 660, 727, 1061
AoxI GGCC 2 cut(s) 127, 372
ApeKI GCWGC 2 cut(s) 183, 743
ApoI RAATTY 4 cut(s) 232, 466, 511, 563
ArsI GACNNNNNNTTYG 2 cut(s) 1111, 1143
AspLEI GCGC 2 cut(s) 60, 192
AsuHPI GGTGA 2 cut(s) 659, 840
AxyI CCTNAGG 1 cut(s) 660
BanI GGYRCC 1 cut(s) 925
BbsI GAAGAC 1 cut(s) 618
BbvI GCAGC 2 cut(s) 195, 730
BccI CCATC 4 cut(s) 352, 590, 1105, 1160
BclI TGATCA 1 cut(s) 349
BcoDI GTCTC 4 cut(s) 28, 660, 727, 1061
BfaI CTAG 5 cut(s) 114, 131, 458, 1049, 1079
BfmI CTRYAG 1 cut(s) 809
BfrI CTTAAG 1 cut(s) 430
BisI GCNGC 2 cut(s) 184, 744
BlsI GCNGC 2 cut(s) 185, 745
BmgBI CACGTC 1 cut(s) 1055
BmiI GGNNCC 2 cut(s) 384, 927
BmrI ACTGGG 1 cut(s) 429
BmsI GCATC 3 cut(s) 292, 903, 1135
BmuI ACTGGG 1 cut(s) 429
BpiI GAAGAC 1 cut(s) 618
BpmI CTGGAG 2 cut(s) 160, 975
BpuEI CTTGAG 1 cut(s) 1121
BsaJI CCNNGG 2 cut(s) 297, 883
BsaXI ACNNNNNCTCC 2 cut(s) 889, 919
Bsc4I CCNNNNNNNGG 1 cut(s) 312
Bse1I ACTGG 2 cut(s) 424, 958
Bse21I CCTNAGG 1 cut(s) 660
Bse3DI GCAATG 1 cut(s) 1176
BseDI CCNNGG 2 cut(s) 297, 883
BseGI GGATG 5 cut(s) 73, 307, 540, 587, 1116
BseLI CCNNNNNNNGG 1 cut(s) 312
BseMI GCAATG 1 cut(s) 1176
BseMII CTCAG 5 cut(s) 138, 184, 507, 651, 819
BseNI ACTGG 2 cut(s) 424, 958
BseRI GAGGAG 4 cut(s) 54, 57, 76, 1049
BseXI GCAGC 2 cut(s) 195, 730
Bsh1236I CGCG 2 cut(s) 190, 1039
BshFI GGCC 2 cut(s) 129, 374
BshNI GGYRCC 1 cut(s) 925
BslFI GGGAC 2 cut(s) 1055, 1117
BslI CCNNNNNNNGG 1 cut(s) 312
BsmAI GTCTC 4 cut(s) 28, 660, 727, 1061
BsmBI CGTCTC 2 cut(s) 28, 1061
BsmFI GGGAC 2 cut(s) 1055, 1117
BsmI GAATGC 2 cut(s) 442, 916
BsnI GGCC 2 cut(s) 129, 374
Bsp143I GATC 3 cut(s) 166, 349, 803
BspACI CCGC 2 cut(s) 150, 1039
BspANI GGCC 2 cut(s) 129, 374
BspCNI CTCAG 5 cut(s) 137, 183, 508, 652, 820
BspFNI CGCG 2 cut(s) 190, 1039
BspLI GGNNCC 2 cut(s) 384, 927
BspQI GCTCTTC 1 cut(s) 753
BspT107I GGYRCC 1 cut(s) 925
BspTI CTTAAG 1 cut(s) 430
BsrDI GCAATG 1 cut(s) 1176
BsrI ACTGG 2 cut(s) 424, 958
BssECI CCNNGG 2 cut(s) 297, 883
BssMI GATC 3 cut(s) 166, 349, 803
BssNAI GTATAC 1 cut(s) 426
Bst1107I GTATAC 1 cut(s) 426
Bst4CI ACNGT 3 cut(s) 298, 762, 887
Bst6I CTCTTC 5 cut(s) 37, 45, 75, 753, 1067
BstAFI CTTAAG 1 cut(s) 430
BstC8I GCNNGC 3 cut(s) 188, 690, 1073
BstDEI CTNAG 7 cut(s) 124, 170, 393, 516, 660, 828, 921
