Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0005813

Physical Location & Seq

Genomic Coordinates Forward (+)

16902575 .. 16904305

Gene Structure 1731 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G160300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 957 bp

ATGGGTTCCTGTTTCCCTAAACAGATAGAACGCCGTAAGGCGATCTCAACGGAGAGGAAAACAATGCGTGATCTTCATCAAAGCTGTGGTGAGGACTTTCCAGCTTGTGCCCTTAGGCCTACAGATAGAAAAAATTGGATGGCAGGCCTCAACCCTGAGAAGATTCACATACACAAGATTTTATGGCCAGGAACACATGACTCTGCAACCAACAAGATTGGATTTCCATGCATAACTAGGCCTTTTGCACAATGCCAAACTCTGTCCATCTACCAACAGCTTGTCATAGGCACCAGAGTGCTTGACATTCGGGTTCAAAAGGATCGTCGCGTCTGCCATGGAATTCTTGTCACATACAGCATTGATGTTGTGATCAGAGACATCAAGAAGTTTCTGTCTGAAACAAAGTCAGAGATCATACTCCTTGAAATCAGGACTGAATATGGTCATGATGACCCTCCTGATTTTGAGCAGTATTTGGTGCATCAATTTGGGGAGGTTCTCATCCACCAGGATGACAATGTGTTCAACAAGACCATTGCAGAATTGTTTCCGAAGCGAATAATATGCGTGTGGAAGCCAAGGAATTCACCTCCGCCTAAGGCAGGGGGCGTTCTATGGAGTTCTGGGCACTTGAAGGATGACTGGATCAACACGGATTTGCCATCGACAAAATTCGAAAGCAACTTGAAGTGTTTGAGTGAGCAGCCTCCAATTTCAACAAGAACATTCTTTTACAGGGTGGAGAACACAGTGACACCTCAGCCTGATTACCCTATTGTGTGTGTGAAACCAGTGACCGGTCGGATTCATGAGTATGCAAGGCTGTTTATAACTCAGTGCTTCTCTAGAGGTATTGAAAATAGGTTGCAAATCTTCTCTACTGATTTTATAGATGAGGATTTTGTTGATGCATGTGTTGCTGTTACATATTCAAGAATTGAACGGAAAGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PI-PLC-X

Protein Analysis

319

Amino Acids

36.72

Weight (kDa)

8.43

Isoelectric Point (pI)

