Rh6AG069000

Protein of unknown function (DUF760)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Reverse (-)
9983897 .. 9988329
4433 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG069000.1

Sequence Viewer

Length: 1176 bp
ATGGCCACTCTCCGCTCCTTCATCTCCTCCTCTTCTTCTCTTCATCTACTCCCTCCTCCTCTGCTTCGCTTTTCTTCTCCTCCTCCTCCTCCTATCTTCCGCCACATCGCTACCCCTAGAAGATTCTCGCGCCTGGTCCTCGCATCTTCTTCTTCTTCTTCGGCTTCTCCTTTCGACGATCTCAGACGTCCGATTCAATCCTCCAAGAAGTCGGTTCTCTCAAATTTGATACAAGAGATAGAGCCCTTGAACGTGAGCCTCATTCAGAAGGATGTTCCACCTATGACTGTGGATGCTATGAAAAGAACTATTTCAGGCATGTTGGGCTTACTTCCATCTGATCAATTTCACGTTGTTATTGAGGCTTTATGGGAACCACTCTCCAAGTTGTTGGTTTCTTCGATGATGACTGGATATACTCTAAGGAATGCTGAATATAGACTTTGCTTAGAACGAAACTTTGATATATCTGAAGAAAATCTTGAAAAGCAAACATCAGAAGATTCTAACGTTGATTTACAAGGGATGCTGCTTGAAAGTGCAAATATAATCAAATTTCATGCAAAAGATGAGTTTTCACCTAAGGCTGGAGAAGTGATGGAAGACCCATTGGAGAATCTTGATATTCAAGGCCTCGGTGAAGTGTCACCTGAGGTTCAACAATATATTCTTCATTTGCAGGCTCATTTGTCTTCTGCCAAAAAGGAACTCCACGATGTCAAAAGGAAAAGTGCTGCTCTTCAAATGCAACAGTTTGTTGGGGAAGAAAAGAATGATTTACTGGACTATTTAAGATCACTACAGCCCGAAAAGGTAGCTGAGCTATCAGAACCAACATCCCCTGAACTTAAAGAAATAATCCACTCTGTTGTCCATGGTCTACTTGCAACCCTTTCTCCAAAGATGCATTCTAAGGCGCCTCCTTTATCTGAGAATACCTCAGCTGGAGCAATAAATGTCGGAAGTGAAGATTGTGCTGAACTAGTTGAAAACACATCACTTCAATTTCAGCCGCTTATTCTATTAACGCGGGACTACCTAGCACGCCTCCTCTTCTGGTGCATGCTGTTAGGACACTACCTTAAGGGCCTCGAGTATCGAATGGAGCTAACGGAACTTCTTGCCCTAACAAGCAATCCTGAAGGTGATACCCCTGATGGGCAACAAATTGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

391

Amino Acids

43.57

Weight (kDa)

5.24

Isoelectric Point (pI)