BstDSI CCRYGG 2 cut(s) 297, 883
BstF5I GGATG 5 cut(s) 73, 307, 540, 587, 1116
BstFNI CGCG 2 cut(s) 190, 1039
BstHHI GCGC 2 cut(s) 60, 192
BstKTI GATC 3 cut(s) 169, 352, 806
BstMAI GTCTC 4 cut(s) 28, 660, 727, 1061
BstMBI GATC 3 cut(s) 166, 349, 803
BstMWI GCNNNNNNNGC 2 cut(s) 180, 189
BstNSI RCATGY 2 cut(s) 331, 1075
BstSFI CTRYAG 1 cut(s) 809
BstUI CGCG 2 cut(s) 190, 1039
BstV1I GCAGC 2 cut(s) 195, 730
BstV2I GAAGAC 1 cut(s) 618
BstZ17I GTATAC 1 cut(s) 426
Bsu36I CCTNAGG 1 cut(s) 660
BsuRI GGCC 2 cut(s) 129, 374
BtgI CCRYGG 2 cut(s) 297, 883
BtrI CACGTC 1 cut(s) 1055
BtsCI GGATG 5 cut(s) 73, 307, 540, 587, 1116
Cac8I GCNNGC 3 cut(s) 188, 690, 1073
CfoI GCGC 2 cut(s) 60, 192
CviAII CATG 4 cut(s) 307, 328, 722, 1072
DdeI CTNAG 7 cut(s) 124, 170, 393, 516, 660, 828, 921
DpnI GATC 3 cut(s) 168, 351, 805
DpnII GATC 3 cut(s) 166, 349, 803
Eam1104I CTCTTC 5 cut(s) 37, 45, 75, 753, 1067
EarI CTCTTC 5 cut(s) 37, 45, 75, 753, 1067
Eco147I AGGCCT 2 cut(s) 129, 374
Eco57I CTGAAG 2 cut(s) 630, 995
Eco81I CCTNAGG 1 cut(s) 660
EcoT22I ATGCAT 1 cut(s) 918
Esp3I CGTCTC 2 cut(s) 28, 1061
FaeI CATG 4 cut(s) 310, 331, 725, 1075
FaqI GGGAC 2 cut(s) 1055, 1117
FatI CATG 4 cut(s) 306, 327, 721, 1071
FauI CCCGC 1 cut(s) 1032
FbaI TGATCA 1 cut(s) 349
FblI GTMKAC 2 cut(s) 425, 889
Fnu4HI GCNGC 2 cut(s) 184, 744
FokI GGATG 5 cut(s) 60, 314, 547, 574, 1123
Fsp4HI GCNGC 2 cut(s) 184, 744
FspBI CTAG 5 cut(s) 114, 131, 458, 1049, 1079
GlaI GCGC 2 cut(s) 59, 191
GluI GCNGC 2 cut(s) 184, 744
GsuI CTGGAG 2 cut(s) 160, 975
HaeIII GGCC 2 cut(s) 129, 374
HhaI GCGC 2 cut(s) 60, 192
Hin1II CATG 4 cut(s) 310, 331, 725, 1075
Hin6I GCGC 2 cut(s) 58, 190
HinP1I GCGC 2 cut(s) 58, 190
HinfI GANTC 2 cut(s) 120, 614
HphI GGTGA 2 cut(s) 659, 840
Hpy166II GTNNAC 2 cut(s) 426, 890
Hpy188I TCNGA 7 cut(s) 276, 349, 517, 838, 909, 940, 1110
Hpy188III TCNNGA 5 cut(s) 177, 229, 659, 730, 1100
Hpy8I GTNNAC 2 cut(s) 426, 890
HpyAV CCTTC 4 cut(s) 20, 28, 37, 579
HpyCH4III ACNGT 3 cut(s) 298, 762, 887
HpyCH4IV ACGT 2 cut(s) 261, 1054
HpyCH4V TGCA 8 cut(s) 529, 551, 688, 757, 896, 916, 1071, 1181
HpyF10VI GCNNNNNNNGC 2 cut(s) 180, 189
HpyF3I CTNAG 7 cut(s) 124, 170, 393, 516, 660, 828, 921
HpySE526I ACGT 2 cut(s) 261, 1054
Hsp92II CATG 4 cut(s) 310, 331, 725, 1075