52.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005813)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G38690
fragaria_vesca	FvH4_2g02060 FvH4_4g21970 FvH4_4g21970
malus_domestica	MD05G1115500.v1.1 MD05G1118000.v1.1 MD10G1118000.v1.1 MD10G1121000.v1.1
prunus_persica	Prupe.8G160300_v2.0.a1 Prupe.8G162500_v2.0.a1
pyrus_communis	pycom05g10990
rosa_chinensis	RchiOBHm_Chr6g0244491 RchiOBHm_Chr6g0245281
rosa_laevigata	RLG00000008494 RLG00000015311 RLG00000015354
rosa_rugosa	Rorug05G0509200 Rorug05G0513300
rosa_samantha	Rh6AG024500 Rh6AG028700 Rh6BG019500 Rh6BG024800 Rh6CG017100 Rh6CG022900 Rh6DG018100 Rh6DG022900
rosa_wichuraiana	Rw6G001980 Rw6G002410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	833
AccB1I	GGYRCC	1 cut(s)	290
AccII	CGCG	1 cut(s)	330
AciI	CCGC	1 cut(s)	596
AclWI	GGATC	2 cut(s)	330, 656
AcoI	YGGCCR	1 cut(s)	185
AcsI	RAATTY	3 cut(s)	342, 586, 674
AfiI	CCNNNNNNNGG	2 cut(s)	605, 800
AgeI	ACCGGT	1 cut(s)	800
AgsI	TTSAA	9 cut(s)	317, 428, 529, 637, 691, 720, 860, 936, 944
AjnI	CCWGG	2 cut(s)	187, 510
AleI	CACNNNNGTG	1 cut(s)	296
AluBI	AGCT	3 cut(s)	84, 104, 280
AluI	AGCT	3 cut(s)	84, 104, 280
Alw26I	GTCTC	1 cut(s)	372
AlwI	GGATC	2 cut(s)	330, 656
AoxI	GGCC	4 cut(s)	116, 145, 185, 239
ApeKI	GCWGC	1 cut(s)	706
ApoI	RAATTY	3 cut(s)	342, 586, 674
ArsI	GACNNNNNNTTYG	2 cut(s)	310, 342
AsiGI	ACCGGT	1 cut(s)	800
Asp700I	GAANNNNTTC	1 cut(s)	549
AsuHPI	GGTGA	2 cut(s)	101, 582
AsuII	TTCGAA	1 cut(s)	678
AxyI	CCTNAGG	2 cut(s)	113, 600
BaeGI	GKGCMC	2 cut(s)	112, 633
BalI	TGGCCA	1 cut(s)	187
BanI	GGYRCC	1 cut(s)	290
BbvCI	CCTCAGC	1 cut(s)	762
BbvI	GCAGC	1 cut(s)	718
BccI	CCATC	3 cut(s)	133, 275, 673
BceAI	ACGGC	1 cut(s)	18
BcgI	CGANNNNNNTGC	2 cut(s)	549, 583
BciT130I	CCWGG	2 cut(s)	189, 512
BclI	TGATCA	1 cut(s)	372
BcoDI	GTCTC	1 cut(s)	372
BfaI	CTAG	2 cut(s)	237, 849
BfmI	CTRYAG	1 cut(s)	120
BisI	GCNGC	1 cut(s)	707
BlsI	GCNGC	1 cut(s)	708
Bme1390I	CCNGG	2 cut(s)	189, 512
BmiI	GGNNCC	2 cut(s)	7, 292
BmrFI	CCNGG	2 cut(s)	189, 512
BmsI	GCATC	2 cut(s)	493, 901
Bpu10I	CCTNAGC	1 cut(s)	762
Bpu14I	TTCGAA	1 cut(s)	678
BsaBI	GATNNNNATC	1 cut(s)	75
BsaJI	CCNNGG	2 cut(s)	337, 581
BsaWI	WCCGGW	1 cut(s)	800
Bsc4I	CCNNNNNNNGG	2 cut(s)	605, 800
Bse118I	RCCGGY	1 cut(s)	800
Bse1I	ACTGG	2 cut(s)	650, 794
Bse21I	CCTNAGG	2 cut(s)	113, 600
Bse3DI	GCAATG	1 cut(s)	537
Bse8I	GATNNNNATC	1 cut(s)	75
BseBI	CCWGG	2 cut(s)	189, 512
BseDI	CCNNGG	2 cut(s)	337, 581
BseGI	GGATG	4 cut(s)	144, 504, 520, 646
BseJI	GATNNNNATC	1 cut(s)	75
BseLI	CCNNNNNNNGG	2 cut(s)	605, 800
BseMI	GCAATG	1 cut(s)	537
BseMII	CTCAG	3 cut(s)	147, 776, 851
BseNI	ACTGG	2 cut(s)	650, 794
BseSI	GKGCMC	2 cut(s)	112, 633
BseXI	GCAGC	1 cut(s)	718
Bsh1236I	CGCG	1 cut(s)	330
Bsh1285I	CGRYCG	1 cut(s)	805
BshFI	GGCC	4 cut(s)	118, 147, 187, 241
BshNI	GGYRCC	1 cut(s)	290
BshTI	ACCGGT	1 cut(s)	800
BsiEI	CGRYCG	1 cut(s)	805
BsiSI	CCGG	1 cut(s)	801
BslI	CCNNNNNNNGG	2 cut(s)	605, 800
BsmAI	GTCTC	1 cut(s)	372
