Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0008362

Physical Location & Seq

Genomic Coordinates Reverse (-)

16414837 .. 16417616

Gene Structure 2780 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G151000.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 663 bp

ATGGCTTCTCTTCAAATGTTGAAGTCCTCTCTCTCCCCTATGCCCGTTTCCCACTCAAATTTTCAGGGAAAATCCAGCTGGGTTTTCTCGGGAATCCAGTCCAGGAAAAGTTCTATCAGGTTGTCAAGTTATCGGGGGTCTGGATATTACTTGAGAAGGAGATTAAGGGTCTGCTGCAAAGCTCAAGAAGGCGACAACAAAAGCAATGGTGAAGAACCTCCGGAGTCACTGTTTATGAAGGAATTAAGGAGGAGGGGTATGACTCCCACTTCTTTGCTTGAGGAAAAAGAGAGGATTGAGTATGGAGCCAATGATGAGATGGGAAAAGAAGATAGAGGTTTTTCAACTAGAAATGCGGTCTCAACCGAAATTGAGAAAAGCCTAGCTAATCAAAGGGAGCGCTCCATGCAGTTGAACAGTGAAGGCCTTGAGGGGCTAATCCCTCGGGCCAGACTCTTGCTGACAATTGGGGGGACATTCTTCTTGGGGTTTTGGCCATTAATACTTATAACTGTAGCACTCTTCTCTGCTCTCTACTTGTACTTTGGATCAACTTTTATCCACGACGGAAGCAGTTCGCCAATATCACCACCCCAATACATTGATCCGTATGAACTTCTGGAAGATGAAAGGATTTCTCAAATAGCACCTCGTGTAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

221

Amino Acids

24.86

Weight (kDa)

8.86

Isoelectric Point (pI)