65.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF760 PF05542 73 - 154 1.2e-25 Protein of unknown function (DUF760)
DUF760 PF05542 259 - 374 1.9e-23 Protein of unknown function (DUF760)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 190
AccB1I GGYRCC 1 cut(s) 916
AccBSI CCGCTC 1 cut(s) 15
AccI GTMKAC 1 cut(s) 880
AccII CGCG 2 cut(s) 130, 1030
AciI CCGC 4 cut(s) 13, 100, 1013, 1030
AclI AACGTT 1 cut(s) 510
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 2 cut(s) 223, 554
AcuI CTGAAG 2 cut(s) 492, 1161
AcyI GRCGYC 2 cut(s) 187, 917
AfiI CCNNNNNNNGG 2 cut(s) 587, 1158
AflII CTTAAG 1 cut(s) 1082
AgsI TTSAA 9 cut(s) 197, 250, 485, 536, 629, 659, 743, 989, 1004
AhlI ACTAGT 1 cut(s) 982
AjnI CCWGG 1 cut(s) 132
AjuI GAANNNNNNNTTGG 2 cut(s) 892, 924
AluBI AGCT 4 cut(s) 818, 823, 944, 1108
AluI AGCT 4 cut(s) 818, 823, 944, 1108
Ama87I CYCGRG 1 cut(s) 1091
AoxI GGCC 3 cut(s) 3, 631, 1087
ApeKI GCWGC 2 cut(s) 529, 734
ApoI RAATTY 2 cut(s) 223, 554
Asp700I GAANNNNTTC 1 cut(s) 310
AspLEI GCGC 2 cut(s) 132, 919
AspS9I GGNCC 2 cut(s) 136, 1087
AsuHPI GGTGA 4 cut(s) 570, 639, 650, 1157
AvaI CYCGRG 1 cut(s) 1091
AvaII GGWCC 1 cut(s) 136
AxyI CCTNAGG 2 cut(s) 582, 651
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 1 cut(s) 916
BanII GRGCYC 1 cut(s) 246
BbsI GAAGAC 2 cut(s) 609, 684
BbvCI CCTCAGC 1 cut(s) 940
BbvI GCAGC 2 cut(s) 516, 721
BccI CCATC 3 cut(s) 343, 592, 1151
BciT130I CCWGG 1 cut(s) 134
BclI TGATCA 1 cut(s) 340
BcuI ACTAGT 1 cut(s) 982
BfaI CTAG 3 cut(s) 117, 983, 1040
BfmI CTRYAG 1 cut(s) 800
BfoI RGCGCY 1 cut(s) 920
BfrI CTTAAG 1 cut(s) 1082
BisI GCNGC 3 cut(s) 530, 735, 1013
BlpI GCTNAGC 1 cut(s) 819
BlsI GCNGC 3 cut(s) 531, 736, 1014
Bme1390I CCNGG 1 cut(s) 134
Bme18I GGWCC 1 cut(s) 136
BmeT110I CYCGRG 1 cut(s) 1091
BmgT120I GGNCC 2 cut(s) 136, 1087
BmiI GGNNCC 2 cut(s) 375, 918
BmrFI CCNGG 1 cut(s) 134
BmsI GCATC 4 cut(s) 152, 283, 516, 894
BpiI GAAGAC 2 cut(s) 609, 684
BplI GAGNNNNNCTC 2 cut(s) 923, 955
BpmI CTGGAG 2 cut(s) 609, 966
Bpu10I CCTNAGC 1 cut(s) 940
Bpu1102I GCTNAGC 1 cut(s) 819
BsaHI GRCGYC 2 cut(s) 187, 917
BsaJI CCNNGG 2 cut(s) 634, 874
BsaXI ACNNNNNCTCC 2 cut(s) 880, 910
Bsc4I CCNNNNNNNGG 2 cut(s) 587, 1158
Bse1I ACTGG 2 cut(s) 415, 786
Bse21I CCTNAGG 2 cut(s) 582, 651
BseBI CCWGG 1 cut(s) 134
BseDI CCNNGG 2 cut(s) 634, 874
BseGI GGATG 4 cut(s) 277, 298, 531, 836
BseLI CCNNNNNNNGG 2 cut(s) 587, 1158
BseMII CTCAG 5 cut(s) 196, 642, 810, 921, 954
BseNI ACTGG 2 cut(s) 415, 786