BsnI	GGCC	4 cut(s)	118, 147, 187, 241
Bsp119I	TTCGAA	1 cut(s)	678
Bsp1286I	GDGCHC	2 cut(s)	112, 633
Bsp143I	GATC	6 cut(s)	42, 70, 322, 372, 414, 648
Bsp19I	CCATGG	1 cut(s)	337
BspACI	CCGC	1 cut(s)	596
BspANI	GGCC	4 cut(s)	118, 147, 187, 241
BspCNI	CTCAG	3 cut(s)	148, 775, 850
BspFNI	CGCG	1 cut(s)	330
BspHI	TCATGA	2 cut(s)	448, 811
BspLI	GGNNCC	2 cut(s)	7, 292
BspPI	GGATC	2 cut(s)	330, 656
BspT104I	TTCGAA	1 cut(s)	678
BspT107I	GGYRCC	1 cut(s)	290
BsrDI	GCAATG	1 cut(s)	537
BsrFI	RCCGGY	1 cut(s)	800
BsrI	ACTGG	2 cut(s)	650, 794
BssAI	RCCGGY	1 cut(s)	800
BssECI	CCNNGG	2 cut(s)	337, 581
BssMI	GATC	6 cut(s)	42, 70, 322, 372, 414, 648
BssT1I	CCWWGG	2 cut(s)	337, 581
Bst2UI	CCWGG	2 cut(s)	189, 512
Bst4CI	ACNGT	1 cut(s)	754
BstAPI	GCANNNNNTGC	1 cut(s)	920
BstBI	TTCGAA	1 cut(s)	678
BstC8I	GCNNGC	1 cut(s)	145
BstDEI	CTNAG	5 cut(s)	113, 156, 600, 762, 837
BstDSI	CCRYGG	1 cut(s)	337
BstENI	CCTNNNNNAGG	1 cut(s)	603
BstF5I	GGATG	4 cut(s)	144, 504, 520, 646
BstFNI	CGCG	1 cut(s)	330
BstKTI	GATC	6 cut(s)	45, 73, 325, 375, 417, 651
BstMAI	GTCTC	1 cut(s)	372
BstMBI	GATC	6 cut(s)	42, 70, 322, 372, 414, 648
BstMCI	CGRYCG	1 cut(s)	805
BstMWI	GCNNNNNNNGC	1 cut(s)	920
BstNI	CCWGG	2 cut(s)	189, 512
BstNSI	RCATGY	1 cut(s)	918
BstSCI	CCNGG	2 cut(s)	187, 510
BstSFI	CTRYAG	1 cut(s)	120
BstSLI	GKGCMC	2 cut(s)	112, 633
BstUI	CGCG	1 cut(s)	330
BstV1I	GCAGC	1 cut(s)	718
Bsu36I	CCTNAGG	2 cut(s)	113, 600
BsuRI	GGCC	4 cut(s)	118, 147, 187, 241
BtgI	CCRYGG	1 cut(s)	337
BtsCI	GGATG	4 cut(s)	144, 504, 520, 646
BtsIMutI	CAGTG	3 cut(s)	759, 801, 845
Cac8I	GCNNGC	1 cut(s)	145
CciI	TCATGA	2 cut(s)	448, 811
Cfr10I	RCCGGY	1 cut(s)	800
CseI	GACGC	1 cut(s)	319
CspAI	ACCGGT	1 cut(s)	800
CviAII	CATG	6 cut(s)	197, 228, 338, 449, 812, 915
DdeI	CTNAG	5 cut(s)	113, 156, 600, 762, 837
DpnI	GATC	6 cut(s)	44, 72, 324, 374, 416, 650
DpnII	GATC	6 cut(s)	42, 70, 322, 372, 414, 648
EaeI	YGGCCR	1 cut(s)	185
EciI	GGCGGA	1 cut(s)	585
Eco130I	CCWWGG	2 cut(s)	337, 581
Eco147I	AGGCCT	3 cut(s)	118, 147, 241
Eco81I	CCTNAGG	2 cut(s)	113, 600
EcoNI	CCTNNNNNAGG	1 cut(s)	603
EcoRI	GAATTC	2 cut(s)	342, 586
EcoRII	CCWGG	2 cut(s)	187, 510
EcoT14I	CCWWGG	2 cut(s)	337, 581
EcoT22I	ATGCAT	2 cut(s)	233, 916
ErhI	CCWWGG	2 cut(s)	337, 581
FaeI	CATG	6 cut(s)	200, 231, 341, 452, 815, 918
FatI	CATG	6 cut(s)	196, 227, 337, 448, 811, 914
FbaI	TGATCA	1 cut(s)	372
Fnu4HI	GCNGC	1 cut(s)	707
FokI	GGATG	4 cut(s)	151, 491, 527, 653
Fsp4HI	GCNGC	1 cut(s)	707
FspBI	CTAG	2 cut(s)	237, 849
GluI	GCNGC	1 cut(s)	707
HaeIII	GGCC	4 cut(s)	118, 147, 187, 241
HapII	CCGG	1 cut(s)	801
HgaI	GACGC	1 cut(s)	319
Hin1II	CATG	6 cut(s)	200, 231, 341, 452, 815, 918
HinfI	GANTC	3 cut(s)	163, 200, 808
HpaII	CCGG	1 cut(s)	801
HphI	GGTGA	2 cut(s)	101, 582
Hpy188I	TCNGA	5 cut(s)	377, 400, 412, 555, 807
Hpy188III	TCNNGA	7 cut(s)	385, 433, 449, 461, 812, 849, 936
Hpy99I	CGWCG	1 cut(s)	330
HpyAV	CCTTC	1 cut(s)	631
HpyCH4III	ACNGT	1 cut(s)	754