HspAI GCGC 2 cut(s) 58, 190
Ksp22I TGATCA 1 cut(s) 349
Kzo9I GATC 3 cut(s) 166, 349, 803
LguI GCTCTTC 1 cut(s) 753
LmnI GCTCC 2 cut(s) 179, 1114
Lsp1109I GCAGC 2 cut(s) 195, 730
LweI GCATC 3 cut(s) 292, 903, 1135
MaeI CTAG 5 cut(s) 114, 131, 458, 1049, 1079
MaeII ACGT 2 cut(s) 261, 1054
MaeIII GTNAC 2 cut(s) 479, 604
MalI GATC 3 cut(s) 168, 351, 805
MboI GATC 3 cut(s) 166, 349, 803
MluCI AATT 5 cut(s) 232, 353, 466, 511, 563
MlyI GAGTC 1 cut(s) 608
MmeI TCCRAC 1 cut(s) 748
Mph1103I ATGCAT 1 cut(s) 918
MseI TTAA 3 cut(s) 431, 962, 1034
MspCI CTTAAG 1 cut(s) 430
Mva1269I GAATGC 2 cut(s) 442, 916
MvnI CGCG 2 cut(s) 190, 1039
MwoI GCNNNNNNNGC 2 cut(s) 180, 189
NdeII GATC 3 cut(s) 166, 349, 803
NlaIII CATG 4 cut(s) 310, 331, 725, 1075
NlaIV GGNNCC 2 cut(s) 384, 927
NmuCI GTSAC 1 cut(s) 479
NsiI ATGCAT 1 cut(s) 918
NspI RCATGY 2 cut(s) 331, 1075
PaeI GCATGC 1 cut(s) 1075
PceI AGGCCT 2 cut(s) 129, 374
PciSI GCTCTTC 1 cut(s) 753
PctI GAATGC 2 cut(s) 442, 916
PfeI GAWTC 1 cut(s) 120
PkrI GCNGC 2 cut(s) 185, 745
PleI GAGTC 1 cut(s) 608
PpsI GAGTC 1 cut(s) 608
PspN4I GGNNCC 2 cut(s) 384, 927
SapI GCTCTTC 1 cut(s) 753
SaqAI TTAA 3 cut(s) 431, 962, 1034
SatI GCNGC 2 cut(s) 184, 744
Sau3AI GATC 3 cut(s) 166, 349, 803
SchI GAGTC 1 cut(s) 608
SfaNI GCATC 3 cut(s) 292, 903, 1135
SfcI CTRYAG 1 cut(s) 809
SmlI CTYRAG 2 cut(s) 430, 1100
SmoI CTYRAG 2 cut(s) 430, 1100
SphI GCATGC 1 cut(s) 1075
Sse9I AATT 5 cut(s) 232, 353, 466, 511, 563
SseBI AGGCCT 2 cut(s) 129, 374
SsiI CCGC 2 cut(s) 150, 1039
SspI AATATT 1 cut(s) 628
SspMI CTAG 5 cut(s) 114, 131, 458, 1049, 1079
StuI AGGCCT 2 cut(s) 129, 374
TaaI ACNGT 3 cut(s) 298, 762, 887
TaiI ACGT 2 cut(s) 264, 1057
TaqI TCGA 1 cut(s) 230
TasI AATT 5 cut(s) 232, 353, 466, 511, 563
TfiI GAWTC 1 cut(s) 120
Tru1I TTAA 3 cut(s) 431, 962, 1034
Tru9I TTAA 3 cut(s) 431, 962, 1034
TseFI GTSAC 1 cut(s) 479
TseI GCWGC 2 cut(s) 183, 743
Tsp45I GTSAC 1 cut(s) 479
TspDTI ATGAA 5 cut(s) 62, 323, 576, 671, 1020
TspGWI ACGGA 2 cut(s) 478, 1136
Vha464I CTTAAG 1 cut(s) 430
XapI RAATTY 4 cut(s) 232, 466, 511, 563
XceI RCATGY 2 cut(s) 331, 1075
XmiI GTMKAC 2 cut(s) 425, 889
XspI CTAG 5 cut(s) 114, 131, 458, 1049, 1079
Zsp2I ATGCAT 1 cut(s) 918
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.