BseRI GAGGAG 9 cut(s) 16, 19, 45, 48, 69, 72, 75, 78, 1040
BseXI GCAGC 2 cut(s) 516, 721
Bsh1236I CGCG 2 cut(s) 130, 1030
BshFI GGCC 3 cut(s) 5, 633, 1089
BshNI GGYRCC 1 cut(s) 916
BsiHKCI CYCGRG 1 cut(s) 1091
BslFI GGGAC 1 cut(s) 1046
BslI CCNNNNNNNGG 2 cut(s) 587, 1158
BsmFI GGGAC 1 cut(s) 1046
BsmI GAATGC 2 cut(s) 433, 907
BsnI GGCC 3 cut(s) 5, 633, 1089
BsoBI CYCGRG 1 cut(s) 1091
Bsp1286I GDGCHC 1 cut(s) 246
Bsp143I GATC 3 cut(s) 178, 340, 794
Bsp1720I GCTNAGC 1 cut(s) 819
Bsp19I CCATGG 1 cut(s) 874
BspACI CCGC 4 cut(s) 13, 100, 1013, 1030
BspANI GGCC 3 cut(s) 5, 633, 1089
BspCNI CTCAG 5 cut(s) 195, 643, 811, 922, 953
BspFNI CGCG 2 cut(s) 130, 1030
BspLI GGNNCC 2 cut(s) 375, 918
BspQI GCTCTTC 1 cut(s) 744
BspT107I GGYRCC 1 cut(s) 916
BspTI CTTAAG 1 cut(s) 1082
BsrBI CCGCTC 1 cut(s) 15
BsrI ACTGG 2 cut(s) 415, 786
BssECI CCNNGG 2 cut(s) 634, 874
BssMI GATC 3 cut(s) 178, 340, 794
BssNI GRCGYC 2 cut(s) 187, 917
BssT1I CCWWGG 1 cut(s) 874
Bst2UI CCWGG 1 cut(s) 134
Bst4CI ACNGT 2 cut(s) 289, 753
Bst6I CTCTTC 4 cut(s) 37, 45, 744, 1058
BstACI GRCGYC 2 cut(s) 187, 917
BstAFI CTTAAG 1 cut(s) 1082
BstC8I GCNNGC 3 cut(s) 681, 1045, 1064
BstDEI CTNAG 9 cut(s) 182, 422, 448, 582, 651, 819, 912, 930, 940
BstDSI CCRYGG 1 cut(s) 874
BstF5I GGATG 4 cut(s) 277, 298, 531, 836
BstFNI CGCG 2 cut(s) 130, 1030
BstH2I RGCGCY 1 cut(s) 920
BstHHI GCGC 2 cut(s) 132, 919
BstKTI GATC 3 cut(s) 181, 343, 797
BstMBI GATC 3 cut(s) 178, 340, 794
BstMWI GCNNNNNNNGC 1 cut(s) 324
BstNI CCWGG 1 cut(s) 134
BstNSI RCATGY 2 cut(s) 322, 1066
BstSCI CCNGG 1 cut(s) 132
BstSFI CTRYAG 1 cut(s) 800
BstUI CGCG 2 cut(s) 130, 1030
BstV1I GCAGC 2 cut(s) 516, 721
BstV2I GAAGAC 2 cut(s) 609, 684
BstXI CCANNNNNNTGG 1 cut(s) 391
Bsu36I CCTNAGG 2 cut(s) 582, 651
BsuRI GGCC 3 cut(s) 5, 633, 1089
BtgI CCRYGG 1 cut(s) 874
BtgZI GCGATG 1 cut(s) 91
BtsCI GGATG 4 cut(s) 277, 298, 531, 836
Cac8I GCNNGC 3 cut(s) 681, 1045, 1064
CfoI GCGC 2 cut(s) 132, 919
Cfr13I GGNCC 2 cut(s) 136, 1087
CviAII CATG 4 cut(s) 319, 560, 875, 1063
DdeI CTNAG 9 cut(s) 182, 422, 448, 582, 651, 819, 912, 930, 940
DinI GGCGCC 1 cut(s) 918
DpnI GATC 3 cut(s) 180, 342, 796
DpnII GATC 3 cut(s) 178, 340, 794
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 4 cut(s) 37, 45, 744, 1058
EarI CTCTTC 4 cut(s) 37, 45, 744, 1058
EciI GGCGGA 1 cut(s) 89
Eco130I CCWWGG 1 cut(s) 874
Eco147I AGGCCT 1 cut(s) 633
Eco24I GRGCYC 1 cut(s) 246
Eco47I GGWCC 1 cut(s) 136
Eco57I CTGAAG 2 cut(s) 492, 1161