HpyCH4V	TGCA	8 cut(s)	206, 231, 248, 484, 542, 821, 871, 914
HpyF10VI	GCNNNNNNNGC	1 cut(s)	920
HpyF3I	CTNAG	5 cut(s)	113, 156, 600, 762, 837
Hsp92II	CATG	6 cut(s)	200, 231, 341, 452, 815, 918
Ksp22I	TGATCA	1 cut(s)	372
Kzo9I	GATC	6 cut(s)	42, 70, 322, 372, 414, 648
Lsp1109I	GCAGC	1 cut(s)	718
LweI	GCATC	2 cut(s)	493, 901
MaeI	CTAG	2 cut(s)	237, 849
MaeIII	GTNAC	4 cut(s)	349, 754, 796, 925
MalI	GATC	6 cut(s)	44, 72, 324, 374, 416, 650
MboI	GATC	6 cut(s)	42, 70, 322, 372, 414, 648
MboII	GAAGA	3 cut(s)	65, 172, 868
MhlI	GDGCHC	2 cut(s)	112, 633
MlsI	TGGCCA	1 cut(s)	187
MluCI	AATT	8 cut(s)	133, 342, 488, 545, 586, 674, 714, 939
MluNI	TGGCCA	1 cut(s)	187
MlyI	GAGTC	1 cut(s)	194
MmeI	TCCRAC	1 cut(s)	785
Mox20I	TGGCCA	1 cut(s)	187
Mph1103I	ATGCAT	2 cut(s)	233, 916
MroXI	GAANNNNTTC	1 cut(s)	549
MscI	TGGCCA	1 cut(s)	187
MslI	CAYNNNNRTG	3 cut(s)	296, 513, 816
Msp20I	TGGCCA	1 cut(s)	187
MspI	CCGG	1 cut(s)	801
MspR9I	CCNGG	2 cut(s)	189, 512
MvaI	CCWGG	2 cut(s)	189, 512
MvnI	CGCG	1 cut(s)	330
MwoI	GCNNNNNNNGC	1 cut(s)	920
NcoI	CCATGG	1 cut(s)	337
NdeII	GATC	6 cut(s)	42, 70, 322, 372, 414, 648
NlaIII	CATG	6 cut(s)	200, 231, 341, 452, 815, 918
NlaIV	GGNNCC	2 cut(s)	7, 292
NmuCI	GTSAC	3 cut(s)	349, 754, 796
NsiI	ATGCAT	2 cut(s)	233, 916
NspI	RCATGY	1 cut(s)	918
NspV	TTCGAA	1 cut(s)	678
OliI	CACNNNNGTG	1 cut(s)	296
PagI	TCATGA	2 cut(s)	448, 811
PceI	AGGCCT	3 cut(s)	118, 147, 241
PdmI	GAANNNNTTC	1 cut(s)	549
PfeI	GAWTC	2 cut(s)	163, 808
PinAI	ACCGGT	1 cut(s)	800
PkrI	GCNGC	1 cut(s)	708
PleI	GAGTC	1 cut(s)	194
PpsI	GAGTC	1 cut(s)	194
PsiI	TTATAA	1 cut(s)	833
Psp6I	CCWGG	2 cut(s)	187, 510
PspGI	CCWGG	2 cut(s)	187, 510
PspN4I	GGNNCC	2 cut(s)	7, 292
RseI	CAYNNNNRTG	3 cut(s)	296, 513, 816
SatI	GCNGC	1 cut(s)	707
Sau3AI	GATC	6 cut(s)	42, 70, 322, 372, 414, 648
SchI	GAGTC	1 cut(s)	194
ScrFI	CCNGG	2 cut(s)	189, 512
SduI	GDGCHC	2 cut(s)	112, 633
SetI	ASST	8 cut(s)	86, 106, 282, 501, 595, 763, 856, 869
SfaNI	GCATC	2 cut(s)	493, 901
SfcI	CTRYAG	1 cut(s)	120
SfuI	TTCGAA	1 cut(s)	678
SmiMI	CAYNNNNRTG	3 cut(s)	296, 513, 816
Sse9I	AATT	8 cut(s)	133, 342, 488, 545, 586, 674, 714, 939
SseBI	AGGCCT	3 cut(s)	118, 147, 241
SsiI	CCGC	1 cut(s)	596
SspMI	CTAG	2 cut(s)	237, 849
StuI	AGGCCT	3 cut(s)	118, 147, 241
StyD4I	CCNGG	2 cut(s)	187, 510
StyI	CCWWGG	2 cut(s)	337, 581
TaaI	ACNGT	1 cut(s)	754
TaqI	TCGA	2 cut(s)	668, 678
TasI	AATT	8 cut(s)	133, 342, 488, 545, 586, 674, 714, 939
TfiI	GAWTC	2 cut(s)	163, 808
TscAI	CASTG	3 cut(s)	759, 801, 845
TseFI	GTSAC	3 cut(s)	349, 754, 796
TseI	GCWGC	1 cut(s)	706
Tsp45I	GTSAC	3 cut(s)	349, 754, 796
TspDTI	ATGAA	2 cut(s)	65, 800
TspGWI	ACGGA	2 cut(s)	65, 671
TspRI	CASTG	3 cut(s)	759, 801, 845
XagI	CCTNNNNNAGG	1 cut(s)	603
XapI	RAATTY	3 cut(s)	342, 586, 674
XbaI	TCTAGA	1 cut(s)	848
XceI	RCATGY	1 cut(s)	918
XmnI	GAANNNNTTC	1 cut(s)	549
XspI	CTAG	2 cut(s)	237, 849
Zsp2I	ATGCAT	2 cut(s)	233, 916

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.