58.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008362)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50020
fragaria_vesca	FvH4_2g03130 FvH4_2g03130 FvH4_2g03130 FvH4_2g03130
malus_domestica	MD05G1106900.v1.1 MD10G1111900.v1.1
prunus_persica	Prupe.8G151000_v2.0.a1 Prupe.8G151000_v2.0.a1 Prupe.8G151000_v2.0.a1
pyrus_communis	pycom05g10380 pycom10g09670
rosa_chinensis	RchiOBHm_Chr6g0248001
rosa_laevigata	RLG00000015164
rosa_multiflora	Rmu_sc0010633.1_g000009 Rmu_sc0025757.1_g000004
rosa_roxburghii	Rroxscaffold_7G00213510
rosa_rugosa	Rorug05G0530100
rosa_samantha	Rh6AG045000 Rh6BG040100 Rh6CG038500 Rh6DG035500
rosa_wichuraiana	Rw6G003910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	509
AccIII	TCCGGA	1 cut(s)	220
AciI	CCGC	1 cut(s)	356
AclWI	GGATC	2 cut(s)	556, 599
AcoI	YGGCCR	1 cut(s)	494
AcsI	RAATTY	1 cut(s)	58
AdeI	CACNNNGTG	1 cut(s)	653
AfaI	GTAC	1 cut(s)	542
AfeI	AGCGCT	1 cut(s)	401
AgsI	TTSAA	4 cut(s)	14, 22, 345, 415
AjnI	CCWGG	1 cut(s)	101
AluBI	AGCT	3 cut(s)	78, 182, 386
AluI	AGCT	3 cut(s)	78, 182, 386
Alw26I	GTCTC	1 cut(s)	364
AlwI	GGATC	2 cut(s)	556, 599
Ama87I	CYCGRG	2 cut(s)	88, 444
Aor13HI	TCCGGA	1 cut(s)	220
Aor51HI	AGCGCT	1 cut(s)	401
AoxI	GGCC	3 cut(s)	424, 447, 494
ApeKI	GCWGC	1 cut(s)	174
ApoI	RAATTY	1 cut(s)	58
AseI	ATTAAT	1 cut(s)	500
Asp700I	GAANNNNTTC	1 cut(s)	574
AspLEI	GCGC	1 cut(s)	402
AspS9I	GGNCC	1 cut(s)	447
AsuHPI	GGTGA	2 cut(s)	221, 579
AvaI	CYCGRG	2 cut(s)	88, 444
BalI	TGGCCA	1 cut(s)	496
BauI	CACGAG	1 cut(s)	651
BbvI	GCAGC	1 cut(s)	161
BccI	CCATC	1 cut(s)	313
BciT130I	CCWGG	1 cut(s)	103
BcoDI	GTCTC	1 cut(s)	364
BfaI	CTAG	2 cut(s)	348, 383
BfmI	CTRYAG	1 cut(s)	513
BfoI	RGCGCY	1 cut(s)	403
BisI	GCNGC	1 cut(s)	175
BlsI	GCNGC	1 cut(s)	176
Bme1390I	CCNGG	1 cut(s)	103
BmeT110I	CYCGRG	2 cut(s)	88, 444
BmgT120I	GGNCC	1 cut(s)	447
BmiI	GGNNCC	1 cut(s)	307
BmrFI	CCNGG	1 cut(s)	103
BpuEI	CTTGAG	4 cut(s)	168, 172, 299, 449
BsaI	GGTCTC	1 cut(s)	364
BsaJI	CCNNGG	1 cut(s)	443
BsaWI	WCCGGW	1 cut(s)	220
BsaXI	ACNNNNNCTCC	4 cut(s)	215, 241, 245, 271
Bse1I	ACTGG	1 cut(s)	97
Bse3DI	GCAATG	1 cut(s)	211
BseAI	TCCGGA	1 cut(s)	220
BseBI	CCWGG	1 cut(s)	103
BseDI	CCNNGG	1 cut(s)	443
BseMI	GCAATG	1 cut(s)	211
BseNI	ACTGG	1 cut(s)	97
BseRI	GAGGAG	1 cut(s)	265
BseXI	GCAGC	1 cut(s)	161
BseYI	CCCAGC	1 cut(s)	78
BshFI	GGCC	3 cut(s)	426, 449, 496
BsiHKCI	CYCGRG	2 cut(s)	88, 444