Eco81I CCTNAGG 2 cut(s) 582, 651
Eco88I CYCGRG 1 cut(s) 1091
EcoO109I RGGNCCY 1 cut(s) 1087
EcoRII CCWGG 1 cut(s) 132
EcoT14I CCWWGG 1 cut(s) 874
EcoT22I ATGCAT 1 cut(s) 909
EcoT38I GRGCYC 1 cut(s) 246
EgeI GGCGCC 1 cut(s) 918
EheI GGCGCC 1 cut(s) 918
ErhI CCWWGG 1 cut(s) 874
FaeI CATG 4 cut(s) 322, 563, 878, 1066
FalI AAGNNNNNCTT 2 cut(s) 465, 497
FaqI GGGAC 1 cut(s) 1046
FatI CATG 4 cut(s) 318, 559, 874, 1062
FauI CCCGC 1 cut(s) 1023
FbaI TGATCA 1 cut(s) 340
FblI GTMKAC 1 cut(s) 880
Fnu4HI GCNGC 3 cut(s) 530, 735, 1013
FokI GGATG 4 cut(s) 284, 305, 538, 823
FriOI GRGCYC 1 cut(s) 246
Fsp4HI GCNGC 3 cut(s) 530, 735, 1013
FspBI CTAG 3 cut(s) 117, 983, 1040
GlaI GCGC 2 cut(s) 131, 918
GluI GCNGC 3 cut(s) 530, 735, 1013
GsuI CTGGAG 2 cut(s) 609, 966
HaeII RGCGCY 1 cut(s) 920
HaeIII GGCC 3 cut(s) 5, 633, 1089
HhaI GCGC 2 cut(s) 132, 919
Hin1I GRCGYC 2 cut(s) 187, 917
Hin1II CATG 4 cut(s) 322, 563, 878, 1066
Hin6I GCGC 2 cut(s) 130, 917
HinP1I GCGC 2 cut(s) 130, 917
HinfI GANTC 4 cut(s) 123, 193, 503, 616
HphI GGTGA 4 cut(s) 570, 639, 650, 1157
Hpy166II GTNNAC 1 cut(s) 881
Hpy188I TCNGA 9 cut(s) 185, 192, 267, 340, 472, 499, 829, 931, 962
Hpy188III TCNNGA 3 cut(s) 482, 620, 1139
Hpy8I GTNNAC 1 cut(s) 881
Hpy99I CGWCG 1 cut(s) 179
HpyAV CCTTC 3 cut(s) 28, 262, 1136
HpyCH4III ACNGT 2 cut(s) 289, 753
HpyCH4IV ACGT 4 cut(s) 187, 252, 351, 510
HpyCH4V TGCA 7 cut(s) 542, 563, 679, 748, 887, 907, 1062
HpyF10VI GCNNNNNNNGC 1 cut(s) 324
HpyF3I CTNAG 9 cut(s) 182, 422, 448, 582, 651, 819, 912, 930, 940
HpySE526I ACGT 4 cut(s) 187, 252, 351, 510
Hsp92I GRCGYC 2 cut(s) 187, 917
Hsp92II CATG 4 cut(s) 322, 563, 878, 1066
HspAI GCGC 2 cut(s) 130, 917
KasI GGCGCC 1 cut(s) 916
Ksp22I TGATCA 1 cut(s) 340
Kzo9I GATC 3 cut(s) 178, 340, 794
LguI GCTCTTC 1 cut(s) 744
LmnI GCTCC 3 cut(s) 20, 947, 1105
Lsp1109I GCAGC 2 cut(s) 516, 721
LweI GCATC 4 cut(s) 152, 283, 516, 894
MaeI CTAG 3 cut(s) 117, 983, 1040
MaeII ACGT 4 cut(s) 187, 252, 351, 510
MaeIII GTNAC 1 cut(s) 645
MalI GATC 3 cut(s) 180, 342, 796
MbiI CCGCTC 1 cut(s) 15
MboI GATC 3 cut(s) 178, 340, 794
MhlI GDGCHC 1 cut(s) 246
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 5 cut(s) 223, 344, 554, 1004, 1167
MluNI TGGCCA 1 cut(s) 5
Mly113I GGCGCC 1 cut(s) 917
MmeI TCCRAC 1 cut(s) 940
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 1 cut(s) 909
MroXI GAANNNNTTC 1 cut(s) 310
MscI TGGCCA 1 cut(s) 5
MseI TTAA 4 cut(s) 791, 849, 1025, 1083