BsiSI	CCGG	1 cut(s)	221
BslFI	GGGAC	1 cut(s)	487
BsmAI	GTCTC	1 cut(s)	364
BsmFI	GGGAC	1 cut(s)	487
BsnI	GGCC	3 cut(s)	426, 449, 496
Bso31I	GGTCTC	1 cut(s)	364
BsoBI	CYCGRG	2 cut(s)	88, 444
Bsp13I	TCCGGA	1 cut(s)	220
Bsp143I	GATC	2 cut(s)	548, 604
BspACI	CCGC	1 cut(s)	356
BspANI	GGCC	3 cut(s)	426, 449, 496
BspEI	TCCGGA	1 cut(s)	220
BspLI	GGNNCC	1 cut(s)	307
BspPI	GGATC	2 cut(s)	556, 599
BspTNI	GGTCTC	1 cut(s)	364
BsrDI	GCAATG	1 cut(s)	211
BsrI	ACTGG	1 cut(s)	97
BssECI	CCNNGG	1 cut(s)	443
BssMI	GATC	2 cut(s)	548, 604
BssSI	CACGAG	1 cut(s)	651
Bst2BI	CACGAG	1 cut(s)	651
Bst2UI	CCWGG	1 cut(s)	103
Bst4CI	ACNGT	3 cut(s)	231, 419, 514
Bst6I	CTCTTC	2 cut(s)	15, 527
BstH2I	RGCGCY	1 cut(s)	403
BstHHI	GCGC	1 cut(s)	402
BstKTI	GATC	2 cut(s)	551, 607
BstMAI	GTCTC	1 cut(s)	364
BstMBI	GATC	2 cut(s)	548, 604
BstMWI	GCNNNNNNNGC	1 cut(s)	406
BstNI	CCWGG	1 cut(s)	103
BstSCI	CCNGG	1 cut(s)	101
BstSFI	CTRYAG	1 cut(s)	513
BstV1I	GCAGC	1 cut(s)	161
BsuRI	GGCC	3 cut(s)	426, 449, 496
BtsIMutI	CAGTG	2 cut(s)	227, 424
CfoI	GCGC	1 cut(s)	402
Cfr13I	GGNCC	1 cut(s)	447
Csp6I	GTAC	1 cut(s)	541
CviAII	CATG	1 cut(s)	406
CviQI	GTAC	1 cut(s)	541
DpnI	GATC	2 cut(s)	550, 606
DpnII	GATC	2 cut(s)	548, 604
DraIII	CACNNNGTG	1 cut(s)	653
EaeI	YGGCCR	1 cut(s)	494
Eam1104I	CTCTTC	2 cut(s)	15, 527
EarI	CTCTTC	2 cut(s)	15, 527
Eco147I	AGGCCT	1 cut(s)	426
Eco31I	GGTCTC	1 cut(s)	364
Eco47III	AGCGCT	1 cut(s)	401
Eco88I	CYCGRG	2 cut(s)	88, 444
EcoRII	CCWGG	1 cut(s)	101
FaeI	CATG	1 cut(s)	409
FaiI	YATR	7 cut(s)	41, 236, 260, 303, 407, 509, 612
FaqI	GGGAC	1 cut(s)	487
FatI	CATG	1 cut(s)	405
Fnu4HI	GCNGC	1 cut(s)	175
Fsp4HI	GCNGC	1 cut(s)	175
FspBI	CTAG	2 cut(s)	348, 383
GlaI	GCGC	1 cut(s)	401
GluI	GCNGC	1 cut(s)	175
GsaI	CCCAGC	1 cut(s)	82
HaeII	RGCGCY	1 cut(s)	403
HaeIII	GGCC	3 cut(s)	426, 449, 496
HapII	CCGG	1 cut(s)	221
HhaI	GCGC	1 cut(s)	402
Hin1II	CATG	1 cut(s)	409
Hin6I	GCGC	1 cut(s)	400
HinP1I	GCGC	1 cut(s)	400
HinfI	GANTC	4 cut(s)	93, 224, 262, 453
HpaII	CCGG	1 cut(s)	221
HphI	GGTGA	2 cut(s)	221, 579
Hpy188III	TCNNGA	5 cut(s)	90, 141, 185, 221, 620
Hpy99I	CGWCG	1 cut(s)	569
HpyAV	CCTTC	4 cut(s)	150, 182, 232, 416
HpyCH4III	ACNGT	3 cut(s)	231, 419, 514
HpyCH4V	TGCA	2 cut(s)	177, 409
HpyF10VI	GCNNNNNNNGC	1 cut(s)	406
Hsp92II	CATG	1 cut(s)	409
HspAI	GCGC	1 cut(s)	400
Kpn2I	TCCGGA	1 cut(s)	220
Kzo9I	GATC	2 cut(s)	548, 604