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 944
MspCI CTTAAG 1 cut(s) 1082
MspR9I CCNGG 1 cut(s) 134
Mva1269I GAATGC 2 cut(s) 433, 907
MvaI CCWGG 1 cut(s) 134
MvnI CGCG 2 cut(s) 130, 1030
MwoI GCNNNNNNNGC 1 cut(s) 324
NarI GGCGCC 1 cut(s) 917
NcoI CCATGG 1 cut(s) 874
NdeII GATC 3 cut(s) 178, 340, 794
NlaIII CATG 4 cut(s) 322, 563, 878, 1066
NlaIV GGNNCC 2 cut(s) 375, 918
NmuCI GTSAC 1 cut(s) 645
NsiI ATGCAT 1 cut(s) 909
NspI RCATGY 2 cut(s) 322, 1066
PaeI GCATGC 1 cut(s) 1066
PaeR7I CTCGAG 1 cut(s) 1091
PceI AGGCCT 1 cut(s) 633
PciSI GCTCTTC 1 cut(s) 744
PctI GAATGC 2 cut(s) 433, 907
PdmI GAANNNNTTC 1 cut(s) 310
PfeI GAWTC 4 cut(s) 123, 193, 503, 616
PkrI GCNGC 3 cut(s) 531, 736, 1014
PluTI GGCGCC 1 cut(s) 920
Psp1406I AACGTT 1 cut(s) 510
Psp6I CCWGG 1 cut(s) 132
PspGI CCWGG 1 cut(s) 132
PspN4I GGNNCC 2 cut(s) 375, 918
PspPI GGNCC 2 cut(s) 136, 1087
PspXI VCTCGAGB 1 cut(s) 1091
PvuII CAGCTG 1 cut(s) 944
SapI GCTCTTC 1 cut(s) 744
SaqAI TTAA 4 cut(s) 791, 849, 1025, 1083
SatI GCNGC 3 cut(s) 530, 735, 1013
Sau3AI GATC 3 cut(s) 178, 340, 794
Sau96I GGNCC 2 cut(s) 136, 1087
ScrFI CCNGG 1 cut(s) 134
SduI GDGCHC 1 cut(s) 246
SfaNI GCATC 4 cut(s) 152, 283, 516, 894
SfcI CTRYAG 1 cut(s) 800
SfoI GGCGCC 1 cut(s) 918
Sfr274I CTCGAG 1 cut(s) 1091
SinI GGWCC 1 cut(s) 136
SlaI CTCGAG 1 cut(s) 1091
SmlI CTYRAG 2 cut(s) 1082, 1091
SmoI CTYRAG 2 cut(s) 1082, 1091
SpeI ACTAGT 1 cut(s) 982
SphI GCATGC 1 cut(s) 1066
Sse9I AATT 5 cut(s) 223, 344, 554, 1004, 1167
SseBI AGGCCT 1 cut(s) 633
SsiI CCGC 4 cut(s) 13, 100, 1013, 1030
SspDI GGCGCC 1 cut(s) 916
SspMI CTAG 3 cut(s) 117, 983, 1040
StuI AGGCCT 1 cut(s) 633
StyD4I CCNGG 1 cut(s) 132
StyI CCWWGG 1 cut(s) 874
TaaI ACNGT 2 cut(s) 289, 753
TaiI ACGT 4 cut(s) 190, 255, 354, 513
TaqI TCGA 4 cut(s) 174, 401, 1092, 1099
TasI AATT 5 cut(s) 223, 344, 554, 1004, 1167
TauI GCSGC 1 cut(s) 1015
TfiI GAWTC 4 cut(s) 123, 193, 503, 616
Tru1I TTAA 4 cut(s) 791, 849, 1025, 1083
Tru9I TTAA 4 cut(s) 791, 849, 1025, 1083
TseFI GTSAC 1 cut(s) 645
TseI GCWGC 2 cut(s) 529, 734
Tsp45I GTSAC 1 cut(s) 645
TspDTI ATGAA 5 cut(s) 10, 32, 314, 548, 662
TspGWI ACGGA 1 cut(s) 1127
Vha464I CTTAAG 1 cut(s) 1082
VpaK11BI GGWCC 1 cut(s) 136
XapI RAATTY 2 cut(s) 223, 554
XceI RCATGY 2 cut(s) 322, 1066
XhoI CTCGAG 1 cut(s) 1091
XmiI GTMKAC 1 cut(s) 880
XmnI GAANNNNTTC 1 cut(s) 310
XspI CTAG 3 cut(s) 117, 983, 1040
ZraI GACGTC 1 cut(s) 188
Zsp2I ATGCAT 1 cut(s) 909
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.