LmnI	GCTCC	3 cut(s)	305, 397, 407
Lsp1109I	GCAGC	1 cut(s)	161
MaeI	CTAG	2 cut(s)	348, 383
MaeIII	GTNAC	1 cut(s)	225
MalI	GATC	2 cut(s)	550, 606
MboI	GATC	2 cut(s)	548, 604
MboII	GAAGA	5 cut(s)	224, 341, 472, 514, 635
MfeI	CAATTG	1 cut(s)	465
MlsI	TGGCCA	1 cut(s)	496
MluCI	AATT	5 cut(s)	58, 242, 369, 465, 658
MluNI	TGGCCA	1 cut(s)	496
MlyI	GAGTC	3 cut(s)	233, 256, 447
Mox20I	TGGCCA	1 cut(s)	496
MroI	TCCGGA	1 cut(s)	220
MroXI	GAANNNNTTC	1 cut(s)	574
MscI	TGGCCA	1 cut(s)	496
MseI	TTAA	3 cut(s)	164, 245, 500
Msp20I	TGGCCA	1 cut(s)	496
MspA1I	CMGCKG	1 cut(s)	78
MspI	CCGG	1 cut(s)	221
MspR9I	CCNGG	1 cut(s)	103
MunI	CAATTG	1 cut(s)	465
MvaI	CCWGG	1 cut(s)	103
MwoI	GCNNNNNNNGC	1 cut(s)	406
NdeII	GATC	2 cut(s)	548, 604
NlaIII	CATG	1 cut(s)	409
NlaIV	GGNNCC	1 cut(s)	307
NmuCI	GTSAC	1 cut(s)	225
PceI	AGGCCT	1 cut(s)	426
PdmI	GAANNNNTTC	1 cut(s)	574
PfeI	GAWTC	1 cut(s)	93
PfoI	TCCNGGA	1 cut(s)	101
PkrI	GCNGC	1 cut(s)	176
PleI	GAGTC	3 cut(s)	232, 256, 447
PpsI	GAGTC	3 cut(s)	232, 256, 447
PshBI	ATTAAT	1 cut(s)	500
PsiI	TTATAA	1 cut(s)	509
Psp6I	CCWGG	1 cut(s)	101
PspFI	CCCAGC	1 cut(s)	78
PspGI	CCWGG	1 cut(s)	101
PspN4I	GGNNCC	1 cut(s)	307
PspPI	GGNCC	1 cut(s)	447
PvuII	CAGCTG	1 cut(s)	78
RsaI	GTAC	1 cut(s)	542
RsaNI	GTAC	1 cut(s)	541
SaqAI	TTAA	3 cut(s)	164, 245, 500
SatI	GCNGC	1 cut(s)	175
Sau3AI	GATC	2 cut(s)	548, 604
Sau96I	GGNCC	1 cut(s)	447
SchI	GAGTC	3 cut(s)	233, 256, 447
ScrFI	CCNGG	1 cut(s)	103
SetI	ASST	7 cut(s)	80, 122, 184, 220, 340, 388, 652
SfcI	CTRYAG	1 cut(s)	513
SmlI	CTYRAG	4 cut(s)	151, 183, 278, 428
SmoI	CTYRAG	4 cut(s)	151, 183, 278, 428
Sse9I	AATT	5 cut(s)	58, 242, 369, 465, 658
SseBI	AGGCCT	1 cut(s)	426
SsiI	CCGC	1 cut(s)	356
SspMI	CTAG	2 cut(s)	348, 383
StuI	AGGCCT	1 cut(s)	426
StyD4I	CCNGG	1 cut(s)	101
TaaI	ACNGT	3 cut(s)	231, 419, 514
TasI	AATT	5 cut(s)	58, 242, 369, 465, 658
TatI	WGTACW	1 cut(s)	540
TfiI	GAWTC	1 cut(s)	93
Tru1I	TTAA	3 cut(s)	164, 245, 500
Tru9I	TTAA	3 cut(s)	164, 245, 500
TscAI	CASTG	2 cut(s)	234, 424
TseFI	GTSAC	1 cut(s)	225
TseI	GCWGC	1 cut(s)	174
Tsp45I	GTSAC	1 cut(s)	225
TspDTI	ATGAA	3 cut(s)	251, 627, 642
TspGWI	ACGGA	2 cut(s)	582, 597
TspRI	CASTG	2 cut(s)	234, 424
VspI	ATTAAT	1 cut(s)	500
XapI	RAATTY	1 cut(s)	58
XcmI	CCANNNNNNNNNTGG	1 cut(s)	316
XmnI	GAANNNNTTC	1 cut(s)	574
XspI	CTAG	2 cut(s)	348, 383

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.